Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493740 | XP_013459093.2 | 98.188 | 607 | 10 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493740 | sp|Q9FNQ0|VIP4_ARATH | 54.016 | 635 | 243 | 18 | 5 | 605 | 5 | 624 | 1.40e-152 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493740 | A0A396IKI1 | 98.188 | 607 | 10 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072420 | Msa0493740 | 0.811008 | 8.676366e-51 | -8.615850e-47 |
| Msa0398670 | Msa0493740 | 0.878888 | 1.949800e-69 | -8.615850e-47 |
| Msa0304730 | Msa0493740 | 0.812038 | 5.183804e-51 | -8.615850e-47 |
| Msa0351470 | Msa0493740 | 0.800868 | 1.177937e-48 | -8.615850e-47 |
| Msa0493740 | Msa0828590 | 0.804546 | 2.050877e-49 | -8.615850e-47 |
| Msa0493740 | Msa1031660 | 0.820628 | 6.203158e-53 | -8.615850e-47 |
| Msa0493740 | Msa1070720 | 0.824184 | 9.263238e-54 | -8.615850e-47 |
| Msa0493740 | Msa1213980 | 0.812065 | 5.113306e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493740 | MtrunA17_Chr3g0086581 | 98.188 | 607 | 10 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1196 |
| Msa0493740 | MtrunA17_Chr3g0086571 | 97.858 | 607 | 12 | 1 | 1 | 606 | 1 | 607 | 0.0 | 1192 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493740 | AT5G61150.2 | 54.186 | 633 | 243 | 18 | 5 | 605 | 5 | 622 | 4.91e-154 | 457 |
| Msa0493740 | AT5G61150.1 | 54.016 | 635 | 243 | 18 | 5 | 605 | 5 | 624 | 1.43e-153 | 456 |
Find 179 sgRNAs with CRISPR-Local
Find 621 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTGATCACTGTATTTCT+TGG | 0.161112 | 3_4:-19655605 | Msa0493740:three_prime_UTR |
| ACCTTTGTAACTGATGAATT+TGG | 0.177630 | 3_4:-19659249 | Msa0493740:CDS |
| CGATGGGTTGTTGGTTTCTT+AGG | 0.186028 | 3_4:+19656148 | None:intergenic |
| TGATGATGAAGAGGAGGATA+TGG | 0.211401 | 3_4:-19660040 | Msa0493740:CDS |
| GACTCTTCTCTCTCATCATC+TGG | 0.245899 | 3_4:+19657438 | None:intergenic |
| CAAAAGAGTAAGAATTTAAA+AGG | 0.255676 | 3_4:-19656217 | Msa0493740:CDS |
| AACGACATCCCTACGCTTAC+TGG | 0.260769 | 3_4:+19662992 | None:intergenic |
| AGTCTGATCTTTGTCTTCTC+TGG | 0.262897 | 3_4:+19660110 | None:intergenic |
| AATTCACCTTTCCATGTCTA+AGG | 0.291409 | 3_4:+19658319 | None:intergenic |
| AACACAAGGCAGACCTTTCC+TGG | 0.291986 | 3_4:+19659707 | None:intergenic |
| CCGGAAATTCGTGATGTATT+TGG | 0.297525 | 3_4:-19660069 | Msa0493740:CDS |
| CCAAATACATCACGAATTTC+CGG | 0.297709 | 3_4:+19660069 | None:intergenic |
| CAAAGATCAGACTCATGATT+TGG | 0.303405 | 3_4:-19660100 | Msa0493740:CDS |
| AGGCTGAAAGTCAGACTATC+AGG | 0.307554 | 3_4:-19657969 | Msa0493740:CDS |
| TGGATCAACTCCCATGATAT+TGG | 0.314016 | 3_4:+19659308 | None:intergenic |
| CCTCTGTATTCCCTGCTTGT+TGG | 0.322148 | 3_4:-19655645 | Msa0493740:three_prime_UTR |
| AGAATCAAACCCCTTCCTTT+TGG | 0.325587 | 3_4:+19656189 | None:intergenic |
| ACGCTGATTGTAATCATCTT+TGG | 0.335207 | 3_4:+19663022 | None:intergenic |
| TTTCTACGCTCTCTCTGTTT+GGG | 0.341598 | 3_4:+19663505 | None:intergenic |
| GGAAGCATTCAGTTATTGAT+TGG | 0.350831 | 3_4:-19658399 | Msa0493740:CDS |
| AGGAGGCGTCAACTTTCTCC+TGG | 0.360444 | 3_4:-19657886 | Msa0493740:CDS |
| TGAAGGAGAAGTTGAGGGGC+AGG | 0.380719 | 3_4:-19663144 | Msa0493740:CDS |
| CGTCCACCTCCAGCTCTTCC+AGG | 0.386236 | 3_4:-19659725 | Msa0493740:CDS |
| GATGATGAAGAGGAGGATAT+GGG | 0.386378 | 3_4:-19660039 | Msa0493740:CDS |
| AGAAGTTGAGGGGCAGGGAG+AGG | 0.401701 | 3_4:-19663138 | Msa0493740:CDS |
| GTCATTCGGCGATGGGTTGT+TGG | 0.403588 | 3_4:+19656139 | None:intergenic |
| GACCTACGAGGGATGCTCTT+TGG | 0.404064 | 3_4:+19657507 | None:intergenic |
| GTTTAAAGTTTCCAATATCA+TGG | 0.404176 | 3_4:-19659319 | Msa0493740:CDS |
| AGTGAAGGTGAGAGAGAGGT+TGG | 0.405162 | 3_4:-19663098 | Msa0493740:CDS |
| CTTACAGATGTTGTGCCATC+AGG | 0.408963 | 3_4:+19659168 | None:intergenic |
| GCAGGATGAAGGAGAGGGAG+GGG | 0.417436 | 3_4:-19663189 | Msa0493740:intron |
| TCATAATTCGTTTCTCTGCT+CGG | 0.419109 | 3_4:+19657632 | None:intergenic |
| CAAATACATCACGAATTTCC+GGG | 0.420870 | 3_4:+19660070 | None:intergenic |
| TTGAGGATTGGATTCATGTT+CGG | 0.429047 | 3_4:+19663399 | None:intergenic |
| GAAGCATTCAGTTATTGATT+GGG | 0.436645 | 3_4:-19658398 | Msa0493740:CDS |
| TACAGAATTGAGTTGAGGAT+TGG | 0.437265 | 3_4:+19663387 | None:intergenic |
| AAAGGCCTCGCTCTCGTATG+AGG | 0.438637 | 3_4:-19657383 | Msa0493740:CDS |
| GTCTGATCTTTGTCTTCTCT+GGG | 0.439102 | 3_4:+19660111 | None:intergenic |
| GATGAAGGAGAGGGAGGGGT+AGG | 0.441542 | 3_4:-19663185 | Msa0493740:CDS |
| GGAAGAAGAGAGTGAAGGTA+GGG | 0.445901 | 3_4:-19663063 | Msa0493740:CDS |
| TGGATCTGATGATGATGAAC+AGG | 0.450572 | 3_4:-19662964 | Msa0493740:CDS |
| TGGAAGAAGAGAGTGAAGGT+AGG | 0.450961 | 3_4:-19663064 | Msa0493740:CDS |
| AAAGCAATGCTCGCTTTGTA+AGG | 0.456005 | 3_4:-19658431 | Msa0493740:CDS |
| CTGGGTAACCCACTTGGTGC+CGG | 0.457697 | 3_4:+19657457 | None:intergenic |
| ACGAATTATGAATGCTAAGA+AGG | 0.462052 | 3_4:-19657620 | Msa0493740:intron |
| GAGGGTGAAGGAGAAGTTGA+GGG | 0.462675 | 3_4:-19663149 | Msa0493740:CDS |
| AGAAGAGAGTGAAGGTAGGG+GGG | 0.466996 | 3_4:-19663060 | Msa0493740:CDS |
| AGAGAGTGAAGGTGAGAGAG+AGG | 0.471012 | 3_4:-19663102 | Msa0493740:CDS |
| AAGTTCATCTTCTTCCTCCT+CGG | 0.471897 | 3_4:+19663426 | None:intergenic |
| AGAACAAGAAAATGATGCTT+CGG | 0.474694 | 3_4:-19657310 | Msa0493740:CDS |
| GAGTAAGAATTTAAAAGGTA+AGG | 0.475961 | 3_4:-19656212 | Msa0493740:CDS |
| CATCATCTGGGTAACCCACT+TGG | 0.477731 | 3_4:+19657451 | None:intergenic |
| ACATAATTGTCATTCGGCGA+TGG | 0.478658 | 3_4:+19656131 | None:intergenic |
| AAGGGGTTTGATTCTGATGA+AGG | 0.479724 | 3_4:-19656181 | Msa0493740:CDS |
| TACGCTCTCTCTGTTTGGGT+GGG | 0.484409 | 3_4:+19663509 | None:intergenic |
| GAAGAAGAGAGTGAAGGTAG+GGG | 0.484413 | 3_4:-19663062 | Msa0493740:CDS |
| CCTTGTCGTCGAATTCTCAT+CGG | 0.488466 | 3_4:-19658172 | Msa0493740:CDS |
| TCTTACTCGTAAGCGCGAAA+AGG | 0.491879 | 3_4:-19657935 | Msa0493740:CDS |
| ACTTGGGCCACCATTGGAGT+TGG | 0.492300 | 3_4:-19659759 | Msa0493740:CDS |
| CAGACCTTTCCTGGAAGAGC+TGG | 0.492331 | 3_4:+19659716 | None:intergenic |
| TTCATCAGCAAGTATATCCT+CGG | 0.493150 | 3_4:+19659838 | None:intergenic |
| ATTTAAAAGGTAAGGCCAAA+AGG | 0.493936 | 3_4:-19656204 | Msa0493740:CDS |
| AGAGGGTGAAGGAGAAGTTG+AGG | 0.494925 | 3_4:-19663150 | Msa0493740:CDS |
| AAGAAGAGAGTGAAGGTAGG+GGG | 0.497291 | 3_4:-19663061 | Msa0493740:CDS |
| CAGATGATGCAGAATCTCTT+CGG | 0.498212 | 3_4:-19663457 | Msa0493740:CDS |
| CATAATTGTCATTCGGCGAT+GGG | 0.499895 | 3_4:+19656132 | None:intergenic |
| CGTAGGGATGTCGTTGAAAG+TGG | 0.500557 | 3_4:-19662984 | Msa0493740:CDS |
| TGGGTAACCCACTTGGTGCC+GGG | 0.501264 | 3_4:+19657458 | None:intergenic |
| TTTAGAGGATGCTTTGGATG+AGG | 0.502707 | 3_4:-19657860 | Msa0493740:intron |
| CTACGCTCTCTCTGTTTGGG+TGG | 0.502714 | 3_4:+19663508 | None:intergenic |
| TAAGCCACTTGGGCCACCAT+TGG | 0.504404 | 3_4:-19659765 | Msa0493740:CDS |
| TTGCAGGATGAAGGAGAGGG+AGG | 0.504951 | 3_4:-19663191 | Msa0493740:intron |
| TATGGGGTATGCAGCTCAGC+AGG | 0.507648 | 3_4:-19660022 | Msa0493740:CDS |
| GTTGTTGGTTTCTTAGGAGG+AGG | 0.507805 | 3_4:+19656154 | None:intergenic |
| TTTAAAGTTTCCAATATCAT+GGG | 0.510569 | 3_4:-19659318 | Msa0493740:CDS |
| GGGTGGGAAAAGTGAAGAGA+AGG | 0.510570 | 3_4:+19663525 | None:intergenic |
| AGATATCCTGCGGAGGAGGA+AGG | 0.511585 | 3_4:-19659884 | Msa0493740:CDS |
| TGCAGGATGAAGGAGAGGGA+GGG | 0.511951 | 3_4:-19663190 | Msa0493740:intron |
| TCCAAATTCATCAGTTACAA+AGG | 0.512124 | 3_4:+19659248 | None:intergenic |
| CGCTTTGTAAGGTGGTCTGA+TGG | 0.512150 | 3_4:-19658420 | Msa0493740:CDS |
| GGTAGGGCAAGAAGTTGAAG+AGG | 0.514949 | 3_4:-19663168 | Msa0493740:CDS |
| AAAGATGTGCTTGATCATGC+TGG | 0.515881 | 3_4:+19658343 | None:intergenic |
| GATATCCTGCGGAGGAGGAA+GGG | 0.517353 | 3_4:-19659883 | Msa0493740:CDS |
| AAACAAGAAGCGCATACGCT+TGG | 0.520008 | 3_4:-19659226 | Msa0493740:CDS |
| ATGAAGGAGAGGGAGGGGTA+GGG | 0.523344 | 3_4:-19663184 | Msa0493740:CDS |
| AGAGGTTGGTGATCAGAGAG+TGG | 0.525201 | 3_4:-19663084 | Msa0493740:CDS |
| GAAGGAGAAGTTGAGGGGCA+GGG | 0.526782 | 3_4:-19663143 | Msa0493740:CDS |
| ACCTCCAGCTCTTCCAGGAA+AGG | 0.528540 | 3_4:-19659720 | Msa0493740:intron |
| ACTCTTCTCTCTCATCATCT+GGG | 0.528829 | 3_4:+19657439 | None:intergenic |
| AGTTGACGCCTCCTCTCAGT+TGG | 0.530113 | 3_4:+19657895 | None:intergenic |
| AAAGGTAAGGCCAAAAGGAA+GGG | 0.530659 | 3_4:-19656199 | Msa0493740:CDS |
| TGTCAGACATAATTGTCATT+CGG | 0.533240 | 3_4:+19656125 | None:intergenic |
| TCATGATTTGGATTCTGCCC+CGG | 0.534074 | 3_4:-19660088 | Msa0493740:CDS |
| TGGGTTGTTGGTTTCTTAGG+AGG | 0.534824 | 3_4:+19656151 | None:intergenic |
| GTAGAGATATCCTGCGGAGG+AGG | 0.536010 | 3_4:-19659888 | Msa0493740:intron |
| AACTCCAATGGTGGCCCAAG+TGG | 0.536324 | 3_4:+19659761 | None:intergenic |
| AGAATTCGACGACAAGGAAG+AGG | 0.537175 | 3_4:+19658178 | None:intergenic |
| AAAAGGTAAGGCCAAAAGGA+AGG | 0.537691 | 3_4:-19656200 | Msa0493740:CDS |
| TAACTGCAATTGTTGACTCA+AGG | 0.540824 | 3_4:-19658145 | Msa0493740:CDS |
| TGAGGCAGAATATGAGGATG+AGG | 0.541830 | 3_4:-19657349 | Msa0493740:CDS |
| GGTGGGAAAAGTGAAGAGAA+GGG | 0.544645 | 3_4:+19663526 | None:intergenic |
| AGTTCTTGACGTATCTGAGC+AGG | 0.545394 | 3_4:-19658370 | Msa0493740:CDS |
| ATGATGAAGAGGAGGATATG+GGG | 0.546074 | 3_4:-19660038 | Msa0493740:CDS |
| AGAACAATATTGTACGTTGG+AGG | 0.547091 | 3_4:-19659203 | Msa0493740:CDS |
| GGAGGCGTCAACTTTCTCCT+GGG | 0.547641 | 3_4:-19657885 | Msa0493740:CDS |
| GGTATTGCAGGATGAAGGAG+AGG | 0.549776 | 3_4:-19663195 | Msa0493740:intron |
| TTTCCTGGAAGAGCTGGAGG+TGG | 0.550435 | 3_4:+19659722 | None:intergenic |
| CAAGCAGGGAATACAGAGGA+GGG | 0.550831 | 3_4:+19655649 | None:intergenic |
| GAGACAAAATACCAACAAGC+AGG | 0.552777 | 3_4:+19655634 | None:intergenic |
| CACAAGTTCTAAGCTCAAAA+CGG | 0.552860 | 3_4:-19663561 | Msa0493740:five_prime_UTR |
| AGAAAATGATGCTTCGGATG+AGG | 0.553139 | 3_4:-19657304 | Msa0493740:CDS |
| AAGGTAAGGCCAAAAGGAAG+GGG | 0.555300 | 3_4:-19656198 | Msa0493740:CDS |
| CAAGAAGTTGAAGAGGGTGA+AGG | 0.556138 | 3_4:-19663161 | Msa0493740:CDS |
| TGATTCTGAGGCAGAATATG+AGG | 0.556925 | 3_4:-19657355 | Msa0493740:CDS |
| TAGCTCCCTTCCTCCTCCGC+AGG | 0.559719 | 3_4:+19659878 | None:intergenic |
| TCCCACCAGCAAAATCCTCC+CGG | 0.563107 | 3_4:-19657476 | Msa0493740:CDS |
| AATCTTACAGAATTGAGTTG+AGG | 0.563407 | 3_4:+19663382 | None:intergenic |
| ACCTTTCCTGGAAGAGCTGG+AGG | 0.563803 | 3_4:+19659719 | None:intergenic |
| AAGACGATGAGGAAGAAGAA+AGG | 0.567710 | 3_4:-19657401 | Msa0493740:CDS |
| GAAGAAGAAGCAGAGAGTGA+AGG | 0.568085 | 3_4:-19663113 | Msa0493740:CDS |
| AGCAGGGAATACAGAGGAGG+GGG | 0.570578 | 3_4:+19655651 | None:intergenic |
| GTAAGCGCGAAAAGGTGAAT+CGG | 0.570993 | 3_4:-19657927 | Msa0493740:CDS |
| AAAGTAGTTATCATACATGT+CGG | 0.579698 | 3_4:-19655494 | Msa0493740:three_prime_UTR |
| TCATCAGCAAGTATATCCTC+GGG | 0.580662 | 3_4:+19659839 | None:intergenic |
| AAAACTAAAGATAAGCCACT+TGG | 0.583846 | 3_4:-19659776 | Msa0493740:CDS |
| AGAGCATCAGTATGAATCAG+AGG | 0.587246 | 3_4:-19659816 | Msa0493740:CDS |
| TGTTGACTCAAGGCAAAGGA+AGG | 0.588843 | 3_4:-19658135 | Msa0493740:CDS |
| GTATTGCAGGATGAAGGAGA+GGG | 0.588913 | 3_4:-19663194 | Msa0493740:intron |
| TAGAACACAGCGTCACTATG+AGG | 0.593921 | 3_4:-19657674 | Msa0493740:CDS |
| AGGGTGAAGGAGAAGTTGAG+GGG | 0.595987 | 3_4:-19663148 | Msa0493740:CDS |
| AGAGTGGAAGAAGAGAGTGA+AGG | 0.597932 | 3_4:-19663068 | Msa0493740:CDS |
| GTAGGGCAAGAAGTTGAAGA+GGG | 0.600226 | 3_4:-19663167 | Msa0493740:CDS |
| AAGGCCTCGCTCTCGTATGA+GGG | 0.604558 | 3_4:-19657382 | Msa0493740:CDS |
| AGAGCTGGAGGTGGACGTAG+TGG | 0.608598 | 3_4:+19659731 | None:intergenic |
| AAAATCCTCCCGGCACCAAG+TGG | 0.609142 | 3_4:-19657466 | Msa0493740:CDS |
| AGTGGAATCTCCAACTCCAA+TGG | 0.611411 | 3_4:+19659749 | None:intergenic |
| CAGGGAATTCTGCAATCACA+AGG | 0.612303 | 3_4:-19658230 | Msa0493740:CDS |
| GCAATGCTCGCTTTGTAAGG+TGG | 0.615936 | 3_4:-19658428 | Msa0493740:CDS |
| TTTATGGAATTCTAGTCACA+GGG | 0.616797 | 3_4:-19657531 | Msa0493740:intron |
| AAGATGTGCTTGATCATGCT+GGG | 0.617257 | 3_4:+19658344 | None:intergenic |
| TATGAGGGATGATGATTCTG+AGG | 0.620873 | 3_4:-19657367 | Msa0493740:CDS |
| GTGTCGTTACCAGTAAGCGT+AGG | 0.621779 | 3_4:-19663001 | Msa0493740:CDS |
| TGTCGTTACCAGTAAGCGTA+GGG | 0.622629 | 3_4:-19663000 | Msa0493740:CDS |
| TGAAAAGAGCTTGAGACCCG+AGG | 0.623003 | 3_4:-19659855 | Msa0493740:CDS |
| TTCGGATGAGGACGAAGATG+AGG | 0.623505 | 3_4:-19657292 | Msa0493740:intron |
| TTATAACTTATAATACATGC+CGG | 0.624826 | 3_4:-19655440 | Msa0493740:three_prime_UTR |
| TGGAGAACAATATTGTACGT+TGG | 0.625363 | 3_4:-19659206 | Msa0493740:CDS |
| CAATTGTTGACTCAAGGCAA+AGG | 0.626176 | 3_4:-19658139 | Msa0493740:CDS |
| AATCACAAGGACAGCTATCG+AGG | 0.634431 | 3_4:-19658217 | Msa0493740:CDS |
| AAATCCTCCCGGCACCAAGT+GGG | 0.639942 | 3_4:-19657465 | Msa0493740:CDS |
| GGAATCTCCAACTCCAATGG+TGG | 0.639997 | 3_4:+19659752 | None:intergenic |
| GGCTGAAAGTCAGACTATCA+GGG | 0.640361 | 3_4:-19657968 | Msa0493740:CDS |
| GAATTCGACGACAAGGAAGA+GGG | 0.641254 | 3_4:+19658179 | None:intergenic |
| AGGAAAGTCACAAATCCTGA+TGG | 0.643610 | 3_4:-19659183 | Msa0493740:CDS |
| GGAAATATGCTCCAACTGAG+AGG | 0.643716 | 3_4:-19657906 | Msa0493740:CDS |
| AAACTAAAGATAAGCCACTT+GGG | 0.644064 | 3_4:-19659775 | Msa0493740:CDS |
| ACAAGCAGGGAATACAGAGG+AGG | 0.644875 | 3_4:+19655648 | None:intergenic |
| AGACAAAATACCAACAAGCA+GGG | 0.651087 | 3_4:+19655635 | None:intergenic |
| CCGATGAGAATTCGACGACA+AGG | 0.652415 | 3_4:+19658172 | None:intergenic |
| GCATCAGTATGAATCAGAGG+AGG | 0.652612 | 3_4:-19659813 | Msa0493740:CDS |
| TACAGACATTGATCCTGAGA+GGG | 0.652796 | 3_4:-19658090 | Msa0493740:CDS |
| AATATGCTCCAACTGAGAGG+AGG | 0.659533 | 3_4:-19657903 | Msa0493740:CDS |
| ATATGAAACTGAAGACGATG+AGG | 0.660309 | 3_4:-19657412 | Msa0493740:CDS |
| TTACAGACATTGATCCTGAG+AGG | 0.665584 | 3_4:-19658091 | Msa0493740:CDS |
| AAATACATCACGAATTTCCG+GGG | 0.669442 | 3_4:+19660071 | None:intergenic |
| TCATCCCTCATACGAGAGCG+AGG | 0.670421 | 3_4:+19657378 | None:intergenic |
| CTTACGAGTAAGAAGTACGT+TGG | 0.673929 | 3_4:+19657945 | None:intergenic |
| AACACAGCGTCACTATGAGG+AGG | 0.677188 | 3_4:-19657671 | Msa0493740:CDS |
| AAGCAGGGAATACAGAGGAG+GGG | 0.680526 | 3_4:+19655650 | None:intergenic |
| GTAACCCACTTGGTGCCGGG+AGG | 0.688990 | 3_4:+19657461 | None:intergenic |
| GACCAAAGAGCATCCCTCGT+AGG | 0.690217 | 3_4:-19657509 | Msa0493740:CDS |
| CCTGTTGTAGAGATATCCTG+CGG | 0.694729 | 3_4:-19659894 | Msa0493740:intron |
| GTTGTAGAGATATCCTGCGG+AGG | 0.703265 | 3_4:-19659891 | Msa0493740:intron |
| CAGCAGCTAGAAGAAGCCTG+AGG | 0.712548 | 3_4:-19662932 | Msa0493740:intron |
| GGGAGGAACGATGACCTACG+AGG | 0.713672 | 3_4:+19657495 | None:intergenic |
| CTTCGGAGATCAATCCGAGG+AGG | 0.714867 | 3_4:-19663440 | Msa0493740:CDS |
| TCTCTTCGGAGATCAATCCG+AGG | 0.735019 | 3_4:-19663443 | Msa0493740:CDS |
| GGAGGAACGATGACCTACGA+GGG | 0.757117 | 3_4:+19657496 | None:intergenic |
| CCAACAAGCAGGGAATACAG+AGG | 0.758116 | 3_4:+19655645 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATTATACGAATT+TGG | + | chr3_4:19656406-19656425 | None:intergenic | 10.0% |
| !! | ATAATTAAAAGGAATAAGAA+AGG | + | chr3_4:19657959-19657978 | None:intergenic | 15.0% |
| !! | AATCATATTAAAAACTTCTA+GGG | + | chr3_4:19658502-19658521 | None:intergenic | 15.0% |
| !! | AAATCATATTAAAAACTTCT+AGG | + | chr3_4:19658503-19658522 | None:intergenic | 15.0% |
| !! | TTTGGAAAAAAAAAATATAG+TGG | - | chr3_4:19658948-19658967 | Msa0493740:intron | 15.0% |
| !! | TTGGAAAAAAAAAATATAGT+GGG | - | chr3_4:19658949-19658968 | Msa0493740:intron | 15.0% |
| !! | TATATGTTATTGTTAAAATG+AGG | - | chr3_4:19659416-19659435 | Msa0493740:intron | 15.0% |
| !!! | TAATTTTAGATCTTTGTTAA+TGG | - | chr3_4:19660374-19660393 | Msa0493740:intron | 15.0% |
| !! | AAAATATTTATCTTCAACTA+TGG | - | chr3_4:19661838-19661857 | Msa0493740:intron | 15.0% |
| !! | CAATTAAACAAAGATAAAAT+TGG | + | chr3_4:19661943-19661962 | None:intergenic | 15.0% |
| !!! | CAATTTTATCTTTGTTTAAT+TGG | - | chr3_4:19661941-19661960 | Msa0493740:intron | 15.0% |
| !! | AAATATCTGTACAAAATATT+TGG | + | chr3_4:19662077-19662096 | None:intergenic | 15.0% |
| !!! | AAATATTTTGTACAGATATT+TGG | - | chr3_4:19662076-19662095 | Msa0493740:intron | 15.0% |
| !! | GAAATGCAAAAAAAAAAAAA+AGG | + | chr3_4:19663158-19663177 | None:intergenic | 15.0% |
| !!! | TATTTTAAAATACCATCAAA+TGG | - | chr3_4:19663206-19663225 | Msa0493740:intron | 15.0% |
| !! | ATCGTATTGAAAATTTGAAA+TGG | - | chr3_4:19655859-19655878 | Msa0493740:intron | 20.0% |
| !!! | AATTTGAAATGGTGAATTTT+TGG | - | chr3_4:19655870-19655889 | Msa0493740:intron | 20.0% |
| !!! | AAATTTTACAATGAAATTGC+TGG | - | chr3_4:19656269-19656288 | Msa0493740:intron | 20.0% |
| !!! | CTGTTTTTTTATAATAAGAG+AGG | - | chr3_4:19657119-19657138 | Msa0493740:intron | 20.0% |
| !!! | TTTTTTTATAATAAGAGAGG+AGG | - | chr3_4:19657122-19657141 | Msa0493740:intron | 20.0% |
| !! | GAATTAGAGTAATCTTTATA+TGG | + | chr3_4:19657351-19657370 | None:intergenic | 20.0% |
| !!! | CTGTTTTTTAATAATAAGAG+AGG | + | chr3_4:19658013-19658032 | None:intergenic | 20.0% |
| !!! | ACTCAGAATTTTATTTTCTT+TGG | - | chr3_4:19658930-19658949 | Msa0493740:intron | 20.0% |
| !! | AACAATAACATATAGAACAT+AGG | + | chr3_4:19659410-19659429 | None:intergenic | 20.0% |
| !!! | GTGAATTTTGAAATGTTTAA+AGG | - | chr3_4:19659524-19659543 | Msa0493740:intron | 20.0% |
| !! | TTGTTAAATTCTCATCATTT+AGG | + | chr3_4:19659616-19659635 | None:intergenic | 20.0% |
| !!! | TTTAAAGTTTCCAATATCAT+GGG | - | chr3_4:19659768-19659787 | Msa0493740:CDS | 20.0% |
| !!! | AAGAAAGATTTGGAATTAAA+TGG | + | chr3_4:19660157-19660176 | None:intergenic | 20.0% |
| !! | TAATTCCAAATCTTTCTTAA+TGG | - | chr3_4:19660159-19660178 | Msa0493740:intron | 20.0% |
| !!! | TTAAATGCCATTTCATAATT+AGG | + | chr3_4:19660422-19660441 | None:intergenic | 20.0% |
| !! | AATATGTATTACTGTTGATA+TGG | - | chr3_4:19660440-19660459 | Msa0493740:intron | 20.0% |
| !! | GAAATTATTCTGATCTTAAA+AGG | + | chr3_4:19660581-19660600 | None:intergenic | 20.0% |
| !! | TTATGCATTAACATTAATGA+AGG | - | chr3_4:19661528-19661547 | Msa0493740:intron | 20.0% |
| !!! | CATTAATGAAGGTTATTTTA+TGG | - | chr3_4:19661539-19661558 | Msa0493740:intron | 20.0% |
| !!! | ATTGGCTATTTTTTAATTTC+CGG | - | chr3_4:19661959-19661978 | Msa0493740:intron | 20.0% |
| !!! | TTGTTTTCTTATTTTCTTAG+AGG | - | chr3_4:19662368-19662387 | Msa0493740:intron | 20.0% |
| !! | ATTAACAGAACAAAAAAACA+AGG | + | chr3_4:19662723-19662742 | None:intergenic | 20.0% |
| !!! | TTCTTCTTTACATATCTTTT+AGG | - | chr3_4:19662751-19662770 | Msa0493740:intron | 20.0% |
| !! | CAAAAGAGTAAGAATTTAAA+AGG | - | chr3_4:19662869-19662888 | Msa0493740:intron | 20.0% |
| !! | ATAAATCAGGTATTTATTCA+AGG | + | chr3_4:19663036-19663055 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAAAAGGAGGA+AGG | + | chr3_4:19663151-19663170 | None:intergenic | 20.0% |
| !! | ATGCAAAAAAAAAAAAAAGG+AGG | + | chr3_4:19663155-19663174 | None:intergenic | 20.0% |
| !! | TATATCTTGAAAACTTGTAA+CGG | + | chr3_4:19663180-19663199 | None:intergenic | 20.0% |
| !! | TTATAACTTATAATACATGC+CGG | - | chr3_4:19663646-19663665 | Msa0493740:five_prime_UTR | 20.0% |
| !!! | TTTTTTTTGTCTTTGAGAAG+AGG | - | chr3_4:19655484-19655503 | Msa0493740:three_prime_UTR | 25.0% |
| !! | TATTCCTTTGTTTATGCATT+TGG | - | chr3_4:19655833-19655852 | Msa0493740:intron | 25.0% |
| ! | AAAAAGAAAAAAACTACCTC+AGG | + | chr3_4:19656173-19656192 | None:intergenic | 25.0% |
| ! | TCATTAATTTACCACATTGT+TGG | - | chr3_4:19656211-19656230 | Msa0493740:CDS | 25.0% |
| ! | CATTAATTTACCACATTGTT+GGG | - | chr3_4:19656212-19656231 | Msa0493740:CDS | 25.0% |
| !!! | GCTGTTTTGATTAAGTTTTT+TGG | - | chr3_4:19656240-19656259 | Msa0493740:intron | 25.0% |
| !!! | TTTATTTCTAAGAAACCTAG+TGG | + | chr3_4:19656562-19656581 | None:intergenic | 25.0% |
| !! | TTCAACTCAATTCTTTTAGA+TGG | - | chr3_4:19656650-19656669 | Msa0493740:intron | 25.0% |
| !! | TCAACTCAATTCTTTTAGAT+GGG | - | chr3_4:19656651-19656670 | Msa0493740:intron | 25.0% |
| ! | ATAAGTAAAAGGTCTAAGAA+AGG | - | chr3_4:19657175-19657194 | Msa0493740:intron | 25.0% |
| !!! | AAAATAATTGAGTTGACACT+TGG | - | chr3_4:19657423-19657442 | Msa0493740:CDS | 25.0% |
| !!! | CACAAAAATAATTGAGTTGA+AGG | + | chr3_4:19657419-19657438 | None:intergenic | 25.0% |
| ! | AAAGGAATAAGAAAGGAATT+GGG | + | chr3_4:19657952-19657971 | None:intergenic | 25.0% |
| ! | AAAAGGAATAAGAAAGGAAT+TGG | + | chr3_4:19657953-19657972 | None:intergenic | 25.0% |
| !!! | ATAATAGAATCGGTTACTTT+TGG | + | chr3_4:19658308-19658327 | None:intergenic | 25.0% |
| ! | TTCTCATGGAATAATAGAAT+CGG | + | chr3_4:19658318-19658337 | None:intergenic | 25.0% |
| !! | AAATTTGCATGTTTTTCTCA+TGG | + | chr3_4:19658332-19658351 | None:intergenic | 25.0% |
| ! | TAGATATTATGAATTCCCAA+GGG | + | chr3_4:19658630-19658649 | None:intergenic | 25.0% |
| ! | GTAATGATTATATCTATGTC+CGG | - | chr3_4:19658742-19658761 | Msa0493740:intron | 25.0% |
| !! | TCATTATTTATTTGATGGGT+TGG | - | chr3_4:19658765-19658784 | Msa0493740:intron | 25.0% |
| ! | AAATAAAATTCTGAGTCTCA+AGG | + | chr3_4:19658926-19658945 | None:intergenic | 25.0% |
| ! | TTGAGAAATTTCTGATGTTA+TGG | - | chr3_4:19659577-19659596 | Msa0493740:intron | 25.0% |
| ! | TGATGAGAATTTAACAAGTT+TGG | - | chr3_4:19659619-19659638 | Msa0493740:intron | 25.0% |
| ! | AATGTGTTCTATTTGTAGTT+AGG | + | chr3_4:19659692-19659711 | None:intergenic | 25.0% |
| !! | GTTTAAAGTTTCCAATATCA+TGG | - | chr3_4:19659767-19659786 | Msa0493740:CDS | 25.0% |
| !!! | TCATATGTTTTAGGATCAAA+TGG | + | chr3_4:19659807-19659826 | None:intergenic | 25.0% |
| !! | TCTTCTTCTTCATATGTTTT+AGG | + | chr3_4:19659816-19659835 | None:intergenic | 25.0% |
| !! | TATTACAACTAAGAGTGTAA+AGG | + | chr3_4:19660031-19660050 | None:intergenic | 25.0% |
| ! | CTTTAAATATGATTCATGAG+AGG | + | chr3_4:19660344-19660363 | None:intergenic | 25.0% |
| ! | GAAATAGCCTAATTATGAAA+TGG | - | chr3_4:19660412-19660431 | Msa0493740:intron | 25.0% |
| ! | AAAAAATCTTGTTCATGATC+AGG | - | chr3_4:19660629-19660648 | Msa0493740:intron | 25.0% |
| ! | TTTGGATGAGGTATAAATTT+AGG | - | chr3_4:19661238-19661257 | Msa0493740:intron | 25.0% |
| ! | TTGGATGAGGTATAAATTTA+GGG | - | chr3_4:19661239-19661258 | Msa0493740:intron | 25.0% |
| !!! | AAAGGAGCATTGATAAATAA+TGG | + | chr3_4:19661356-19661375 | None:intergenic | 25.0% |
| !!! | GGTATTATTATTTTGTCTCT+AGG | - | chr3_4:19661487-19661506 | Msa0493740:intron | 25.0% |
| ! | AACAGTCAATAATAGGTATT+GGG | + | chr3_4:19662467-19662486 | None:intergenic | 25.0% |
| ! | AGTTTACCAATTCACTTTAA+AGG | + | chr3_4:19662526-19662545 | None:intergenic | 25.0% |
| ! | AAATGTTAAGAGCAATATTC+AGG | + | chr3_4:19662607-19662626 | None:intergenic | 25.0% |
| !! | ACATTTCCATTTTGTTCATT+TGG | - | chr3_4:19662621-19662640 | Msa0493740:intron | 25.0% |
| !! | CATTTCCATTTTGTTCATTT+GGG | - | chr3_4:19662622-19662641 | Msa0493740:intron | 25.0% |
| ! | AAAAAAACAAGGATAGTGTT+AGG | + | chr3_4:19662712-19662731 | None:intergenic | 25.0% |
| ! | GAGTAAGAATTTAAAAGGTA+AGG | - | chr3_4:19662874-19662893 | Msa0493740:intron | 25.0% |
| ! | GAAAATGAAAATCTGACTTA+CGG | + | chr3_4:19663005-19663024 | None:intergenic | 25.0% |
| ! | AAAGTAGTTATCATACATGT+CGG | - | chr3_4:19663592-19663611 | Msa0493740:five_prime_UTR | 25.0% |
| !! | GTTTTCAACACTTTATATTC+CGG | + | chr3_4:19663668-19663687 | None:intergenic | 25.0% |
| ! | AATCTTACAGAATTGAGTTG+AGG | + | chr3_4:19655707-19655726 | None:intergenic | 30.0% |
| TCTTCCAAATGCATAAACAA+AGG | + | chr3_4:19655840-19655859 | None:intergenic | 30.0% | |
| !!! | TTTGATTAAGTTTTTTGGCG+CGG | - | chr3_4:19656245-19656264 | Msa0493740:intron | 30.0% |
| TCTACACAACTAATAAAACC+CGG | + | chr3_4:19656327-19656346 | None:intergenic | 30.0% | |
| TCATGTAAGTACAACTTAGT+TGG | - | chr3_4:19656452-19656471 | Msa0493740:intron | 30.0% | |
| ATCTTAAGCTTGGAGAAATA+AGG | + | chr3_4:19656527-19656546 | None:intergenic | 30.0% | |
| ! | AAAGAGCATAAGAATCAAGA+AGG | + | chr3_4:19656602-19656621 | None:intergenic | 30.0% |
| TTCTCGAGGAATAATAGAAT+CGG | - | chr3_4:19656797-19656816 | Msa0493740:intron | 30.0% | |
| !! | ATAATAGAATCGGCTACTTT+TGG | - | chr3_4:19656807-19656826 | Msa0493740:intron | 30.0% |
| ! | TGCAAGTTAATTTTTCCTGA+TGG | - | chr3_4:19656989-19657008 | Msa0493740:intron | 30.0% |
| AAAAGGTCTAAGAAAGGAAT+TGG | - | chr3_4:19657181-19657200 | Msa0493740:intron | 30.0% | |
| AAAGGTCTAAGAAAGGAATT+GGG | - | chr3_4:19657182-19657201 | Msa0493740:intron | 30.0% | |
| !! | GAGGACTCTTTATTTCTAAA+AGG | + | chr3_4:19657600-19657619 | None:intergenic | 30.0% |
| TTTAGAAATAAAGAGTCCTC+TGG | - | chr3_4:19657600-19657619 | Msa0493740:intron | 30.0% | |
| ATTAAAAAACAGCAGTGAAC+TGG | - | chr3_4:19658021-19658040 | Msa0493740:intron | 30.0% | |
| !!! | TGCAAGTTATTTTTTCCTGA+TGG | + | chr3_4:19658132-19658151 | None:intergenic | 30.0% |
| AGATATTATGAATTCCCAAG+GGG | + | chr3_4:19658629-19658648 | None:intergenic | 30.0% | |
| GTAGATATTATGAATTCCCA+AGG | + | chr3_4:19658631-19658650 | None:intergenic | 30.0% | |
| !! | TTTGTCACTGCAATTGATTT+TGG | - | chr3_4:19658706-19658725 | Msa0493740:intron | 30.0% |
| TCCGGTCATTATTTATTTGA+TGG | - | chr3_4:19658760-19658779 | Msa0493740:intron | 30.0% | |
| CCCATCAAATAAATAATGAC+CGG | + | chr3_4:19658764-19658783 | None:intergenic | 30.0% | |
| CCGGTCATTATTTATTTGAT+GGG | - | chr3_4:19658761-19658780 | Msa0493740:intron | 30.0% | |
| TCTTAAACTAGATGACCAAA+TGG | - | chr3_4:19658846-19658865 | Msa0493740:intron | 30.0% | |
| !! | GTCATTTTCTATGTTCCATT+TGG | + | chr3_4:19658864-19658883 | None:intergenic | 30.0% |
| AAAACTAAAGATAAGCCACT+TGG | - | chr3_4:19659310-19659329 | Msa0493740:CDS | 30.0% | |
| AAACTAAAGATAAGCCACTT+GGG | - | chr3_4:19659311-19659330 | Msa0493740:CDS | 30.0% | |
| GAACACCAACATATCTTTAA+GGG | - | chr3_4:19659546-19659565 | Msa0493740:intron | 30.0% | |
| AACTTCCCTTAAAGATATGT+TGG | + | chr3_4:19659554-19659573 | None:intergenic | 30.0% | |
| GAAATTTCTGATGTTATGGT+TGG | - | chr3_4:19659581-19659600 | Msa0493740:intron | 30.0% | |
| ! | ACGTTATGTTGAGTAGATTT+TGG | - | chr3_4:19659654-19659673 | Msa0493740:intron | 30.0% |
| !! | GAGTAGATTTTGGCATATAT+TGG | - | chr3_4:19659664-19659683 | Msa0493740:intron | 30.0% |
| !!! | GTTTTAGGATCAAATGGTTT+TGG | + | chr3_4:19659801-19659820 | None:intergenic | 30.0% |
| ACCTTTGTAACTGATGAATT+TGG | - | chr3_4:19659837-19659856 | Msa0493740:CDS | 30.0% | |
| TCCAAATTCATCAGTTACAA+AGG | + | chr3_4:19659841-19659860 | None:intergenic | 30.0% | |
| ! | TTTCCTTCTTTTACATCCAT+GGG | - | chr3_4:19659996-19660015 | Msa0493740:intron | 30.0% |
| AAATGGTTTAAATGTAGACG+TGG | + | chr3_4:19660140-19660159 | None:intergenic | 30.0% | |
| CCAAACCATTAAGAAAGATT+TGG | + | chr3_4:19660167-19660186 | None:intergenic | 30.0% | |
| CCAAATCTTTCTTAATGGTT+TGG | - | chr3_4:19660164-19660183 | Msa0493740:intron | 30.0% | |
| ! | ATTCTTCTCCCTTTTACTAA+TGG | - | chr3_4:19660204-19660223 | Msa0493740:intron | 30.0% |
| AGACCAAACCATTAGTAAAA+GGG | + | chr3_4:19660215-19660234 | None:intergenic | 30.0% | |
| TAGACCAAACCATTAGTAAA+AGG | + | chr3_4:19660216-19660235 | None:intergenic | 30.0% | |
| !!! | CTGTTTTTGAGTAAGAGTAT+TGG | - | chr3_4:19660511-19660530 | Msa0493740:intron | 30.0% |
| !! | AGTATTGGCAAAATGAGTTA+TGG | - | chr3_4:19660526-19660545 | Msa0493740:intron | 30.0% |
| ! | GTATTGGCAAAATGAGTTAT+GGG | - | chr3_4:19660527-19660546 | Msa0493740:intron | 30.0% |
| ! | GAAGCATTCAGTTATTGATT+GGG | - | chr3_4:19660688-19660707 | Msa0493740:intron | 30.0% |
| GGTGAATTTCATTATTCTCA+TGG | - | chr3_4:19660782-19660801 | Msa0493740:intron | 30.0% | |
| ! | GATTTACTATTTCTCCTCAA+TGG | - | chr3_4:19660815-19660834 | Msa0493740:intron | 30.0% |
| GGAAAAAGAAGAAAAGGAAA+AGG | - | chr3_4:19661017-19661036 | Msa0493740:intron | 30.0% | |
| TAAAAGACAATAGTGTCTCT+AGG | + | chr3_4:19661272-19661291 | None:intergenic | 30.0% | |
| !! | CATTTGCTGCAATATTTTCT+AGG | - | chr3_4:19661301-19661320 | Msa0493740:intron | 30.0% |
| ACGAATTATGAATGCTAAGA+AGG | - | chr3_4:19661466-19661485 | Msa0493740:intron | 30.0% | |
| ! | TTTTATGGAATTCTAGTCAC+AGG | - | chr3_4:19661554-19661573 | Msa0493740:intron | 30.0% |
| TTTATGGAATTCTAGTCACA+GGG | - | chr3_4:19661555-19661574 | Msa0493740:intron | 30.0% | |
| AGAACAAGAAAATGATGCTT+CGG | - | chr3_4:19661776-19661795 | Msa0493740:intron | 30.0% | |
| TGAACCACAATAAATGGTAA+AGG | + | chr3_4:19661914-19661933 | None:intergenic | 30.0% | |
| TTGTTGTGAACCACAATAAA+TGG | + | chr3_4:19661920-19661939 | None:intergenic | 30.0% | |
| ! | ATGTGTGCAATATTTTGCAT+AGG | - | chr3_4:19662016-19662035 | Msa0493740:intron | 30.0% |
| GCAATCAAATGTTAATGGTT+TGG | + | chr3_4:19662188-19662207 | None:intergenic | 30.0% | |
| AAGCAGCAATCAAATGTTAA+TGG | + | chr3_4:19662193-19662212 | None:intergenic | 30.0% | |
| ! | TTAACATTTGATTGCTGCTT+AGG | - | chr3_4:19662193-19662212 | Msa0493740:intron | 30.0% |
| TGCTTAGGATTCAAAAGAAA+GGG | - | chr3_4:19662208-19662227 | Msa0493740:intron | 30.0% | |
| !! | AATAATGATTAGGTTGGTTC+TGG | + | chr3_4:19662241-19662260 | None:intergenic | 30.0% |
| AGAACCAACCTAATCATTAT+TGG | - | chr3_4:19662240-19662259 | Msa0493740:intron | 30.0% | |
| GAACCAACCTAATCATTATT+GGG | - | chr3_4:19662241-19662260 | Msa0493740:intron | 30.0% | |
| AAACCAACCCAATAATGATT+AGG | + | chr3_4:19662251-19662270 | None:intergenic | 30.0% | |
| !!! | TTATTGGGTTGGTTTTAGTT+AGG | - | chr3_4:19662256-19662275 | Msa0493740:intron | 30.0% |
| CAACAGTCAATAATAGGTAT+TGG | + | chr3_4:19662468-19662487 | None:intergenic | 30.0% | |
| TCAACACAACAGTCAATAAT+AGG | + | chr3_4:19662474-19662493 | None:intergenic | 30.0% | |
| !! | CTTTGTCCTTTAAAGTGAAT+TGG | - | chr3_4:19662517-19662536 | Msa0493740:intron | 30.0% |
| CAAAACCCAAATGAACAAAA+TGG | + | chr3_4:19662630-19662649 | None:intergenic | 30.0% | |
| ACAAAGTTTAACAAGGAACT+TGG | + | chr3_4:19662656-19662675 | None:intergenic | 30.0% | |
| ACTATTTCATGTTTACTTGC+AGG | - | chr3_4:19662838-19662857 | Msa0493740:intron | 30.0% | |
| CTATTTCATGTTTACTTGCA+GGG | - | chr3_4:19662839-19662858 | Msa0493740:intron | 30.0% | |
| ATTTAAAAGGTAAGGCCAAA+AGG | - | chr3_4:19662882-19662901 | Msa0493740:intron | 30.0% | |
| TGTCAGACATAATTGTCATT+CGG | + | chr3_4:19662964-19662983 | None:intergenic | 30.0% | |
| CAGGTATTTATTCAAGGTTA+AGG | + | chr3_4:19663030-19663049 | None:intergenic | 30.0% | |
| AGGACACATAATCATAAATC+AGG | + | chr3_4:19663049-19663068 | None:intergenic | 30.0% | |
| ! | CTTTTGCTAGCAAAAACATA+TGG | + | chr3_4:19663089-19663108 | None:intergenic | 30.0% |
| !! | TATGTTTTTGCTAGCAAAAG+AGG | - | chr3_4:19663089-19663108 | Msa0493740:CDS | 30.0% |
| !! | ATGTTTTTGCTAGCAAAAGA+GGG | - | chr3_4:19663090-19663109 | Msa0493740:CDS | 30.0% |
| AAAAAAAAAGGAGGAAGGAA+GGG | + | chr3_4:19663146-19663165 | None:intergenic | 30.0% | |
| AAAAAAAAAAGGAGGAAGGA+AGG | + | chr3_4:19663147-19663166 | None:intergenic | 30.0% | |
| TTTCAAACGTGAAAATCCTA+CGG | + | chr3_4:19663280-19663299 | None:intergenic | 30.0% | |
| ! | AAATTTACTGAGCTTTTCCA+GGG | - | chr3_4:19663297-19663316 | Msa0493740:intron | 30.0% |
| ! | ATGATTCAGGATTTTGCAAT+TGG | - | chr3_4:19663358-19663377 | Msa0493740:intron | 30.0% |
| ! | TTTTGCAATTGGAATTCAGA+AGG | - | chr3_4:19663369-19663388 | Msa0493740:intron | 30.0% |
| !! | CACAAGTTCTAAGCTCAAAA+CGG | - | chr3_4:19655525-19655544 | Msa0493740:three_prime_UTR | 35.0% |
| TTGAGGATTGGATTCATGTT+CGG | + | chr3_4:19655690-19655709 | None:intergenic | 35.0% | |
| !! | TACAGAATTGAGTTGAGGAT+TGG | + | chr3_4:19655702-19655721 | None:intergenic | 35.0% |
| !!! | TGGTGAATTTTTGGTATTGC+AGG | - | chr3_4:19655879-19655898 | Msa0493740:intron | 35.0% |
| !! | TTTTTGGTATTGCAGGATGA+AGG | - | chr3_4:19655886-19655905 | Msa0493740:intron | 35.0% |
| ! | ACGCTGATTGTAATCATCTT+TGG | + | chr3_4:19656067-19656086 | None:intergenic | 35.0% |
| AATTTACCACATTGTTGGGT+TGG | - | chr3_4:19656216-19656235 | Msa0493740:CDS | 35.0% | |
| TATGTGGTTGCTAATTGAAC+CGG | - | chr3_4:19656305-19656324 | Msa0493740:intron | 35.0% | |
| ! | ACTCAATTCTTTTAGATGGG+TGG | - | chr3_4:19656654-19656673 | Msa0493740:intron | 35.0% |
| ! | ATTCTTTTAGATGGGTGGAT+TGG | - | chr3_4:19656659-19656678 | Msa0493740:intron | 35.0% |
| ! | AAATTTGCACGTTTTTCTCG+AGG | - | chr3_4:19656783-19656802 | Msa0493740:intron | 35.0% |
| TTTCTCTTTCTCTCATTCTC+TGG | - | chr3_4:19656941-19656960 | Msa0493740:intron | 35.0% | |
| TTCTCTTTCTCTCATTCTCT+GGG | - | chr3_4:19656942-19656961 | Msa0493740:intron | 35.0% | |
| ! | AAACAGCAGTGAACTGATTT+GGG | + | chr3_4:19657105-19657124 | None:intergenic | 35.0% |
| AAAACAGCAGTGAACTGATT+TGG | + | chr3_4:19657106-19657125 | None:intergenic | 35.0% | |
| GTGTAGTTGGAAATGAAACT+GGG | + | chr3_4:19657272-19657291 | None:intergenic | 35.0% | |
| !!! | CACTTGGAATATTGGTTTTG+TGG | - | chr3_4:19657532-19657551 | Msa0493740:intron | 35.0% |
| ! | ATGCAAGAGCATAAGAATCA+AGG | + | chr3_4:19657635-19657654 | None:intergenic | 35.0% |
| CACTCTATACAATCTACACA+AGG | + | chr3_4:19657718-19657737 | None:intergenic | 35.0% | |
| ATTTCAATCCGACAAACTTC+AGG | - | chr3_4:19657791-19657810 | Msa0493740:intron | 35.0% | |
| ATACGTAACCTGAAGTTTGT+CGG | + | chr3_4:19657802-19657821 | None:intergenic | 35.0% | |
| AATACTTTCTTAAGCCCAGA+CGG | - | chr3_4:19657926-19657945 | Msa0493740:CDS | 35.0% | |
| GGAATTGAAAACGGCAATTA+GGG | + | chr3_4:19658091-19658110 | None:intergenic | 35.0% | |
| TGGAATTGAAAACGGCAATT+AGG | + | chr3_4:19658092-19658111 | None:intergenic | 35.0% | |
| GCAGCATATGGAATTGAAAA+CGG | + | chr3_4:19658100-19658119 | None:intergenic | 35.0% | |
| ATAAAGCGAGTTCTTGATGT+GGG | + | chr3_4:19658424-19658443 | None:intergenic | 35.0% | |
| GATATTATGAATTCCCAAGG+GGG | + | chr3_4:19658628-19658647 | None:intergenic | 35.0% | |
| CAGCAGATGAAGCATAAAAT+AGG | + | chr3_4:19658653-19658672 | None:intergenic | 35.0% | |
| AATTGTGCAAGCTGAATCTT+GGG | + | chr3_4:19658886-19658905 | None:intergenic | 35.0% | |
| AAATTGTGCAAGCTGAATCT+TGG | + | chr3_4:19658887-19658906 | None:intergenic | 35.0% | |
| CAAAGATCAGACTCATGATT+TGG | - | chr3_4:19658986-19659005 | Msa0493740:intron | 35.0% | |
| AAATACATCACGAATTTCCG+GGG | + | chr3_4:19659018-19659037 | None:intergenic | 35.0% | |
| CAAATACATCACGAATTTCC+GGG | + | chr3_4:19659019-19659038 | None:intergenic | 35.0% | |
| CCAAATACATCACGAATTTC+CGG | + | chr3_4:19659020-19659039 | None:intergenic | 35.0% | |
| !!! | TGGTGATTTTGATGATGAAG+AGG | - | chr3_4:19659037-19659056 | Msa0493740:intron | 35.0% |
| !!! | TGATTTTGATGATGAAGAGG+AGG | - | chr3_4:19659040-19659059 | Msa0493740:intron | 35.0% |
| TTCATCAGCAAGTATATCCT+CGG | + | chr3_4:19659251-19659270 | None:intergenic | 35.0% | |
| GGAACACCAACATATCTTTA+AGG | - | chr3_4:19659545-19659564 | Msa0493740:intron | 35.0% | |
| TGGAGAACAATATTGTACGT+TGG | - | chr3_4:19659880-19659899 | Msa0493740:CDS | 35.0% | |
| AGAACAATATTGTACGTTGG+AGG | - | chr3_4:19659883-19659902 | Msa0493740:CDS | 35.0% | |
| ! | CTTTCCTTCTTTTACATCCA+TGG | - | chr3_4:19659995-19660014 | Msa0493740:intron | 35.0% |
| !! | AAAGGCTTTATGGGATTTTG+TGG | + | chr3_4:19660059-19660078 | None:intergenic | 35.0% |
| ! | TCTCCCTTTTACTAATGGTT+TGG | - | chr3_4:19660209-19660228 | Msa0493740:intron | 35.0% |
| AACTTAAACCTTTCCCTGTT+AGG | - | chr3_4:19660282-19660301 | Msa0493740:intron | 35.0% | |
| TTTATTGACCAAGCCTAACA+GGG | + | chr3_4:19660298-19660317 | None:intergenic | 35.0% | |
| ATTTATTGACCAAGCCTAAC+AGG | + | chr3_4:19660299-19660318 | None:intergenic | 35.0% | |
| GCTTGGTCAATAAATGAATC+AGG | - | chr3_4:19660304-19660323 | Msa0493740:intron | 35.0% | |
| !! | GGAAGCATTCAGTTATTGAT+TGG | - | chr3_4:19660687-19660706 | Msa0493740:intron | 35.0% |
| ! | TCTTTTCCTTAGACATGGAA+AGG | - | chr3_4:19660761-19660780 | Msa0493740:intron | 35.0% |
| AATTCACCTTTCCATGTCTA+AGG | + | chr3_4:19660770-19660789 | None:intergenic | 35.0% | |
| ACTATGTGCACTTGTTTACA+GGG | - | chr3_4:19660838-19660857 | Msa0493740:intron | 35.0% | |
| !! | TAACTGCAATTGTTGACTCA+AGG | - | chr3_4:19660941-19660960 | Msa0493740:intron | 35.0% |
| ! | TTTTCTTCTTTTTCCCTCTC+AGG | + | chr3_4:19661012-19661031 | None:intergenic | 35.0% |
| TGAGAGGGAAAAAGAAGAAA+AGG | - | chr3_4:19661011-19661030 | Msa0493740:intron | 35.0% | |
| CCTGAAAATGATAGGGAAAT+TGG | + | chr3_4:19661100-19661119 | None:intergenic | 35.0% | |
| ! | CCAATTTCCCTATCATTTTC+AGG | - | chr3_4:19661097-19661116 | Msa0493740:intron | 35.0% |
| CTTTCAGCCTGAAAATGATA+GGG | + | chr3_4:19661107-19661126 | None:intergenic | 35.0% | |
| ACTTTCAGCCTGAAAATGAT+AGG | + | chr3_4:19661108-19661127 | None:intergenic | 35.0% | |
| ! | TATCAATGCTCCTTTTCTTC+AGG | - | chr3_4:19661361-19661380 | Msa0493740:intron | 35.0% |
| TCATAATTCGTTTCTCTGCT+CGG | + | chr3_4:19661457-19661476 | None:intergenic | 35.0% | |
| ATATGAAACTGAAGACGATG+AGG | - | chr3_4:19661674-19661693 | Msa0493740:intron | 35.0% | |
| ! | TGCACTGATAGAAAGTAAAC+TGG | + | chr3_4:19661891-19661910 | None:intergenic | 35.0% |
| TGCACCTTTACCATTTATTG+TGG | - | chr3_4:19661907-19661926 | Msa0493740:intron | 35.0% | |
| !!! | GGCTATTTTTTAATTTCCGG+CGG | - | chr3_4:19661962-19661981 | Msa0493740:intron | 35.0% |
| TGTCTACTTGTCAGTTGTTA+AGG | - | chr3_4:19662045-19662064 | Msa0493740:intron | 35.0% | |
| TTATGTGCCTTGATTCATGT+CGG | - | chr3_4:19662103-19662122 | Msa0493740:intron | 35.0% | |
| CTGCTTAGGATTCAAAAGAA+AGG | - | chr3_4:19662207-19662226 | Msa0493740:intron | 35.0% | |
| CAACCCAATAATGATTAGGT+TGG | + | chr3_4:19662247-19662266 | None:intergenic | 35.0% | |
| CAACCTAATCATTATTGGGT+TGG | - | chr3_4:19662245-19662264 | Msa0493740:intron | 35.0% | |
| ! | AAGAGAGTATGATGAGAAAC+CGG | - | chr3_4:19662300-19662319 | Msa0493740:intron | 35.0% |
| ! | ACCGTTGATGAGAAAAACAA+CGG | - | chr3_4:19662405-19662424 | Msa0493740:intron | 35.0% |
| !!! | ACCGTTGTTTTTCTCATCAA+CGG | + | chr3_4:19662409-19662428 | None:intergenic | 35.0% |
| GTAATGCTAACAAATCATGG+AGG | + | chr3_4:19662445-19662464 | None:intergenic | 35.0% | |
| TGGGTAATGCTAACAAATCA+TGG | + | chr3_4:19662448-19662467 | None:intergenic | 35.0% | |
| CACGGAAACAAAGTTTAACA+AGG | + | chr3_4:19662663-19662682 | None:intergenic | 35.0% | |
| ! | CTTGTTAAACTTTGTTTCCG+TGG | - | chr3_4:19662661-19662680 | Msa0493740:intron | 35.0% |
| !! | ACCAATAGACAAAAGTACCA+CGG | + | chr3_4:19662681-19662700 | None:intergenic | 35.0% |
| TGGTTTATCATCTCATGACA+AGG | + | chr3_4:19663069-19663088 | None:intergenic | 35.0% | |
| AAAAAAAAGGAGGAAGGAAG+GGG | + | chr3_4:19663145-19663164 | None:intergenic | 35.0% | |
| CATACAACAGACACATATGA+TGG | + | chr3_4:19663238-19663257 | None:intergenic | 35.0% | |
| CATCATATGTGTCTGTTGTA+TGG | - | chr3_4:19663236-19663255 | Msa0493740:intron | 35.0% | |
| ! | GAAATTTACTGAGCTTTTCC+AGG | - | chr3_4:19663296-19663315 | Msa0493740:intron | 35.0% |
| !!! | TGCTTTTTCCTCTATGATTC+AGG | - | chr3_4:19663345-19663364 | Msa0493740:intron | 35.0% |
| TGCAAAATCCTGAATCATAG+AGG | + | chr3_4:19663356-19663375 | None:intergenic | 35.0% | |
| TCAGAAGGAAAAATGCTCTT+TGG | - | chr3_4:19663384-19663403 | Msa0493740:intron | 35.0% | |
| AGACAAAATACCAACAAGCA+GGG | + | chr3_4:19663454-19663473 | None:intergenic | 35.0% | |
| CTGTTGATCACTGTATTTCT+TGG | - | chr3_4:19663481-19663500 | Msa0493740:CDS | 35.0% | |
| TTTCTACGCTCTCTCTGTTT+GGG | + | chr3_4:19655584-19655603 | None:intergenic | 40.0% | |
| ! | TTTTCTACGCTCTCTCTGTT+TGG | + | chr3_4:19655585-19655604 | None:intergenic | 40.0% |
| ! | ACAGAGAGAGCGTAGAAAAA+TGG | - | chr3_4:19655586-19655605 | Msa0493740:three_prime_UTR | 40.0% |
| ! | CAGAGAGAGCGTAGAAAAAT+GGG | - | chr3_4:19655587-19655606 | Msa0493740:three_prime_UTR | 40.0% |
| ! | AGAGAGAGCGTAGAAAAATG+GGG | - | chr3_4:19655588-19655607 | Msa0493740:three_prime_UTR | 40.0% |
| CAGATGATGCAGAATCTCTT+CGG | - | chr3_4:19655629-19655648 | Msa0493740:three_prime_UTR | 40.0% | |
| AAGTTCATCTTCTTCCTCCT+CGG | + | chr3_4:19655663-19655682 | None:intergenic | 40.0% | |
| ! | TGGATCTGATGATGATGAAC+AGG | - | chr3_4:19656122-19656141 | Msa0493740:CDS | 40.0% |
| CAATGAAATTGCTGGAGAAG+CGG | - | chr3_4:19656277-19656296 | Msa0493740:intron | 40.0% | |
| ATGTGGTTGCTAATTGAACC+GGG | - | chr3_4:19656306-19656325 | Msa0493740:intron | 40.0% | |
| AGTGTATCTGCAACGTAAAG+TGG | - | chr3_4:19656359-19656378 | Msa0493740:intron | 40.0% | |
| TGCAAAGACGATGATATGCA+TGG | - | chr3_4:19656479-19656498 | Msa0493740:intron | 40.0% | |
| GCAAAGACGATGATATGCAT+GGG | - | chr3_4:19656480-19656499 | Msa0493740:intron | 40.0% | |
| TTGGAGAAATAAGGAATCCC+GGG | + | chr3_4:19656518-19656537 | None:intergenic | 40.0% | |
| CTTGGAGAAATAAGGAATCC+CGG | + | chr3_4:19656519-19656538 | None:intergenic | 40.0% | |
| AGACTCACACATCTTAAGCT+TGG | + | chr3_4:19656537-19656556 | None:intergenic | 40.0% | |
| ATCAAGAAGGACTACACTAG+AGG | + | chr3_4:19656589-19656608 | None:intergenic | 40.0% | |
| ATAAAGCCAGTCCTTCTTGT+GGG | - | chr3_4:19656691-19656710 | Msa0493740:intron | 40.0% | |
| AAAACGTGCAAATTTCACCC+TGG | + | chr3_4:19656778-19656797 | None:intergenic | 40.0% | |
| ATAGGAGATTCTAGGTTGCA+AGG | + | chr3_4:19656889-19656908 | None:intergenic | 40.0% | |
| !! | TTTTCCTGATGGTGAGAAGA+TGG | - | chr3_4:19657000-19657019 | Msa0493740:intron | 40.0% |
| GGAGCATAGGGAATTGAAAA+CGG | - | chr3_4:19657021-19657040 | Msa0493740:intron | 40.0% | |
| AGGACAGGAAGAGGAATATT+GGG | - | chr3_4:19657071-19657090 | Msa0493740:intron | 40.0% | |
| AAGAGGAATATTGGGCACTT+GGG | - | chr3_4:19657079-19657098 | Msa0493740:intron | 40.0% | |
| GGTGTAGTTGGAAATGAAAC+TGG | + | chr3_4:19657273-19657292 | None:intergenic | 40.0% | |
| TCTCTTAACCTGAAGCTTGT+CGG | - | chr3_4:19657369-19657388 | Msa0493740:CDS | 40.0% | |
| TTTCAAATCCGACAAGCTTC+AGG | + | chr3_4:19657380-19657399 | None:intergenic | 40.0% | |
| AGCGTGAGACTGAAAATTTG+TGG | - | chr3_4:19657452-19657471 | Msa0493740:CDS | 40.0% | |
| AACTCGCAAAATGGTTCAAC+GGG | + | chr3_4:19657492-19657511 | None:intergenic | 40.0% | |
| CAACTCGCAAAATGGTTCAA+CGG | + | chr3_4:19657493-19657512 | None:intergenic | 40.0% | |
| CAGACTCACACTTGGAATAT+TGG | - | chr3_4:19657524-19657543 | Msa0493740:intron | 40.0% | |
| ! | CAAGAGCATAAGAATCAAGG+AGG | + | chr3_4:19657632-19657651 | None:intergenic | 40.0% |
| ! | GGACGAAAGTATGTCTCATA+AGG | + | chr3_4:19657830-19657849 | None:intergenic | 40.0% |
| ATACACAAGACTGACGACAA+AGG | + | chr3_4:19657858-19657877 | None:intergenic | 40.0% | |
| ! | TTGTCGTCAGTCTTGTGTAT+CGG | - | chr3_4:19657858-19657877 | Msa0493740:intron | 40.0% |
| GTGTGGTAGGAAATGAAACT+GGG | - | chr3_4:19657880-19657899 | Msa0493740:CDS | 40.0% | |
| ATTTCTTGACCTGAACATGC+TGG | + | chr3_4:19657906-19657925 | None:intergenic | 40.0% | |
| AAAACAGCAGTGAACTGGTT+TGG | - | chr3_4:19658026-19658045 | Msa0493740:intron | 40.0% | |
| ! | AAACAGCAGTGAACTGGTTT+GGG | - | chr3_4:19658027-19658046 | Msa0493740:intron | 40.0% |
| AAGAGGAATATTGGGCACTT+GGG | + | chr3_4:19657079-19657098 | None:intergenic | 40.0% | |
| GCTTCTTTCTCTCATTCTCT+GGG | + | chr3_4:19658179-19658198 | None:intergenic | 40.0% | |
| TGCTTCTTTCTCTCATTCTC+TGG | + | chr3_4:19658180-19658199 | None:intergenic | 40.0% | |
| !! | TTTGGTGATGTTTAGCTGCT+GGG | + | chr3_4:19658290-19658309 | None:intergenic | 40.0% |
| !!! | TTTTGGTGATGTTTAGCTGC+TGG | + | chr3_4:19658291-19658310 | None:intergenic | 40.0% |
| AAAACATGCAAATTTCGCCC+TGG | - | chr3_4:19658337-19658356 | Msa0493740:CDS | 40.0% | |
| TAAAGCGAGTTCTTGATGTG+GGG | + | chr3_4:19658423-19658442 | None:intergenic | 40.0% | |
| CATAAAGCGAGTTCTTGATG+TGG | + | chr3_4:19658425-19658444 | None:intergenic | 40.0% | |
| !!! | CTCATTTTTTTTGCCCCCTT+GGG | - | chr3_4:19658612-19658631 | Msa0493740:intron | 40.0% |
| GTCTGATCTTTGTCTTCTCT+GGG | + | chr3_4:19658978-19658997 | None:intergenic | 40.0% | |
| AGTCTGATCTTTGTCTTCTC+TGG | + | chr3_4:19658979-19658998 | None:intergenic | 40.0% | |
| CCGGAAATTCGTGATGTATT+TGG | - | chr3_4:19659017-19659036 | Msa0493740:intron | 40.0% | |
| ! | TGATGATGAAGAGGAGGATA+TGG | - | chr3_4:19659046-19659065 | Msa0493740:intron | 40.0% |
| GATGATGAAGAGGAGGATAT+GGG | - | chr3_4:19659047-19659066 | Msa0493740:intron | 40.0% | |
| ATGATGAAGAGGAGGATATG+GGG | - | chr3_4:19659048-19659067 | Msa0493740:intron | 40.0% | |
| TCATCAGCAAGTATATCCTC+GGG | + | chr3_4:19659250-19659269 | None:intergenic | 40.0% | |
| ! | AGAGCATCAGTATGAATCAG+AGG | - | chr3_4:19659270-19659289 | Msa0493740:CDS | 40.0% |
| CACAAATGAGAGGCGATTAT+AGG | + | chr3_4:19659733-19659752 | None:intergenic | 40.0% | |
| ATAATCGCCTCTCATTTGTG+TGG | - | chr3_4:19659733-19659752 | Msa0493740:CDS | 40.0% | |
| TGGATCAACTCCCATGATAT+TGG | + | chr3_4:19659781-19659800 | None:intergenic | 40.0% | |
| AGGAAAGTCACAAATCCTGA+TGG | - | chr3_4:19659903-19659922 | Msa0493740:intron | 40.0% | |
| CTTCCCATGGATGTAAAAGA+AGG | + | chr3_4:19660002-19660021 | None:intergenic | 40.0% | |
| ! | TCTTTTACATCCATGGGAAG+TGG | - | chr3_4:19660002-19660021 | Msa0493740:CDS | 40.0% |
| ! | CTAGTGGTCAAAGGCTTTAT+GGG | + | chr3_4:19660068-19660087 | None:intergenic | 40.0% |
| !! | TAATGGTTTGGTCTACCAGT+GGG | - | chr3_4:19660221-19660240 | Msa0493740:intron | 40.0% |
| AAAGCAATGCTCGCTTTGTA+AGG | - | chr3_4:19660655-19660674 | Msa0493740:intron | 40.0% | |
| AAGATGTGCTTGATCATGCT+GGG | + | chr3_4:19660745-19660764 | None:intergenic | 40.0% | |
| AAAGATGTGCTTGATCATGC+TGG | + | chr3_4:19660746-19660765 | None:intergenic | 40.0% | |
| ! | GCACATCTTTTCCTTAGACA+TGG | - | chr3_4:19660756-19660775 | Msa0493740:intron | 40.0% |
| GACTATGTGCACTTGTTTAC+AGG | - | chr3_4:19660837-19660856 | Msa0493740:intron | 40.0% | |
| !! | CAATTGTTGACTCAAGGCAA+AGG | - | chr3_4:19660947-19660966 | Msa0493740:intron | 40.0% |
| TTACAGACATTGATCCTGAG+AGG | - | chr3_4:19660995-19661014 | Msa0493740:intron | 40.0% | |
| TACAGACATTGATCCTGAGA+GGG | - | chr3_4:19660996-19661015 | Msa0493740:intron | 40.0% | |
| ! | CTTACGAGTAAGAAGTACGT+TGG | + | chr3_4:19661144-19661163 | None:intergenic | 40.0% |
| !! | ACTTTCTCCTGGGTTTTTAG+AGG | - | chr3_4:19661211-19661230 | Msa0493740:intron | 40.0% |
| ! | AAAGCATCCTCTAAAAACCC+AGG | + | chr3_4:19661221-19661240 | None:intergenic | 40.0% |
| !! | TGGGTTTTTAGAGGATGCTT+TGG | - | chr3_4:19661220-19661239 | Msa0493740:intron | 40.0% |
| ! | TTTAGAGGATGCTTTGGATG+AGG | - | chr3_4:19661226-19661245 | Msa0493740:intron | 40.0% |
| GGAACTGACACAGTTTAAGT+AGG | + | chr3_4:19661335-19661354 | None:intergenic | 40.0% | |
| ACTCTTCTCTCTCATCATCT+GGG | + | chr3_4:19661650-19661669 | None:intergenic | 40.0% | |
| AAGACGATGAGGAAGAAGAA+AGG | - | chr3_4:19661685-19661704 | Msa0493740:intron | 40.0% | |
| TATGAGGGATGATGATTCTG+AGG | - | chr3_4:19661719-19661738 | Msa0493740:intron | 40.0% | |
| !! | TGATTCTGAGGCAGAATATG+AGG | - | chr3_4:19661731-19661750 | Msa0493740:intron | 40.0% |
| AGAAAATGATGCTTCGGATG+AGG | - | chr3_4:19661782-19661801 | Msa0493740:intron | 40.0% | |
| CTACTTGTCAGTTGTTAAGG+TGG | - | chr3_4:19662048-19662067 | Msa0493740:intron | 40.0% | |
| GACATGAATCAAGGCACATA+AGG | + | chr3_4:19662104-19662123 | None:intergenic | 40.0% | |
| TATGTGCCTTGATTCATGTC+GGG | - | chr3_4:19662104-19662123 | Msa0493740:intron | 40.0% | |
| !! | GGTTGCATTGGTTTCAGTTA+GGG | - | chr3_4:19662151-19662170 | Msa0493740:intron | 40.0% |
| TATATCTCGTAGGATAGGAC+CGG | + | chr3_4:19662322-19662341 | None:intergenic | 40.0% | |
| CTAGCTATATCTCGTAGGAT+AGG | + | chr3_4:19662327-19662346 | None:intergenic | 40.0% | |
| CATCACTAGCTATATCTCGT+AGG | + | chr3_4:19662332-19662351 | None:intergenic | 40.0% | |
| CTACGAGATATAGCTAGTGA+TGG | - | chr3_4:19662330-19662349 | Msa0493740:intron | 40.0% | |
| ! | TCCGTGGTACTTTTGTCTAT+TGG | - | chr3_4:19662677-19662696 | Msa0493740:intron | 40.0% |
| ACAAGGATAGTGTTAGGAGT+AGG | + | chr3_4:19662706-19662725 | None:intergenic | 40.0% | |
| !!! | ATCTTTTAGGTTGCCACCTA+CGG | - | chr3_4:19662764-19662783 | Msa0493740:intron | 40.0% |
| CATACATTAGTGCATTCCGT+AGG | + | chr3_4:19662783-19662802 | None:intergenic | 40.0% | |
| AAAAGGTAAGGCCAAAAGGA+AGG | - | chr3_4:19662886-19662905 | Msa0493740:intron | 40.0% | |
| AAAGGTAAGGCCAAAAGGAA+GGG | - | chr3_4:19662887-19662906 | Msa0493740:intron | 40.0% | |
| ! | AGAATCAAACCCCTTCCTTT+TGG | + | chr3_4:19662900-19662919 | None:intergenic | 40.0% |
| AAGGGGTTTGATTCTGATGA+AGG | - | chr3_4:19662905-19662924 | Msa0493740:intron | 40.0% | |
| CATAATTGTCATTCGGCGAT+GGG | + | chr3_4:19662957-19662976 | None:intergenic | 40.0% | |
| ACATAATTGTCATTCGGCGA+TGG | + | chr3_4:19662958-19662977 | None:intergenic | 40.0% | |
| AAGGAAGGGGAAATAGCAAA+AGG | + | chr3_4:19663132-19663151 | None:intergenic | 40.0% | |
| AACAGACACATATGATGGCA+AGG | + | chr3_4:19663233-19663252 | None:intergenic | 40.0% | |
| TATTTGACCTCTTGAACCGT+AGG | - | chr3_4:19663261-19663280 | Msa0493740:intron | 40.0% | |
| TGAAAATCCTACGGTTCAAG+AGG | + | chr3_4:19663271-19663290 | None:intergenic | 40.0% | |
| GAGACAAAATACCAACAAGC+AGG | + | chr3_4:19663455-19663474 | None:intergenic | 40.0% | |
| !! | GCTTGTTGGTATTTTGTCTC+AGG | - | chr3_4:19663455-19663474 | Msa0493740:CDS | 40.0% |
| GGTGGGAAAAGTGAAGAGAA+GGG | + | chr3_4:19655563-19655582 | None:intergenic | 45.0% | |
| ! | GAGAGAGCGTAGAAAAATGG+GGG | - | chr3_4:19655589-19655608 | Msa0493740:three_prime_UTR | 45.0% |
| ! | AGAGAGCGTAGAAAAATGGG+GGG | - | chr3_4:19655590-19655609 | Msa0493740:three_prime_UTR | 45.0% |
| AAATGGGGGGTGAAGAGAAA+CGG | - | chr3_4:19655603-19655622 | Msa0493740:three_prime_UTR | 45.0% | |
| TTTCACGCAGAAGCTAGCTA+GGG | + | chr3_4:19655788-19655807 | None:intergenic | 45.0% | |
| ATTTCACGCAGAAGCTAGCT+AGG | + | chr3_4:19655789-19655808 | None:intergenic | 45.0% | |
| GTATTGCAGGATGAAGGAGA+GGG | - | chr3_4:19655892-19655911 | Msa0493740:intron | 45.0% | |
| GTAGGGCAAGAAGTTGAAGA+GGG | - | chr3_4:19655919-19655938 | Msa0493740:intron | 45.0% | |
| CAAGAAGTTGAAGAGGGTGA+AGG | - | chr3_4:19655925-19655944 | Msa0493740:intron | 45.0% | |
| GAAGAAGAAGCAGAGAGTGA+AGG | - | chr3_4:19655973-19655992 | Msa0493740:intron | 45.0% | |
| AGAGTGGAAGAAGAGAGTGA+AGG | - | chr3_4:19656018-19656037 | Msa0493740:intron | 45.0% | |
| TGGAAGAAGAGAGTGAAGGT+AGG | - | chr3_4:19656022-19656041 | Msa0493740:intron | 45.0% | |
| GGAAGAAGAGAGTGAAGGTA+GGG | - | chr3_4:19656023-19656042 | Msa0493740:intron | 45.0% | |
| GAAGAAGAGAGTGAAGGTAG+GGG | - | chr3_4:19656024-19656043 | Msa0493740:intron | 45.0% | |
| AAGAAGAGAGTGAAGGTAGG+GGG | - | chr3_4:19656025-19656044 | Msa0493740:intron | 45.0% | |
| TGTCGTTACCAGTAAGCGTA+GGG | - | chr3_4:19656086-19656105 | Msa0493740:intron | 45.0% | |
| CATAAAGCCAGTCCTTCTTG+TGG | - | chr3_4:19656690-19656709 | Msa0493740:intron | 45.0% | |
| TAAAGCCAGTCCTTCTTGTG+GGG | - | chr3_4:19656692-19656711 | Msa0493740:intron | 45.0% | |
| CGGCCAATCAACAGAATTGT+GGG | - | chr3_4:19656750-19656769 | Msa0493740:intron | 45.0% | |
| GTGCCCACAATTCTGTTGAT+TGG | + | chr3_4:19656756-19656775 | None:intergenic | 45.0% | |
| ! | TTTTGGTGAAGTTGAGCTGC+TGG | - | chr3_4:19656824-19656843 | Msa0493740:intron | 45.0% |
| TTTGGTGAAGTTGAGCTGCT+GGG | - | chr3_4:19656825-19656844 | Msa0493740:intron | 45.0% | |
| GGAAGCAGATAGGAGATTCT+AGG | + | chr3_4:19656897-19656916 | None:intergenic | 45.0% | |
| ATGGTGAGAAGATGGAGCAT+AGG | - | chr3_4:19657008-19657027 | Msa0493740:intron | 45.0% | |
| TGGTGAGAAGATGGAGCATA+GGG | - | chr3_4:19657009-19657028 | Msa0493740:intron | 45.0% | |
| GGAATTGAAAACGGCGACTA+GGG | - | chr3_4:19657030-19657049 | Msa0493740:intron | 45.0% | |
| GGTTAGAGAGTTCACTGAAG+AGG | - | chr3_4:19657051-19657070 | Msa0493740:intron | 45.0% | |
| GAGGACAGGAAGAGGAATAT+TGG | - | chr3_4:19657070-19657089 | Msa0493740:intron | 45.0% | |
| GAAGAGGAATATTGGGCACT+TGG | - | chr3_4:19657078-19657097 | Msa0493740:intron | 45.0% | |
| TGCCAATAATCTAGCCCAGA+CGG | + | chr3_4:19657208-19657227 | None:intergenic | 45.0% | |
| ATTTCTTGACCTGAACACGC+TGG | - | chr3_4:19657246-19657265 | Msa0493740:intron | 45.0% | |
| TTGTCGTCAATCTCGTGCAT+CGG | + | chr3_4:19657294-19657313 | None:intergenic | 45.0% | |
| ATGCACGAGATTGACGACAA+AGG | - | chr3_4:19657294-19657313 | Msa0493740:CDS | 45.0% | |
| AGATTGACGACAAAGGACAG+AGG | - | chr3_4:19657301-19657320 | Msa0493740:CDS | 45.0% | |
| ACGAGTTGCAACTCGCAAAA+TGG | + | chr3_4:19657501-19657520 | None:intergenic | 45.0% | |
| CTACACAAGGCACATTTGCA+TGG | + | chr3_4:19657705-19657724 | None:intergenic | 45.0% | |
| GGTGTGGTAGGAAATGAAAC+TGG | - | chr3_4:19657879-19657898 | Msa0493740:CDS | 45.0% | |
| GAAGAGGAATATTGGGCACT+TGG | + | chr3_4:19657078-19657097 | None:intergenic | 45.0% | |
| GCTCGCTGAAGAGGAATATT+GGG | + | chr3_4:19658061-19658080 | None:intergenic | 45.0% | |
| AGCTCGCTGAAGAGGAATAT+TGG | + | chr3_4:19658062-19658081 | None:intergenic | 45.0% | |
| TGGTGAGAAGATGCAGCATA+TGG | + | chr3_4:19658112-19658131 | None:intergenic | 45.0% | |
| ! | ACACAGAGACGAAAGCATAG+AGG | - | chr3_4:19658214-19658233 | Msa0493740:CDS | 45.0% |
| ! | GAAAGCATAGAGGAGCTTCA+AGG | - | chr3_4:19658224-19658243 | Msa0493740:CDS | 45.0% |
| AAAGCGAGTTCTTGATGTGG+GGG | + | chr3_4:19658422-19658441 | None:intergenic | 45.0% | |
| TTAATACTTGCGCCGTTGCT+GGG | + | chr3_4:19658464-19658483 | None:intergenic | 45.0% | |
| CCAAGGGGGCAAAAAAAATG+AGG | + | chr3_4:19658614-19658633 | None:intergenic | 45.0% | |
| !!! | CCTCATTTTTTTTGCCCCCT+TGG | - | chr3_4:19658611-19658630 | Msa0493740:intron | 45.0% |
| ! | TCATGATTTGGATTCTGCCC+CGG | - | chr3_4:19658998-19659017 | Msa0493740:intron | 45.0% |
| CCTGTTGTAGAGATATCCTG+CGG | - | chr3_4:19659192-19659211 | Msa0493740:CDS | 45.0% | |
| GCATCAGTATGAATCAGAGG+AGG | - | chr3_4:19659273-19659292 | Msa0493740:CDS | 45.0% | |
| AGTGGAATCTCCAACTCCAA+TGG | + | chr3_4:19659340-19659359 | None:intergenic | 45.0% | |
| GAACATAGGTCTCCAACACA+AGG | + | chr3_4:19659396-19659415 | None:intergenic | 45.0% | |
| TCATCTGCCACACAAATGAG+AGG | + | chr3_4:19659743-19659762 | None:intergenic | 45.0% | |
| ! | AAACAAGAAGCGCATACGCT+TGG | - | chr3_4:19659860-19659879 | Msa0493740:CDS | 45.0% |
| CTTACAGATGTTGTGCCATC+AGG | + | chr3_4:19659921-19659940 | None:intergenic | 45.0% | |
| CCTAGTGGTCAAAGGCTTTA+TGG | + | chr3_4:19660069-19660088 | None:intergenic | 45.0% | |
| CCATAAAGCCTTTGACCACT+AGG | - | chr3_4:19660066-19660085 | Msa0493740:CDS | 45.0% | |
| TAAAGCCTTTGACCACTAGG+TGG | - | chr3_4:19660069-19660088 | Msa0493740:CDS | 45.0% | |
| AAAGCCTTTGACCACTAGGT+GGG | - | chr3_4:19660070-19660089 | Msa0493740:CDS | 45.0% | |
| ATATATCCAACCCCACCTAG+TGG | + | chr3_4:19660084-19660103 | None:intergenic | 45.0% | |
| GATGCCACTATGCTTGATCA+TGG | - | chr3_4:19660113-19660132 | Msa0493740:CDS | 45.0% | |
| TGGTCCATGATCAAGCATAG+TGG | + | chr3_4:19660120-19660139 | None:intergenic | 45.0% | |
| !! | CTAATGGTTTGGTCTACCAG+TGG | - | chr3_4:19660220-19660239 | Msa0493740:intron | 45.0% |
| ! | TACCAGTGGGTCTTTTCTAC+AGG | - | chr3_4:19660234-19660253 | Msa0493740:intron | 45.0% |
| ! | TGGGTCTTTTCTACAGGTGT+TGG | - | chr3_4:19660240-19660259 | Msa0493740:intron | 45.0% |
| AAACCTTTCCCTGTTAGGCT+TGG | - | chr3_4:19660287-19660306 | Msa0493740:intron | 45.0% | |
| AGTTCTTGACGTATCTGAGC+AGG | - | chr3_4:19660716-19660735 | Msa0493740:intron | 45.0% | |
| CAAGTGCACATAGTCCATTG+AGG | + | chr3_4:19660832-19660851 | None:intergenic | 45.0% | |
| CAGGGAATTCTGCAATCACA+AGG | - | chr3_4:19660856-19660875 | Msa0493740:intron | 45.0% | |
| AATCACAAGGACAGCTATCG+AGG | - | chr3_4:19660869-19660888 | Msa0493740:intron | 45.0% | |
| GAATTCGACGACAAGGAAGA+GGG | + | chr3_4:19660910-19660929 | None:intergenic | 45.0% | |
| AGAATTCGACGACAAGGAAG+AGG | + | chr3_4:19660911-19660930 | None:intergenic | 45.0% | |
| CCTTGTCGTCGAATTCTCAT+CGG | - | chr3_4:19660914-19660933 | Msa0493740:intron | 45.0% | |
| !! | TGTTGACTCAAGGCAAAGGA+AGG | - | chr3_4:19660951-19660970 | Msa0493740:intron | 45.0% |
| AGGCTGAAAGTCAGACTATC+AGG | - | chr3_4:19661117-19661136 | Msa0493740:intron | 45.0% | |
| GGCTGAAAGTCAGACTATCA+GGG | - | chr3_4:19661118-19661137 | Msa0493740:intron | 45.0% | |
| TCTTACTCGTAAGCGCGAAA+AGG | - | chr3_4:19661151-19661170 | Msa0493740:intron | 45.0% | |
| GTAAGCGCGAAAAGGTGAAT+CGG | - | chr3_4:19661159-19661178 | Msa0493740:intron | 45.0% | |
| GGAAATATGCTCCAACTGAG+AGG | - | chr3_4:19661180-19661199 | Msa0493740:intron | 45.0% | |
| AATATGCTCCAACTGAGAGG+AGG | - | chr3_4:19661183-19661202 | Msa0493740:intron | 45.0% | |
| TAGAACACAGCGTCACTATG+AGG | - | chr3_4:19661412-19661431 | Msa0493740:intron | 45.0% | |
| GACTCTTCTCTCTCATCATC+TGG | + | chr3_4:19661651-19661670 | None:intergenic | 45.0% | |
| TGAGGCAGAATATGAGGATG+AGG | - | chr3_4:19661737-19661756 | Msa0493740:intron | 45.0% | |
| AATCACTAGTGTTTCACCGC+CGG | + | chr3_4:19661981-19662000 | None:intergenic | 45.0% | |
| ATGTGCCTTGATTCATGTCG+GGG | - | chr3_4:19662105-19662124 | Msa0493740:intron | 45.0% | |
| ACTGAAACCAATGCAACCCA+TGG | + | chr3_4:19662149-19662168 | None:intergenic | 45.0% | |
| !! | GGGTTGCATTGGTTTCAGTT+AGG | - | chr3_4:19662150-19662169 | Msa0493740:intron | 45.0% |
| TAGAGACCATGGCTGAAAGA+TGG | + | chr3_4:19662560-19662579 | None:intergenic | 45.0% | |
| ATCTTTCAGCCATGGTCTCT+AGG | - | chr3_4:19662559-19662578 | Msa0493740:intron | 45.0% | |
| ACATTAGTGCATTCCGTAGG+TGG | + | chr3_4:19662780-19662799 | None:intergenic | 45.0% | |
| AAGGTAAGGCCAAAAGGAAG+GGG | - | chr3_4:19662888-19662907 | Msa0493740:intron | 45.0% | |
| !! | GTTGTTGGTTTCTTAGGAGG+AGG | + | chr3_4:19662935-19662954 | None:intergenic | 45.0% |
| !! | TGGGTTGTTGGTTTCTTAGG+AGG | + | chr3_4:19662938-19662957 | None:intergenic | 45.0% |
| !! | CGATGGGTTGTTGGTTTCTT+AGG | + | chr3_4:19662941-19662960 | None:intergenic | 45.0% |
| TGATGGCAAGGACCATTTGA+TGG | + | chr3_4:19663221-19663240 | None:intergenic | 45.0% | |
| AGAGTGAATGACTACTACCC+TGG | + | chr3_4:19663317-19663336 | None:intergenic | 45.0% | |
| !!! | CAATTATAAATATATTTTTT+TGG | + | chr3_4:19655428-19655447 | None:intergenic | 5.0% |
| !! | AAATAATAATAATAAGTAAA+AGG | - | chr3_4:19657164-19657183 | Msa0493740:intron | 5.0% |
| !! | CAATAATAATAATAATTAAA+AGG | + | chr3_4:19657970-19657989 | None:intergenic | 5.0% |
| GGGTGGGAAAAGTGAAGAGA+AGG | + | chr3_4:19655564-19655583 | None:intergenic | 50.0% | |
| TACGCTCTCTCTGTTTGGGT+GGG | + | chr3_4:19655580-19655599 | None:intergenic | 50.0% | |
| TCTCTTCGGAGATCAATCCG+AGG | - | chr3_4:19655643-19655662 | Msa0493740:three_prime_UTR | 50.0% | |
| GGTATTGCAGGATGAAGGAG+AGG | - | chr3_4:19655891-19655910 | Msa0493740:intron | 50.0% | |
| GGTAGGGCAAGAAGTTGAAG+AGG | - | chr3_4:19655918-19655937 | Msa0493740:intron | 50.0% | |
| AGAGGGTGAAGGAGAAGTTG+AGG | - | chr3_4:19655936-19655955 | Msa0493740:intron | 50.0% | |
| GAGGGTGAAGGAGAAGTTGA+GGG | - | chr3_4:19655937-19655956 | Msa0493740:intron | 50.0% | |
| AGGGTGAAGGAGAAGTTGAG+GGG | - | chr3_4:19655938-19655957 | Msa0493740:intron | 50.0% | |
| AGAGAGTGAAGGTGAGAGAG+AGG | - | chr3_4:19655984-19656003 | Msa0493740:intron | 50.0% | |
| AGTGAAGGTGAGAGAGAGGT+TGG | - | chr3_4:19655988-19656007 | Msa0493740:intron | 50.0% | |
| !! | AGAGGTTGGTGATCAGAGAG+TGG | - | chr3_4:19656002-19656021 | Msa0493740:intron | 50.0% |
| AGAAGAGAGTGAAGGTAGGG+GGG | - | chr3_4:19656026-19656045 | Msa0493740:intron | 50.0% | |
| ! | GTGTCGTTACCAGTAAGCGT+AGG | - | chr3_4:19656085-19656104 | Msa0493740:intron | 50.0% |
| AACGACATCCCTACGCTTAC+TGG | + | chr3_4:19656097-19656116 | None:intergenic | 50.0% | |
| CGTAGGGATGTCGTTGAAAG+TGG | - | chr3_4:19656102-19656121 | Msa0493740:intron | 50.0% | |
| ACAGCACCAACCCAACAATG+TGG | + | chr3_4:19656225-19656244 | None:intergenic | 50.0% | |
| GATGTGTGAGTCTAGCCACT+AGG | - | chr3_4:19656544-19656563 | Msa0493740:intron | 50.0% | |
| AAAGCCAGTCCTTCTTGTGG+GGG | - | chr3_4:19656693-19656712 | Msa0493740:intron | 50.0% | |
| CTCATAAACCCCCCACAAGA+AGG | + | chr3_4:19656705-19656724 | None:intergenic | 50.0% | |
| GCGGCCAATCAACAGAATTG+TGG | - | chr3_4:19656749-19656768 | Msa0493740:intron | 50.0% | |
| TCAACAGAATTGTGGGCACC+AGG | - | chr3_4:19656757-19656776 | Msa0493740:intron | 50.0% | |
| CAACAGAATTGTGGGCACCA+GGG | - | chr3_4:19656758-19656777 | Msa0493740:intron | 50.0% | |
| ACACAGAGACGGAAGCAGAT+AGG | + | chr3_4:19656907-19656926 | None:intergenic | 50.0% | |
| ACTCGCACACAACACAGAGA+CGG | + | chr3_4:19656918-19656937 | None:intergenic | 50.0% | |
| TGCTCCATCTTCTCACCATC+AGG | + | chr3_4:19657007-19657026 | None:intergenic | 50.0% | |
| GGGAATTGAAAACGGCGACT+AGG | - | chr3_4:19657029-19657048 | Msa0493740:intron | 50.0% | |
| GAGAGTTCACTGAAGAGGAC+AGG | - | chr3_4:19657056-19657075 | Msa0493740:intron | 50.0% | |
| TCACTGAAGAGGACAGGAAG+AGG | - | chr3_4:19657062-19657081 | Msa0493740:intron | 50.0% | |
| AAGAAAGGAATTGGGCCGTC+TGG | - | chr3_4:19657190-19657209 | Msa0493740:intron | 50.0% | |
| AGAAAGGAATTGGGCCGTCT+GGG | - | chr3_4:19657191-19657210 | Msa0493740:intron | 50.0% | |
| ! | ATCTCGTGCATCGGTGTAGT+TGG | + | chr3_4:19657285-19657304 | None:intergenic | 50.0% |
| !! | TGGTTCAACGGGCATTGAAG+TGG | + | chr3_4:19657481-19657500 | None:intergenic | 50.0% |
| CTCGTAGTCAGACTCACACT+TGG | - | chr3_4:19657516-19657535 | Msa0493740:CDS | 50.0% | |
| ATCAAGGAGGACTACACCAG+AGG | + | chr3_4:19657619-19657638 | None:intergenic | 50.0% | |
| AGACTGACGACAAAGGACAG+AGG | + | chr3_4:19657851-19657870 | None:intergenic | 50.0% | |
| ! | GTCAGTCTTGTGTATCGGTG+TGG | - | chr3_4:19657863-19657882 | Msa0493740:CDS | 50.0% |
| ! | GTCTTGTGTATCGGTGTGGT+AGG | - | chr3_4:19657867-19657886 | Msa0493740:CDS | 50.0% |
| AGAAAGGAATTGGGCCGTCT+GGG | + | chr3_4:19657191-19657210 | None:intergenic | 50.0% | |
| AAGAAAGGAATTGGGCCGTC+TGG | + | chr3_4:19657190-19657209 | None:intergenic | 50.0% | |
| TGCTGCATCTTCTCACCATC+AGG | - | chr3_4:19658114-19658133 | Msa0493740:CDS | 50.0% | |
| CGGCCAATCAGCAGAATTGT+GGG | + | chr3_4:19658365-19658384 | None:intergenic | 50.0% | |
| AAGCGAGTTCTTGATGTGGG+GGG | + | chr3_4:19658421-19658440 | None:intergenic | 50.0% | |
| GTTAATACTTGCGCCGTTGC+TGG | + | chr3_4:19658465-19658484 | None:intergenic | 50.0% | |
| CCGCAGGATATCTCTACAAC+AGG | + | chr3_4:19659195-19659214 | None:intergenic | 50.0% | |
| GTTGTAGAGATATCCTGCGG+AGG | - | chr3_4:19659195-19659214 | Msa0493740:CDS | 50.0% | |
| TGAAAAGAGCTTGAGACCCG+AGG | - | chr3_4:19659231-19659250 | Msa0493740:CDS | 50.0% | |
| GGAATCTCCAACTCCAATGG+TGG | + | chr3_4:19659337-19659356 | None:intergenic | 50.0% | |
| AACACAAGGCAGACCTTTCC+TGG | + | chr3_4:19659382-19659401 | None:intergenic | 50.0% | |
| AGGAAAGGTCTGCCTTGTGT+TGG | - | chr3_4:19659381-19659400 | Msa0493740:intron | 50.0% | |
| ! | GTAAAGGTTGCCACTTCCCA+TGG | + | chr3_4:19660015-19660034 | None:intergenic | 50.0% |
| AAGCCTTTGACCACTAGGTG+GGG | - | chr3_4:19660071-19660090 | Msa0493740:CDS | 50.0% | |
| CACCTGTAGAAAAGACCCAC+TGG | + | chr3_4:19660239-19660258 | None:intergenic | 50.0% | |
| TGACCAAGCCTAACAGGGAA+AGG | + | chr3_4:19660293-19660312 | None:intergenic | 50.0% | |
| GCAATGCTCGCTTTGTAAGG+TGG | - | chr3_4:19660658-19660677 | Msa0493740:intron | 50.0% | |
| CGCTTTGTAAGGTGGTCTGA+TGG | - | chr3_4:19660666-19660685 | Msa0493740:intron | 50.0% | |
| CCGATGAGAATTCGACGACA+AGG | + | chr3_4:19660917-19660936 | None:intergenic | 50.0% | |
| ! | TGCTCCTTTTCTTCAGGACG+AGG | - | chr3_4:19661367-19661386 | Msa0493740:intron | 50.0% |
| GCTTCCTCGTCCTGAAGAAA+AGG | + | chr3_4:19661374-19661393 | None:intergenic | 50.0% | |
| AACACAGCGTCACTATGAGG+AGG | - | chr3_4:19661415-19661434 | Msa0493740:intron | 50.0% | |
| CATCATCTGGGTAACCCACT+TGG | + | chr3_4:19661638-19661657 | None:intergenic | 50.0% | |
| TTCGGATGAGGACGAAGATG+AGG | - | chr3_4:19661794-19661813 | Msa0493740:intron | 50.0% | |
| GAAGTCCCCGACATGAATCA+AGG | + | chr3_4:19662113-19662132 | None:intergenic | 50.0% | |
| ATGTCGGGGACTTCAGAAGT+AGG | - | chr3_4:19662119-19662138 | Msa0493740:intron | 50.0% | |
| TGTCGGGGACTTCAGAAGTA+GGG | - | chr3_4:19662120-19662139 | Msa0493740:intron | 50.0% | |
| TTCAGAAGTAGGGGGACCAT+GGG | - | chr3_4:19662130-19662149 | Msa0493740:intron | 50.0% | |
| GAGTGACCATCTTTCAGCCA+TGG | - | chr3_4:19662551-19662570 | Msa0493740:intron | 50.0% | |
| AAGCAGGGAATACAGAGGAG+GGG | + | chr3_4:19663439-19663458 | None:intergenic | 50.0% | |
| CAAGCAGGGAATACAGAGGA+GGG | + | chr3_4:19663440-19663459 | None:intergenic | 50.0% | |
| ACAAGCAGGGAATACAGAGG+AGG | + | chr3_4:19663441-19663460 | None:intergenic | 50.0% | |
| CCAACAAGCAGGGAATACAG+AGG | + | chr3_4:19663444-19663463 | None:intergenic | 50.0% | |
| CCTCTGTATTCCCTGCTTGT+TGG | - | chr3_4:19663441-19663460 | Msa0493740:CDS | 50.0% | |
| CTACGCTCTCTCTGTTTGGG+TGG | + | chr3_4:19655581-19655600 | None:intergenic | 55.0% | |
| CTTCGGAGATCAATCCGAGG+AGG | - | chr3_4:19655646-19655665 | Msa0493740:three_prime_UTR | 55.0% | |
| TTGCAGGATGAAGGAGAGGG+AGG | - | chr3_4:19655895-19655914 | Msa0493740:intron | 55.0% | |
| TGCAGGATGAAGGAGAGGGA+GGG | - | chr3_4:19655896-19655915 | Msa0493740:intron | 55.0% | |
| ATGAAGGAGAGGGAGGGGTA+GGG | - | chr3_4:19655902-19655921 | Msa0493740:intron | 55.0% | |
| TGAAGGAGAAGTTGAGGGGC+AGG | - | chr3_4:19655942-19655961 | Msa0493740:intron | 55.0% | |
| GAAGGAGAAGTTGAGGGGCA+GGG | - | chr3_4:19655943-19655962 | Msa0493740:intron | 55.0% | |
| CAGCAGCTAGAAGAAGCCTG+AGG | - | chr3_4:19656154-19656173 | Msa0493740:CDS | 55.0% | |
| TGGAGAAGCGGCACACTATG+TGG | - | chr3_4:19656289-19656308 | Msa0493740:intron | 55.0% | |
| AAGCCAGTCCTTCTTGTGGG+GGG | - | chr3_4:19656694-19656713 | Msa0493740:intron | 55.0% | |
| AAACCCCCCACAAGAAGGAC+TGG | + | chr3_4:19656700-19656719 | None:intergenic | 55.0% | |
| ! | TGTTGATTGGCCGCGATCCT+CGG | + | chr3_4:19656743-19656762 | None:intergenic | 55.0% |
| CGCAAAGAGTAGCAGTGTCC+AGG | + | chr3_4:19656851-19656870 | None:intergenic | 55.0% | |
| ! | GGCCGTCTGGGCTAGATTAT+TGG | - | chr3_4:19657203-19657222 | Msa0493740:intron | 55.0% |
| GAAACTGGGCCAGCATGTTC+AGG | - | chr3_4:19657894-19657913 | Msa0493740:CDS | 55.0% | |
| GGTTAGAGAGCTCGCTGAAG+AGG | + | chr3_4:19658070-19658089 | None:intergenic | 55.0% | |
| TGCAGAGAGTAGCAGTGTCC+AGG | - | chr3_4:19658264-19658283 | Msa0493740:intron | 55.0% | |
| TGATGTTTAGCTGCTGGGCC+TGG | + | chr3_4:19658285-19658304 | None:intergenic | 55.0% | |
| GCGCCCACAATTCTGCTGAT+TGG | - | chr3_4:19658359-19658378 | Msa0493740:CDS | 55.0% | |
| GCGGCCAATCAGCAGAATTG+TGG | + | chr3_4:19658366-19658385 | None:intergenic | 55.0% | |
| ! | TGCTGATTGGCCGCGATTCT+CGG | - | chr3_4:19658372-19658391 | Msa0493740:CDS | 55.0% |
| ACTCTGACAGCCGAGAATCG+CGG | + | chr3_4:19658385-19658404 | None:intergenic | 55.0% | |
| CGATTCTCGGCTGTCAGAGT+CGG | - | chr3_4:19658385-19658404 | Msa0493740:CDS | 55.0% | |
| AGTGCCAATCCACCCAGCAA+CGG | - | chr3_4:19658449-19658468 | Msa0493740:intron | 55.0% | |
| TATGGGGTATGCAGCTCAGC+AGG | - | chr3_4:19659064-19659083 | Msa0493740:intron | 55.0% | |
| GTAGAGATATCCTGCGGAGG+AGG | - | chr3_4:19659198-19659217 | Msa0493740:CDS | 55.0% | |
| AGATATCCTGCGGAGGAGGA+AGG | - | chr3_4:19659202-19659221 | Msa0493740:CDS | 55.0% | |
| GATATCCTGCGGAGGAGGAA+GGG | - | chr3_4:19659203-19659222 | Msa0493740:CDS | 55.0% | |
| TAAGCCACTTGGGCCACCAT+TGG | - | chr3_4:19659321-19659340 | Msa0493740:CDS | 55.0% | |
| AACTCCAATGGTGGCCCAAG+TGG | + | chr3_4:19659328-19659347 | None:intergenic | 55.0% | |
| ACTTGGGCCACCATTGGAGT+TGG | - | chr3_4:19659327-19659346 | Msa0493740:CDS | 55.0% | |
| TTTCCTGGAAGAGCTGGAGG+TGG | + | chr3_4:19659367-19659386 | None:intergenic | 55.0% | |
| ACCTCCAGCTCTTCCAGGAA+AGG | - | chr3_4:19659366-19659385 | Msa0493740:intron | 55.0% | |
| ACCTTTCCTGGAAGAGCTGG+AGG | + | chr3_4:19659370-19659389 | None:intergenic | 55.0% | |
| CAGACCTTTCCTGGAAGAGC+TGG | + | chr3_4:19659373-19659392 | None:intergenic | 55.0% | |
| CAACCCCACCTAGTGGTCAA+AGG | + | chr3_4:19660077-19660096 | None:intergenic | 55.0% | |
| CTTTGACCACTAGGTGGGGT+TGG | - | chr3_4:19660075-19660094 | Msa0493740:CDS | 55.0% | |
| AGTTGACGCCTCCTCTCAGT+TGG | + | chr3_4:19661194-19661213 | None:intergenic | 55.0% | |
| !! | AGGAGGCGTCAACTTTCTCC+TGG | - | chr3_4:19661200-19661219 | Msa0493740:intron | 55.0% |
| !! | GGAGGCGTCAACTTTCTCCT+GGG | - | chr3_4:19661201-19661220 | Msa0493740:intron | 55.0% |
| !! | GACCAAAGAGCATCCCTCGT+AGG | - | chr3_4:19661577-19661596 | Msa0493740:intron | 55.0% |
| GACCTACGAGGGATGCTCTT+TGG | + | chr3_4:19661582-19661601 | None:intergenic | 55.0% | |
| GGAGGAACGATGACCTACGA+GGG | + | chr3_4:19661593-19661612 | None:intergenic | 55.0% | |
| TCCCACCAGCAAAATCCTCC+CGG | - | chr3_4:19661610-19661629 | Msa0493740:intron | 55.0% | |
| AAAATCCTCCCGGCACCAAG+TGG | - | chr3_4:19661620-19661639 | Msa0493740:intron | 55.0% | |
| AAATCCTCCCGGCACCAAGT+GGG | - | chr3_4:19661621-19661640 | Msa0493740:intron | 55.0% | |
| AAAGGCCTCGCTCTCGTATG+AGG | - | chr3_4:19661703-19661722 | Msa0493740:intron | 55.0% | |
| AAGGCCTCGCTCTCGTATGA+GGG | - | chr3_4:19661704-19661723 | Msa0493740:intron | 55.0% | |
| TCATCCCTCATACGAGAGCG+AGG | + | chr3_4:19661711-19661730 | None:intergenic | 55.0% | |
| GTCGGGGACTTCAGAAGTAG+GGG | - | chr3_4:19662121-19662140 | Msa0493740:intron | 55.0% | |
| TCGGGGACTTCAGAAGTAGG+GGG | - | chr3_4:19662122-19662141 | Msa0493740:intron | 55.0% | |
| CTTCAGAAGTAGGGGGACCA+TGG | - | chr3_4:19662129-19662148 | Msa0493740:intron | 55.0% | |
| CGAACTCTGCCTAGAGACCA+TGG | + | chr3_4:19662571-19662590 | None:intergenic | 55.0% | |
| !! | GTCATTCGGCGATGGGTTGT+TGG | + | chr3_4:19662950-19662969 | None:intergenic | 55.0% |
| AGCAGGGAATACAGAGGAGG+GGG | + | chr3_4:19663438-19663457 | None:intergenic | 55.0% | |
| GCAGGATGAAGGAGAGGGAG+GGG | - | chr3_4:19655897-19655916 | Msa0493740:intron | 60.0% | |
| GATGAAGGAGAGGGAGGGGT+AGG | - | chr3_4:19655901-19655920 | Msa0493740:intron | 60.0% | |
| AGAAGTTGAGGGGCAGGGAG+AGG | - | chr3_4:19655948-19655967 | Msa0493740:intron | 60.0% | |
| CATGGGCCTGAGTTCGAACC+CGG | - | chr3_4:19656497-19656516 | Msa0493740:intron | 60.0% | |
| ATGGGCCTGAGTTCGAACCC+GGG | - | chr3_4:19656498-19656517 | Msa0493740:intron | 60.0% | |
| GGAATCCCGGGTTCGAACTC+AGG | + | chr3_4:19656506-19656525 | None:intergenic | 60.0% | |
| ! | AGAACCGACTCTGACAGCCG+AGG | - | chr3_4:19656723-19656742 | Msa0493740:intron | 60.0% |
| CGATCCTCGGCTGTCAGAGT+CGG | + | chr3_4:19656730-19656749 | None:intergenic | 60.0% | |
| ACTCTGACAGCCGAGGATCG+CGG | - | chr3_4:19656730-19656749 | Msa0493740:intron | 60.0% | |
| TGAAGTTGAGCTGCTGGGCC+TGG | - | chr3_4:19656830-19656849 | Msa0493740:intron | 60.0% | |
| GAAACTGGGCCAGCGTGTTC+AGG | + | chr3_4:19657258-19657277 | None:intergenic | 60.0% | |
| CAGCAGAATTGTGGGCGCCA+GGG | + | chr3_4:19658357-19658376 | None:intergenic | 60.0% | |
| TCAGCAGAATTGTGGGCGCC+AGG | + | chr3_4:19658358-19658377 | None:intergenic | 60.0% | |
| ATACTTGCGCCGTTGCTGGG+TGG | + | chr3_4:19658461-19658480 | None:intergenic | 60.0% | |
| AGAGCTGGAGGTGGACGTAG+TGG | + | chr3_4:19659358-19659377 | None:intergenic | 60.0% | |
| GGGAGGAACGATGACCTACG+AGG | + | chr3_4:19661594-19661613 | None:intergenic | 60.0% | |
| ! | GGGAGGATTTTGCTGGTGGG+AGG | + | chr3_4:19661611-19661630 | None:intergenic | 60.0% |
| ! | GCCGGGAGGATTTTGCTGGT+GGG | + | chr3_4:19661614-19661633 | None:intergenic | 60.0% |
| ! | TGCCGGGAGGATTTTGCTGG+TGG | + | chr3_4:19661615-19661634 | None:intergenic | 60.0% |
| !! | TGGTGCCGGGAGGATTTTGC+TGG | + | chr3_4:19661618-19661637 | None:intergenic | 60.0% |
| !! | TGGGTAACCCACTTGGTGCC+GGG | + | chr3_4:19661631-19661650 | None:intergenic | 60.0% |
| !! | CTGGGTAACCCACTTGGTGC+CGG | + | chr3_4:19661632-19661651 | None:intergenic | 60.0% |
| ! | AGGGGGACCATGGGTTGCAT+TGG | - | chr3_4:19662139-19662158 | Msa0493740:intron | 60.0% |
| TGCGCCGTTGCTGGGTGGAT+TGG | + | chr3_4:19658456-19658475 | None:intergenic | 65.0% | |
| TAGCTCCCTTCCTCCTCCGC+AGG | + | chr3_4:19659211-19659230 | None:intergenic | 65.0% | |
| CGTCCACCTCCAGCTCTTCC+AGG | - | chr3_4:19659361-19659380 | Msa0493740:intron | 65.0% | |
| !! | GTAACCCACTTGGTGCCGGG+AGG | + | chr3_4:19661628-19661647 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 19655411 | 19663697 | 19655411 | ID=Msa0493740;Name=Msa0493740 |
| chr3_4 | mRNA | 19655411 | 19663697 | 19655411 | ID=Msa0493740-mRNA-1;Parent=Msa0493740;Name=Msa0493740-mRNA-1;_AED=0.07;_eAED=0.07;_QI=194|1|1|1|0.81|0.83|12|337|606 |
| chr3_4 | exon | 19655411 | 19655741 | 19655411 | ID=Msa0493740-mRNA-1:exon:5287;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19656105 | 19656248 | 19656105 | ID=Msa0493740-mRNA-1:exon:5286;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19657293 | 19657538 | 19657293 | ID=Msa0493740-mRNA-1:exon:5285;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19657621 | 19657725 | 19657621 | ID=Msa0493740-mRNA-1:exon:5284;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19657861 | 19657989 | 19657861 | ID=Msa0493740-mRNA-1:exon:5283;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19658070 | 19658249 | 19658070 | ID=Msa0493740-mRNA-1:exon:5282;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19658326 | 19658457 | 19658326 | ID=Msa0493740-mRNA-1:exon:5281;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19659173 | 19659349 | 19659173 | ID=Msa0493740-mRNA-1:exon:5280;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19659721 | 19659906 | 19659721 | ID=Msa0493740-mRNA-1:exon:5279;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19660002 | 19660140 | 19660002 | ID=Msa0493740-mRNA-1:exon:5278;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19662933 | 19663207 | 19662933 | ID=Msa0493740-mRNA-1:exon:5277;Parent=Msa0493740-mRNA-1 |
| chr3_4 | exon | 19663390 | 19663697 | 19663390 | ID=Msa0493740-mRNA-1:exon:5276;Parent=Msa0493740-mRNA-1 |
| chr3_4 | five_prime_UTR | 19663504 | 19663697 | 19663504 | ID=Msa0493740-mRNA-1:five_prime_utr;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19663390 | 19663503 | 19663390 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19662933 | 19663207 | 19662933 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19660002 | 19660140 | 19660002 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19659721 | 19659906 | 19659721 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19659173 | 19659349 | 19659173 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19658326 | 19658457 | 19658326 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19658070 | 19658249 | 19658070 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19657861 | 19657989 | 19657861 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19657621 | 19657725 | 19657621 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19657293 | 19657538 | 19657293 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | CDS | 19656111 | 19656248 | 19656111 | ID=Msa0493740-mRNA-1:cds;Parent=Msa0493740-mRNA-1 |
| chr3_4 | three_prime_UTR | 19656105 | 19656110 | 19656105 | ID=Msa0493740-mRNA-1:three_prime_utr;Parent=Msa0493740-mRNA-1 |
| chr3_4 | three_prime_UTR | 19655411 | 19655741 | 19655411 | ID=Msa0493740-mRNA-1:three_prime_utr;Parent=Msa0493740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
