Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367850 | XP_003600650.2 | 99.528 | 212 | 1 | 0 | 1 | 212 | 1 | 212 | 3.14e-153 | 433 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367850 | sp|Q96324|GSTFB_ARATH | 58.962 | 212 | 87 | 0 | 1 | 212 | 1 | 212 | 8.49e-93 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367850 | A0A2Z2Z7E2 | 99.528 | 212 | 1 | 0 | 1 | 212 | 1 | 212 | 1.50e-153 | 433 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010560 | Msa0367850 | 0.830677 | 2.567242e-55 | -8.615850e-47 |
| Msa0050990 | Msa0367850 | 0.833968 | 3.930311e-56 | -8.615850e-47 |
| Msa0101300 | Msa0367850 | 0.827556 | 1.466057e-54 | -8.615850e-47 |
| Msa0193890 | Msa0367850 | 0.803710 | 3.060894e-49 | -8.615850e-47 |
| Msa0367850 | Msa0368080 | 0.823438 | 1.385262e-53 | -8.615850e-47 |
| Msa0367850 | Msa0415620 | 0.970770 | 3.992443e-132 | -8.615850e-47 |
| Msa0367850 | Msa0460620 | 0.936277 | 2.244529e-97 | -8.615850e-47 |
| Msa0367850 | Msa0460980 | 0.821801 | 3.329089e-53 | -8.615850e-47 |
| Msa0367850 | Msa0506980 | 0.831589 | 1.531877e-55 | -8.615850e-47 |
| Msa0367850 | Msa0754030 | 0.807446 | 5.035447e-50 | -8.615850e-47 |
| Msa0367850 | Msa0807110 | 0.823696 | 1.205521e-53 | -8.615850e-47 |
| Msa0367850 | Msa0833040 | 0.824464 | 7.960318e-54 | -8.615850e-47 |
| Msa0367850 | Msa1408870 | 0.824026 | 1.008839e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367850 | MtrunA17_Chr3g0109891 | 99.528 | 212 | 1 | 0 | 1 | 212 | 1 | 212 | 2.89e-157 | 433 |
| Msa0367850 | MtrunA17_Chr3g0095781 | 58.294 | 211 | 87 | 1 | 1 | 211 | 1 | 210 | 1.73e-87 | 257 |
| Msa0367850 | MtrunA17_Chr5g0442751 | 55.399 | 213 | 89 | 4 | 1 | 210 | 1 | 210 | 5.62e-80 | 238 |
| Msa0367850 | MtrunA17_Chr5g0442741 | 52.113 | 213 | 98 | 3 | 1 | 211 | 1 | 211 | 1.69e-75 | 226 |
| Msa0367850 | MtrunA17_Chr3g0095821 | 55.488 | 164 | 73 | 0 | 48 | 211 | 1 | 164 | 8.88e-68 | 205 |
| Msa0367850 | MtrunA17_Chr1g0157211 | 45.794 | 214 | 111 | 2 | 3 | 211 | 5 | 218 | 9.32e-62 | 192 |
| Msa0367850 | MtrunA17_Chr1g0195811 | 43.961 | 207 | 115 | 1 | 2 | 208 | 3 | 208 | 2.02e-59 | 186 |
| Msa0367850 | MtrunA17_Chr1g0195821 | 44.928 | 207 | 113 | 1 | 2 | 208 | 3 | 208 | 3.07e-58 | 182 |
| Msa0367850 | MtrunA17_Chr1g0195831 | 42.584 | 209 | 118 | 2 | 1 | 208 | 1 | 208 | 6.05e-56 | 177 |
| Msa0367850 | MtrunA17_Chr8g0386711 | 28.070 | 171 | 120 | 1 | 1 | 168 | 1 | 171 | 3.24e-14 | 69.3 |
| Msa0367850 | MtrunA17_Chr2g0276951 | 30.233 | 172 | 107 | 6 | 40 | 208 | 42 | 203 | 1.44e-13 | 68.6 |
| Msa0367850 | MtrunA17_Chr3g0095811 | 61.224 | 49 | 18 | 1 | 1 | 49 | 1 | 48 | 4.49e-13 | 62.0 |
| Msa0367850 | MtrunA17_Chr1g0198101 | 46.032 | 63 | 33 | 1 | 146 | 208 | 1 | 62 | 1.91e-12 | 60.5 |
| Msa0367850 | MtrunA17_Chr0c12g0493651 | 28.324 | 173 | 110 | 4 | 40 | 208 | 40 | 202 | 2.55e-12 | 65.1 |
| Msa0367850 | MtrunA17_Chr3g0102331 | 27.059 | 170 | 115 | 5 | 40 | 208 | 40 | 201 | 4.46e-12 | 64.3 |
| Msa0367850 | MtrunA17_Chr4g0076691 | 28.358 | 201 | 125 | 5 | 5 | 202 | 18 | 202 | 9.73e-12 | 62.0 |
| Msa0367850 | MtrunA17_Chr4g0076681 | 34.906 | 106 | 68 | 1 | 5 | 110 | 18 | 122 | 1.69e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367850 | AT3G03190.1 | 58.962 | 212 | 87 | 0 | 1 | 212 | 1 | 212 | 8.63e-94 | 273 |
| Msa0367850 | AT5G17220.1 | 54.717 | 212 | 96 | 0 | 1 | 212 | 1 | 212 | 4.07e-88 | 259 |
| Msa0367850 | AT2G30870.1 | 52.404 | 208 | 98 | 1 | 1 | 208 | 1 | 207 | 2.87e-76 | 229 |
| Msa0367850 | AT2G30860.1 | 51.208 | 207 | 100 | 1 | 1 | 207 | 1 | 206 | 9.06e-73 | 220 |
| Msa0367850 | AT3G62760.1 | 43.810 | 210 | 116 | 2 | 1 | 209 | 1 | 209 | 2.19e-57 | 181 |
| Msa0367850 | AT1G02930.2 | 43.204 | 206 | 115 | 2 | 3 | 208 | 4 | 207 | 4.02e-55 | 175 |
| Msa0367850 | AT1G02930.1 | 43.204 | 206 | 115 | 2 | 3 | 208 | 4 | 207 | 4.02e-55 | 175 |
| Msa0367850 | AT1G02920.1 | 43.689 | 206 | 115 | 1 | 3 | 208 | 4 | 208 | 1.31e-54 | 173 |
| Msa0367850 | AT2G47730.2 | 42.788 | 208 | 117 | 2 | 5 | 211 | 54 | 260 | 3.99e-52 | 169 |
| Msa0367850 | AT2G47730.1 | 42.788 | 208 | 117 | 2 | 5 | 211 | 54 | 260 | 3.99e-52 | 169 |
| Msa0367850 | AT4G02520.1 | 41.429 | 210 | 119 | 2 | 3 | 209 | 4 | 212 | 4.91e-52 | 167 |
| Msa0367850 | AT2G02930.1 | 41.627 | 209 | 118 | 2 | 3 | 208 | 4 | 211 | 9.52e-51 | 164 |
| Msa0367850 | AT1G49860.1 | 44.503 | 191 | 103 | 2 | 20 | 207 | 22 | 212 | 6.02e-50 | 163 |
| Msa0367850 | AT1G02950.3 | 42.647 | 204 | 115 | 2 | 4 | 206 | 26 | 228 | 1.78e-49 | 161 |
| Msa0367850 | AT1G02950.1 | 42.647 | 204 | 115 | 2 | 4 | 206 | 26 | 228 | 1.78e-49 | 161 |
| Msa0367850 | AT1G02950.2 | 42.647 | 204 | 115 | 2 | 4 | 206 | 28 | 230 | 1.81e-49 | 161 |
| Msa0367850 | AT1G02950.5 | 42.647 | 204 | 115 | 2 | 4 | 206 | 38 | 240 | 2.50e-49 | 161 |
| Msa0367850 | AT2G30860.2 | 50.323 | 155 | 76 | 1 | 1 | 155 | 1 | 154 | 2.66e-49 | 158 |
| Msa0367850 | AT1G02940.4 | 39.024 | 205 | 123 | 2 | 4 | 207 | 40 | 243 | 1.56e-47 | 157 |
| Msa0367850 | AT1G02940.1 | 39.024 | 205 | 123 | 2 | 4 | 207 | 40 | 243 | 1.56e-47 | 157 |
| Msa0367850 | AT1G02940.3 | 39.024 | 205 | 123 | 2 | 4 | 207 | 53 | 256 | 1.77e-47 | 157 |
| Msa0367850 | AT1G02940.2 | 39.024 | 205 | 123 | 2 | 4 | 207 | 65 | 268 | 2.24e-47 | 157 |
| Msa0367850 | AT1G02950.4 | 40.278 | 144 | 84 | 2 | 64 | 206 | 60 | 202 | 2.58e-28 | 106 |
| Msa0367850 | AT5G41240.1 | 29.524 | 210 | 139 | 4 | 1 | 204 | 1 | 207 | 1.30e-14 | 72.4 |
| Msa0367850 | AT1G77290.3 | 24.051 | 237 | 148 | 6 | 3 | 208 | 1 | 236 | 1.84e-14 | 70.5 |
| Msa0367850 | AT1G77290.1 | 24.051 | 237 | 148 | 6 | 3 | 208 | 1 | 236 | 1.84e-14 | 70.5 |
| Msa0367850 | AT1G77290.2 | 24.051 | 237 | 148 | 6 | 3 | 208 | 1 | 236 | 1.84e-14 | 70.5 |
| Msa0367850 | AT1G09640.2 | 28.796 | 191 | 123 | 4 | 27 | 211 | 22 | 205 | 3.71e-14 | 69.7 |
| Msa0367850 | AT5G41210.1 | 28.079 | 203 | 139 | 3 | 1 | 197 | 2 | 203 | 1.64e-13 | 67.8 |
| Msa0367850 | AT1G57720.1 | 27.907 | 172 | 112 | 4 | 40 | 208 | 40 | 202 | 3.49e-13 | 67.8 |
| Msa0367850 | AT1G57720.2 | 27.907 | 172 | 112 | 4 | 40 | 208 | 40 | 202 | 3.49e-13 | 67.8 |
| Msa0367850 | AT5G41220.1 | 28.079 | 203 | 139 | 3 | 1 | 197 | 1 | 202 | 6.23e-13 | 67.4 |
| Msa0367850 | AT1G09640.1 | 28.191 | 188 | 122 | 4 | 27 | 208 | 22 | 202 | 7.86e-13 | 67.0 |
Find 50 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATGGTGGTTAAAGTTTA+TGG | 0.134206 | 3_1:-63775966 | Msa0367850:CDS |
| TCTTATTGAGGCAGCAAAAT+TGG | 0.165753 | 3_1:-63773736 | Msa0367850:CDS |
| GATGGTGATTTCAGACTCTT+TGG | 0.307785 | 3_1:-63774808 | Msa0367850:intron |
| GTGCATATTGATCTTGATAA+AGG | 0.322979 | 3_1:-63775873 | Msa0367850:CDS |
| GCTGATCTTAGCCATCTTCC+TGG | 0.323812 | 3_1:-63773768 | Msa0367850:CDS |
| TCTAAAAGCACTTATCTTGC+TGG | 0.332817 | 3_1:-63773807 | Msa0367850:CDS |
| ACTAAAGAGAAGGGGAAATA+TGG | 0.336447 | 3_1:-63775982 | Msa0367850:exon |
| TTGGAAGAAGTTGAAGGAAT+TGG | 0.377135 | 3_1:-63773649 | Msa0367850:CDS |
| AAATCACCATCCTCTACAAC+TGG | 0.411376 | 3_1:+63774820 | None:intergenic |
| TCAATAAGATGTTCAATTCC+AGG | 0.412097 | 3_1:+63773750 | None:intergenic |
| CTTATTGAGGCAGCAAAATT+GGG | 0.415280 | 3_1:-63773735 | Msa0367850:CDS |
| CTGTGATTTGTGTAGAATCA+AGG | 0.424395 | 3_1:-63774079 | Msa0367850:intron |
| TCCTTCAACTTCTTCCAAGC+TGG | 0.444171 | 3_1:+63773654 | None:intergenic |
| CTTCTAAAGTTGTGCCAAGT+AGG | 0.455796 | 3_1:+63774009 | None:intergenic |
| AAAGTTGTGCCAAGTAGGTC+AGG | 0.467376 | 3_1:+63774014 | None:intergenic |
| ACCTGAGTTCCTTCTCCTCC+AGG | 0.473534 | 3_1:-63775838 | Msa0367850:intron |
| AGAAAGCTGTGGTGGATCAA+TGG | 0.498575 | 3_1:-63773986 | Msa0367850:CDS |
| TTTCAAGTAACTAAAGAGAA+GGG | 0.498682 | 3_1:-63775991 | Msa0367850:five_prime_UTR |
| AAATTTCTAGTAGGCCAGCT+TGG | 0.510403 | 3_1:-63773668 | Msa0367850:CDS |
| TGCTGGTGATAAGTTCACTT+TGG | 0.510705 | 3_1:-63773790 | Msa0367850:CDS |
| GGTGGGAGAAAATTTCTAGT+AGG | 0.512715 | 3_1:-63773677 | Msa0367850:CDS |
| TAGAATCAAGGGCTATTGTA+AGG | 0.513820 | 3_1:-63774067 | Msa0367850:CDS |
| AAGTTGAAGGAATTGGCATA+AGG | 0.515297 | 3_1:-63773642 | None:intergenic |
| GATGTTCAATTCCAGGAAGA+TGG | 0.515702 | 3_1:+63773757 | None:intergenic |
| TGGAATTGAACATCTTATTG+AGG | 0.518417 | 3_1:-63773748 | Msa0367850:CDS |
| ACAACTGGAACTTGACCAAA+GGG | 0.534533 | 3_1:+63774835 | None:intergenic |
| TATATACTACCTGGAGGAGA+AGG | 0.540663 | 3_1:+63775829 | None:intergenic |
| TGGTCAAGTTCCAGTTGTAG+AGG | 0.543144 | 3_1:-63774830 | Msa0367850:CDS |
| GACCGTGGTCCTGACCTACT+TGG | 0.545257 | 3_1:-63774023 | Msa0367850:CDS |
| TGAGCTATAGTTATGTCTCC+AGG | 0.558174 | 3_1:+63773882 | None:intergenic |
| TGTGATTTGTGTAGAATCAA+GGG | 0.558216 | 3_1:-63774078 | Msa0367850:intron |
| CAAGTTCCAGTTGTAGAGGA+TGG | 0.575857 | 3_1:-63774826 | Msa0367850:CDS |
| GCCAGCTTGGAAGAAGTTGA+AGG | 0.576600 | 3_1:-63773655 | Msa0367850:CDS |
| AGAGGAAGAATGTGAATGCT+TGG | 0.577760 | 3_1:-63773698 | Msa0367850:CDS |
| TTCAAGTAACTAAAGAGAAG+GGG | 0.585069 | 3_1:-63775990 | Msa0367850:five_prime_UTR |
| TTTAGAAGAGAAAGCTGTGG+TGG | 0.591968 | 3_1:-63773994 | Msa0367850:CDS |
| GAAGAATGTGAATGCTTGGT+GGG | 0.598085 | 3_1:-63773694 | Msa0367850:CDS |
| GGAAGAATGTGAATGCTTGG+TGG | 0.600496 | 3_1:-63773695 | Msa0367850:CDS |
| AAAGAGAAGGGGAAATATGG+TGG | 0.600841 | 3_1:-63775979 | Msa0367850:exon |
| TACAACTGGAACTTGACCAA+AGG | 0.607365 | 3_1:+63774834 | None:intergenic |
| TGGGACATTTGATTAGTGAG+AGG | 0.608261 | 3_1:-63773716 | Msa0367850:CDS |
| TAATGCAGCATGTCCTCAGA+GGG | 0.631190 | 3_1:-63775937 | Msa0367850:CDS |
| ACCTGGAGGAGAAGGAACTC+AGG | 0.631815 | 3_1:+63775837 | None:intergenic |
| AGCATGTCCTCAGAGGGTGA+TGG | 0.631871 | 3_1:-63775931 | Msa0367850:CDS |
| AGGCAAGCCATCACCCTCTG+AGG | 0.647961 | 3_1:+63775924 | None:intergenic |
| TTAATGCAGCATGTCCTCAG+AGG | 0.685889 | 3_1:-63775938 | Msa0367850:CDS |
| AACTTTAGAAGAGAAAGCTG+TGG | 0.697603 | 3_1:-63773997 | Msa0367850:CDS |
| TGCCAAGTAGGTCAGGACCA+CGG | 0.707978 | 3_1:+63774021 | None:intergenic |
| GCAGCAAAGTATGCAGACCG+TGG | 0.728704 | 3_1:-63774038 | Msa0367850:CDS |
| TGCTTGATGTGTATGAACGT+AGG | 0.749850 | 3_1:-63773833 | Msa0367850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATTACAAAAATTTTG+GGG | + | chr3_1:63774327-63774346 | None:intergenic | 10.0% |
| !! | GTTTATATAATAAATTAAGA+GGG | + | chr3_1:63774358-63774377 | None:intergenic | 10.0% |
| !!! | AAAAAATTACAAAAATTTTG+GGG | + | chr3_1:63774327-63774346 | None:intergenic | 10.0% |
| !! | GTTTATATAATAAATTAAGA+GGG | + | chr3_1:63774358-63774377 | None:intergenic | 10.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | - | chr3_1:63774068-63774087 | Msa0367850:intron | 15.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | - | chr3_1:63774068-63774087 | Msa0367850:intron | 15.0% |
| !!! | AGATTTATTATATTGATTGA+TGG | - | chr3_1:63774167-63774186 | Msa0367850:intron | 15.0% |
| !! | GGTTTATATAATAAATTAAG+AGG | + | chr3_1:63774359-63774378 | None:intergenic | 15.0% |
| !! | AAAAATTGCACAATTTATAA+GGG | + | chr3_1:63774380-63774399 | None:intergenic | 15.0% |
| !! | AAAAAATTGCACAATTTATA+AGG | + | chr3_1:63774381-63774400 | None:intergenic | 15.0% |
| !! | CTAGAATTATTATAAAGTTT+GGG | + | chr3_1:63774470-63774489 | None:intergenic | 15.0% |
| !!! | TTTTCATTATGATAATTGTT+TGG | + | chr3_1:63775279-63775298 | None:intergenic | 15.0% |
| !!! | TTTAATTTTCATAGTTTCAT+TGG | - | chr3_1:63775371-63775390 | Msa0367850:intron | 15.0% |
| !!! | GTTTGTATTTTATAATTCAT+GGG | - | chr3_1:63775393-63775412 | Msa0367850:intron | 15.0% |
| !!! | GAGCTTTTAAATATATTATT+AGG | + | chr3_1:63775463-63775482 | None:intergenic | 15.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | - | chr3_1:63774068-63774087 | Msa0367850:intron | 15.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | - | chr3_1:63774068-63774087 | Msa0367850:intron | 15.0% |
| !!! | AGATTTATTATATTGATTGA+TGG | - | chr3_1:63774167-63774186 | Msa0367850:intron | 15.0% |
| !! | GGTTTATATAATAAATTAAG+AGG | + | chr3_1:63774359-63774378 | None:intergenic | 15.0% |
| !! | AAAAATTGCACAATTTATAA+GGG | + | chr3_1:63774380-63774399 | None:intergenic | 15.0% |
| !! | AAAAAATTGCACAATTTATA+AGG | + | chr3_1:63774381-63774400 | None:intergenic | 15.0% |
| !! | CTAGAATTATTATAAAGTTT+GGG | + | chr3_1:63774470-63774489 | None:intergenic | 15.0% |
| !!! | TTTTCATTATGATAATTGTT+TGG | + | chr3_1:63775279-63775298 | None:intergenic | 15.0% |
| !!! | TTTAATTTTCATAGTTTCAT+TGG | - | chr3_1:63775371-63775390 | Msa0367850:intron | 15.0% |
| !!! | GTTTGTATTTTATAATTCAT+GGG | - | chr3_1:63775393-63775412 | Msa0367850:intron | 15.0% |
| !!! | GAGCTTTTAAATATATTATT+AGG | + | chr3_1:63775463-63775482 | None:intergenic | 15.0% |
| !! | TTTATAAACTATATACTACC+TGG | + | chr3_1:63773823-63773842 | None:intergenic | 20.0% |
| !!! | GAAAAATACAAAAGTATCTA+GGG | + | chr3_1:63773854-63773873 | None:intergenic | 20.0% |
| !!! | AGAAAAATACAAAAGTATCT+AGG | + | chr3_1:63773855-63773874 | None:intergenic | 20.0% |
| !! | ACGATCAAGAAATAAAAATA+TGG | - | chr3_1:63773922-63773941 | Msa0367850:CDS | 20.0% |
| !!! | AAAATATGGTTGAGATATTT+TGG | - | chr3_1:63773936-63773955 | Msa0367850:CDS | 20.0% |
| !!! | TTCTCCTCTTTTTTTTATAA+AGG | - | chr3_1:63774007-63774026 | Msa0367850:CDS | 20.0% |
| !! | GATTCTTAAATTTGTATGTA+GGG | + | chr3_1:63774039-63774058 | None:intergenic | 20.0% |
| !! | AGATTCTTAAATTTGTATGT+AGG | + | chr3_1:63774040-63774059 | None:intergenic | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | - | chr3_1:63774067-63774086 | Msa0367850:CDS | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | - | chr3_1:63774067-63774086 | Msa0367850:CDS | 20.0% |
| !! | GCTAGAATTATTATAAAGTT+TGG | + | chr3_1:63774471-63774490 | None:intergenic | 20.0% |
| !! | CACAAAATATTTACTATGTT+GGG | + | chr3_1:63774506-63774525 | None:intergenic | 20.0% |
| !! | AAGAAAAATTGATTACATGA+TGG | + | chr3_1:63774778-63774797 | None:intergenic | 20.0% |
| !! | TTGAAGGTAAGAAATAATTA+AGG | + | chr3_1:63774965-63774984 | None:intergenic | 20.0% |
| !!! | CTTGGTTTTTTTTTTTTTGA+AGG | + | chr3_1:63775036-63775055 | None:intergenic | 20.0% |
| !!! | GGTTTGTATTTTATAATTCA+TGG | - | chr3_1:63775392-63775411 | Msa0367850:intron | 20.0% |
| !!! | AGTAACATGTTATTTTTTCT+AGG | - | chr3_1:63775507-63775526 | Msa0367850:intron | 20.0% |
| !!! | GTAACATGTTATTTTTTCTA+GGG | - | chr3_1:63775508-63775527 | Msa0367850:intron | 20.0% |
| !! | TTTATAAACTATATACTACC+TGG | + | chr3_1:63773823-63773842 | None:intergenic | 20.0% |
| !!! | GAAAAATACAAAAGTATCTA+GGG | + | chr3_1:63773854-63773873 | None:intergenic | 20.0% |
| !!! | AGAAAAATACAAAAGTATCT+AGG | + | chr3_1:63773855-63773874 | None:intergenic | 20.0% |
| !! | ACGATCAAGAAATAAAAATA+TGG | - | chr3_1:63773922-63773941 | Msa0367850:CDS | 20.0% |
| !!! | AAAATATGGTTGAGATATTT+TGG | - | chr3_1:63773936-63773955 | Msa0367850:CDS | 20.0% |
| !!! | TTCTCCTCTTTTTTTTATAA+AGG | - | chr3_1:63774007-63774026 | Msa0367850:CDS | 20.0% |
| !! | GATTCTTAAATTTGTATGTA+GGG | + | chr3_1:63774039-63774058 | None:intergenic | 20.0% |
| !! | AGATTCTTAAATTTGTATGT+AGG | + | chr3_1:63774040-63774059 | None:intergenic | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | - | chr3_1:63774067-63774086 | Msa0367850:CDS | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | - | chr3_1:63774067-63774086 | Msa0367850:CDS | 20.0% |
| !! | GCTAGAATTATTATAAAGTT+TGG | + | chr3_1:63774471-63774490 | None:intergenic | 20.0% |
| !! | CACAAAATATTTACTATGTT+GGG | + | chr3_1:63774506-63774525 | None:intergenic | 20.0% |
| !! | AAGAAAAATTGATTACATGA+TGG | + | chr3_1:63774778-63774797 | None:intergenic | 20.0% |
| !! | TTGAAGGTAAGAAATAATTA+AGG | + | chr3_1:63774965-63774984 | None:intergenic | 20.0% |
| !!! | CTTGGTTTTTTTTTTTTTGA+AGG | + | chr3_1:63775036-63775055 | None:intergenic | 20.0% |
| !!! | GGTTTGTATTTTATAATTCA+TGG | - | chr3_1:63775392-63775411 | Msa0367850:intron | 20.0% |
| !!! | AGTAACATGTTATTTTTTCT+AGG | - | chr3_1:63775507-63775526 | Msa0367850:intron | 20.0% |
| !!! | GTAACATGTTATTTTTTCTA+GGG | - | chr3_1:63775508-63775527 | Msa0367850:intron | 20.0% |
| !!! | TTTTCAAGTAACTAAAGAGA+AGG | - | chr3_1:63773648-63773667 | Msa0367850:CDS | 25.0% |
| !! | TTTCAAGTAACTAAAGAGAA+GGG | - | chr3_1:63773649-63773668 | Msa0367850:CDS | 25.0% |
| ! | AATATGGTGGTTAAAGTTTA+TGG | - | chr3_1:63773674-63773693 | Msa0367850:CDS | 25.0% |
| !!! | TTGAGATATTTTGGTTTGTT+GGG | - | chr3_1:63773945-63773964 | Msa0367850:CDS | 25.0% |
| ! | CACACCTTTATAAAAAAAAG+AGG | + | chr3_1:63774014-63774033 | None:intergenic | 25.0% |
| ! | TTCTTTAACGAAAACAATCA+TGG | + | chr3_1:63774202-63774221 | None:intergenic | 25.0% |
| ! | TTTAAAAATGTGCATCCAAA+GGG | - | chr3_1:63774275-63774294 | Msa0367850:intron | 25.0% |
| ! | AATTTGCAACACATTTATAG+AGG | + | chr3_1:63774441-63774460 | None:intergenic | 25.0% |
| ! | GCACAAAATATTTACTATGT+TGG | + | chr3_1:63774507-63774526 | None:intergenic | 25.0% |
| ! | AATATCTCGTACAACTAAAA+TGG | + | chr3_1:63774539-63774558 | None:intergenic | 25.0% |
| ! | TATTGGTGGAATATAATTGA+AGG | + | chr3_1:63774981-63775000 | None:intergenic | 25.0% |
| !!! | AATATGTGGTGTTGATTTAT+TGG | + | chr3_1:63774998-63775017 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGAGTGTCATGTT+AGG | - | chr3_1:63775235-63775254 | Msa0367850:intron | 25.0% |
| !! | CTGTTAGTTTATTTAAAGAG+AGG | - | chr3_1:63775437-63775456 | Msa0367850:intron | 25.0% |
| ! | GCAAAATAAAGTAACATGTT+AGG | - | chr3_1:63775530-63775549 | Msa0367850:intron | 25.0% |
| ! | TCTTGTAATTCTACCAAAAA+TGG | - | chr3_1:63775730-63775749 | Msa0367850:intron | 25.0% |
| ! | CTTGTAATTCTACCAAAAAT+GGG | - | chr3_1:63775731-63775750 | Msa0367850:intron | 25.0% |
| !!! | TTTTCAAGTAACTAAAGAGA+AGG | - | chr3_1:63773648-63773667 | Msa0367850:CDS | 25.0% |
| !! | TTTCAAGTAACTAAAGAGAA+GGG | - | chr3_1:63773649-63773668 | Msa0367850:CDS | 25.0% |
| ! | AATATGGTGGTTAAAGTTTA+TGG | - | chr3_1:63773674-63773693 | Msa0367850:CDS | 25.0% |
| !!! | TTGAGATATTTTGGTTTGTT+GGG | - | chr3_1:63773945-63773964 | Msa0367850:CDS | 25.0% |
| ! | CACACCTTTATAAAAAAAAG+AGG | + | chr3_1:63774014-63774033 | None:intergenic | 25.0% |
| ! | TTCTTTAACGAAAACAATCA+TGG | + | chr3_1:63774202-63774221 | None:intergenic | 25.0% |
| ! | TTTAAAAATGTGCATCCAAA+GGG | - | chr3_1:63774275-63774294 | Msa0367850:intron | 25.0% |
| ! | AATTTGCAACACATTTATAG+AGG | + | chr3_1:63774441-63774460 | None:intergenic | 25.0% |
| ! | GCACAAAATATTTACTATGT+TGG | + | chr3_1:63774507-63774526 | None:intergenic | 25.0% |
| ! | AATATCTCGTACAACTAAAA+TGG | + | chr3_1:63774539-63774558 | None:intergenic | 25.0% |
| ! | TATTGGTGGAATATAATTGA+AGG | + | chr3_1:63774981-63775000 | None:intergenic | 25.0% |
| !!! | AATATGTGGTGTTGATTTAT+TGG | + | chr3_1:63774998-63775017 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGAGTGTCATGTT+AGG | - | chr3_1:63775235-63775254 | Msa0367850:intron | 25.0% |
| !! | CTGTTAGTTTATTTAAAGAG+AGG | - | chr3_1:63775437-63775456 | Msa0367850:intron | 25.0% |
| ! | GCAAAATAAAGTAACATGTT+AGG | - | chr3_1:63775530-63775549 | Msa0367850:intron | 25.0% |
| ! | TCTTGTAATTCTACCAAAAA+TGG | - | chr3_1:63775730-63775749 | Msa0367850:intron | 25.0% |
| ! | CTTGTAATTCTACCAAAAAT+GGG | - | chr3_1:63775731-63775750 | Msa0367850:intron | 25.0% |
| TTCAAGTAACTAAAGAGAAG+GGG | - | chr3_1:63773650-63773669 | Msa0367850:CDS | 30.0% | |
| ! | ATTCTACCTCTTTTTCTAAG+AGG | + | chr3_1:63773739-63773758 | None:intergenic | 30.0% |
| GTGCATATTGATCTTGATAA+AGG | - | chr3_1:63773767-63773786 | Msa0367850:CDS | 30.0% | |
| ATAAACTATATACTACCTGG+AGG | + | chr3_1:63773820-63773839 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTCGTAAATGAT+AGG | - | chr3_1:63773897-63773916 | Msa0367850:CDS | 30.0% |
| !!! | GTTGAGATATTTTGGTTTGT+TGG | - | chr3_1:63773944-63773963 | Msa0367850:CDS | 30.0% |
| TGAAGAGAAATGAGTAATTG+TGG | - | chr3_1:63774252-63774271 | Msa0367850:intron | 30.0% | |
| GTTTAAAAATGTGCATCCAA+AGG | - | chr3_1:63774274-63774293 | Msa0367850:intron | 30.0% | |
| CGAGTAGAATCAAAGATATA+TGG | + | chr3_1:63774726-63774745 | None:intergenic | 30.0% | |
| ACTCTCTTGGTTTAAATATG+TGG | + | chr3_1:63775012-63775031 | None:intergenic | 30.0% | |
| !!! | TTTTTTTGAAGGAACTCTCT+TGG | + | chr3_1:63775025-63775044 | None:intergenic | 30.0% |
| !! | TAAAGAGTATCGATTAGGTA+CGG | + | chr3_1:63775103-63775122 | None:intergenic | 30.0% |
| !! | GACTTTAAAGAGTATCGATT+AGG | + | chr3_1:63775108-63775127 | None:intergenic | 30.0% |
| TAATTCATGGGTATCCATAT+TGG | - | chr3_1:63775405-63775424 | Msa0367850:intron | 30.0% | |
| AACAGATTAACAAGCCAATA+TGG | + | chr3_1:63775422-63775441 | None:intergenic | 30.0% | |
| ! | TGTGATTTGTGTAGAATCAA+GGG | - | chr3_1:63775562-63775581 | Msa0367850:intron | 30.0% |
| TCAATAAGATGTTCAATTCC+AGG | + | chr3_1:63775893-63775912 | None:intergenic | 30.0% | |
| TGGAATTGAACATCTTATTG+AGG | - | chr3_1:63775892-63775911 | Msa0367850:CDS | 30.0% | |
| TTCAAGTAACTAAAGAGAAG+GGG | - | chr3_1:63773650-63773669 | Msa0367850:CDS | 30.0% | |
| ! | ATTCTACCTCTTTTTCTAAG+AGG | + | chr3_1:63773739-63773758 | None:intergenic | 30.0% |
| GTGCATATTGATCTTGATAA+AGG | - | chr3_1:63773767-63773786 | Msa0367850:CDS | 30.0% | |
| ATAAACTATATACTACCTGG+AGG | + | chr3_1:63773820-63773839 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTCGTAAATGAT+AGG | - | chr3_1:63773897-63773916 | Msa0367850:CDS | 30.0% |
| !!! | GTTGAGATATTTTGGTTTGT+TGG | - | chr3_1:63773944-63773963 | Msa0367850:CDS | 30.0% |
| TGAAGAGAAATGAGTAATTG+TGG | - | chr3_1:63774252-63774271 | Msa0367850:intron | 30.0% | |
| GTTTAAAAATGTGCATCCAA+AGG | - | chr3_1:63774274-63774293 | Msa0367850:intron | 30.0% | |
| CGAGTAGAATCAAAGATATA+TGG | + | chr3_1:63774726-63774745 | None:intergenic | 30.0% | |
| ACTCTCTTGGTTTAAATATG+TGG | + | chr3_1:63775012-63775031 | None:intergenic | 30.0% | |
| !!! | TTTTTTTGAAGGAACTCTCT+TGG | + | chr3_1:63775025-63775044 | None:intergenic | 30.0% |
| !! | TAAAGAGTATCGATTAGGTA+CGG | + | chr3_1:63775103-63775122 | None:intergenic | 30.0% |
| !! | GACTTTAAAGAGTATCGATT+AGG | + | chr3_1:63775108-63775127 | None:intergenic | 30.0% |
| TAATTCATGGGTATCCATAT+TGG | - | chr3_1:63775405-63775424 | Msa0367850:intron | 30.0% | |
| AACAGATTAACAAGCCAATA+TGG | + | chr3_1:63775422-63775441 | None:intergenic | 30.0% | |
| ! | TGTGATTTGTGTAGAATCAA+GGG | - | chr3_1:63775562-63775581 | Msa0367850:intron | 30.0% |
| TCAATAAGATGTTCAATTCC+AGG | + | chr3_1:63775893-63775912 | None:intergenic | 30.0% | |
| TGGAATTGAACATCTTATTG+AGG | - | chr3_1:63775892-63775911 | Msa0367850:CDS | 30.0% | |
| ACTAAAGAGAAGGGGAAATA+TGG | - | chr3_1:63773658-63773677 | Msa0367850:CDS | 35.0% | |
| !!! | AGATATTTTGGTTTGTTGGG+TGG | - | chr3_1:63773948-63773967 | Msa0367850:CDS | 35.0% |
| ACAAAACTTACACCTACACT+AGG | - | chr3_1:63774229-63774248 | Msa0367850:intron | 35.0% | |
| !!! | TTACAAAAATTTTGGGGCAG+AGG | + | chr3_1:63774321-63774340 | None:intergenic | 35.0% |
| ATTTACTATGTTGGGTGTAG+TGG | + | chr3_1:63774498-63774517 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTTGCAGCCCTT+TGG | - | chr3_1:63774790-63774809 | Msa0367850:intron | 35.0% |
| ACTCTTTGGTGAGAATTTGT+TGG | - | chr3_1:63774846-63774865 | Msa0367850:intron | 35.0% | |
| !! | ATGTGGTGTTGATTTATTGG+TGG | + | chr3_1:63774995-63775014 | None:intergenic | 35.0% |
| !! | AAAGAGTATCGATTAGGTAC+GGG | + | chr3_1:63775102-63775121 | None:intergenic | 35.0% |
| ! | CTGTGATTTGTGTAGAATCA+AGG | - | chr3_1:63775561-63775580 | Msa0367850:intron | 35.0% |
| TAGAATCAAGGGCTATTGTA+AGG | - | chr3_1:63775573-63775592 | Msa0367850:intron | 35.0% | |
| ! | AACTTTAGAAGAGAAAGCTG+TGG | - | chr3_1:63775643-63775662 | Msa0367850:intron | 35.0% |
| !! | TCTAAAAGCACTTATCTTGC+TGG | - | chr3_1:63775833-63775852 | Msa0367850:intron | 35.0% |
| TCTTATTGAGGCAGCAAAAT+TGG | - | chr3_1:63775904-63775923 | Msa0367850:CDS | 35.0% | |
| CTTATTGAGGCAGCAAAATT+GGG | - | chr3_1:63775905-63775924 | Msa0367850:CDS | 35.0% | |
| TTGGAAGAAGTTGAAGGAAT+TGG | - | chr3_1:63775991-63776010 | Msa0367850:five_prime_UTR | 35.0% | |
| AAGTTGAAGGAATTGGCATA+AGG | - | chr3_1:63775998-63776017 | Msa0367850:five_prime_UTR | 35.0% | |
| ACTAAAGAGAAGGGGAAATA+TGG | - | chr3_1:63773658-63773677 | Msa0367850:CDS | 35.0% | |
| !!! | AGATATTTTGGTTTGTTGGG+TGG | - | chr3_1:63773948-63773967 | Msa0367850:CDS | 35.0% |
| ACAAAACTTACACCTACACT+AGG | - | chr3_1:63774229-63774248 | Msa0367850:intron | 35.0% | |
| !!! | TTACAAAAATTTTGGGGCAG+AGG | + | chr3_1:63774321-63774340 | None:intergenic | 35.0% |
| ATTTACTATGTTGGGTGTAG+TGG | + | chr3_1:63774498-63774517 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTTGCAGCCCTT+TGG | - | chr3_1:63774790-63774809 | Msa0367850:intron | 35.0% |
| ACTCTTTGGTGAGAATTTGT+TGG | - | chr3_1:63774846-63774865 | Msa0367850:intron | 35.0% | |
| !! | ATGTGGTGTTGATTTATTGG+TGG | + | chr3_1:63774995-63775014 | None:intergenic | 35.0% |
| !! | AAAGAGTATCGATTAGGTAC+GGG | + | chr3_1:63775102-63775121 | None:intergenic | 35.0% |
| ! | CTGTGATTTGTGTAGAATCA+AGG | - | chr3_1:63775561-63775580 | Msa0367850:intron | 35.0% |
| TAGAATCAAGGGCTATTGTA+AGG | - | chr3_1:63775573-63775592 | Msa0367850:intron | 35.0% | |
| ! | AACTTTAGAAGAGAAAGCTG+TGG | - | chr3_1:63775643-63775662 | Msa0367850:intron | 35.0% |
| !! | TCTAAAAGCACTTATCTTGC+TGG | - | chr3_1:63775833-63775852 | Msa0367850:intron | 35.0% |
| TCTTATTGAGGCAGCAAAAT+TGG | - | chr3_1:63775904-63775923 | Msa0367850:CDS | 35.0% | |
| CTTATTGAGGCAGCAAAATT+GGG | - | chr3_1:63775905-63775924 | Msa0367850:CDS | 35.0% | |
| TTGGAAGAAGTTGAAGGAAT+TGG | - | chr3_1:63775991-63776010 | Msa0367850:five_prime_UTR | 35.0% | |
| AAAGAGAAGGGGAAATATGG+TGG | - | chr3_1:63773661-63773680 | Msa0367850:CDS | 40.0% | |
| TATATACTACCTGGAGGAGA+AGG | + | chr3_1:63773814-63773833 | None:intergenic | 40.0% | |
| CATTTCTCTTCACCTAGTGT+AGG | + | chr3_1:63774244-63774263 | None:intergenic | 40.0% | |
| AAAAATGTGCATCCAAAGGG+CGG | - | chr3_1:63774278-63774297 | Msa0367850:intron | 40.0% | |
| ACAACTGGAACTTGACCAAA+GGG | + | chr3_1:63774808-63774827 | None:intergenic | 40.0% | |
| TACAACTGGAACTTGACCAA+AGG | + | chr3_1:63774809-63774828 | None:intergenic | 40.0% | |
| AAATCACCATCCTCTACAAC+TGG | + | chr3_1:63774823-63774842 | None:intergenic | 40.0% | |
| GATGGTGATTTCAGACTCTT+TGG | - | chr3_1:63774832-63774851 | Msa0367850:CDS | 40.0% | |
| GACAGACATTACGTCATGTT+AGG | - | chr3_1:63775208-63775227 | Msa0367850:intron | 40.0% | |
| ATATTTGCGCGAGCTTTCTA+AGG | + | chr3_1:63775307-63775326 | None:intergenic | 40.0% | |
| !! | CTTCTAAAGTTGTGCCAAGT+AGG | + | chr3_1:63775634-63775653 | None:intergenic | 40.0% |
| TTTAGAAGAGAAAGCTGTGG+TGG | - | chr3_1:63775646-63775665 | Msa0367850:intron | 40.0% | |
| TGAGCTATAGTTATGTCTCC+AGG | + | chr3_1:63775761-63775780 | None:intergenic | 40.0% | |
| TGCTTGATGTGTATGAACGT+AGG | - | chr3_1:63775807-63775826 | Msa0367850:intron | 40.0% | |
| TGCTGGTGATAAGTTCACTT+TGG | - | chr3_1:63775850-63775869 | Msa0367850:CDS | 40.0% | |
| GATGTTCAATTCCAGGAAGA+TGG | + | chr3_1:63775886-63775905 | None:intergenic | 40.0% | |
| TGGGACATTTGATTAGTGAG+AGG | - | chr3_1:63775924-63775943 | Msa0367850:CDS | 40.0% | |
| AGAGGAAGAATGTGAATGCT+TGG | - | chr3_1:63775942-63775961 | Msa0367850:CDS | 40.0% | |
| GAAGAATGTGAATGCTTGGT+GGG | - | chr3_1:63775946-63775965 | Msa0367850:CDS | 40.0% | |
| !! | GGTGGGAGAAAATTTCTAGT+AGG | - | chr3_1:63775963-63775982 | Msa0367850:CDS | 40.0% |
| !! | AAATTTCTAGTAGGCCAGCT+TGG | - | chr3_1:63775972-63775991 | Msa0367850:exon | 40.0% |
| AAAGAGAAGGGGAAATATGG+TGG | - | chr3_1:63773661-63773680 | Msa0367850:CDS | 40.0% | |
| TATATACTACCTGGAGGAGA+AGG | + | chr3_1:63773814-63773833 | None:intergenic | 40.0% | |
| CATTTCTCTTCACCTAGTGT+AGG | + | chr3_1:63774244-63774263 | None:intergenic | 40.0% | |
| AAAAATGTGCATCCAAAGGG+CGG | - | chr3_1:63774278-63774297 | Msa0367850:intron | 40.0% | |
| ACAACTGGAACTTGACCAAA+GGG | + | chr3_1:63774808-63774827 | None:intergenic | 40.0% | |
| TACAACTGGAACTTGACCAA+AGG | + | chr3_1:63774809-63774828 | None:intergenic | 40.0% | |
| AAATCACCATCCTCTACAAC+TGG | + | chr3_1:63774823-63774842 | None:intergenic | 40.0% | |
| GATGGTGATTTCAGACTCTT+TGG | - | chr3_1:63774832-63774851 | Msa0367850:CDS | 40.0% | |
| GACAGACATTACGTCATGTT+AGG | - | chr3_1:63775208-63775227 | Msa0367850:intron | 40.0% | |
| ATATTTGCGCGAGCTTTCTA+AGG | + | chr3_1:63775307-63775326 | None:intergenic | 40.0% | |
| !! | CTTCTAAAGTTGTGCCAAGT+AGG | + | chr3_1:63775634-63775653 | None:intergenic | 40.0% |
| TTTAGAAGAGAAAGCTGTGG+TGG | - | chr3_1:63775646-63775665 | Msa0367850:intron | 40.0% | |
| TGAGCTATAGTTATGTCTCC+AGG | + | chr3_1:63775761-63775780 | None:intergenic | 40.0% | |
| TGCTTGATGTGTATGAACGT+AGG | - | chr3_1:63775807-63775826 | Msa0367850:intron | 40.0% | |
| TGCTGGTGATAAGTTCACTT+TGG | - | chr3_1:63775850-63775869 | Msa0367850:CDS | 40.0% | |
| GATGTTCAATTCCAGGAAGA+TGG | + | chr3_1:63775886-63775905 | None:intergenic | 40.0% | |
| TGGGACATTTGATTAGTGAG+AGG | - | chr3_1:63775924-63775943 | Msa0367850:CDS | 40.0% | |
| AGAGGAAGAATGTGAATGCT+TGG | - | chr3_1:63775942-63775961 | Msa0367850:CDS | 40.0% | |
| GAAGAATGTGAATGCTTGGT+GGG | - | chr3_1:63775946-63775965 | Msa0367850:CDS | 40.0% | |
| !! | GGTGGGAGAAAATTTCTAGT+AGG | - | chr3_1:63775963-63775982 | Msa0367850:CDS | 40.0% |
| !! | AAATTTCTAGTAGGCCAGCT+TGG | - | chr3_1:63775972-63775991 | Msa0367850:exon | 40.0% |
| TTAATGCAGCATGTCCTCAG+AGG | - | chr3_1:63773702-63773721 | Msa0367850:CDS | 45.0% | |
| TAATGCAGCATGTCCTCAGA+GGG | - | chr3_1:63773703-63773722 | Msa0367850:CDS | 45.0% | |
| GGCTTGCCTCTTAGAAAAAG+AGG | - | chr3_1:63773730-63773749 | Msa0367850:CDS | 45.0% | |
| TACTATGTTGGGTGTAGTGG+CGG | + | chr3_1:63774495-63774514 | None:intergenic | 45.0% | |
| TGGTCAAGTTCCAGTTGTAG+AGG | - | chr3_1:63774810-63774829 | Msa0367850:CDS | 45.0% | |
| CAAGTTCCAGTTGTAGAGGA+TGG | - | chr3_1:63774814-63774833 | Msa0367850:CDS | 45.0% | |
| !! | AAACCAAGAGAGAGCACCAA+TGG | - | chr3_1:63775048-63775067 | Msa0367850:intron | 45.0% |
| !! | AACCAAGAGAGAGCACCAAT+GGG | - | chr3_1:63775049-63775068 | Msa0367850:intron | 45.0% |
| !! | GTATCGATTAGGTACGGGTT+TGG | + | chr3_1:63775097-63775116 | None:intergenic | 45.0% |
| AAAGTTGTGCCAAGTAGGTC+AGG | + | chr3_1:63775629-63775648 | None:intergenic | 45.0% | |
| !! | AGAAAGCTGTGGTGGATCAA+TGG | - | chr3_1:63775654-63775673 | Msa0367850:intron | 45.0% |
| CTACCAAAAATGGGTAAGCC+TGG | - | chr3_1:63775740-63775759 | Msa0367850:intron | 45.0% | |
| ! | TCTCCAGGCTTACCCATTTT+TGG | + | chr3_1:63775746-63775765 | None:intergenic | 45.0% |
| GGAAGAATGTGAATGCTTGG+TGG | - | chr3_1:63775945-63775964 | Msa0367850:CDS | 45.0% | |
| TCCTTCAACTTCTTCCAAGC+TGG | + | chr3_1:63775989-63776008 | None:intergenic | 45.0% | |
| TTAATGCAGCATGTCCTCAG+AGG | - | chr3_1:63773702-63773721 | Msa0367850:CDS | 45.0% | |
| TAATGCAGCATGTCCTCAGA+GGG | - | chr3_1:63773703-63773722 | Msa0367850:CDS | 45.0% | |
| GGCTTGCCTCTTAGAAAAAG+AGG | - | chr3_1:63773730-63773749 | Msa0367850:CDS | 45.0% | |
| TACTATGTTGGGTGTAGTGG+CGG | + | chr3_1:63774495-63774514 | None:intergenic | 45.0% | |
| TGGTCAAGTTCCAGTTGTAG+AGG | - | chr3_1:63774810-63774829 | Msa0367850:CDS | 45.0% | |
| CAAGTTCCAGTTGTAGAGGA+TGG | - | chr3_1:63774814-63774833 | Msa0367850:CDS | 45.0% | |
| !! | AAACCAAGAGAGAGCACCAA+TGG | - | chr3_1:63775048-63775067 | Msa0367850:intron | 45.0% |
| !! | AACCAAGAGAGAGCACCAAT+GGG | - | chr3_1:63775049-63775068 | Msa0367850:intron | 45.0% |
| !! | GTATCGATTAGGTACGGGTT+TGG | + | chr3_1:63775097-63775116 | None:intergenic | 45.0% |
| AAAGTTGTGCCAAGTAGGTC+AGG | + | chr3_1:63775629-63775648 | None:intergenic | 45.0% | |
| !! | AGAAAGCTGTGGTGGATCAA+TGG | - | chr3_1:63775654-63775673 | Msa0367850:intron | 45.0% |
| CTACCAAAAATGGGTAAGCC+TGG | - | chr3_1:63775740-63775759 | Msa0367850:intron | 45.0% | |
| ! | TCTCCAGGCTTACCCATTTT+TGG | + | chr3_1:63775746-63775765 | None:intergenic | 45.0% |
| GGAAGAATGTGAATGCTTGG+TGG | - | chr3_1:63775945-63775964 | Msa0367850:CDS | 45.0% | |
| TCCTTCAACTTCTTCCAAGC+TGG | + | chr3_1:63775989-63776008 | None:intergenic | 45.0% | |
| !! | AAAAATATTATTGAATAAAA+AGG | + | chr3_1:63773880-63773899 | None:intergenic | 5.0% |
| !!! | TAAAAAATTACAAAAATTTT+GGG | + | chr3_1:63774328-63774347 | None:intergenic | 5.0% |
| !!! | ATAAAAAATTACAAAAATTT+TGG | + | chr3_1:63774329-63774348 | None:intergenic | 5.0% |
| !! | AAAAATATTATTGAATAAAA+AGG | + | chr3_1:63773880-63773899 | None:intergenic | 5.0% |
| !!! | TAAAAAATTACAAAAATTTT+GGG | + | chr3_1:63774328-63774347 | None:intergenic | 5.0% |
| !!! | ATAAAAAATTACAAAAATTT+TGG | + | chr3_1:63774329-63774348 | None:intergenic | 5.0% |
| !! | ACCAAGAGAGAGCACCAATG+GGG | - | chr3_1:63775050-63775069 | Msa0367850:intron | 50.0% |
| ! | TACGGGTTTGGTATCCCATG+TGG | + | chr3_1:63775085-63775104 | None:intergenic | 50.0% |
| GCTGATCTTAGCCATCTTCC+TGG | - | chr3_1:63775872-63775891 | Msa0367850:CDS | 50.0% | |
| GCCAGCTTGGAAGAAGTTGA+AGG | - | chr3_1:63775985-63776004 | Msa0367850:exon | 50.0% | |
| !! | ACCAAGAGAGAGCACCAATG+GGG | - | chr3_1:63775050-63775069 | Msa0367850:intron | 50.0% |
| ! | TACGGGTTTGGTATCCCATG+TGG | + | chr3_1:63775085-63775104 | None:intergenic | 50.0% |
| GCTGATCTTAGCCATCTTCC+TGG | - | chr3_1:63775872-63775891 | Msa0367850:CDS | 50.0% | |
| GCCAGCTTGGAAGAAGTTGA+AGG | - | chr3_1:63775985-63776004 | Msa0367850:exon | 50.0% | |
| AGCATGTCCTCAGAGGGTGA+TGG | - | chr3_1:63773709-63773728 | Msa0367850:CDS | 55.0% | |
| ACCTGAGTTCCTTCTCCTCC+AGG | - | chr3_1:63773802-63773821 | Msa0367850:CDS | 55.0% | |
| ACCTGGAGGAGAAGGAACTC+AGG | + | chr3_1:63773806-63773825 | None:intergenic | 55.0% | |
| GCATCCAAAGGGCGGTTTCA+AGG | - | chr3_1:63774286-63774305 | Msa0367850:intron | 55.0% | |
| !!! | ATTTTGGGGCAGAGGCTCAC+CGG | + | chr3_1:63774313-63774332 | None:intergenic | 55.0% |
| ! | TCCCCATTGGTGCTCTCTCT+TGG | + | chr3_1:63775054-63775073 | None:intergenic | 55.0% |
| GCAGCAAAGTATGCAGACCG+TGG | - | chr3_1:63775602-63775621 | Msa0367850:intron | 55.0% | |
| TGCCAAGTAGGTCAGGACCA+CGG | + | chr3_1:63775622-63775641 | None:intergenic | 55.0% | |
| AGCATGTCCTCAGAGGGTGA+TGG | - | chr3_1:63773709-63773728 | Msa0367850:CDS | 55.0% | |
| ACCTGAGTTCCTTCTCCTCC+AGG | - | chr3_1:63773802-63773821 | Msa0367850:CDS | 55.0% | |
| ACCTGGAGGAGAAGGAACTC+AGG | + | chr3_1:63773806-63773825 | None:intergenic | 55.0% | |
| GCATCCAAAGGGCGGTTTCA+AGG | - | chr3_1:63774286-63774305 | Msa0367850:intron | 55.0% | |
| !!! | ATTTTGGGGCAGAGGCTCAC+CGG | + | chr3_1:63774313-63774332 | None:intergenic | 55.0% |
| ! | TCCCCATTGGTGCTCTCTCT+TGG | + | chr3_1:63775054-63775073 | None:intergenic | 55.0% |
| GCAGCAAAGTATGCAGACCG+TGG | - | chr3_1:63775602-63775621 | Msa0367850:intron | 55.0% | |
| TGCCAAGTAGGTCAGGACCA+CGG | + | chr3_1:63775622-63775641 | None:intergenic | 55.0% | |
| AGGCAAGCCATCACCCTCTG+AGG | + | chr3_1:63773719-63773738 | None:intergenic | 60.0% | |
| CAAAGGGCGGTTTCAAGGCC+CGG | - | chr3_1:63774291-63774310 | Msa0367850:intron | 60.0% | |
| !!! | TTTTGGGGCAGAGGCTCACC+GGG | + | chr3_1:63774312-63774331 | None:intergenic | 60.0% |
| GAGCACCAATGGGGACGACA+TGG | - | chr3_1:63775059-63775078 | Msa0367850:intron | 60.0% | |
| TGTGGCCATGTCGTCCCCAT+TGG | + | chr3_1:63775067-63775086 | None:intergenic | 60.0% | |
| ATGGGGACGACATGGCCACA+TGG | - | chr3_1:63775067-63775086 | Msa0367850:intron | 60.0% | |
| TGGGGACGACATGGCCACAT+GGG | - | chr3_1:63775068-63775087 | Msa0367850:intron | 60.0% | |
| GACCGTGGTCCTGACCTACT+TGG | - | chr3_1:63775617-63775636 | Msa0367850:intron | 60.0% | |
| AGGCAAGCCATCACCCTCTG+AGG | + | chr3_1:63773719-63773738 | None:intergenic | 60.0% | |
| CAAAGGGCGGTTTCAAGGCC+CGG | - | chr3_1:63774291-63774310 | Msa0367850:intron | 60.0% | |
| !!! | TTTTGGGGCAGAGGCTCACC+GGG | + | chr3_1:63774312-63774331 | None:intergenic | 60.0% |
| GAGCACCAATGGGGACGACA+TGG | - | chr3_1:63775059-63775078 | Msa0367850:intron | 60.0% | |
| TGTGGCCATGTCGTCCCCAT+TGG | + | chr3_1:63775067-63775086 | None:intergenic | 60.0% | |
| ATGGGGACGACATGGCCACA+TGG | - | chr3_1:63775067-63775086 | Msa0367850:intron | 60.0% | |
| TGGGGACGACATGGCCACAT+GGG | - | chr3_1:63775068-63775087 | Msa0367850:intron | 60.0% | |
| GACCGTGGTCCTGACCTACT+TGG | - | chr3_1:63775617-63775636 | Msa0367850:intron | 60.0% | |
| CGGGCCTTGAAACCGCCCTT+TGG | + | chr3_1:63774293-63774312 | None:intergenic | 65.0% | |
| CGGGCCTTGAAACCGCCCTT+TGG | + | chr3_1:63774293-63774312 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 63773644 | 63776018 | 63773644 | ID=Msa0367850;Name=Msa0367850 |
| chr3_1 | mRNA | 63773644 | 63776018 | 63773644 | ID=Msa0367850-mRNA-1;Parent=Msa0367850;Name=Msa0367850-mRNA-1;_AED=0.02;_eAED=0.02;_QI=33|1|0.66|1|1|1|3|0|212 |
| chr3_1 | exon | 63773644 | 63774086 | 63773644 | ID=Msa0367850-mRNA-1:exon:12677;Parent=Msa0367850-mRNA-1 |
| chr3_1 | exon | 63774809 | 63774857 | 63774809 | ID=Msa0367850-mRNA-1:exon:12676;Parent=Msa0367850-mRNA-1 |
| chr3_1 | exon | 63775839 | 63776018 | 63775839 | ID=Msa0367850-mRNA-1:exon:12675;Parent=Msa0367850-mRNA-1 |
| chr3_1 | five_prime_UTR | 63775986 | 63776018 | 63775986 | ID=Msa0367850-mRNA-1:five_prime_utr;Parent=Msa0367850-mRNA-1 |
| chr3_1 | CDS | 63775839 | 63775985 | 63775839 | ID=Msa0367850-mRNA-1:cds;Parent=Msa0367850-mRNA-1 |
| chr3_1 | CDS | 63774809 | 63774857 | 63774809 | ID=Msa0367850-mRNA-1:cds;Parent=Msa0367850-mRNA-1 |
| chr3_1 | CDS | 63773644 | 63774086 | 63773644 | ID=Msa0367850-mRNA-1:cds;Parent=Msa0367850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
