Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460980 | XP_003600650.2 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 1.84e-151 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460980 | sp|Q96324|GSTFB_ARATH | 58.491 | 212 | 88 | 0 | 1 | 212 | 1 | 212 | 3.19e-92 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460980 | A0A2Z2Z7E2 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 8.79e-152 | 429 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010560 | Msa0460980 | 0.861605 | 9.121806e-64 | -8.615850e-47 |
| Msa0050990 | Msa0460980 | 0.883003 | 6.478058e-71 | -8.615850e-47 |
| Msa0101300 | Msa0460980 | 0.877861 | 4.472915e-69 | -8.615850e-47 |
| Msa0145600 | Msa0460980 | 0.815498 | 8.962469e-52 | -8.615850e-47 |
| Msa0193890 | Msa0460980 | 0.801249 | 9.841893e-49 | -8.615850e-47 |
| Msa0367850 | Msa0460980 | 0.821801 | 3.329089e-53 | -8.615850e-47 |
| Msa0368080 | Msa0460980 | 0.989311 | 1.406612e-177 | -8.615850e-47 |
| Msa0415620 | Msa0460980 | 0.817436 | 3.301028e-52 | -8.615850e-47 |
| Msa0460620 | Msa0460980 | 0.823028 | 1.726433e-53 | -8.615850e-47 |
| Msa0460980 | Msa0506980 | 0.898943 | 3.231697e-77 | -8.615850e-47 |
| Msa0460980 | Msa0740640 | 0.806712 | 7.201314e-50 | -8.615850e-47 |
| Msa0460980 | Msa0754030 | 0.823869 | 1.098045e-53 | -8.615850e-47 |
| Msa0460980 | Msa0807110 | 0.833268 | 5.880032e-56 | -8.615850e-47 |
| Msa0460980 | Msa0833040 | 0.838297 | 3.126319e-57 | -8.615850e-47 |
| Msa0460980 | Msa1408870 | 0.833560 | 4.971665e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460980 | MtrunA17_Chr3g0109891 | 98.585 | 212 | 3 | 0 | 1 | 212 | 1 | 212 | 1.69e-155 | 429 |
| Msa0460980 | MtrunA17_Chr3g0095781 | 58.768 | 211 | 86 | 1 | 1 | 211 | 1 | 210 | 1.22e-88 | 259 |
| Msa0460980 | MtrunA17_Chr5g0442751 | 55.869 | 213 | 88 | 4 | 1 | 210 | 1 | 210 | 9.06e-81 | 240 |
| Msa0460980 | MtrunA17_Chr5g0442741 | 52.582 | 213 | 97 | 3 | 1 | 211 | 1 | 211 | 1.65e-76 | 229 |
| Msa0460980 | MtrunA17_Chr3g0095821 | 56.098 | 164 | 72 | 0 | 48 | 211 | 1 | 164 | 9.88e-69 | 207 |
| Msa0460980 | MtrunA17_Chr1g0157211 | 45.794 | 214 | 111 | 2 | 3 | 211 | 5 | 218 | 2.31e-62 | 193 |
| Msa0460980 | MtrunA17_Chr1g0195811 | 43.961 | 207 | 115 | 1 | 2 | 208 | 3 | 208 | 1.87e-59 | 186 |
| Msa0460980 | MtrunA17_Chr1g0195821 | 44.928 | 207 | 113 | 1 | 2 | 208 | 3 | 208 | 2.85e-58 | 182 |
| Msa0460980 | MtrunA17_Chr1g0195831 | 43.062 | 209 | 117 | 2 | 1 | 208 | 1 | 208 | 2.79e-57 | 180 |
| Msa0460980 | MtrunA17_Chr8g0386711 | 26.667 | 210 | 147 | 3 | 1 | 203 | 1 | 210 | 4.26e-14 | 68.9 |
| Msa0460980 | MtrunA17_Chr3g0095811 | 61.224 | 49 | 18 | 1 | 1 | 49 | 1 | 48 | 4.01e-13 | 62.4 |
| Msa0460980 | MtrunA17_Chr4g0076691 | 28.856 | 201 | 124 | 5 | 5 | 202 | 18 | 202 | 6.51e-13 | 65.5 |
| Msa0460980 | MtrunA17_Chr2g0276951 | 29.651 | 172 | 108 | 6 | 40 | 208 | 42 | 203 | 9.05e-13 | 66.2 |
| Msa0460980 | MtrunA17_Chr4g0076681 | 35.849 | 106 | 67 | 1 | 5 | 110 | 18 | 122 | 9.44e-13 | 65.1 |
| Msa0460980 | MtrunA17_Chr1g0198101 | 46.032 | 63 | 33 | 1 | 146 | 208 | 1 | 62 | 1.81e-12 | 60.5 |
| Msa0460980 | MtrunA17_Chr0c12g0493651 | 28.324 | 173 | 110 | 4 | 40 | 208 | 40 | 202 | 1.02e-11 | 63.2 |
| Msa0460980 | MtrunA17_Chr4g0076641 | 32.787 | 122 | 77 | 3 | 4 | 125 | 15 | 131 | 1.56e-11 | 60.1 |
| Msa0460980 | MtrunA17_Chr8g0386701 | 26.627 | 169 | 121 | 1 | 3 | 168 | 5 | 173 | 3.86e-11 | 60.8 |
| Msa0460980 | MtrunA17_Chr3g0125261 | 21.397 | 229 | 141 | 5 | 15 | 208 | 13 | 237 | 7.85e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460980 | AT3G03190.1 | 58.491 | 212 | 88 | 0 | 1 | 212 | 1 | 212 | 3.24e-93 | 271 |
| Msa0460980 | AT5G17220.1 | 54.245 | 212 | 97 | 0 | 1 | 212 | 1 | 212 | 1.54e-87 | 257 |
| Msa0460980 | AT2G30870.1 | 52.885 | 208 | 97 | 1 | 1 | 208 | 1 | 207 | 2.28e-77 | 231 |
| Msa0460980 | AT2G30860.1 | 51.691 | 207 | 99 | 1 | 1 | 207 | 1 | 206 | 6.11e-74 | 223 |
| Msa0460980 | AT3G62760.1 | 44.286 | 210 | 115 | 2 | 1 | 209 | 1 | 209 | 1.05e-58 | 184 |
| Msa0460980 | AT1G02930.2 | 43.689 | 206 | 114 | 2 | 3 | 208 | 4 | 207 | 1.36e-56 | 178 |
| Msa0460980 | AT1G02930.1 | 43.689 | 206 | 114 | 2 | 3 | 208 | 4 | 207 | 1.36e-56 | 178 |
| Msa0460980 | AT1G02920.1 | 44.175 | 206 | 114 | 1 | 3 | 208 | 4 | 208 | 3.59e-56 | 177 |
| Msa0460980 | AT2G47730.2 | 43.750 | 208 | 115 | 2 | 5 | 211 | 54 | 260 | 2.69e-54 | 174 |
| Msa0460980 | AT2G47730.1 | 43.750 | 208 | 115 | 2 | 5 | 211 | 54 | 260 | 2.69e-54 | 174 |
| Msa0460980 | AT4G02520.1 | 41.905 | 210 | 118 | 2 | 3 | 209 | 4 | 212 | 1.73e-53 | 171 |
| Msa0460980 | AT2G02930.1 | 42.105 | 209 | 117 | 2 | 3 | 208 | 4 | 211 | 3.05e-52 | 167 |
| Msa0460980 | AT1G49860.1 | 45.026 | 191 | 102 | 2 | 20 | 207 | 22 | 212 | 2.22e-51 | 167 |
| Msa0460980 | AT1G02950.2 | 43.137 | 204 | 114 | 2 | 4 | 206 | 28 | 230 | 9.10e-51 | 165 |
| Msa0460980 | AT1G02950.5 | 43.137 | 204 | 114 | 2 | 4 | 206 | 38 | 240 | 1.05e-50 | 165 |
| Msa0460980 | AT1G02950.3 | 43.137 | 204 | 114 | 2 | 4 | 206 | 26 | 228 | 1.07e-50 | 164 |
| Msa0460980 | AT1G02950.1 | 43.137 | 204 | 114 | 2 | 4 | 206 | 26 | 228 | 1.07e-50 | 164 |
| Msa0460980 | AT2G30860.2 | 50.968 | 155 | 75 | 1 | 1 | 155 | 1 | 154 | 2.62e-50 | 161 |
| Msa0460980 | AT1G02940.4 | 39.512 | 205 | 122 | 2 | 4 | 207 | 40 | 243 | 6.23e-49 | 160 |
| Msa0460980 | AT1G02940.1 | 39.512 | 205 | 122 | 2 | 4 | 207 | 40 | 243 | 6.23e-49 | 160 |
| Msa0460980 | AT1G02940.3 | 39.512 | 205 | 122 | 2 | 4 | 207 | 53 | 256 | 7.58e-49 | 160 |
| Msa0460980 | AT1G02940.2 | 39.512 | 205 | 122 | 2 | 4 | 207 | 65 | 268 | 9.01e-49 | 161 |
| Msa0460980 | AT1G02950.4 | 40.972 | 144 | 83 | 2 | 64 | 206 | 60 | 202 | 1.10e-29 | 110 |
| Msa0460980 | AT5G41240.1 | 30.000 | 210 | 138 | 4 | 1 | 204 | 1 | 207 | 4.81e-16 | 76.6 |
| Msa0460980 | AT5G41220.1 | 28.571 | 203 | 138 | 3 | 1 | 197 | 1 | 202 | 2.37e-14 | 71.6 |
| Msa0460980 | AT1G77290.3 | 24.051 | 237 | 148 | 6 | 3 | 208 | 1 | 236 | 3.42e-14 | 69.7 |
| Msa0460980 | AT1G77290.1 | 24.051 | 237 | 148 | 6 | 3 | 208 | 1 | 236 | 3.42e-14 | 69.7 |
| Msa0460980 | AT1G77290.2 | 24.051 | 237 | 148 | 6 | 3 | 208 | 1 | 236 | 3.42e-14 | 69.7 |
| Msa0460980 | AT5G41210.1 | 28.079 | 203 | 139 | 3 | 1 | 197 | 2 | 203 | 1.25e-13 | 68.2 |
| Msa0460980 | AT1G09640.2 | 28.796 | 191 | 123 | 4 | 27 | 211 | 22 | 205 | 1.29e-13 | 68.2 |
| Msa0460980 | AT1G57720.1 | 27.907 | 172 | 112 | 4 | 40 | 208 | 40 | 202 | 8.47e-13 | 67.0 |
| Msa0460980 | AT1G57720.2 | 27.907 | 172 | 112 | 4 | 40 | 208 | 40 | 202 | 8.47e-13 | 67.0 |
| Msa0460980 | AT1G09640.1 | 28.191 | 188 | 122 | 4 | 27 | 208 | 22 | 202 | 2.92e-12 | 65.5 |
Find 50 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTATTGAGGCAGCAAAAT+TGG | 0.165753 | 3_3:+58676846 | Msa0460980:CDS |
| AATATGGTGGTGAAAGTTTA+TGG | 0.187933 | 3_3:+58674865 | Msa0460980:exon |
| GATGGTGATTTCAGACTCTT+TGG | 0.307785 | 3_3:+58675751 | Msa0460980:CDS |
| GTGCATATTGATCTTGATAA+AGG | 0.322979 | 3_3:+58674958 | Msa0460980:CDS |
| GCTGATCTTAGCCATCTTCC+TGG | 0.323812 | 3_3:+58676814 | Msa0460980:CDS |
| ACAAAAGAGCAAGGGAAATA+TGG | 0.331852 | 3_3:+58674849 | Msa0460980:exon |
| TCTAAAAGCACTTATCTTGC+TGG | 0.332817 | 3_3:+58676775 | Msa0460980:CDS |
| AACATTATATTGAAGCATAA+AGG | 0.362361 | 3_3:-58676646 | None:intergenic |
| TTGGAAGAAGTTGAAGGAAT+TGG | 0.377135 | 3_3:+58676933 | Msa0460980:CDS |
| AAATCACCATCCTCTACAAC+TGG | 0.411376 | 3_3:-58675739 | None:intergenic |
| TCAATAAGATGTTCAATTCC+AGG | 0.412097 | 3_3:-58676832 | None:intergenic |
| CTTATTGAGGCAGCAAAATT+GGG | 0.415280 | 3_3:+58676847 | Msa0460980:CDS |
| TTGTGATTTGTGTAGAATCA+AGG | 0.420564 | 3_3:+58676503 | Msa0460980:intron |
| TCCTTCAACTTCTTCCAAGC+TGG | 0.444171 | 3_3:-58676928 | None:intergenic |
| AAAGTTGTGCCAAGTAAGTC+AGG | 0.462656 | 3_3:-58676568 | None:intergenic |
| ACCTGAGTTCCTTCTCCTCC+AGG | 0.473534 | 3_3:+58674993 | Msa0460980:CDS |
| AAATTTCTAGTAGGCCAGCT+TGG | 0.510403 | 3_3:+58676914 | Msa0460980:CDS |
| TGCTGGTGATAAGTTCACTT+TGG | 0.510705 | 3_3:+58676792 | Msa0460980:CDS |
| GGTGGGAGAAAATTTCTAGT+AGG | 0.512715 | 3_3:+58676905 | Msa0460980:CDS |
| TAGAATCAAGGGCTATTGTA+AGG | 0.513820 | 3_3:+58676515 | Msa0460980:intron |
| AAGTTGAAGGAATTGGCATA+AGG | 0.515297 | 3_3:+58676940 | Msa0460980:CDS |
| GATGTTCAATTCCAGGAAGA+TGG | 0.515702 | 3_3:-58676825 | None:intergenic |
| TGGAATTGAACATCTTATTG+AGG | 0.518417 | 3_3:+58676834 | Msa0460980:CDS |
| GACCGTGGTCCTGACTTACT+TGG | 0.519069 | 3_3:+58676559 | Msa0460980:CDS |
| TGTGATTTGTGTAGAATCAA+GGG | 0.531371 | 3_3:+58676504 | Msa0460980:intron |
| AGAAAGCTGTGGTAAATCAA+TGG | 0.531665 | 3_3:+58676596 | Msa0460980:CDS |
| TTTCAAGTAACAAAAGAGCA+AGG | 0.532984 | 3_3:+58674840 | Msa0460980:five_prime_UTR |
| ACAACTGGAACTTGACCAAA+GGG | 0.534533 | 3_3:-58675724 | None:intergenic |
| TATATACTACCTGGAGGAGA+AGG | 0.540663 | 3_3:-58675002 | None:intergenic |
| TGGTCAAGTTCCAGTTGTAG+AGG | 0.543144 | 3_3:+58675729 | Msa0460980:CDS |
| TGAGCTATAGTTATGTCTCC+AGG | 0.558174 | 3_3:-58676700 | None:intergenic |
| CAAGTTCCAGTTGTAGAGGA+TGG | 0.575857 | 3_3:+58675733 | Msa0460980:CDS |
| GCCAGCTTGGAAGAAGTTGA+AGG | 0.576600 | 3_3:+58676927 | Msa0460980:CDS |
| AGAGGAAGAATGTGAATGCT+TGG | 0.577760 | 3_3:+58676884 | Msa0460980:CDS |
| TTCAAGTAACAAAAGAGCAA+GGG | 0.583755 | 3_3:+58674841 | Msa0460980:five_prime_UTR |
| GAAGAATGTGAATGCTTGGT+GGG | 0.598085 | 3_3:+58676888 | Msa0460980:CDS |
| GGAAGAATGTGAATGCTTGG+TGG | 0.600496 | 3_3:+58676887 | Msa0460980:CDS |
| TAGTTCTGAACAGAAGCTAG+AGG | 0.602484 | 3_3:+58676723 | Msa0460980:CDS |
| TACAACTGGAACTTGACCAA+AGG | 0.607365 | 3_3:-58675725 | None:intergenic |
| TGGGACATTTGATTAGTGAG+AGG | 0.608261 | 3_3:+58676866 | Msa0460980:CDS |
| TAATGCAGCATGTCCTCAGA+GGG | 0.631190 | 3_3:+58674894 | Msa0460980:CDS |
| ACCTGGAGGAGAAGGAACTC+AGG | 0.631815 | 3_3:-58674994 | None:intergenic |
| AGCATGTCCTCAGAGGGTGA+TGG | 0.631871 | 3_3:+58674900 | Msa0460980:CDS |
| AGGCAAGCCATCACCCTCTG+AGG | 0.647961 | 3_3:-58674907 | None:intergenic |
| AAAGAGCAAGGGAAATATGG+TGG | 0.665709 | 3_3:+58674852 | Msa0460980:exon |
| TTAATGCAGCATGTCCTCAG+AGG | 0.685889 | 3_3:+58674893 | Msa0460980:CDS |
| AACTTTAGAAGAGAAAGCTG+TGG | 0.694994 | 3_3:+58676585 | Msa0460980:CDS |
| GCAGCAAAGTATGCAGACCG+TGG | 0.721309 | 3_3:+58676544 | Msa0460980:CDS |
| TGCCAAGTAAGTCAGGACCA+CGG | 0.737821 | 3_3:-58676561 | None:intergenic |
| TGCTTGATGTGTATGAACGT+AGG | 0.749850 | 3_3:+58676749 | Msa0460980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTATAAAAGTATG+CGG | + | chr3_3:58675203-58675222 | Msa0460980:intron | 10.0% |
| !! | ATCATATATATAATTGTATA+TGG | - | chr3_3:58675502-58675521 | None:intergenic | 10.0% |
| !!! | AGCAAATTTATTATTTTTTA+GGG | - | chr3_3:58675864-58675883 | None:intergenic | 10.0% |
| !!! | TAGCAAATTTATTATTTTTT+AGG | - | chr3_3:58675865-58675884 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTATAAAAGTATG+CGG | + | chr3_3:58675203-58675222 | Msa0460980:intron | 10.0% |
| !! | ATCATATATATAATTGTATA+TGG | - | chr3_3:58675502-58675521 | None:intergenic | 10.0% |
| !!! | AGCAAATTTATTATTTTTTA+GGG | - | chr3_3:58675864-58675883 | None:intergenic | 10.0% |
| !!! | TAGCAAATTTATTATTTTTT+AGG | - | chr3_3:58675865-58675884 | None:intergenic | 10.0% |
| !!! | AAAATATAGTTGAGATATTT+TGG | + | chr3_3:58675127-58675146 | Msa0460980:intron | 15.0% |
| !!! | CTTTTTTTTCTTCTTAAAAA+AGG | + | chr3_3:58675175-58675194 | Msa0460980:intron | 15.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | + | chr3_3:58675262-58675281 | Msa0460980:intron | 15.0% |
| !!! | AGATTTATTATATTGATTGA+TGG | + | chr3_3:58675305-58675324 | Msa0460980:intron | 15.0% |
| !! | TTGAAGGTAAAAAATAATTA+AGG | - | chr3_3:58675914-58675933 | None:intergenic | 15.0% |
| !!! | AAATTTAAATAGTATCGATT+AGG | - | chr3_3:58676028-58676047 | None:intergenic | 15.0% |
| !!! | AAAATATAGTTGAGATATTT+TGG | + | chr3_3:58675127-58675146 | Msa0460980:intron | 15.0% |
| !!! | CTTTTTTTTCTTCTTAAAAA+AGG | + | chr3_3:58675175-58675194 | Msa0460980:intron | 15.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | + | chr3_3:58675262-58675281 | Msa0460980:intron | 15.0% |
| !!! | AGATTTATTATATTGATTGA+TGG | + | chr3_3:58675305-58675324 | Msa0460980:intron | 15.0% |
| !! | TTGAAGGTAAAAAATAATTA+AGG | - | chr3_3:58675914-58675933 | None:intergenic | 15.0% |
| !!! | AAATTTAAATAGTATCGATT+AGG | - | chr3_3:58676028-58676047 | None:intergenic | 15.0% |
| !! | TTTATAAACTATATACTACC+TGG | - | chr3_3:58675014-58675033 | None:intergenic | 20.0% |
| !!! | GAAAAATACAAAAGTATCTA+GGG | - | chr3_3:58675045-58675064 | None:intergenic | 20.0% |
| !!! | AGAAAAATACAAAAGTATCT+AGG | - | chr3_3:58675046-58675065 | None:intergenic | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | + | chr3_3:58675261-58675280 | Msa0460980:intron | 20.0% |
| !!! | TTTAATTTTCATGGTTTCAT+TGG | + | chr3_3:58676274-58676293 | Msa0460980:intron | 20.0% |
| !! | ACATTGCTCATATTTAAATA+AGG | + | chr3_3:58676390-58676409 | Msa0460980:intron | 20.0% |
| !!! | AGTAACATGTTATTTTTTCT+AGG | + | chr3_3:58676444-58676463 | Msa0460980:intron | 20.0% |
| !!! | GTAACATGTTATTTTTTCTA+GGG | + | chr3_3:58676445-58676464 | Msa0460980:intron | 20.0% |
| !! | ATAAAGTAACATGTTATGTT+AGG | + | chr3_3:58676472-58676491 | Msa0460980:intron | 20.0% |
| !! | AACATTATATTGAAGCATAA+AGG | - | chr3_3:58676649-58676668 | None:intergenic | 20.0% |
| !! | TTTATAAACTATATACTACC+TGG | - | chr3_3:58675014-58675033 | None:intergenic | 20.0% |
| !!! | GAAAAATACAAAAGTATCTA+GGG | - | chr3_3:58675045-58675064 | None:intergenic | 20.0% |
| !!! | AGAAAAATACAAAAGTATCT+AGG | - | chr3_3:58675046-58675065 | None:intergenic | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | + | chr3_3:58675261-58675280 | Msa0460980:intron | 20.0% |
| !!! | TTTAATTTTCATGGTTTCAT+TGG | + | chr3_3:58676274-58676293 | Msa0460980:intron | 20.0% |
| !! | ACATTGCTCATATTTAAATA+AGG | + | chr3_3:58676390-58676409 | Msa0460980:intron | 20.0% |
| !!! | AGTAACATGTTATTTTTTCT+AGG | + | chr3_3:58676444-58676463 | Msa0460980:intron | 20.0% |
| !!! | GTAACATGTTATTTTTTCTA+GGG | + | chr3_3:58676445-58676464 | Msa0460980:intron | 20.0% |
| !! | ATAAAGTAACATGTTATGTT+AGG | + | chr3_3:58676472-58676491 | Msa0460980:intron | 20.0% |
| !! | AACATTATATTGAAGCATAA+AGG | - | chr3_3:58676649-58676668 | None:intergenic | 20.0% |
| !!! | TTGAGATATTTTGGTTTGTT+GGG | + | chr3_3:58675136-58675155 | Msa0460980:intron | 25.0% |
| ! | GCACAAATATTTACTATGTT+CGG | - | chr3_3:58675429-58675448 | None:intergenic | 25.0% |
| ! | TATTGGTGGAATATAATTGA+AGG | - | chr3_3:58675930-58675949 | None:intergenic | 25.0% |
| !!! | AATATGTGGTGTTGATTTAT+TGG | - | chr3_3:58675947-58675966 | None:intergenic | 25.0% |
| !! | TCTCTCTTTGTTTAAATATG+TGG | - | chr3_3:58675961-58675980 | None:intergenic | 25.0% |
| !!! | TAAATAGTATCGATTAGGTA+CGG | - | chr3_3:58676023-58676042 | None:intergenic | 25.0% |
| !!! | CGTTAGTAGTTTAATTTTCA+TGG | + | chr3_3:58676265-58676284 | Msa0460980:intron | 25.0% |
| ! | TAATTCATGTGTATCCATAT+TGG | + | chr3_3:58676308-58676327 | Msa0460980:intron | 25.0% |
| ! | TCTTGTAATTCTACCAAAAA+TGG | + | chr3_3:58676672-58676691 | Msa0460980:CDS | 25.0% |
| ! | CTTGTAATTCTACCAAAAAT+GGG | + | chr3_3:58676673-58676692 | Msa0460980:CDS | 25.0% |
| !!! | TTGAGATATTTTGGTTTGTT+GGG | + | chr3_3:58675136-58675155 | Msa0460980:intron | 25.0% |
| ! | GCACAAATATTTACTATGTT+CGG | - | chr3_3:58675429-58675448 | None:intergenic | 25.0% |
| ! | TATTGGTGGAATATAATTGA+AGG | - | chr3_3:58675930-58675949 | None:intergenic | 25.0% |
| !!! | AATATGTGGTGTTGATTTAT+TGG | - | chr3_3:58675947-58675966 | None:intergenic | 25.0% |
| !! | TCTCTCTTTGTTTAAATATG+TGG | - | chr3_3:58675961-58675980 | None:intergenic | 25.0% |
| !!! | TAAATAGTATCGATTAGGTA+CGG | - | chr3_3:58676023-58676042 | None:intergenic | 25.0% |
| !!! | CGTTAGTAGTTTAATTTTCA+TGG | + | chr3_3:58676265-58676284 | Msa0460980:intron | 25.0% |
| ! | TAATTCATGTGTATCCATAT+TGG | + | chr3_3:58676308-58676327 | Msa0460980:intron | 25.0% |
| ! | TCTTGTAATTCTACCAAAAA+TGG | + | chr3_3:58676672-58676691 | Msa0460980:CDS | 25.0% |
| ! | CTTGTAATTCTACCAAAAAT+GGG | + | chr3_3:58676673-58676692 | Msa0460980:CDS | 25.0% |
| ! | TTTCAAGTAACAAAAGAGCA+AGG | + | chr3_3:58674840-58674859 | Msa0460980:five_prime_UTR | 30.0% |
| TTCAAGTAACAAAAGAGCAA+GGG | + | chr3_3:58674841-58674860 | Msa0460980:five_prime_UTR | 30.0% | |
| ! | AATATGGTGGTGAAAGTTTA+TGG | + | chr3_3:58674865-58674884 | Msa0460980:exon | 30.0% |
| ! | ATTCTACCTCTTTTTCTAAG+AGG | - | chr3_3:58674930-58674949 | None:intergenic | 30.0% |
| GTGCATATTGATCTTGATAA+AGG | + | chr3_3:58674958-58674977 | Msa0460980:CDS | 30.0% | |
| ATAAACTATATACTACCTGG+AGG | - | chr3_3:58675011-58675030 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTCGTAAATGAT+AGG | + | chr3_3:58675088-58675107 | Msa0460980:intron | 30.0% |
| !!! | GTTGAGATATTTTGGTTTGT+TGG | + | chr3_3:58675135-58675154 | Msa0460980:intron | 30.0% |
| TGAAGAGAAATGAGTAATTG+TGG | + | chr3_3:58675389-58675408 | Msa0460980:intron | 30.0% | |
| !!! | TTTTTATTTTTGCAGCCCTT+TGG | + | chr3_3:58675709-58675728 | Msa0460980:intron | 30.0% |
| TGAGCACAAATTTAATTGAG+AGG | - | chr3_3:58675816-58675835 | None:intergenic | 30.0% | |
| !! | AAATAGTATCGATTAGGTAC+GGG | - | chr3_3:58676022-58676041 | None:intergenic | 30.0% |
| AATAGACATTACGTCATGTT+AGG | + | chr3_3:58676134-58676153 | Msa0460980:intron | 30.0% | |
| !! | GTCATGTTAGGCTTTTAAAA+TGG | + | chr3_3:58676146-58676165 | Msa0460980:intron | 30.0% |
| ! | TTGTGATTTGTGTAGAATCA+AGG | + | chr3_3:58676503-58676522 | Msa0460980:intron | 30.0% |
| ! | TGTGATTTGTGTAGAATCAA+GGG | + | chr3_3:58676504-58676523 | Msa0460980:intron | 30.0% |
| TCAATAAGATGTTCAATTCC+AGG | - | chr3_3:58676835-58676854 | None:intergenic | 30.0% | |
| TGGAATTGAACATCTTATTG+AGG | + | chr3_3:58676834-58676853 | Msa0460980:CDS | 30.0% | |
| ! | TTTCAAGTAACAAAAGAGCA+AGG | + | chr3_3:58674840-58674859 | Msa0460980:five_prime_UTR | 30.0% |
| TTCAAGTAACAAAAGAGCAA+GGG | + | chr3_3:58674841-58674860 | Msa0460980:five_prime_UTR | 30.0% | |
| ! | AATATGGTGGTGAAAGTTTA+TGG | + | chr3_3:58674865-58674884 | Msa0460980:exon | 30.0% |
| ! | ATTCTACCTCTTTTTCTAAG+AGG | - | chr3_3:58674930-58674949 | None:intergenic | 30.0% |
| GTGCATATTGATCTTGATAA+AGG | + | chr3_3:58674958-58674977 | Msa0460980:CDS | 30.0% | |
| ATAAACTATATACTACCTGG+AGG | - | chr3_3:58675011-58675030 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTCGTAAATGAT+AGG | + | chr3_3:58675088-58675107 | Msa0460980:intron | 30.0% |
| !!! | GTTGAGATATTTTGGTTTGT+TGG | + | chr3_3:58675135-58675154 | Msa0460980:intron | 30.0% |
| TGAAGAGAAATGAGTAATTG+TGG | + | chr3_3:58675389-58675408 | Msa0460980:intron | 30.0% | |
| !!! | TTTTTATTTTTGCAGCCCTT+TGG | + | chr3_3:58675709-58675728 | Msa0460980:intron | 30.0% |
| TGAGCACAAATTTAATTGAG+AGG | - | chr3_3:58675816-58675835 | None:intergenic | 30.0% | |
| !! | AAATAGTATCGATTAGGTAC+GGG | - | chr3_3:58676022-58676041 | None:intergenic | 30.0% |
| AATAGACATTACGTCATGTT+AGG | + | chr3_3:58676134-58676153 | Msa0460980:intron | 30.0% | |
| !! | GTCATGTTAGGCTTTTAAAA+TGG | + | chr3_3:58676146-58676165 | Msa0460980:intron | 30.0% |
| ! | TTGTGATTTGTGTAGAATCA+AGG | + | chr3_3:58676503-58676522 | Msa0460980:intron | 30.0% |
| ! | TGTGATTTGTGTAGAATCAA+GGG | + | chr3_3:58676504-58676523 | Msa0460980:intron | 30.0% |
| TCAATAAGATGTTCAATTCC+AGG | - | chr3_3:58676835-58676854 | None:intergenic | 30.0% | |
| TGGAATTGAACATCTTATTG+AGG | + | chr3_3:58676834-58676853 | Msa0460980:CDS | 30.0% | |
| ACAAAAGAGCAAGGGAAATA+TGG | + | chr3_3:58674849-58674868 | Msa0460980:exon | 35.0% | |
| !!! | AGATATTTTGGTTTGTTGGG+TGG | + | chr3_3:58675139-58675158 | Msa0460980:intron | 35.0% |
| CATTTCTCTTCACTTAGTGT+AGG | - | chr3_3:58675381-58675400 | None:intergenic | 35.0% | |
| ACATTCTCATGAAATACGAG+TGG | - | chr3_3:58675661-58675680 | None:intergenic | 35.0% | |
| ACTCTTTGGTGAGAATTTGT+TGG | + | chr3_3:58675765-58675784 | Msa0460980:intron | 35.0% | |
| !! | ATGTGGTGTTGATTTATTGG+TGG | - | chr3_3:58675944-58675963 | None:intergenic | 35.0% |
| ATATTTGCGTGAGCTTTCTA+AGG | - | chr3_3:58676210-58676229 | None:intergenic | 35.0% | |
| AACAGATTAGCAAGCCAATA+TGG | - | chr3_3:58676325-58676344 | None:intergenic | 35.0% | |
| TAGAATCAAGGGCTATTGTA+AGG | + | chr3_3:58676515-58676534 | Msa0460980:intron | 35.0% | |
| ! | AACTTTAGAAGAGAAAGCTG+TGG | + | chr3_3:58676585-58676604 | Msa0460980:CDS | 35.0% |
| AGAAAGCTGTGGTAAATCAA+TGG | + | chr3_3:58676596-58676615 | Msa0460980:CDS | 35.0% | |
| !! | TCTAAAAGCACTTATCTTGC+TGG | + | chr3_3:58676775-58676794 | Msa0460980:CDS | 35.0% |
| TCTTATTGAGGCAGCAAAAT+TGG | + | chr3_3:58676846-58676865 | Msa0460980:CDS | 35.0% | |
| CTTATTGAGGCAGCAAAATT+GGG | + | chr3_3:58676847-58676866 | Msa0460980:CDS | 35.0% | |
| TTGGAAGAAGTTGAAGGAAT+TGG | + | chr3_3:58676933-58676952 | Msa0460980:CDS | 35.0% | |
| AAGTTGAAGGAATTGGCATA+AGG | + | chr3_3:58676940-58676959 | Msa0460980:CDS | 35.0% | |
| AGTTGAAGGAATTGGCATAA+GGG | + | chr3_3:58676941-58676960 | Msa0460980:CDS | 35.0% | |
| ACAAAAGAGCAAGGGAAATA+TGG | + | chr3_3:58674849-58674868 | Msa0460980:exon | 35.0% | |
| !!! | AGATATTTTGGTTTGTTGGG+TGG | + | chr3_3:58675139-58675158 | Msa0460980:intron | 35.0% |
| CATTTCTCTTCACTTAGTGT+AGG | - | chr3_3:58675381-58675400 | None:intergenic | 35.0% | |
| ACATTCTCATGAAATACGAG+TGG | - | chr3_3:58675661-58675680 | None:intergenic | 35.0% | |
| ACTCTTTGGTGAGAATTTGT+TGG | + | chr3_3:58675765-58675784 | Msa0460980:intron | 35.0% | |
| !! | ATGTGGTGTTGATTTATTGG+TGG | - | chr3_3:58675944-58675963 | None:intergenic | 35.0% |
| ATATTTGCGTGAGCTTTCTA+AGG | - | chr3_3:58676210-58676229 | None:intergenic | 35.0% | |
| AACAGATTAGCAAGCCAATA+TGG | - | chr3_3:58676325-58676344 | None:intergenic | 35.0% | |
| TAGAATCAAGGGCTATTGTA+AGG | + | chr3_3:58676515-58676534 | Msa0460980:intron | 35.0% | |
| ! | AACTTTAGAAGAGAAAGCTG+TGG | + | chr3_3:58676585-58676604 | Msa0460980:CDS | 35.0% |
| AGAAAGCTGTGGTAAATCAA+TGG | + | chr3_3:58676596-58676615 | Msa0460980:CDS | 35.0% | |
| !! | TCTAAAAGCACTTATCTTGC+TGG | + | chr3_3:58676775-58676794 | Msa0460980:CDS | 35.0% |
| TCTTATTGAGGCAGCAAAAT+TGG | + | chr3_3:58676846-58676865 | Msa0460980:CDS | 35.0% | |
| CTTATTGAGGCAGCAAAATT+GGG | + | chr3_3:58676847-58676866 | Msa0460980:CDS | 35.0% | |
| TTGGAAGAAGTTGAAGGAAT+TGG | + | chr3_3:58676933-58676952 | Msa0460980:CDS | 35.0% | |
| AAAGAGCAAGGGAAATATGG+TGG | + | chr3_3:58674852-58674871 | Msa0460980:exon | 40.0% | |
| TATATACTACCTGGAGGAGA+AGG | - | chr3_3:58675005-58675024 | None:intergenic | 40.0% | |
| ACAACTGGAACTTGACCAAA+GGG | - | chr3_3:58675727-58675746 | None:intergenic | 40.0% | |
| TACAACTGGAACTTGACCAA+AGG | - | chr3_3:58675728-58675747 | None:intergenic | 40.0% | |
| AAATCACCATCCTCTACAAC+TGG | - | chr3_3:58675742-58675761 | None:intergenic | 40.0% | |
| GATGGTGATTTCAGACTCTT+TGG | + | chr3_3:58675751-58675770 | Msa0460980:CDS | 40.0% | |
| !! | AACAAAGAGAGAGCACCAAT+TGG | + | chr3_3:58675969-58675988 | Msa0460980:intron | 40.0% |
| !! | ACAAAGAGAGAGCACCAATT+GGG | + | chr3_3:58675970-58675989 | Msa0460980:intron | 40.0% |
| AAAGTTGTGCCAAGTAAGTC+AGG | - | chr3_3:58676571-58676590 | None:intergenic | 40.0% | |
| TGAGCTATAGTTATGTCTCC+AGG | - | chr3_3:58676703-58676722 | None:intergenic | 40.0% | |
| !! | TAGTTCTGAACAGAAGCTAG+AGG | + | chr3_3:58676723-58676742 | Msa0460980:CDS | 40.0% |
| TGCTTGATGTGTATGAACGT+AGG | + | chr3_3:58676749-58676768 | Msa0460980:CDS | 40.0% | |
| TGCTGGTGATAAGTTCACTT+TGG | + | chr3_3:58676792-58676811 | Msa0460980:CDS | 40.0% | |
| GATGTTCAATTCCAGGAAGA+TGG | - | chr3_3:58676828-58676847 | None:intergenic | 40.0% | |
| TGGGACATTTGATTAGTGAG+AGG | + | chr3_3:58676866-58676885 | Msa0460980:CDS | 40.0% | |
| AGAGGAAGAATGTGAATGCT+TGG | + | chr3_3:58676884-58676903 | Msa0460980:CDS | 40.0% | |
| GAAGAATGTGAATGCTTGGT+GGG | + | chr3_3:58676888-58676907 | Msa0460980:CDS | 40.0% | |
| !! | GGTGGGAGAAAATTTCTAGT+AGG | + | chr3_3:58676905-58676924 | Msa0460980:CDS | 40.0% |
| !! | AAATTTCTAGTAGGCCAGCT+TGG | + | chr3_3:58676914-58676933 | Msa0460980:CDS | 40.0% |
| AAAGAGCAAGGGAAATATGG+TGG | + | chr3_3:58674852-58674871 | Msa0460980:exon | 40.0% | |
| TATATACTACCTGGAGGAGA+AGG | - | chr3_3:58675005-58675024 | None:intergenic | 40.0% | |
| ACAACTGGAACTTGACCAAA+GGG | - | chr3_3:58675727-58675746 | None:intergenic | 40.0% | |
| TACAACTGGAACTTGACCAA+AGG | - | chr3_3:58675728-58675747 | None:intergenic | 40.0% | |
| AAATCACCATCCTCTACAAC+TGG | - | chr3_3:58675742-58675761 | None:intergenic | 40.0% | |
| GATGGTGATTTCAGACTCTT+TGG | + | chr3_3:58675751-58675770 | Msa0460980:CDS | 40.0% | |
| !! | AACAAAGAGAGAGCACCAAT+TGG | + | chr3_3:58675969-58675988 | Msa0460980:intron | 40.0% |
| !! | ACAAAGAGAGAGCACCAATT+GGG | + | chr3_3:58675970-58675989 | Msa0460980:intron | 40.0% |
| AAAGTTGTGCCAAGTAAGTC+AGG | - | chr3_3:58676571-58676590 | None:intergenic | 40.0% | |
| TGAGCTATAGTTATGTCTCC+AGG | - | chr3_3:58676703-58676722 | None:intergenic | 40.0% | |
| !! | TAGTTCTGAACAGAAGCTAG+AGG | + | chr3_3:58676723-58676742 | Msa0460980:CDS | 40.0% |
| TGCTTGATGTGTATGAACGT+AGG | + | chr3_3:58676749-58676768 | Msa0460980:CDS | 40.0% | |
| TGCTGGTGATAAGTTCACTT+TGG | + | chr3_3:58676792-58676811 | Msa0460980:CDS | 40.0% | |
| GATGTTCAATTCCAGGAAGA+TGG | - | chr3_3:58676828-58676847 | None:intergenic | 40.0% | |
| TGGGACATTTGATTAGTGAG+AGG | + | chr3_3:58676866-58676885 | Msa0460980:CDS | 40.0% | |
| AGAGGAAGAATGTGAATGCT+TGG | + | chr3_3:58676884-58676903 | Msa0460980:CDS | 40.0% | |
| GAAGAATGTGAATGCTTGGT+GGG | + | chr3_3:58676888-58676907 | Msa0460980:CDS | 40.0% | |
| !! | GGTGGGAGAAAATTTCTAGT+AGG | + | chr3_3:58676905-58676924 | Msa0460980:CDS | 40.0% |
| !! | AAATTTCTAGTAGGCCAGCT+TGG | + | chr3_3:58676914-58676933 | Msa0460980:CDS | 40.0% |
| TTAATGCAGCATGTCCTCAG+AGG | + | chr3_3:58674893-58674912 | Msa0460980:CDS | 45.0% | |
| TAATGCAGCATGTCCTCAGA+GGG | + | chr3_3:58674894-58674913 | Msa0460980:CDS | 45.0% | |
| GGCTTGCCTCTTAGAAAAAG+AGG | + | chr3_3:58674921-58674940 | Msa0460980:CDS | 45.0% | |
| TGGTCAAGTTCCAGTTGTAG+AGG | + | chr3_3:58675729-58675748 | Msa0460980:CDS | 45.0% | |
| CAAGTTCCAGTTGTAGAGGA+TGG | + | chr3_3:58675733-58675752 | Msa0460980:CDS | 45.0% | |
| !! | GTATCGATTAGGTACGGGTT+TGG | - | chr3_3:58676017-58676036 | None:intergenic | 45.0% |
| CTACCAAAAATGGGTAAGCC+TGG | + | chr3_3:58676682-58676701 | Msa0460980:CDS | 45.0% | |
| ! | TCTCCAGGCTTACCCATTTT+TGG | - | chr3_3:58676688-58676707 | None:intergenic | 45.0% |
| GGAAGAATGTGAATGCTTGG+TGG | + | chr3_3:58676887-58676906 | Msa0460980:CDS | 45.0% | |
| TCCTTCAACTTCTTCCAAGC+TGG | - | chr3_3:58676931-58676950 | None:intergenic | 45.0% | |
| TTAATGCAGCATGTCCTCAG+AGG | + | chr3_3:58674893-58674912 | Msa0460980:CDS | 45.0% | |
| TAATGCAGCATGTCCTCAGA+GGG | + | chr3_3:58674894-58674913 | Msa0460980:CDS | 45.0% | |
| GGCTTGCCTCTTAGAAAAAG+AGG | + | chr3_3:58674921-58674940 | Msa0460980:CDS | 45.0% | |
| TGGTCAAGTTCCAGTTGTAG+AGG | + | chr3_3:58675729-58675748 | Msa0460980:CDS | 45.0% | |
| CAAGTTCCAGTTGTAGAGGA+TGG | + | chr3_3:58675733-58675752 | Msa0460980:CDS | 45.0% | |
| !! | GTATCGATTAGGTACGGGTT+TGG | - | chr3_3:58676017-58676036 | None:intergenic | 45.0% |
| CTACCAAAAATGGGTAAGCC+TGG | + | chr3_3:58676682-58676701 | Msa0460980:CDS | 45.0% | |
| ! | TCTCCAGGCTTACCCATTTT+TGG | - | chr3_3:58676688-58676707 | None:intergenic | 45.0% |
| GGAAGAATGTGAATGCTTGG+TGG | + | chr3_3:58676887-58676906 | Msa0460980:CDS | 45.0% | |
| TCCTTCAACTTCTTCCAAGC+TGG | - | chr3_3:58676931-58676950 | None:intergenic | 45.0% | |
| !! | AAAAATATTATTGAATAAAA+AGG | - | chr3_3:58675071-58675090 | None:intergenic | 5.0% |
| !! | AAAAATATTATTGAATAAAA+AGG | - | chr3_3:58675071-58675090 | None:intergenic | 5.0% |
| ! | TACGGGTTTGGTATCCCATG+TGG | - | chr3_3:58676005-58676024 | None:intergenic | 50.0% |
| TGCCAAGTAAGTCAGGACCA+CGG | - | chr3_3:58676564-58676583 | None:intergenic | 50.0% | |
| GCTGATCTTAGCCATCTTCC+TGG | + | chr3_3:58676814-58676833 | Msa0460980:CDS | 50.0% | |
| GCCAGCTTGGAAGAAGTTGA+AGG | + | chr3_3:58676927-58676946 | Msa0460980:CDS | 50.0% | |
| ! | TACGGGTTTGGTATCCCATG+TGG | - | chr3_3:58676005-58676024 | None:intergenic | 50.0% |
| TGCCAAGTAAGTCAGGACCA+CGG | - | chr3_3:58676564-58676583 | None:intergenic | 50.0% | |
| GCTGATCTTAGCCATCTTCC+TGG | + | chr3_3:58676814-58676833 | Msa0460980:CDS | 50.0% | |
| GCCAGCTTGGAAGAAGTTGA+AGG | + | chr3_3:58676927-58676946 | Msa0460980:CDS | 50.0% | |
| AGCATGTCCTCAGAGGGTGA+TGG | + | chr3_3:58674900-58674919 | Msa0460980:CDS | 55.0% | |
| ACCTGAGTTCCTTCTCCTCC+AGG | + | chr3_3:58674993-58675012 | Msa0460980:CDS | 55.0% | |
| ACCTGGAGGAGAAGGAACTC+AGG | - | chr3_3:58674997-58675016 | None:intergenic | 55.0% | |
| GAGCACCAATTGGGACGACA+TGG | + | chr3_3:58675979-58675998 | Msa0460980:intron | 55.0% | |
| TGTGGCCATGTCGTCCCAAT+TGG | - | chr3_3:58675987-58676006 | None:intergenic | 55.0% | |
| ATTGGGACGACATGGCCACA+TGG | + | chr3_3:58675987-58676006 | Msa0460980:intron | 55.0% | |
| TTGGGACGACATGGCCACAT+GGG | + | chr3_3:58675988-58676007 | Msa0460980:intron | 55.0% | |
| GCAGCAAAGTATGCAGACCG+TGG | + | chr3_3:58676544-58676563 | Msa0460980:CDS | 55.0% | |
| GACCGTGGTCCTGACTTACT+TGG | + | chr3_3:58676559-58676578 | Msa0460980:CDS | 55.0% | |
| AGCATGTCCTCAGAGGGTGA+TGG | + | chr3_3:58674900-58674919 | Msa0460980:CDS | 55.0% | |
| ACCTGAGTTCCTTCTCCTCC+AGG | + | chr3_3:58674993-58675012 | Msa0460980:CDS | 55.0% | |
| ACCTGGAGGAGAAGGAACTC+AGG | - | chr3_3:58674997-58675016 | None:intergenic | 55.0% | |
| GAGCACCAATTGGGACGACA+TGG | + | chr3_3:58675979-58675998 | Msa0460980:intron | 55.0% | |
| TGTGGCCATGTCGTCCCAAT+TGG | - | chr3_3:58675987-58676006 | None:intergenic | 55.0% | |
| ATTGGGACGACATGGCCACA+TGG | + | chr3_3:58675987-58676006 | Msa0460980:intron | 55.0% | |
| TTGGGACGACATGGCCACAT+GGG | + | chr3_3:58675988-58676007 | Msa0460980:intron | 55.0% | |
| GCAGCAAAGTATGCAGACCG+TGG | + | chr3_3:58676544-58676563 | Msa0460980:CDS | 55.0% | |
| GACCGTGGTCCTGACTTACT+TGG | + | chr3_3:58676559-58676578 | Msa0460980:CDS | 55.0% | |
| AGGCAAGCCATCACCCTCTG+AGG | - | chr3_3:58674910-58674929 | None:intergenic | 60.0% | |
| AGGCAAGCCATCACCCTCTG+AGG | - | chr3_3:58674910-58674929 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 58674835 | 58676960 | 58674835 | ID=Msa0460980;Name=Msa0460980 |
| chr3_3 | mRNA | 58674835 | 58676960 | 58674835 | ID=Msa0460980-mRNA-1;Parent=Msa0460980;Name=Msa0460980-mRNA-1;_AED=0.04;_eAED=0.04;_QI=33|1|0.66|1|1|1|3|0|212 |
| chr3_3 | exon | 58674835 | 58675014 | 58674835 | ID=Msa0460980-mRNA-1:exon:12188;Parent=Msa0460980-mRNA-1 |
| chr3_3 | exon | 58675724 | 58675772 | 58675724 | ID=Msa0460980-mRNA-1:exon:12189;Parent=Msa0460980-mRNA-1 |
| chr3_3 | exon | 58676518 | 58676960 | 58676518 | ID=Msa0460980-mRNA-1:exon:12190;Parent=Msa0460980-mRNA-1 |
| chr3_3 | five_prime_UTR | 58674835 | 58674867 | 58674835 | ID=Msa0460980-mRNA-1:five_prime_utr;Parent=Msa0460980-mRNA-1 |
| chr3_3 | CDS | 58674868 | 58675014 | 58674868 | ID=Msa0460980-mRNA-1:cds;Parent=Msa0460980-mRNA-1 |
| chr3_3 | CDS | 58675724 | 58675772 | 58675724 | ID=Msa0460980-mRNA-1:cds;Parent=Msa0460980-mRNA-1 |
| chr3_3 | CDS | 58676518 | 58676960 | 58676518 | ID=Msa0460980-mRNA-1:cds;Parent=Msa0460980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
