AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0193890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0193890 MtrunA17_Chr2g0284241 99.698 331 1 0 1 331 1 331 0.0 694
Msa0193890 MtrunA17_Chr4g0067151 22.780 259 169 6 77 323 62 301 6.09e-21 91.7
Msa0193890 MtrunA17_Chr4g0067151 24.800 250 166 8 16 257 86 321 4.53e-14 72.0
Msa0193890 MtrunA17_Chr6g0448921 27.778 216 149 6 21 232 72 284 1.85e-20 92.4
Msa0193890 MtrunA17_Chr6g0448921 27.668 253 164 9 41 288 5 243 7.91e-19 87.4
Msa0193890 MtrunA17_Chr1g0185501 23.273 275 191 6 12 282 31 289 1.48e-17 82.0
Msa0193890 MtrunA17_Chr1g0185501 23.793 290 205 7 38 323 15 292 1.09e-16 79.3
Msa0193890 MtrunA17_Chr5g0405851 26.606 218 146 5 86 301 246 451 1.58e-17 83.2
Msa0193890 MtrunA17_Chr4g0059031 23.427 286 191 8 44 314 354 626 2.46e-17 83.2
Msa0193890 MtrunA17_Chr4g0059031 23.373 338 206 12 22 313 116 446 1.32e-11 65.9
Msa0193890 MtrunA17_Chr1g0176241 23.101 316 186 9 41 313 110 411 1.74e-16 80.1
Msa0193890 MtrunA17_Chr1g0200901 25.000 300 180 8 16 299 131 401 7.16e-16 77.8
Msa0193890 MtrunA17_Chr3g0093681 24.028 283 200 6 23 303 287 556 1.76e-15 77.4
Msa0193890 MtrunA17_Chr3g0093681 25.403 248 166 8 84 326 305 538 2.37e-11 64.7
Msa0193890 MtrunA17_Chr2g0281451 27.700 213 139 5 83 293 48 247 3.03e-15 77.0
Msa0193890 MtrunA17_Chr2g0281451 24.658 219 152 7 21 232 71 283 3.60e-12 67.4
Msa0193890 MtrunA17_Chr4g0053651 24.923 325 188 11 22 312 244 546 4.80e-15 75.9
Msa0193890 MtrunA17_Chr1g0172501 25.806 217 149 4 88 303 351 556 8.58e-15 75.1
Msa0193890 MtrunA17_Chr1g0172501 25.806 248 165 8 84 326 305 538 1.47e-11 65.5
Msa0193890 MtrunA17_Chr4g0069701 24.335 263 178 7 70 322 381 632 1.95e-14 74.3
Msa0193890 MtrunA17_Chr4g0069701 19.608 306 234 5 23 322 375 674 1.00e-11 66.2
Msa0193890 MtrunA17_Chr5g0401671 23.988 321 198 10 22 313 261 564 2.11e-14 73.9
Msa0193890 MtrunA17_Chr3g0116561 24.490 294 182 10 23 300 240 509 2.50e-14 73.6
Msa0193890 MtrunA17_Chr7g0253861 24.473 237 159 6 85 314 47 270 6.59e-14 71.6
Msa0193890 MtrunA17_Chr7g0253861 24.648 284 189 9 51 323 56 325 2.14e-13 70.1
Msa0193890 MtrunA17_Chr7g0253861 23.891 293 188 10 22 298 69 342 8.24e-12 65.5
Msa0193890 MtrunA17_Chr8g0392701 24.601 313 183 15 20 299 28 320 1.01e-13 70.9
Msa0193890 MtrunA17_Chr8g0392701 26.697 221 147 6 92 305 14 226 1.99e-11 64.3
Msa0193890 MtrunA17_Chr5g0401661 24.891 229 155 6 92 313 436 654 1.36e-13 71.6
Msa0193890 MtrunA17_Chr4g0058091 23.693 287 193 8 23 300 245 514 8.23e-13 68.9
Msa0193890 MtrunA17_Chr3g0099061 24.903 257 163 9 16 258 272 512 8.52e-13 68.9
Msa0193890 MtrunA17_Chr4g0070791 24.590 305 165 10 22 313 32 284 4.33e-12 66.2
Msa0193890 MtrunA17_Chr8g0352821 25.773 194 122 7 132 320 181 357 5.91e-12 66.6
Msa0193890 MtrunA17_Chr3g0136971 22.848 302 187 11 16 307 357 622 5.91e-12 66.6
Msa0193890 MtrunA17_Chr2g0331961 24.153 236 164 7 92 323 16 240 8.01e-12 65.1
Msa0193890 MtrunA17_Chr6g0474101 25.514 243 150 10 90 324 147 366 1.62e-11 65.1
Msa0193890 MtrunA17_Chr8g0390861 26.316 228 140 6 99 319 875 1081 2.87e-11 64.7
Msa0193890 MtrunA17_Chr7g0260021 24.545 220 140 6 56 259 22 231 5.20e-11 63.2
Msa0193890 MtrunA17_Chr8g0383711 22.680 291 205 9 15 301 25 299 8.63e-11 62.0
Msa0193890 MtrunA17_Chr8g0388841 23.348 227 160 8 84 306 363 579 8.94e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0193890 AT3G18140.1 85.761 309 40 1 16 324 1 305 0.0 565
Msa0193890 AT2G22040.1 69.967 303 87 2 21 322 11 310 6.20e-156 439
Msa0193890 AT3G18140.2 90.498 221 21 0 16 236 1 221 5.69e-153 428
Msa0193890 AT3G49660.1 22.951 305 182 10 44 323 18 294 1.06e-24 102
Msa0193890 AT4G02730.1 23.875 289 201 8 41 323 34 309 5.34e-19 86.7
Msa0193890 AT4G02730.1 24.415 299 199 9 12 299 47 329 7.48e-18 83.6
Msa0193890 AT2G41500.1 25.874 286 154 8 23 306 313 542 3.04e-18 85.9
Msa0193890 AT2G41500.1 34.043 141 79 5 188 326 266 394 3.82e-12 67.4
Msa0193890 AT2G41500.2 25.874 286 154 8 23 306 313 542 3.04e-18 85.9
Msa0193890 AT2G41500.2 34.043 141 79 5 188 326 266 394 3.82e-12 67.4
Msa0193890 AT5G16750.1 25.524 286 185 8 44 314 353 625 3.01e-17 83.2
Msa0193890 AT5G25150.2 28.111 217 138 7 16 227 426 629 9.60e-17 81.6
Msa0193890 AT1G11160.4 30.144 209 131 5 87 293 52 247 9.83e-17 81.6
Msa0193890 AT1G11160.4 25.134 187 134 5 21 204 71 254 1.91e-13 71.6
Msa0193890 AT1G11160.2 30.144 209 131 5 87 293 52 247 1.01e-16 81.6
Msa0193890 AT1G11160.2 25.134 187 134 5 21 204 71 254 1.97e-13 71.6
Msa0193890 AT1G11160.1 30.144 209 131 5 87 293 52 247 1.04e-16 81.6
Msa0193890 AT1G11160.1 25.134 187 134 5 21 204 71 254 1.90e-13 71.6
Msa0193890 AT5G25150.1 28.358 201 133 6 16 211 426 620 1.17e-16 81.3
Msa0193890 AT1G61210.3 28.505 214 138 5 83 294 48 248 1.27e-16 81.3
Msa0193890 AT1G61210.3 24.599 187 135 5 21 204 71 254 1.48e-13 72.0
Msa0193890 AT1G61210.2 28.505 214 138 5 83 294 48 248 2.08e-16 80.9
Msa0193890 AT1G61210.2 24.599 187 135 5 21 204 71 254 3.13e-13 71.2
Msa0193890 AT1G61210.1 28.505 214 138 5 83 294 48 248 2.12e-16 80.9
Msa0193890 AT1G61210.1 24.599 187 135 5 21 204 71 254 3.16e-13 71.2
Msa0193890 AT1G11160.3 29.756 205 129 5 91 293 14 205 3.47e-16 80.1
Msa0193890 AT1G11160.3 25.134 187 134 5 21 204 29 212 1.70e-13 72.0
Msa0193890 AT5G23430.3 25.463 216 154 6 21 232 72 284 6.20e-16 79.3
Msa0193890 AT5G23430.3 28.696 230 143 11 41 264 5 219 4.95e-14 73.6
Msa0193890 AT5G23430.2 25.463 216 154 6 21 232 72 284 6.20e-16 79.3
Msa0193890 AT5G23430.2 28.696 230 143 11 41 264 5 219 4.95e-14 73.6
Msa0193890 AT5G23430.1 25.463 216 154 6 21 232 72 284 6.86e-16 79.0
Msa0193890 AT5G23430.1 28.696 230 143 11 41 264 5 219 5.43e-14 73.6
Msa0193890 AT5G08390.1 25.688 218 149 7 22 232 73 284 8.71e-16 79.0
Msa0193890 AT5G08390.1 27.165 254 164 10 41 288 5 243 9.55e-16 78.6
Msa0193890 AT1G18080.1 23.226 310 189 12 22 299 30 322 4.84e-14 72.4
Msa0193890 AT1G18080.1 27.350 234 154 8 92 318 14 238 2.49e-12 67.4
Msa0193890 AT2G43770.1 25.506 247 161 7 87 323 90 323 5.95e-14 72.0
Msa0193890 AT2G43770.1 24.055 291 206 9 14 298 59 340 8.73e-14 71.6
Msa0193890 AT2G43770.1 23.109 238 161 8 85 314 45 268 7.64e-12 65.9
Msa0193890 AT3G18130.1 22.330 309 192 12 22 299 30 321 1.84e-13 70.5
Msa0193890 AT5G67320.1 22.462 325 208 10 17 313 274 582 3.99e-13 70.5
Msa0193890 AT4G29830.1 26.693 251 160 8 86 322 53 293 1.26e-12 68.2
Msa0193890 AT4G29830.1 23.548 310 200 10 18 310 29 318 2.94e-11 63.9
Msa0193890 AT5G53500.2 20.183 327 215 9 14 308 227 539 2.04e-12 68.6
Msa0193890 AT5G53500.1 20.183 327 215 9 14 308 227 539 2.04e-12 68.6
Msa0193890 AT1G48630.1 22.436 312 188 13 22 299 30 321 5.26e-12 66.2
Msa0193890 AT5G64730.1 23.322 283 189 10 25 299 35 297 6.46e-12 65.9
Msa0193890 AT1G49040.1 28.986 207 131 5 99 304 861 1052 7.79e-12 67.0
Msa0193890 AT1G49040.1 21.577 241 173 4 64 304 870 1094 3.67e-11 64.7
Msa0193890 AT5G51980.1 25.000 248 154 10 90 328 148 372 1.06e-11 65.9
Msa0193890 AT5G51980.2 25.000 248 154 10 90 328 148 372 1.06e-11 65.9
Msa0193890 AT4G25440.2 25.000 248 154 11 90 328 141 365 2.34e-11 64.7
Msa0193890 AT4G25440.3 25.000 248 154 11 90 328 141 365 2.34e-11 64.7
Msa0193890 AT4G25440.1 25.000 248 154 11 90 328 141 365 2.34e-11 64.7
Msa0193890 AT3G15980.1 23.830 235 164 6 93 323 15 238 7.19e-11 63.9
Msa0193890 AT3G15980.7 25.000 236 160 7 93 323 15 238 7.20e-11 63.9
Msa0193890 AT3G15980.5 23.830 235 164 6 93 323 15 238 8.13e-11 63.5
Msa0193890 AT5G50230.1 22.183 284 201 8 23 300 240 509 8.22e-11 63.2
Msa0193890 AT3G15980.3 25.000 236 160 7 93 323 15 238 8.33e-11 63.5
Msa0193890 AT3G15980.6 25.000 236 160 7 93 323 15 238 8.33e-11 63.5
Msa0193890 AT3G15980.2 25.000 236 160 7 93 323 15 238 8.33e-11 63.5
Msa0193890 AT3G15980.4 25.000 236 160 7 93 323 15 238 8.33e-11 63.5

Find 159 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATCACACCATTCGATTT+TGG 0.123001 2_1:-9746812 Msa0193890:CDS
TAGTGAAACTTAACCTGATT+TGG 0.233887 2_1:+9745364 None:intergenic
TTATGTAAACAGCAACTTTC+AGG 0.235009 2_1:+9737881 Msa0193880:intron
TGCCATGCTTCTCAGCCTTA+TGG 0.243820 2_1:-9738001 Msa0193890:three_prime_UTR
CCGCCGGTGGCGACGGTGTC+TGG 0.277283 2_1:+9747105 None:intergenic
AAATGCAATCTACACCGTTT+TGG 0.279803 2_1:+9738141 None:intergenic
TTAATCAGAATGTTCACTTT+TGG 0.281937 2_1:-9738063 Msa0193890:three_prime_UTR
GACAACTGGTGAAGATATTA+AGG 0.291016 2_1:-9738734 Msa0193890:CDS
AAGAGGAAGATTCGTGGTTT+AGG 0.306826 2_1:-9746872 Msa0193890:CDS
CCCAACTGCCATTACATTAC+TGG 0.320304 2_1:+9745615 None:intergenic
CTAATATCTGGTGATCAAAA+TGG 0.327450 2_1:-9745014 Msa0193890:CDS
ATTATCTAGTACCTGTAATA+AGG 0.327568 2_1:+9739712 None:intergenic
CTAAGAGTGGTCGCTGTTAC+CGG 0.330181 2_1:-9746785 Msa0193890:CDS
ACACTAGAGAAGACTTTGAT+AGG 0.342874 2_1:-9739882 Msa0193890:intron
CATGTGTTGCATTTCAAAAC+TGG 0.346374 2_1:+9738421 None:intergenic
TTATACACCCCATCATATAT+AGG 0.348283 2_1:-9738114 Msa0193890:three_prime_UTR
ACATAAGTGCTCAATGCTTC+AGG 0.349738 2_1:-9737864 Msa0193890:three_prime_UTR
CTTGCTCTTCACTTGTTTGT+GGG 0.361285 2_1:+9738256 None:intergenic
GTAGTAGCAGCAAATAATAA+TGG 0.372307 2_1:-9744446 Msa0193890:CDS
AAACGGAATCAAACCGAATC+AGG 0.380444 2_1:+9746750 None:intergenic
CTGATCATACTGTTAAGATA+TGG 0.381071 2_1:-9739920 Msa0193890:CDS
AGTGAAACTTAACCTGATTT+GGG 0.381247 2_1:+9745365 None:intergenic
GCAGCTAGGTAGCGTTTATC+CGG 0.392338 2_1:+9745800 None:intergenic
AGGACGGCACGGTTAAAATC+TGG 0.393095 2_1:-9745555 Msa0193890:CDS
GATGGGAACTGGATGTATTC+TGG 0.398060 2_1:-9745583 Msa0193890:CDS
CTGATTCAACTGCTAGGCTT+TGG 0.398439 2_1:-9738762 Msa0193890:CDS
TGTTGTGTTGCACCCAAATC+AGG 0.399358 2_1:-9745377 Msa0193890:intron
CCACTATGTCAAGAGCTTCC+AGG 0.401429 2_1:+9738655 None:intergenic
CAACAGACTGAGCTAATATC+TGG 0.403914 2_1:-9745026 Msa0193890:intron
TGATGTTATTTCTAGGTACT+TGG 0.405905 2_1:-9739955 Msa0193890:intron
GCTTGCTCTTCACTTGTTTG+TGG 0.407426 2_1:+9738255 None:intergenic
GGTTCCAGTGTGATGGGAAC+TGG 0.407444 2_1:-9745594 Msa0193890:CDS
GACTATTCAATATCCTGATT+CGG 0.411230 2_1:-9746763 Msa0193890:intron
CAACCTGAGTCCCTCGCAAC+AGG 0.414556 2_1:+9744405 None:intergenic
GATGGTGCCTACCTTATTAC+AGG 0.417629 2_1:-9739723 Msa0193890:intron
CATGTGCACACCAGGATCAT+TGG 0.419356 2_1:-9737943 Msa0193890:three_prime_UTR
CGCCGGGAGATCGCGATGTC+CGG 0.424678 2_1:+9747073 None:intergenic
ATGATCAAACCTATATATGA+TGG 0.440398 2_1:+9738105 None:intergenic
TTGAAAAGGCATACCGGTTG+AGG 0.444590 2_1:+9745731 None:intergenic
CTACATGATGGGGCTGAACC+TGG 0.444723 2_1:-9738673 Msa0193890:CDS
GTTAAGATATGGAATGTTGA+TGG 0.452389 2_1:-9739909 Msa0193890:CDS
CTCCGGACATCGCGATCTCC+CGG 0.455132 2_1:-9747075 Msa0193890:five_prime_UTR
AGGCTTTGGTCTACGACAAC+TGG 0.457644 2_1:-9738748 Msa0193890:CDS
GCTTGACTCAATTCAACAAC+TGG 0.458215 2_1:-9738343 Msa0193890:three_prime_UTR
AACGCGAGTCATGATGATTT+CGG 0.459923 2_1:-9747158 Msa0193890:five_prime_UTR
GACTGTGTCTTCTCAGTGGA+TGG 0.470196 2_1:-9739741 Msa0193890:CDS
ACCAGTAATGTAATGGCAGT+TGG 0.470299 2_1:-9745616 Msa0193890:CDS
TAGTAGCAGCAAATAATAAT+GGG 0.471047 2_1:-9744445 Msa0193890:CDS
TCATATTCCCTCTGACAACC+TGG 0.475114 2_1:+9745421 None:intergenic
GTTTCTACCGCCGGTGGCGA+CGG 0.478256 2_1:+9747098 None:intergenic
AGTGATGTGGGATGGCAGTT+TGG 0.478829 2_1:-9744468 Msa0193890:CDS
CAGCTAGGTAGCGTTTATCC+GGG 0.479038 2_1:+9745801 None:intergenic
TTATATAATCTTTCTTAGCA+TGG 0.479546 2_1:-9738317 Msa0193890:three_prime_UTR
GACAAGAAGAAAGGGAAAGA+AGG 0.488036 2_1:+9738038 Msa0193880:CDS
GCGCCTGTTGCGAGGGACTC+AGG 0.489088 2_1:-9744408 Msa0193890:intron
CAGGTCATCAACGTTGGGTG+TGG 0.490032 2_1:-9739764 Msa0193890:CDS
CATCAACAATTCCATCATGC+TGG 0.490788 2_1:+9737905 Msa0193880:CDS
GCGCATCTAATGTTATTTGT+TGG 0.491609 2_1:-9738546 Msa0193890:three_prime_UTR
CGGTTAAAATCTGGGATTTG+AGG 0.491874 2_1:-9745546 Msa0193890:intron
TAATGACTCCAAAGTGAAAA+CGG 0.491904 2_1:-9747207 Msa0193890:five_prime_UTR
CCAGTAATGTAATGGCAGTT+GGG 0.496871 2_1:-9745615 Msa0193890:CDS
TAACTCAAATAGCCCTCAAC+CGG 0.501574 2_1:-9745744 Msa0193890:intron
GCCTCCTCAAAATCACCATA+AGG 0.504627 2_1:+9737986 Msa0193880:CDS
CAGCATGATGGAATTGTTGA+TGG 0.507289 2_1:-9737904 Msa0193890:three_prime_UTR
TGTCCGGAGGTTTCTACCGC+CGG 0.511504 2_1:+9747089 None:intergenic
TGATCAAACCTATATATGAT+GGG 0.511896 2_1:+9738106 None:intergenic
AGTTACCATGCCAATGATCC+TGG 0.520944 2_1:+9737933 Msa0193880:CDS
TTTGTTGTGCCCTACATGAT+GGG 0.521009 2_1:-9738684 Msa0193890:CDS
ACTTTGTGTAGCAAGTGAAT+CGG 0.521623 2_1:-9745835 Msa0193890:intron
AAACGCTACCTAGCTGCAGC+TGG 0.523547 2_1:-9745794 Msa0193890:CDS
CTTCCTCTGATTCAACTGCT+AGG 0.524672 2_1:-9738768 Msa0193890:CDS
TTGTAGATTTATGATGCCCT+TGG 0.525184 2_1:+9738707 None:intergenic
AATCAGGATATTGAATAGTC+CGG 0.528032 2_1:+9746766 None:intergenic
GGCTGAGAAGCATGGCAAGA+AGG 0.528484 2_1:+9738007 Msa0193880:CDS
TAAATATTAATATCCTTCGT+TGG 0.532122 2_1:-9738600 Msa0193890:three_prime_UTR
TGGCGACGGTGTCTGGAGAA+AGG 0.533163 2_1:+9747112 None:intergenic
TGAAAAGGCATACCGGTTGA+GGG 0.534461 2_1:+9745732 None:intergenic
ATTTGTTGTGCCCTACATGA+TGG 0.534836 2_1:-9738685 Msa0193890:CDS
CCACCGGCGGTAGAAACCTC+CGG 0.537214 2_1:-9747092 Msa0193890:five_prime_UTR
CACAAGTTCTAGTCCCAAAA+CGG 0.538341 2_1:-9738155 Msa0193890:three_prime_UTR
GGACGGCACGGTTAAAATCT+GGG 0.540623 2_1:-9745554 Msa0193890:CDS
TCTCCAGACACCGTCGCCAC+CGG 0.541470 2_1:-9747108 Msa0193890:five_prime_UTR
GAAATATCCATGTGCACACC+AGG 0.542565 2_1:-9737951 Msa0193890:three_prime_UTR
AGGTTCAGCCCCATCATGTA+GGG 0.542947 2_1:+9738675 None:intergenic
ACATCGCGATCTCCCGGCGG+CGG 0.543537 2_1:-9747069 Msa0193890:five_prime_UTR
CATCACAGGTCATCAACGTT+GGG 0.545633 2_1:-9739769 Msa0193890:intron
CAGGTTCAGCCCCATCATGT+AGG 0.547738 2_1:+9738674 None:intergenic
TTGTGTCCACTGTTAACCAC+TGG 0.548177 2_1:+9738173 None:intergenic
AAATTCATGCAGTTGTGAGT+TGG 0.549311 2_1:-9744964 Msa0193890:intron
ATCAACAATTCCATCATGCT+GGG 0.549338 2_1:+9737906 Msa0193880:CDS
GTGGTGGCAGTAACCGCCGC+CGG 0.550980 2_1:+9747056 None:intergenic
GCAGTTGGGTTCCAGTGTGA+TGG 0.556448 2_1:-9745601 Msa0193890:CDS
CAATGCTTCAGGCTCATCAC+GGG 0.556482 2_1:-9737853 Msa0193890:three_prime_UTR
CGTACAGCTGTATCAACCTC+TGG 0.556960 2_1:+9744500 None:intergenic
CGGACATACCAGTAATGTAA+TGG 0.558118 2_1:-9745623 Msa0193890:CDS
CACCATAAGGCTGAGAAGCA+TGG 0.558365 2_1:+9737999 Msa0193880:CDS
AAGCCTAGCAGTTGAATCAG+AGG 0.558720 2_1:+9738765 None:intergenic
ATGTGTGGCGCCTGTTGCGA+GGG 0.559794 2_1:-9744415 Msa0193890:CDS
TATGTGTGGCGCCTGTTGCG+AGG 0.561962 2_1:-9744416 Msa0193890:CDS
TGGTGGCAGTAACCGCCGCC+GGG 0.563824 2_1:+9747057 None:intergenic
TACGCTCTCTAACAGTGATG+TGG 0.563946 2_1:-9744481 Msa0193890:CDS
CTGTGAGGGTCACAAAACTC+AGG 0.573329 2_1:+9744221 None:intergenic
CAGTTGGGTTCCAGTGTGAT+GGG 0.576975 2_1:-9745600 Msa0193890:CDS
AAATAATCATTAGGAAAACA+TGG 0.582431 2_1:-9738216 Msa0193890:three_prime_UTR
TTCTGGTTCAGAGGACGGCA+CGG 0.583119 2_1:-9745566 Msa0193890:CDS
ATGTATTCTGGTTCAGAGGA+CGG 0.585814 2_1:-9745571 Msa0193890:CDS
TGTGTAGCAAGTGAATCGGC+TGG 0.591353 2_1:-9745831 Msa0193890:intron
CAGCTGGCAATCCTCACATA+CGG 0.592560 2_1:-9745778 Msa0193890:CDS
CCTGGAAGCTCTTGACATAG+TGG 0.594444 2_1:-9738655 Msa0193890:exon
CGGGAGATCGCGATGTCCGG+AGG 0.594636 2_1:+9747076 None:intergenic
ACATTATTTCTGACCTGTGA+GGG 0.596174 2_1:+9744207 None:intergenic
CCAGACACCGTCGCCACCGG+CGG 0.596715 2_1:-9747105 Msa0193890:five_prime_UTR
GAAGATATTAAGGTTTACCA+AGG 0.596926 2_1:-9738724 Msa0193890:CDS
GAGGATTGCCAGCTGCAGCT+AGG 0.598510 2_1:+9745786 None:intergenic
GTAACTACCACCCAGCATGA+TGG 0.598915 2_1:-9737916 Msa0193890:three_prime_UTR
TCAATGCTTCAGGCTCATCA+CGG 0.599934 2_1:-9737854 Msa0193890:three_prime_UTR
TGTGCTTGCAGCTTATGAAG+TGG 0.600333 2_1:+9744275 None:intergenic
CTGGATGTATTCTGGTTCAG+AGG 0.602526 2_1:-9745575 Msa0193890:CDS
CAATGATCCTGGTGTGCACA+TGG 0.602886 2_1:+9737944 Msa0193880:CDS
GCAGGGCACCAGGTTGTCAG+AGG 0.605488 2_1:-9745429 Msa0193890:intron
AGGTCATCAACGTTGGGTGT+GGG 0.610192 2_1:-9739763 Msa0193890:CDS
GGCGGTTACTGCCACCACTC+AGG 0.612622 2_1:-9747051 Msa0193890:intron
GTGGGACTGTGTCTTCTCAG+TGG 0.613297 2_1:-9739745 Msa0193890:CDS
ACATCACAGGTCATCAACGT+TGG 0.615229 2_1:-9739770 Msa0193890:intron
CTTAGCTTCCCAAAATCGAA+TGG 0.615720 2_1:+9746803 None:intergenic
TGGCAGGTAATGAGCTATGA+CGG 0.616839 2_1:-9745643 Msa0193890:intron
AAAATGGCAATATCCGAGTG+TGG 0.617600 2_1:-9744998 Msa0193890:CDS
AAATGGCAATATCCGAGTGT+GGG 0.619634 2_1:-9744997 Msa0193890:CDS
TCTAGTACCTGTAATAAGGT+AGG 0.620505 2_1:+9739716 None:intergenic
TTCAAGCATACATTAACCAG+TGG 0.621391 2_1:-9738189 Msa0193890:three_prime_UTR
AATTGAAATAACCTGAGTGG+TGG 0.629532 2_1:+9747040 None:intergenic
ACATCAAACAACCGTATGTG+AGG 0.631473 2_1:+9745767 None:intergenic
GGTTCTAATGTAGGTGCCAG+AGG 0.632397 2_1:-9744516 Msa0193890:intron
TTGTTGTGCCCTACATGATG+GGG 0.633853 2_1:-9738683 Msa0193890:CDS
CAGGGCACCAGGTTGTCAGA+GGG 0.634834 2_1:-9745428 Msa0193890:CDS
GATCAAACCTATATATGATG+GGG 0.635714 2_1:+9738107 None:intergenic
TCTCTAACAGTGATGTGGGA+TGG 0.636735 2_1:-9744476 Msa0193890:CDS
CCGGAGGTTTCTACCGCCGG+TGG 0.636923 2_1:+9747092 None:intergenic
AAATAATGGATCGAAACACA+TGG 0.638092 2_1:-9738496 Msa0193890:three_prime_UTR
CATAAGCTGCAAGCACACAA+TGG 0.645127 2_1:-9744269 Msa0193890:CDS
CACATTATTTCTGACCTGTG+AGG 0.646521 2_1:+9744206 None:intergenic
CAACAGTGTTAACTGCTGCA+CGG 0.650309 2_1:+9745395 None:intergenic
ACATCCAGTTCCCATCACAC+TGG 0.650873 2_1:+9745590 None:intergenic
AGCTAGGTAGCGTTTATCCG+GGG 0.651380 2_1:+9745802 None:intergenic
TTGCTGTCAAATCCCACACT+CGG 0.654067 2_1:+9744985 None:intergenic
GCACACCAGGATCATTGGCA+TGG 0.654233 2_1:-9737938 Msa0193890:three_prime_UTR
TGTGAGGGTCACAAAACTCA+GGG 0.659560 2_1:+9744222 None:intergenic
GAAAATTGAAATAACCTGAG+TGG 0.662850 2_1:+9747037 None:intergenic
ACGCTCTCTAACAGTGATGT+GGG 0.663603 2_1:-9744480 Msa0193890:CDS
AAGATATTAAGGTTTACCAA+GGG 0.663851 2_1:-9738723 Msa0193890:CDS
TAAACTTCATAGACCAACGA+AGG 0.672723 2_1:+9738587 None:intergenic
AACAATTCCATCATGCTGGG+TGG 0.675369 2_1:+9737909 Msa0193880:CDS
CATTAACCAGTGGTTAACAG+TGG 0.679208 2_1:-9738179 Msa0193890:three_prime_UTR
GAATCGGCTGGAGATAACCC+CGG 0.691008 2_1:-9745819 Msa0193890:CDS
GGTGTGATCATAGCTAGCAG+TGG 0.691765 2_1:+9746824 None:intergenic
GCAGTGGCGAGTAACACTGA+TGG 0.700399 2_1:+9746840 None:intergenic
ATAATGGGACTTGTTATGTG+TGG 0.719713 2_1:-9744430 Msa0193890:CDS
CGGACATCGCGATCTCCCGG+CGG 0.747306 2_1:-9747072 Msa0193890:five_prime_UTR
GTGAGGGTCACAAAACTCAG+GGG 0.767698 2_1:+9744223 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAATTATTAAATAA+AGG - chr2_1:9742558-9742577 Msa0193890:intron 0.0%
!!! TTTTTTAATTATTAAATAAA+GGG - chr2_1:9742559-9742578 Msa0193890:intron 0.0%
!!! TTTTAAATTTTTAAATATTA+TGG + chr2_1:9743983-9744002 None:intergenic 0.0%
!! AAATTACATTGAAAAAAATA+AGG + chr2_1:9738125-9738144 None:intergenic 10.0%
!! TAATTGAAAAAAATTGATAT+AGG - chr2_1:9738430-9738449 Msa0193890:three_prime_UTR 10.0%
!! ATAATTGAAACTTAAAAAAT+AGG + chr2_1:9739081-9739100 None:intergenic 10.0%
!! TATGAGATTTATTTAATTAT+TGG - chr2_1:9739954-9739973 Msa0193890:intron 10.0%
!!! ATTATTGTGATATTTTAATA+AGG + chr2_1:9740744-9740763 None:intergenic 10.0%
!!! TTTTTACTTATTTTTACAAA+TGG - chr2_1:9740788-9740807 Msa0193890:intron 10.0%
!!! TGTAAATTTTTTACAAATAA+TGG - chr2_1:9741068-9741087 Msa0193890:intron 10.0%
!! ATAAGAATAAATTTACTTTA+AGG - chr2_1:9741241-9741260 Msa0193890:intron 10.0%
!! AAAATAATAATGTTAAAGAT+TGG - chr2_1:9741968-9741987 Msa0193890:intron 10.0%
!! TAAAAAATAATGTTAAAGAT+TGG - chr2_1:9742032-9742051 Msa0193890:intron 10.0%
!! TTAATAATTAAAAAAATCAC+GGG + chr2_1:9742554-9742573 None:intergenic 10.0%
!!! TTTTTTACATTTAAAATATG+TGG + chr2_1:9743280-9743299 None:intergenic 10.0%
!!! CATATTTTAAATGTAAAAAA+AGG - chr2_1:9743280-9743299 Msa0193890:intron 10.0%
!!! AAACATTTTAATTTTTTCTT+AGG - chr2_1:9744439-9744458 Msa0193890:CDS 10.0%
!! TCTATTTAAATTAACGTTAA+TGG + chr2_1:9738152-9738171 None:intergenic 15.0%
!! TAAAAAAAGAATGAGAAAAA+CGG + chr2_1:9738391-9738410 None:intergenic 15.0%
!!! AAAAAATGAACAATATTTTG+AGG + chr2_1:9739428-9739447 None:intergenic 15.0%
!!! TCAAAATATTGTTCATTTTT+TGG - chr2_1:9739427-9739446 Msa0193890:intron 15.0%
!! TAAATAAATGAATCCAAATA+TGG - chr2_1:9740253-9740272 Msa0193890:intron 15.0%
!!! TTTTTTATAAGAACCATATT+TGG + chr2_1:9740269-9740288 None:intergenic 15.0%
!! ATGCTTTCTAAATATTATTT+CGG + chr2_1:9740295-9740314 None:intergenic 15.0%
!!! ATTCCTTTTTTAATTAAGTT+CGG - chr2_1:9740959-9740978 Msa0193890:intron 15.0%
!! TAAAAAATAATGGTAAAGAT+TGG - chr2_1:9741648-9741667 Msa0193890:intron 15.0%
!!! CAATCTATAACATTATTTTT+TGG + chr2_1:9741904-9741923 None:intergenic 15.0%
!! CAAAAAATAATGTTATAGAT+TGG - chr2_1:9741902-9741921 Msa0193890:intron 15.0%
!! GAAAATATAATGTTAAAGAT+TGG - chr2_1:9742096-9742115 Msa0193890:intron 15.0%
!! AAAAAGAAAAAAAACTAAAC+AGG + chr2_1:9742353-9742372 None:intergenic 15.0%
!! GTAATATCATAATTCATATA+TGG - chr2_1:9743078-9743097 Msa0193890:intron 15.0%
!! TGGTTTATTTAATAATATGT+TGG - chr2_1:9743375-9743394 Msa0193890:intron 15.0%
!! TTGATTATAGTAAATAACAA+TGG - chr2_1:9744583-9744602 Msa0193890:intron 15.0%
!!! ATTGTTTTTATTCGAAAATT+TGG - chr2_1:9744663-9744682 Msa0193890:intron 15.0%
!!! TTGTTTTTATTCGAAAATTT+GGG - chr2_1:9744664-9744683 Msa0193890:intron 15.0%
!! ATTTCTATTTATATAAAAGG+CGG + chr2_1:9744791-9744810 None:intergenic 15.0%
!!! TTCTCTTTTAACTAAAAATT+TGG + chr2_1:9746026-9746045 None:intergenic 15.0%
!!! ATTTATTTTTACATGACAGA+CGG + chr2_1:9737852-9737871 Msa0193880:intron 20.0%
!!! AGAATGAATTAGCTTTTATA+AGG - chr2_1:9738826-9738845 Msa0193890:intron 20.0%
!! TAACTTCAAAACAAACATAT+AGG + chr2_1:9739145-9739164 None:intergenic 20.0%
!! AGTTATGGTATAAAATGTTT+AGG + chr2_1:9739620-9739639 None:intergenic 20.0%
!!! ATCGTTTTAATTATAAGTCA+GGG + chr2_1:9739807-9739826 None:intergenic 20.0%
!!! AATCGTTTTAATTATAAGTC+AGG + chr2_1:9739808-9739827 None:intergenic 20.0%
!!! TAGAAAAAGAATCTACATTT+TGG + chr2_1:9739833-9739852 None:intergenic 20.0%
!!! TTAATTATTGGTTGATTGTT+TGG - chr2_1:9739966-9739985 Msa0193890:intron 20.0%
!! TGCTTTCTAAATATTATTTC+GGG + chr2_1:9740294-9740313 None:intergenic 20.0%
!!! ATCTATAATTTTTTGTCAAC+TGG + chr2_1:9740564-9740583 None:intergenic 20.0%
!! AGTTGACAAAAAATTATAGA+TGG - chr2_1:9740563-9740582 Msa0193890:intron 20.0%
!! TTTCCGAACTTAATTAAAAA+AGG + chr2_1:9740965-9740984 None:intergenic 20.0%
!!! TTTTTAATTAAGTTCGGAAA+TGG - chr2_1:9740965-9740984 Msa0193890:intron 20.0%
!!! TAAAAAATCAAGGGTATTTT+TGG + chr2_1:9741183-9741202 None:intergenic 20.0%
!!! TCCACATGTTATTTTATAAT+TGG + chr2_1:9741311-9741330 None:intergenic 20.0%
!! ATAGATGTACAACATAAAAT+CGG + chr2_1:9741448-9741467 None:intergenic 20.0%
!!! TATGGAAATATTGTTTTTTG+CGG + chr2_1:9741524-9741543 None:intergenic 20.0%
!! GTGGAAGTAATAAAATAATA+TGG + chr2_1:9741542-9741561 None:intergenic 20.0%
!!! TATGAAAATACTGTTTTTTG+TGG + chr2_1:9741561-9741580 None:intergenic 20.0%
!!! TGTTACTAATCTTTTTTTAG+AGG + chr2_1:9741683-9741702 None:intergenic 20.0%
!! AAAAAGATTAGTAACAAACA+TGG - chr2_1:9741687-9741706 Msa0193890:intron 20.0%
!! AAAAGATTAGTAACAAACAT+GGG - chr2_1:9741688-9741707 Msa0193890:intron 20.0%
!!! GTTACTAATCTTTTTTTTAG+AGG + chr2_1:9741747-9741766 None:intergenic 20.0%
!! TTGTTACTAATCTTTATTAG+AGG + chr2_1:9741811-9741830 None:intergenic 20.0%
!! CAAAAAACATTGTTAAAGAT+TGG - chr2_1:9741838-9741857 Msa0193890:intron 20.0%
!!! TGTAACTAATCTTTTTTTAG+AGG + chr2_1:9741937-9741956 None:intergenic 20.0%
!!! GTTACTGAATTTTTTTTTAG+AGG + chr2_1:9742131-9742150 None:intergenic 20.0%
!!! AAATCCTCTAAAAAAAGATT+AGG - chr2_1:9741676-9741695 Msa0193890:intron 20.0%
!!! ATCAAAGTCGATTAATTTTA+TGG - chr2_1:9742390-9742409 Msa0193890:intron 20.0%
!!! CGTGGTTTTTTTTATATAAA+AGG - chr2_1:9742527-9742546 Msa0193890:intron 20.0%
!!! TATTTTGTTGGATATTGTAT+GGG + chr2_1:9742714-9742733 None:intergenic 20.0%
!! ATACAATATCCAACAAAATA+CGG - chr2_1:9742714-9742733 Msa0193890:intron 20.0%
!!! ACAATTTTGAATTGTTTAGA+TGG + chr2_1:9742759-9742778 None:intergenic 20.0%
!! ATGTAACAAAAAACAAAAGT+TGG + chr2_1:9742846-9742865 None:intergenic 20.0%
!! TTGAGAAAATCACATAATTT+AGG - chr2_1:9742974-9742993 Msa0193890:intron 20.0%
!! TGAGAAAATCACATAATTTA+GGG - chr2_1:9742975-9742994 Msa0193890:intron 20.0%
!!! ATTTAGGGTAATTATATTTG+TGG - chr2_1:9742990-9743009 Msa0193890:intron 20.0%
!! ATTTAATAATATGTTGGATG+TGG - chr2_1:9743381-9743400 Msa0193890:intron 20.0%
!! CATAAATATATAAGTCACAA+GGG - chr2_1:9743537-9743556 Msa0193890:intron 20.0%
!!! TTTTACCTTAATTTTTATCC+AGG - chr2_1:9743873-9743892 Msa0193890:intron 20.0%
!! TTATAAGCAAAATATTGTCA+AGG + chr2_1:9743941-9743960 None:intergenic 20.0%
!!! ATTTTTGTACTTTTTAACGA+AGG + chr2_1:9744529-9744548 None:intergenic 20.0%
!!! ACTATAATCAAAACATGTTT+TGG + chr2_1:9744574-9744593 None:intergenic 20.0%
!! TTTAACTAAATTTAAAGACC+AGG + chr2_1:9744980-9744999 None:intergenic 20.0%
!!! TTTCCTATTGTTATTAATGA+TGG - chr2_1:9745035-9745054 Msa0193890:intron 20.0%
!! ATACCATCATTAATAACAAT+AGG + chr2_1:9745041-9745060 None:intergenic 20.0%
!!! TATTTCTTGATGTTATTTCT+AGG - chr2_1:9745159-9745178 Msa0193890:intron 20.0%
!!! AGGTACTAGATAATTTTTTT+GGG - chr2_1:9745418-9745437 Msa0193890:CDS 20.0%
!! TAAATATTAATATCCTTCGT+TGG - chr2_1:9746521-9746540 Msa0193890:intron 20.0%
!!! AGAGTAATCTTTTCAAATAA+TGG - chr2_1:9746611-9746630 Msa0193890:intron 20.0%
!! TTATATAATCTTTCTTAGCA+TGG - chr2_1:9746804-9746823 Msa0193890:CDS 20.0%
!! AAATAATCATTAGGAAAACA+TGG - chr2_1:9746905-9746924 Msa0193890:exon 20.0%
! CTGATGAATTCAATGAAATT+AGG - chr2_1:9738174-9738193 Msa0193890:three_prime_UTR 25.0%
! AGTCAAAAGAAAAAAAGAAG+AGG - chr2_1:9738232-9738251 Msa0193890:three_prime_UTR 25.0%
!! TGTACCTTATGTGAAATTTT+AGG - chr2_1:9738492-9738511 Msa0193890:three_prime_UTR 25.0%
!!! AATCTAGAATGTGAGTTTTT+AGG - chr2_1:9738607-9738626 Msa0193890:three_prime_UTR 25.0%
!!! ATCTAGAATGTGAGTTTTTA+GGG - chr2_1:9738608-9738627 Msa0193890:three_prime_UTR 25.0%
! ACCAGAAAAAAACTCAAAAA+AGG - chr2_1:9738718-9738737 Msa0193890:CDS 25.0%
!!! TCCTTTTTTGAGTTTTTTTC+TGG + chr2_1:9738722-9738741 None:intergenic 25.0%
! TGATTGCTACTAATTTATCA+TGG - chr2_1:9739207-9739226 Msa0193890:intron 25.0%
! TACTAATTTATCATGGAGAA+TGG - chr2_1:9739214-9739233 Msa0193890:intron 25.0%
!!! TGATTTTAAGTTCCATATAG+TGG - chr2_1:9739244-9739263 Msa0193890:intron 25.0%
!!! AATGAACAATATTTTGAGGT+AGG + chr2_1:9739424-9739443 None:intergenic 25.0%
! AATTTATGTTCCTGATTATG+TGG - chr2_1:9739458-9739477 Msa0193890:intron 25.0%
!! AAATTTGAGGTCTAAAGTTA+TGG + chr2_1:9739635-9739654 None:intergenic 25.0%
!! AACTTTAGACCTCAAATTTT+TGG - chr2_1:9739636-9739655 Msa0193890:intron 25.0%
!! ACTTTAGACCTCAAATTTTT+GGG - chr2_1:9739637-9739656 Msa0193890:intron 25.0%
!! TTATTTGATGACAAAAATGC+AGG - chr2_1:9739674-9739693 Msa0193890:intron 25.0%
!! TATTTGATGACAAAAATGCA+GGG - chr2_1:9739675-9739694 Msa0193890:intron 25.0%
!! AAAATTCTGAAGAGATAACT+AGG - chr2_1:9739857-9739876 Msa0193890:intron 25.0%
!! CTTTTTCTTTCTATATCGTT+TGG - chr2_1:9740466-9740485 Msa0193890:intron 25.0%
!!! GGAACGTTATTTTAAATTTG+TGG - chr2_1:9740584-9740603 Msa0193890:intron 25.0%
!!! TAAATTTGTGGTTCTAATGT+AGG - chr2_1:9740596-9740615 Msa0193890:intron 25.0%
! TAGTAGCAGCAAATAATAAT+GGG - chr2_1:9740676-9740695 Msa0193890:intron 25.0%
! AAAATTGACAATTTGACATG+AGG + chr2_1:9740772-9740791 None:intergenic 25.0%
! GCCAATTATAAAATAACATG+TGG - chr2_1:9741307-9741326 Msa0193890:intron 25.0%
!!! AAATATTGTTTTTTGCGGAA+GGG + chr2_1:9741519-9741538 None:intergenic 25.0%
! CAAACGTGAGTAAAAAATAA+TGG - chr2_1:9741638-9741657 Msa0193890:intron 25.0%
! TTGAGAAAAACTAAACAATG+CGG + chr2_1:9742294-9742313 None:intergenic 25.0%
!! GATTATATATTTGACTTTGC+TGG - chr2_1:9742412-9742431 Msa0193890:intron 25.0%
!! ATTTTGTTGGATATTGTATG+GGG + chr2_1:9742713-9742732 None:intergenic 25.0%
!! GTATTTTGTTGGATATTGTA+TGG + chr2_1:9742715-9742734 None:intergenic 25.0%
!!! GTGTTTCTATTTTTAGTTGT+TGG + chr2_1:9742806-9742825 None:intergenic 25.0%
! TAACAAAAAACAAAAGTTGG+TGG + chr2_1:9742843-9742862 None:intergenic 25.0%
! TCTCAAAATATCAACGTTAT+TGG + chr2_1:9742960-9742979 None:intergenic 25.0%
! ATCATTTGTAGGTGTAATTA+TGG + chr2_1:9743113-9743132 None:intergenic 25.0%
!! TTTTGAACATCATCATTTGT+AGG + chr2_1:9743124-9743143 None:intergenic 25.0%
! AACAAACTATGTTATTCTCT+TGG + chr2_1:9743175-9743194 None:intergenic 25.0%
! CCTTGTGACTTATATATTTA+TGG + chr2_1:9743539-9743558 None:intergenic 25.0%
! CCATAAATATATAAGTCACA+AGG - chr2_1:9743536-9743555 Msa0193890:intron 25.0%
! ATTAAAGAAGAGAAAAGAGA+AGG - chr2_1:9743668-9743687 Msa0193890:intron 25.0%
!!! TCACATTATTTTTTCACTAG+CGG + chr2_1:9744103-9744122 None:intergenic 25.0%
!!! GTAAAATGTTTTGGAAACAT+TGG + chr2_1:9744260-9744279 None:intergenic 25.0%
! TAAAGTTACATAACTTACTG+CGG + chr2_1:9744374-9744393 None:intergenic 25.0%
! TATGTAACTTTACTAGTGTA+TGG - chr2_1:9744382-9744401 Msa0193890:intron 25.0%
! ATGTAACTTTACTAGTGTAT+GGG - chr2_1:9744383-9744402 Msa0193890:intron 25.0%
!! TTTTAACGAAGGAATCATTA+TGG + chr2_1:9744518-9744537 None:intergenic 25.0%
! ACTGTTATGAATATAATCTG+TGG - chr2_1:9744756-9744775 Msa0193890:intron 25.0%
! CTGTTATGAATATAATCTGT+GGG - chr2_1:9744757-9744776 Msa0193890:intron 25.0%
! TTTAGTTAAAACTGTTTGAC+TGG - chr2_1:9744990-9745009 Msa0193890:CDS 25.0%
! TGTTATTAATGATGGTATAC+TGG - chr2_1:9745043-9745062 Msa0193890:intron 25.0%
!! TTTAAGGAGAACGAAATTTT+GGG + chr2_1:9745318-9745337 None:intergenic 25.0%
! ATTATCTAGTACCTGTAATA+AGG + chr2_1:9745412-9745431 None:intergenic 25.0%
!!! CAGGTACTAGATAATTTTTT+TGG - chr2_1:9745417-9745436 Msa0193890:CDS 25.0%
!!! GGTACTAGATAATTTTTTTG+GGG - chr2_1:9745419-9745438 Msa0193890:CDS 25.0%
! ATTATACAACAGTGTTCAAA+AGG + chr2_1:9745488-9745507 None:intergenic 25.0%
!! ATCAGTATACTTAGACTTTT+TGG - chr2_1:9745531-9745550 Msa0193890:intron 25.0%
!! TCAGTATACTTAGACTTTTT+GGG - chr2_1:9745532-9745551 Msa0193890:intron 25.0%
!!! CTTTTGAAACTTTTTTACAC+TGG + chr2_1:9745603-9745622 None:intergenic 25.0%
! CAGTGTAAAAAAGTTTCAAA+AGG - chr2_1:9745601-9745620 Msa0193890:CDS 25.0%
! GGAAATATGAAGTATAGATA+AGG - chr2_1:9745700-9745719 Msa0193890:intron 25.0%
!!! CAAATTTGTGTAGTTTTAGA+TGG - chr2_1:9745739-9745758 Msa0193890:intron 25.0%
!! TCTTTAAAGACAAACAATCA+AGG + chr2_1:9745800-9745819 None:intergenic 25.0%
! AAAGAAAATTAAGTGTCTCA+TGG - chr2_1:9745815-9745834 Msa0193890:CDS 25.0%
! AAGAAAATTAAGTGTCTCAT+GGG - chr2_1:9745816-9745835 Msa0193890:CDS 25.0%
!! CATTTTCTAAATCTGGATTA+TGG + chr2_1:9745876-9745895 None:intergenic 25.0%
!! GATTTTATAGTTGCATAATG+AGG - chr2_1:9746153-9746172 Msa0193890:intron 25.0%
! AAGGAGGAAAATGATAAAAT+TGG + chr2_1:9746205-9746224 None:intergenic 25.0%
! GCATTATCAATTGTGAATTT+CGG - chr2_1:9746254-9746273 Msa0193890:intron 25.0%
! TGGAGTACAATTATTGTTAT+TGG - chr2_1:9746277-9746296 Msa0193890:intron 25.0%
! AAGATATTAAGGTTTACCAA+GGG - chr2_1:9746398-9746417 Msa0193890:intron 25.0%
! TGATCAAACCTATATATGAT+GGG + chr2_1:9747018-9747037 None:intergenic 25.0%
! ATGATCAAACCTATATATGA+TGG + chr2_1:9747019-9747038 None:intergenic 25.0%
!! TTAATCAGAATGTTCACTTT+TGG - chr2_1:9747058-9747077 Msa0193890:five_prime_UTR 25.0%
! AAAAAAAGGACAAGAAGAAA+GGG + chr2_1:9747094-9747113 None:intergenic 25.0%
TAATGACTCCAAAGTGAAAA+CGG - chr2_1:9737914-9737933 Msa0193890:three_prime_UTR 30.0%
GAAAATTGAAATAACCTGAG+TGG + chr2_1:9738087-9738106 None:intergenic 30.0%
!! ATTAGGTTTTGTGTTGTTAG+AGG - chr2_1:9738191-9738210 Msa0193890:three_prime_UTR 30.0%
AATCAGGATATTGAATAGTC+CGG + chr2_1:9738358-9738377 None:intergenic 30.0%
GACTATTCAATATCCTGATT+CGG - chr2_1:9738358-9738377 Msa0193890:three_prime_UTR 30.0%
CGATCCTAAAATTTCACATA+AGG + chr2_1:9738499-9738518 None:intergenic 30.0%
AGTTGAAACTAACACTGATA+CGG - chr2_1:9738693-9738712 Msa0193890:CDS 30.0%
TTCAATGTAATCACACATGT+CGG - chr2_1:9738747-9738766 Msa0193890:CDS 30.0%
! CTTTTATAAGGTGAACTCTA+GGG - chr2_1:9738838-9738857 Msa0193890:intron 30.0%
ATCAATCACCATCTAACAAA+AGG + chr2_1:9739191-9739210 None:intergenic 30.0%
! TTATCATGGAGAATGGTTTT+TGG - chr2_1:9739221-9739240 Msa0193890:intron 30.0%
TCTATTTGCCCAAAAATTTG+AGG + chr2_1:9739648-9739667 None:intergenic 30.0%
AGTGAAACTTAACCTGATTT+GGG + chr2_1:9739759-9739778 None:intergenic 30.0%
TAGTGAAACTTAACCTGATT+TGG + chr2_1:9739760-9739779 None:intergenic 30.0%
GGTTAAGTTTCACTATTTGT+TGG - chr2_1:9739765-9739784 Msa0193890:intron 30.0%
GATTGTTTGGTACTTAAATC+TGG - chr2_1:9739979-9739998 Msa0193890:intron 30.0%
ATGGCTCAATATTGAGTAAT+GGG - chr2_1:9740010-9740029 Msa0193890:intron 30.0%
! AATATTGAGTAATGGGATTG+CGG - chr2_1:9740017-9740036 Msa0193890:intron 30.0%
CTAATATCTGGTGATCAAAA+TGG - chr2_1:9740107-9740126 Msa0193890:intron 30.0%
GAAATAGATAGAGTACATGT+AGG + chr2_1:9740405-9740424 None:intergenic 30.0%
!!! AAGAAAAAGCATCTACGTTT+TGG + chr2_1:9740455-9740474 None:intergenic 30.0%
TTACTGTACACAATTTCCTT+TGG - chr2_1:9740490-9740509 Msa0193890:intron 30.0%
GTAGTAGCAGCAAATAATAA+TGG - chr2_1:9740675-9740694 Msa0193890:intron 30.0%
ATTAAGTTCGGAAATGGAAA+AGG - chr2_1:9740971-9740990 Msa0193890:intron 30.0%
AGTGGTTAAACTAAGCATTT+AGG - chr2_1:9741014-9741033 Msa0193890:intron 30.0%
AACTAAGCATTTAGGTAATC+CGG - chr2_1:9741022-9741041 Msa0193890:intron 30.0%
!!! CTTTGTTTTAATCAACACAC+CGG + chr2_1:9741044-9741063 None:intergenic 30.0%
AACAGTAAGAACAGTTCATA+AGG + chr2_1:9741286-9741305 None:intergenic 30.0%
!!! TTTTTTGTGAGTTTGATCTG+TGG + chr2_1:9741387-9741406 None:intergenic 30.0%
AAATACTTGGCAATCTTTGT+CGG + chr2_1:9741490-9741509 None:intergenic 30.0%
!!! GAAATATTGTTTTTTGCGGA+AGG + chr2_1:9741520-9741539 None:intergenic 30.0%
TTACAACTGATCAAAGGTTA+AGG + chr2_1:9741618-9741637 None:intergenic 30.0%
AAAGATTAGTAACAAACGTG+AGG - chr2_1:9741816-9741835 Msa0193890:intron 30.0%
!!! GAGTCCTAATCTTTTTTTAG+AGG + chr2_1:9742195-9742214 None:intergenic 30.0%
TGAGAAAAACTAAACAATGC+GGG + chr2_1:9742293-9742312 None:intergenic 30.0%
TAAGAATTATTTGACCTTGC+TGG - chr2_1:9742475-9742494 Msa0193890:intron 30.0%
TAAGCAATTATAAACCAGCA+AGG + chr2_1:9742492-9742511 None:intergenic 30.0%
! TTATACAAACTATGATAGCG+TGG - chr2_1:9742509-9742528 Msa0193890:intron 30.0%
! TTGATTTCACCGTATTTTGT+TGG + chr2_1:9742726-9742745 None:intergenic 30.0%
GGTAATTATATTTGTGGATG+CGG - chr2_1:9742996-9743015 Msa0193890:intron 30.0%
GTTCAGAAACATCTAATATG+AGG - chr2_1:9743030-9743049 Msa0193890:intron 30.0%
!! TAGTTTGTTGTCATTTAACG+AGG - chr2_1:9743186-9743205 Msa0193890:intron 30.0%
TTTCTAAACTAAACTGCTCA+AGG - chr2_1:9743244-9743263 Msa0193890:intron 30.0%
! TGTTTTCTACTAAGCACAAA+GGG + chr2_1:9743487-9743506 None:intergenic 30.0%
AAATATATAAGTCACAAGGG+CGG - chr2_1:9743540-9743559 Msa0193890:intron 30.0%
AAGCTACATATAATTGACCA+TGG + chr2_1:9743610-9743629 None:intergenic 30.0%
GTTTGCCTGGATAAAAATTA+AGG + chr2_1:9743881-9743900 None:intergenic 30.0%
!!! TCAACATATTTTAGTTTGCC+TGG + chr2_1:9743894-9743913 None:intergenic 30.0%
TTCATTTAAGTAAAAGCGAG+CGG - chr2_1:9744181-9744200 Msa0193890:intron 30.0%
GTAGCTATTTACATTGGATT+TGG - chr2_1:9744203-9744222 Msa0193890:intron 30.0%
!! ATTTGGTTTGAATACATGCA+AGG - chr2_1:9744220-9744239 Msa0193890:intron 30.0%
!! TTTGGTTTGAATACATGCAA+GGG - chr2_1:9744221-9744240 Msa0193890:CDS 30.0%
! TGTTTCCAAAACATTTTACC+TGG - chr2_1:9744261-9744280 Msa0193890:CDS 30.0%
! TTGAACCAGGTAAAATGTTT+TGG + chr2_1:9744269-9744288 None:intergenic 30.0%
TTTGTTTAGTGCTTAATGCA+TGG + chr2_1:9744298-9744317 None:intergenic 30.0%
AAAGTTACATAACTTACTGC+GGG + chr2_1:9744373-9744392 None:intergenic 30.0%
TGTAACTTTACTAGTGTATG+GGG - chr2_1:9744384-9744403 Msa0193890:intron 30.0%
ATAACAATGGCCTAGATATA+TGG - chr2_1:9744596-9744615 Msa0193890:intron 30.0%
TAACAATGGCCTAGATATAT+GGG - chr2_1:9744597-9744616 Msa0193890:intron 30.0%
CAACACAAAAACTTCAGATA+CGG - chr2_1:9744630-9744649 Msa0193890:intron 30.0%
TTGCTAACTCATACAAGAAT+AGG + chr2_1:9744899-9744918 None:intergenic 30.0%
AGTTGTAAAAGAGTTTGAAC+TGG - chr2_1:9744925-9744944 Msa0193890:intron 30.0%
TAACATCTTAAATGAGCTAG+AGG + chr2_1:9745138-9745157 None:intergenic 30.0%
!! TGATGTTATTTCTAGGTACT+TGG - chr2_1:9745166-9745185 Msa0193890:intron 30.0%
CTGATCATACTGTTAAGATA+TGG - chr2_1:9745201-9745220 Msa0193890:intron 30.0%
GTTAAGATATGGAATGTTGA+TGG - chr2_1:9745212-9745231 Msa0193890:intron 30.0%
!! AAATTTTGGGGAAAGTTGTA+TGG + chr2_1:9745305-9745324 None:intergenic 30.0%
! TTAAGGAGAACGAAATTTTG+GGG + chr2_1:9745317-9745336 None:intergenic 30.0%
! GTTTAAGGAGAACGAAATTT+TGG + chr2_1:9745319-9745338 None:intergenic 30.0%
! TGTAGTTGTTACTTAGAAAC+AGG - chr2_1:9745633-9745652 Msa0193890:CDS 30.0%
TCATATTTCCTTTGAACTGA+AGG + chr2_1:9745690-9745709 None:intergenic 30.0%
AAACAATCAAGGTTAGCAAT+TGG + chr2_1:9745789-9745808 None:intergenic 30.0%
GATGAAGAAAAAACGTTTAG+CGG - chr2_1:9746051-9746070 Msa0193890:intron 30.0%
TTGCAACATATGAGGAATAA+AGG + chr2_1:9746224-9746243 None:intergenic 30.0%
ATTCCTCATATGTTGCAAAA+TGG - chr2_1:9746226-9746245 Msa0193890:intron 30.0%
TTATCAATTGTGAATTTCGG+TGG - chr2_1:9746257-9746276 Msa0193890:intron 30.0%
! AAGTGTATTGGTGTGAATAT+TGG + chr2_1:9746322-9746341 None:intergenic 30.0%
GAAGATATTAAGGTTTACCA+AGG - chr2_1:9746397-9746416 Msa0193890:intron 30.0%
!! AAATAATGGATCGAAACACA+TGG - chr2_1:9746625-9746644 Msa0193890:intron 30.0%
! GGGTTTTTAATCATCAATAG+AGG + chr2_1:9746848-9746867 None:intergenic 30.0%
TTATACACCCCATCATATAT+AGG - chr2_1:9747007-9747026 Msa0193890:intron 30.0%
GATCAAACCTATATATGATG+GGG + chr2_1:9747017-9747036 None:intergenic 30.0%
GAAAAAAAGGACAAGAAGAA+AGG + chr2_1:9747095-9747114 None:intergenic 30.0%
TTATGTAAACAGCAACTTTC+AGG + chr2_1:9747243-9747262 None:intergenic 30.0%
!!! AAAACGGCGTGTTTTAGTTT+TGG - chr2_1:9737930-9737949 Msa0193890:three_prime_UTR 35.0%
!!! GCGTGTTTTAGTTTTGGTAA+AGG - chr2_1:9737936-9737955 Msa0193890:three_prime_UTR 35.0%
AATTGAAATAACCTGAGTGG+TGG + chr2_1:9738084-9738103 None:intergenic 35.0%
AAAAAGAAGAGGAAGATTCG+TGG - chr2_1:9738243-9738262 Msa0193890:three_prime_UTR 35.0%
! ATGATCACACCATTCGATTT+TGG - chr2_1:9738309-9738328 Msa0193890:three_prime_UTR 35.0%
! TGATCACACCATTCGATTTT+GGG - chr2_1:9738310-9738329 Msa0193890:three_prime_UTR 35.0%
TAGGATCGAAGTTTGTGATT+TGG - chr2_1:9738511-9738530 Msa0193890:three_prime_UTR 35.0%
!! TTGATAGTCAGAGTGTTTTC+AGG + chr2_1:9738570-9738589 None:intergenic 35.0%
CTGACTATCAAGTCAGTAAT+TGG - chr2_1:9738579-9738598 Msa0193890:three_prime_UTR 35.0%
TGTAGCATCAAAACTTCTGA+TGG + chr2_1:9738805-9738824 None:intergenic 35.0%
! GCTTTTATAAGGTGAACTCT+AGG - chr2_1:9738837-9738856 Msa0193890:intron 35.0%
!! CTAAGAGTGTTGTCGAATTA+GGG + chr2_1:9738879-9738898 None:intergenic 35.0%
TTTATGCAAGCAAACTGTTC+TGG + chr2_1:9739047-9739066 None:intergenic 35.0%
! GCAAAATTAGTGCCACTATA+TGG + chr2_1:9739259-9739278 None:intergenic 35.0%
ACTTTGTGTAGCAAGTGAAT+CGG - chr2_1:9739286-9739305 Msa0193890:intron 35.0%
! TATCAGTTGAAAAGGCATAC+CGG + chr2_1:9739399-9739418 None:intergenic 35.0%
AGAGATAACTAGGACTGAAT+TGG - chr2_1:9739867-9739886 Msa0193890:intron 35.0%
CTTAAATCTGGATTCTGACA+TGG - chr2_1:9739991-9740010 Msa0193890:intron 35.0%
CATGGCTCAATATTGAGTAA+TGG - chr2_1:9740009-9740028 Msa0193890:intron 35.0%
AAATTCATGCAGTTGTGAGT+TGG - chr2_1:9740157-9740176 Msa0193890:intron 35.0%
ATAGATAGAGTACATGTAGG+AGG + chr2_1:9740402-9740421 None:intergenic 35.0%
TACACAATTTCCTTTGGCTA+AGG - chr2_1:9740496-9740515 Msa0193890:intron 35.0%
!! ATAATGGGACTTGTTATGTG+TGG - chr2_1:9740691-9740710 Msa0193890:intron 35.0%
!! ACATTATTTCTGACCTGTGA+GGG + chr2_1:9740917-9740936 None:intergenic 35.0%
!! CGGTGTGTTGATTAAAACAA+AGG - chr2_1:9741042-9741061 Msa0193890:intron 35.0%
!! GACTTCTGAGATTTCAATTG+TGG + chr2_1:9741094-9741113 None:intergenic 35.0%
TGAGTTTGATCTGTGGTTAA+CGG + chr2_1:9741380-9741399 None:intergenic 35.0%
ATGTACAACATAAAATCGGC+TGG + chr2_1:9741444-9741463 None:intergenic 35.0%
! ATCTTTGTCGGTTGTATTGA+GGG + chr2_1:9741478-9741497 None:intergenic 35.0%
! AATCTTTGTCGGTTGTATTG+AGG + chr2_1:9741479-9741498 None:intergenic 35.0%
GGAAGGGATATGAAAATACT+TGG + chr2_1:9741503-9741522 None:intergenic 35.0%
! CGTTTGTTACAACTGATCAA+AGG + chr2_1:9741624-9741643 None:intergenic 35.0%
ATTCTGAATTCTGATGCAGA+AGG + chr2_1:9742327-9742346 None:intergenic 35.0%
TTCCTTTAAACGACAGTGAA+AGG + chr2_1:9742618-9742637 None:intergenic 35.0%
TACATTCAAACCATCATCTG+AGG - chr2_1:9742861-9742880 Msa0193890:intron 35.0%
TTAGCATCCATACTTCTTAG+CGG + chr2_1:9742903-9742922 None:intergenic 35.0%
! TTGTCATTTAACGAGGTTGA+AGG - chr2_1:9743193-9743212 Msa0193890:intron 35.0%
! TGTCATTTAACGAGGTTGAA+GGG - chr2_1:9743194-9743213 Msa0193890:intron 35.0%
! GTAATGGAACACGATTGTTA+TGG - chr2_1:9743350-9743369 Msa0193890:intron 35.0%
! CTGTTTTCTACTAAGCACAA+AGG + chr2_1:9743488-9743507 None:intergenic 35.0%
ATAGATTCCGACATTGAGAA+TGG + chr2_1:9743567-9743586 None:intergenic 35.0%
!!! TTTTTTCACTAGCGGAAAGA+CGG + chr2_1:9744095-9744114 None:intergenic 35.0%
GAAGTGATAAAGGCTAATCA+CGG + chr2_1:9744324-9744343 None:intergenic 35.0%
GTTATGTGCTGAAGTGATAA+AGG + chr2_1:9744334-9744353 None:intergenic 35.0%
TTGCATGAACCCATATATCT+AGG + chr2_1:9744609-9744628 None:intergenic 35.0%
TGCACATGTATGTTGAAAGT+TGG + chr2_1:9744701-9744720 None:intergenic 35.0%
ATATTTCCTGTGTGCTTCTA+TGG - chr2_1:9744809-9744828 Msa0193890:intron 35.0%
CTAAATTTAAAGACCAGGAC+AGG + chr2_1:9744975-9744994 None:intergenic 35.0%
ATTAATGATGGTATACTGGC+TGG - chr2_1:9745047-9745066 Msa0193890:intron 35.0%
ACACTAGAGAAGACTTTGAT+AGG - chr2_1:9745239-9745258 Msa0193890:intron 35.0%
AATTTCGTTCTCCTTAAACG+AGG - chr2_1:9745320-9745339 Msa0193890:intron 35.0%
TCTAGTACCTGTAATAAGGT+AGG + chr2_1:9745408-9745427 None:intergenic 35.0%
GGTATTTGTTCTTATAGTCC+CGG - chr2_1:9745440-9745459 Msa0193890:intron 35.0%
ATACTGATGTGACTACGAAA+GGG + chr2_1:9745519-9745538 None:intergenic 35.0%
TATACTGATGTGACTACGAA+AGG + chr2_1:9745520-9745539 None:intergenic 35.0%
TCTTATGCATTGTCCAGAAT+TGG - chr2_1:9745662-9745681 Msa0193890:intron 35.0%
AATTGGATCCTTCAGTTCAA+AGG - chr2_1:9745679-9745698 Msa0193890:intron 35.0%
! TGTCGAGCATTTTCTAAATC+TGG + chr2_1:9745883-9745902 None:intergenic 35.0%
AATTGTGAAAGCTGAAACAC+TGG - chr2_1:9746075-9746094 Msa0193890:intron 35.0%
CAACATATGAGGAATAAAGG+AGG + chr2_1:9746221-9746240 None:intergenic 35.0%
! AGACCATTTTGCAACATATG+AGG + chr2_1:9746232-9746251 None:intergenic 35.0%
GACAACTGGTGAAGATATTA+AGG - chr2_1:9746387-9746406 Msa0193890:intron 35.0%
TTGTAGATTTATGATGCCCT+TGG + chr2_1:9746417-9746436 None:intergenic 35.0%
TAAACTTCATAGACCAACGA+AGG + chr2_1:9746537-9746556 None:intergenic 35.0%
! GCGCATCTAATGTTATTTGT+TGG - chr2_1:9746575-9746594 Msa0193890:intron 35.0%
CATGTGTTGCATTTCAAAAC+TGG + chr2_1:9746703-9746722 None:intergenic 35.0%
!! GACTAATTTTCTGTGTTGCT+AGG - chr2_1:9746753-9746772 Msa0193890:intron 35.0%
!! TAATTTTCTGTGTTGCTAGG+AGG - chr2_1:9746756-9746775 Msa0193890:intron 35.0%
TTCAAGCATACATTAACCAG+TGG - chr2_1:9746932-9746951 Msa0193890:intron 35.0%
! AATGCAATCTACACCGTTTT+GGG + chr2_1:9746982-9747001 None:intergenic 35.0%
! AAATGCAATCTACACCGTTT+TGG + chr2_1:9746983-9747002 None:intergenic 35.0%
ATCAACAATTCCATCATGCT+GGG + chr2_1:9747218-9747237 None:intergenic 35.0%
!! AAAACACGCCGTTTTCACTT+TGG + chr2_1:9737925-9737944 Msa0193880:CDS 40.0%
AACGCGAGTCATGATGATTT+CGG - chr2_1:9737963-9737982 Msa0193890:three_prime_UTR 40.0%
AAGAGGAAGATTCGTGGTTT+AGG - chr2_1:9738249-9738268 Msa0193890:three_prime_UTR 40.0%
CTTAGCTTCCCAAAATCGAA+TGG + chr2_1:9738321-9738340 None:intergenic 40.0%
AAACGGAATCAAACCGAATC+AGG + chr2_1:9738374-9738393 None:intergenic 40.0%
! TCGAAGTTTGTGATTTGGAG+TGG - chr2_1:9738516-9738535 Msa0193890:three_prime_UTR 40.0%
!! CCTAAGAGTGTTGTCGAATT+AGG + chr2_1:9738880-9738899 None:intergenic 40.0%
CCTAATTCGACAACACTCTT+AGG - chr2_1:9738877-9738896 Msa0193890:intron 40.0%
CAAGTCGAGAGATGTAATCA+CGG + chr2_1:9738945-9738964 None:intergenic 40.0%
! ATTACATCTCTCGACTTGCT+TGG - chr2_1:9738947-9738966 Msa0193890:intron 40.0%
! TTACATCTCTCGACTTGCTT+GGG - chr2_1:9738948-9738967 Msa0193890:intron 40.0%
ACTAGTGAAACGGAACACTA+CGG + chr2_1:9739005-9739024 None:intergenic 40.0%
!! TTCCGTTTCACTAGTGGATT+GGG - chr2_1:9739010-9739029 Msa0193890:intron 40.0%
! CATCTAACAAAAGGCATGTG+TGG + chr2_1:9739182-9739201 None:intergenic 40.0%
! CACACATGCCTTTTGTTAGA+TGG - chr2_1:9739180-9739199 Msa0193890:intron 40.0%
! GATTCACTTGCTACACAAAG+TGG + chr2_1:9739287-9739306 None:intergenic 40.0%
ACATCAAACAACCGTATGTG+AGG + chr2_1:9739357-9739376 None:intergenic 40.0%
TAACTCAAATAGCCCTCAAC+CGG - chr2_1:9739377-9739396 Msa0193890:intron 40.0%
GGTAGGTGTATCAGTTGAAA+AGG + chr2_1:9739407-9739426 None:intergenic 40.0%
TATGTTCCTGATTATGTGGC+AGG - chr2_1:9739462-9739481 Msa0193890:intron 40.0%
TCATTACCTGCCACATAATC+AGG + chr2_1:9739471-9739490 None:intergenic 40.0%
CGGACATACCAGTAATGTAA+TGG - chr2_1:9739498-9739517 Msa0193890:intron 40.0%
ACCAGTAATGTAATGGCAGT+TGG - chr2_1:9739505-9739524 Msa0193890:intron 40.0%
CCAGTAATGTAATGGCAGTT+GGG - chr2_1:9739506-9739525 Msa0193890:intron 40.0%
!! ATGTATTCTGGTTCAGAGGA+CGG - chr2_1:9739550-9739569 Msa0193890:intron 40.0%
! CGGTTAAAATCTGGGATTTG+AGG - chr2_1:9739575-9739594 Msa0193890:intron 40.0%
CAACAGACTGAGCTAATATC+TGG - chr2_1:9740095-9740114 Msa0193890:intron 40.0%
AAAATGGCAATATCCGAGTG+TGG - chr2_1:9740123-9740142 Msa0193890:intron 40.0%
AAATGGCAATATCCGAGTGT+GGG - chr2_1:9740124-9740143 Msa0193890:intron 40.0%
TTGTAAGCTCTTGTTGCTCA+TGG - chr2_1:9740349-9740368 Msa0193890:intron 40.0%
!!! ATCTACGTTTTGGAGAAGCA+TGG + chr2_1:9740445-9740464 None:intergenic 40.0%
!! CACATTATTTCTGACCTGTG+AGG + chr2_1:9740918-9740937 None:intergenic 40.0%
TTCGGAAATGGAAAAGGTTG+TGG - chr2_1:9740977-9740996 Msa0193890:intron 40.0%
! AACCCAAAAGTGTGCTGAAA+GGG + chr2_1:9741148-9741167 None:intergenic 40.0%
AATGGAGACGATTAGTGACA+TGG + chr2_1:9741342-9741361 None:intergenic 40.0%
TGGTTAACGGAGGTAAAAGA+GGG + chr2_1:9741367-9741386 None:intergenic 40.0%
! TCTTTGTCGGTTGTATTGAG+GGG + chr2_1:9741477-9741496 None:intergenic 40.0%
! CTCCTTTCACTGTCGTTTAA+AGG - chr2_1:9742613-9742632 Msa0193890:intron 40.0%
TTGCGTACATGCAGAAAGTT+TGG + chr2_1:9742669-9742688 None:intergenic 40.0%
CAATTGATAAACTGCTCCCA+TGG - chr2_1:9742686-9742705 Msa0193890:intron 40.0%
! CTTTTTATGGCCTCAGATGA+TGG + chr2_1:9742874-9742893 None:intergenic 40.0%
! ATCTGAGGCCATAAAAAGAG+AGG - chr2_1:9742876-9742895 Msa0193890:intron 40.0%
! TTAGCGGTCCTCTCTTTTTA+TGG + chr2_1:9742887-9742906 None:intergenic 40.0%
GTCAATATCCGTGTTGTATC+TGG + chr2_1:9742934-9742953 None:intergenic 40.0%
! GAGGAGTGTATGTGATTCAT+AGG - chr2_1:9743049-9743068 Msa0193890:intron 40.0%
GTCATTTAACGAGGTTGAAG+GGG - chr2_1:9743195-9743214 Msa0193890:intron 40.0%
CGAAACATAGACCCTAGATA+TGG - chr2_1:9743322-9743341 Msa0193890:intron 40.0%
CATTACACAGGCCATATCTA+GGG + chr2_1:9743336-9743355 None:intergenic 40.0%
ACAATCGTGTTCCATTACAC+AGG + chr2_1:9743348-9743367 None:intergenic 40.0%
TTGGATGTGGAAATCCTAAC+AGG - chr2_1:9743394-9743413 Msa0193890:intron 40.0%
ATCCTAACAGGAAGCAATGT+TGG - chr2_1:9743406-9743425 Msa0193890:intron 40.0%
TTCCAACATTGCTTCCTGTT+AGG + chr2_1:9743411-9743430 None:intergenic 40.0%
ATGTCGGAATCTATCTTCCA+CGG - chr2_1:9743573-9743592 Msa0193890:intron 40.0%
GAGAAAAGAGAAGGAGAAGA+TGG - chr2_1:9743677-9743696 Msa0193890:intron 40.0%
! TTTTTCACTAGCGGAAAGAC+GGG + chr2_1:9744094-9744113 None:intergenic 40.0%
TGCATGGTGAAAATTGAACC+AGG + chr2_1:9744282-9744301 None:intergenic 40.0%
! TAACTTACTGCGGGTTTGTT+TGG + chr2_1:9744364-9744383 None:intergenic 40.0%
! ATATGACCATAGAAGCACAC+AGG + chr2_1:9744818-9744837 None:intergenic 40.0%
AAAGTGCAACTCCATCTTCA+TGG + chr2_1:9744851-9744870 None:intergenic 40.0%
!! GAGACCACTTTTATCATTCC+AGG - chr2_1:9745073-9745092 Msa0193890:intron 40.0%
CAGTCCTGGAATGATAAAAG+TGG + chr2_1:9745080-9745099 None:intergenic 40.0%
TGTACAACCAACCTCGTTTA+AGG + chr2_1:9745334-9745353 None:intergenic 40.0%
TGAACTGAAGGATCCAATTC+TGG + chr2_1:9745678-9745697 None:intergenic 40.0%
!!! TGTAGTTTTAGATGGCTGTC+TGG - chr2_1:9745747-9745766 Msa0193890:CDS 40.0%
AAAATGCTCGACAGAGTGTA+GGG - chr2_1:9745890-9745909 Msa0193890:intron 40.0%
GTGTAGGGACAAACTTGAAT+TGG - chr2_1:9745905-9745924 Msa0193890:intron 40.0%
GCTGCAATGACAAAGTGTAT+TGG + chr2_1:9746334-9746353 None:intergenic 40.0%
!! ATTTGTTGTGCCCTACATGA+TGG - chr2_1:9746436-9746455 Msa0193890:intron 40.0%
! TTTGTTGTGCCCTACATGAT+GGG - chr2_1:9746437-9746456 Msa0193890:intron 40.0%
GCTTGACTCAATTCAACAAC+TGG - chr2_1:9746778-9746797 Msa0193890:CDS 40.0%
CTTGCTCTTCACTTGTTTGT+GGG + chr2_1:9746868-9746887 None:intergenic 40.0%
CATTAACCAGTGGTTAACAG+TGG - chr2_1:9746942-9746961 Msa0193890:intron 40.0%
! CACAAGTTCTAGTCCCAAAA+CGG - chr2_1:9746966-9746985 Msa0193890:intron 40.0%
GACAAGAAGAAAGGGAAAGA+AGG + chr2_1:9747086-9747105 None:intergenic 40.0%
GCATGGCAAGAAGGAAAAAA+AGG + chr2_1:9747108-9747127 None:intergenic 40.0%
!! TCAGCCTTATGGTGATTTTG+AGG - chr2_1:9747131-9747150 Msa0193890:five_prime_UTR 40.0%
CATCAACAATTCCATCATGC+TGG + chr2_1:9747219-9747238 None:intergenic 40.0%
! CAGCATGATGGAATTGTTGA+TGG - chr2_1:9747217-9747236 Msa0193890:five_prime_UTR 40.0%
ACATAAGTGCTCAATGCTTC+AGG - chr2_1:9747257-9747276 Msa0193890:five_prime_UTR 40.0%
!! CGATTTTGGGAAGCTAAGAG+TGG - chr2_1:9738323-9738342 Msa0193890:three_prime_UTR 45.0%
!!! GTTTTCAGGTACATCACCTC+AGG + chr2_1:9738556-9738575 None:intergenic 45.0%
TCAACTCGTGACTCAGGTTA+AGG + chr2_1:9738649-9738668 None:intergenic 45.0%
CTTCTGATGGAATGTGTGTC+TGG + chr2_1:9738792-9738811 None:intergenic 45.0%
!! GGTGAACTCTAGGGTTTCTA+AGG - chr2_1:9738847-9738866 Msa0193890:intron 45.0%
!! GAACTCTAGGGTTTCTAAGG+TGG - chr2_1:9738850-9738869 Msa0193890:intron 45.0%
TCGACAACACTCTTAGGAGA+TGG - chr2_1:9738883-9738902 Msa0193890:intron 45.0%
ACTTGCTTGGGTAGATCTCT+AGG - chr2_1:9738960-9738979 Msa0193890:intron 45.0%
CTTGCTTGGGTAGATCTCTA+GGG - chr2_1:9738961-9738980 Msa0193890:intron 45.0%
CTAGTGAAACGGAACACTAC+GGG + chr2_1:9739004-9739023 None:intergenic 45.0%
GTAGTGTTCCGTTTCACTAG+TGG - chr2_1:9739004-9739023 Msa0193890:intron 45.0%
! GTTCCGTTTCACTAGTGGAT+TGG - chr2_1:9739009-9739028 Msa0193890:intron 45.0%
AGCCCAATCCACTAGTGAAA+CGG + chr2_1:9739015-9739034 None:intergenic 45.0%
!! TTTCACTAGTGGATTGGGCT+TGG - chr2_1:9739015-9739034 Msa0193890:intron 45.0%
! TGAAAAGGCATACCGGTTGA+GGG + chr2_1:9739392-9739411 None:intergenic 45.0%
! TTGAAAAGGCATACCGGTTG+AGG + chr2_1:9739393-9739412 None:intergenic 45.0%
TGGCAGGTAATGAGCTATGA+CGG - chr2_1:9739478-9739497 Msa0193890:intron 45.0%
CCCAACTGCCATTACATTAC+TGG + chr2_1:9739509-9739528 None:intergenic 45.0%
GATGGGAACTGGATGTATTC+TGG - chr2_1:9739538-9739557 Msa0193890:intron 45.0%
!! CTGGATGTATTCTGGTTCAG+AGG - chr2_1:9739546-9739565 Msa0193890:intron 45.0%
TCATATTCCCTCTGACAACC+TGG + chr2_1:9739703-9739722 None:intergenic 45.0%
CAACAGTGTTAACTGCTGCA+CGG + chr2_1:9739729-9739748 None:intergenic 45.0%
TGTTGTGTTGCACCCAAATC+AGG - chr2_1:9739744-9739763 Msa0193890:CDS 45.0%
TTGCTGTCAAATCCCACACT+CGG + chr2_1:9740139-9740158 None:intergenic 45.0%
! GAGGATATAGTGAGAAGCAC+TGG + chr2_1:9740526-9740545 None:intergenic 45.0%
CAACTGGTGAGAGAGAAACA+GGG + chr2_1:9740548-9740567 None:intergenic 45.0%
TCAACTGGTGAGAGAGAAAC+AGG + chr2_1:9740549-9740568 None:intergenic 45.0%
TACGCTCTCTAACAGTGATG+TGG - chr2_1:9740640-9740659 Msa0193890:intron 45.0%
ACGCTCTCTAACAGTGATGT+GGG - chr2_1:9740641-9740660 Msa0193890:intron 45.0%
TCTCTAACAGTGATGTGGGA+TGG - chr2_1:9740645-9740664 Msa0193890:intron 45.0%
TGTGCTTGCAGCTTATGAAG+TGG + chr2_1:9740849-9740868 None:intergenic 45.0%
CATAAGCTGCAAGCACACAA+TGG - chr2_1:9740852-9740871 Msa0193890:intron 45.0%
TGTGAGGGTCACAAAACTCA+GGG + chr2_1:9740902-9740921 None:intergenic 45.0%
! TACCCCTTTCAGCACACTTT+TGG - chr2_1:9741142-9741161 Msa0193890:intron 45.0%
! ACCCCTTTCAGCACACTTTT+GGG - chr2_1:9741143-9741162 Msa0193890:intron 45.0%
! ACCCAAAAGTGTGCTGAAAG+GGG + chr2_1:9741147-9741166 None:intergenic 45.0%
! CAACCCAAAAGTGTGCTGAA+AGG + chr2_1:9741149-9741168 None:intergenic 45.0%
!! CTTTCAGCACACTTTTGGGT+TGG - chr2_1:9741147-9741166 Msa0193890:intron 45.0%
CGGAGGTAAAAGAGGGTTAA+TGG + chr2_1:9741360-9741379 None:intergenic 45.0%
GTGGTTAACGGAGGTAAAAG+AGG + chr2_1:9741368-9741387 None:intergenic 45.0%
GTTTGATCTGTGGTTAACGG+AGG + chr2_1:9741377-9741396 None:intergenic 45.0%
CGACAGTGAAAGGAGCTTAA+CGG + chr2_1:9742608-9742627 None:intergenic 45.0%
GGATATTGTATGGGGACCAT+GGG + chr2_1:9742705-9742724 None:intergenic 45.0%
TGGATATTGTATGGGGACCA+TGG + chr2_1:9742706-9742725 None:intergenic 45.0%
CACAGACACCAGATACAACA+CGG - chr2_1:9742923-9742942 Msa0193890:intron 45.0%
GTGTATGTGATTCATAGGCG+AGG - chr2_1:9743054-9743073 Msa0193890:intron 45.0%
CCATTACACAGGCCATATCT+AGG + chr2_1:9743337-9743356 None:intergenic 45.0%
CCTAGATATGGCCTGTGTAA+TGG - chr2_1:9743334-9743353 Msa0193890:intron 45.0%
CGAGCGGTAGCTATTTACAT+TGG - chr2_1:9744197-9744216 Msa0193890:intron 45.0%
TTCACCTCTTGCCATGAAGA+TGG - chr2_1:9744837-9744856 Msa0193890:intron 45.0%
AACTCCATCTTCATGGCAAG+AGG + chr2_1:9744844-9744863 None:intergenic 45.0%
! ATCTAATAGAGCACCTGTCC+TGG - chr2_1:9744959-9744978 Msa0193890:intron 45.0%
TCGTTCTCCTTAAACGAGGT+TGG - chr2_1:9745324-9745343 Msa0193890:intron 45.0%
ACATCACAGGTCATCAACGT+TGG - chr2_1:9745351-9745370 Msa0193890:intron 45.0%
CATCACAGGTCATCAACGTT+GGG - chr2_1:9745352-9745371 Msa0193890:intron 45.0%
GATGGTGCCTACCTTATTAC+AGG - chr2_1:9745398-9745417 Msa0193890:CDS 45.0%
TGTTCTTATAGTCCCGGAAC+TGG - chr2_1:9745446-9745465 Msa0193890:intron 45.0%
CCACTTATATGTCCAGTTCC+GGG + chr2_1:9745461-9745480 None:intergenic 45.0%
CCCACTTATATGTCCAGTTC+CGG + chr2_1:9745462-9745481 None:intergenic 45.0%
CCGGAACTGGACATATAAGT+GGG - chr2_1:9745459-9745478 Msa0193890:intron 45.0%
GAAAATGCTCGACAGAGTGT+AGG - chr2_1:9745889-9745908 Msa0193890:intron 45.0%
TGTGAAAGCTGAAACACTGG+TGG - chr2_1:9746078-9746097 Msa0193890:intron 45.0%
CTTCCTCTGATTCAACTGCT+AGG - chr2_1:9746353-9746372 Msa0193890:intron 45.0%
AAGCCTAGCAGTTGAATCAG+AGG + chr2_1:9746359-9746378 None:intergenic 45.0%
CTGATTCAACTGCTAGGCTT+TGG - chr2_1:9746359-9746378 Msa0193890:intron 45.0%
TTGTTGTGCCCTACATGATG+GGG - chr2_1:9746438-9746457 Msa0193890:intron 45.0%
GCTTGCTCTTCACTTGTTTG+TGG + chr2_1:9746869-9746888 None:intergenic 45.0%
TTGTGTCCACTGTTAACCAC+TGG + chr2_1:9746951-9746970 None:intergenic 45.0%
!! GCCTTATGGTGATTTTGAGG+AGG - chr2_1:9747134-9747153 Msa0193890:five_prime_UTR 45.0%
GCCTCCTCAAAATCACCATA+AGG + chr2_1:9747138-9747157 None:intergenic 45.0%
!! ATGGTGATTTTGAGGAGGCT+CGG - chr2_1:9747139-9747158 Msa0193890:five_prime_UTR 45.0%
GAAATATCCATGTGCACACC+AGG - chr2_1:9747170-9747189 Msa0193890:five_prime_UTR 45.0%
AGTTACCATGCCAATGATCC+TGG + chr2_1:9747191-9747210 None:intergenic 45.0%
AACAATTCCATCATGCTGGG+TGG + chr2_1:9747215-9747234 None:intergenic 45.0%
TCAATGCTTCAGGCTCATCA+CGG - chr2_1:9747267-9747286 Msa0193890:five_prime_UTR 45.0%
!! AAATTAAAATAAAAAATCAA+GGG + chr2_1:9741192-9741211 None:intergenic 5.0%
!! AAAATTAAAATAAAAAATCA+AGG + chr2_1:9741193-9741212 None:intergenic 5.0%
!! AAAAAAAAAATGTTAAATAT+TGG - chr2_1:9741712-9741731 Msa0193890:intron 5.0%
!! TATATTAAATATTAATAAGT+AGG - chr2_1:9742245-9742264 Msa0193890:intron 5.0%
!! TTTAATAATTAAAAAAATCA+CGG + chr2_1:9742555-9742574 None:intergenic 5.0%
!!! TTTGTTTTTAATTTAATTAA+GGG + chr2_1:9743448-9743467 None:intergenic 5.0%
!!! ATTTGTTTTTAATTTAATTA+AGG + chr2_1:9743449-9743468 None:intergenic 5.0%
!!! AATATTTCTATTTATATAAA+AGG + chr2_1:9744794-9744813 None:intergenic 5.0%
!! TAAAATAAAAAATAATCATT+AGG - chr2_1:9746896-9746915 Msa0193890:CDS 5.0%
GGTGTGATCATAGCTAGCAG+TGG + chr2_1:9738300-9738319 None:intergenic 50.0%
CTAAGAGTGGTCGCTGTTAC+CGG - chr2_1:9738336-9738355 Msa0193890:three_prime_UTR 50.0%
GGAACTAGATTGTCTGCCTG+AGG - chr2_1:9738537-9738556 Msa0193890:three_prime_UTR 50.0%
GAACTCTCAACTCGTGACTC+AGG + chr2_1:9738655-9738674 None:intergenic 50.0%
TGTGTAGCAAGTGAATCGGC+TGG - chr2_1:9739290-9739309 Msa0193890:intron 50.0%
AGCTAGGTAGCGTTTATCCG+GGG + chr2_1:9739322-9739341 None:intergenic 50.0%
CAGCTAGGTAGCGTTTATCC+GGG + chr2_1:9739323-9739342 None:intergenic 50.0%
GCAGCTAGGTAGCGTTTATC+CGG + chr2_1:9739324-9739343 None:intergenic 50.0%
CAGCTGGCAATCCTCACATA+CGG - chr2_1:9739343-9739362 Msa0193890:intron 50.0%
CAGTTGGGTTCCAGTGTGAT+GGG - chr2_1:9739521-9739540 Msa0193890:intron 50.0%
ACATCCAGTTCCCATCACAC+TGG + chr2_1:9739534-9739553 None:intergenic 50.0%
AGGACGGCACGGTTAAAATC+TGG - chr2_1:9739566-9739585 Msa0193890:intron 50.0%
GGACGGCACGGTTAAAATCT+GGG - chr2_1:9739567-9739586 Msa0193890:intron 50.0%
! TGACAAAAATGCAGGGCACC+AGG - chr2_1:9739682-9739701 Msa0193890:intron 50.0%
CGAACAGTCATCGTGCTGTA+AGG + chr2_1:9739893-9739912 None:intergenic 50.0%
CACTGGTCAACCTTAGCCAA+AGG + chr2_1:9740509-9740528 None:intergenic 50.0%
! GGTTCTAATGTAGGTGCCAG+AGG - chr2_1:9740605-9740624 Msa0193890:intron 50.0%
CGTACAGCTGTATCAACCTC+TGG + chr2_1:9740624-9740643 None:intergenic 50.0%
AGTGATGTGGGATGGCAGTT+TGG - chr2_1:9740653-9740672 Msa0193890:intron 50.0%
GTGAGGGTCACAAAACTCAG+GGG + chr2_1:9740901-9740920 None:intergenic 50.0%
CTGTGAGGGTCACAAAACTC+AGG + chr2_1:9740903-9740922 None:intergenic 50.0%
!! CTGAGTTTTGTGACCCTCAC+AGG - chr2_1:9740901-9740920 Msa0193890:intron 50.0%
GTGGTCAAGTGAACAGCTAG+TGG - chr2_1:9740996-9741015 Msa0193890:intron 50.0%
CTGATGCAGAAGGTTGAGAG+AGG + chr2_1:9742317-9742336 None:intergenic 50.0%
GTGAAAGGAGCTTAACGGCA+GGG + chr2_1:9742603-9742622 None:intergenic 50.0%
AGTGAAAGGAGCTTAACGGC+AGG + chr2_1:9742604-9742623 None:intergenic 50.0%
GAGAGGACCGCTAAGAAGTA+TGG - chr2_1:9742893-9742912 Msa0193890:intron 50.0%
GGAACACGATTGTTATGGCG+TGG - chr2_1:9743355-9743374 Msa0193890:intron 50.0%
CGTTAGCGCAGTAGAAAGAG+CGG - chr2_1:9744049-9744068 Msa0193890:intron 50.0%
CAGTAGAAAGAGCGGACAGA+CGG - chr2_1:9744057-9744076 Msa0193890:intron 50.0%
AGTAGAAAGAGCGGACAGAC+GGG - chr2_1:9744058-9744077 Msa0193890:intron 50.0%
TTTGACTGGACTGCGTCTCT+AGG - chr2_1:9745004-9745023 Msa0193890:CDS 50.0%
TTGACTGGACTGCGTCTCTA+GGG - chr2_1:9745005-9745024 Msa0193890:CDS 50.0%
ACGACAGTGAGATTCAGTCC+TGG + chr2_1:9745094-9745113 None:intergenic 50.0%
! CGAGGTTGGTTGTACATCAC+AGG - chr2_1:9745338-9745357 Msa0193890:intron 50.0%
AGGTCATCAACGTTGGGTGT+GGG - chr2_1:9745358-9745377 Msa0193890:intron 50.0%
GACTGTGTCTTCTCAGTGGA+TGG - chr2_1:9745380-9745399 Msa0193890:CDS 50.0%
CCCGGAACTGGACATATAAG+TGG - chr2_1:9745458-9745477 Msa0193890:intron 50.0%
! CTGAAACACTGGTGGTGAGT+GGG - chr2_1:9746086-9746105 Msa0193890:intron 50.0%
! TGAAACACTGGTGGTGAGTG+GGG - chr2_1:9746087-9746106 Msa0193890:intron 50.0%
! AGGCTTTGGTCTACGACAAC+TGG - chr2_1:9746373-9746392 Msa0193890:intron 50.0%
AGGTTCAGCCCCATCATGTA+GGG + chr2_1:9746449-9746468 None:intergenic 50.0%
CCACTATGTCAAGAGCTTCC+AGG + chr2_1:9746469-9746488 None:intergenic 50.0%
CCTGGAAGCTCTTGACATAG+TGG - chr2_1:9746466-9746485 Msa0193890:intron 50.0%
TGCCATGCTTCTCAGCCTTA+TGG - chr2_1:9747120-9747139 Msa0193890:five_prime_UTR 50.0%
CACCATAAGGCTGAGAAGCA+TGG + chr2_1:9747125-9747144 None:intergenic 50.0%
CAATGATCCTGGTGTGCACA+TGG + chr2_1:9747180-9747199 None:intergenic 50.0%
CATGTGCACACCAGGATCAT+TGG - chr2_1:9747178-9747197 Msa0193890:five_prime_UTR 50.0%
GTAACTACCACCCAGCATGA+TGG - chr2_1:9747205-9747224 Msa0193890:five_prime_UTR 50.0%
CAATGCTTCAGGCTCATCAC+GGG - chr2_1:9747268-9747287 Msa0193890:five_prime_UTR 50.0%
GCAGTGGCGAGTAACACTGA+TGG + chr2_1:9738284-9738303 None:intergenic 55.0%
! TCTAGGGCATCCTCACAGCA+TGG - chr2_1:9738977-9738996 Msa0193890:intron 55.0%
!! CTAGTGGATTGGGCTTGGCT+TGG - chr2_1:9739020-9739039 Msa0193890:intron 55.0%
GAATCGGCTGGAGATAACCC+CGG - chr2_1:9739302-9739321 Msa0193890:intron 55.0%
AAACGCTACCTAGCTGCAGC+TGG - chr2_1:9739327-9739346 Msa0193890:intron 55.0%
GCAGTTGGGTTCCAGTGTGA+TGG - chr2_1:9739520-9739539 Msa0193890:intron 55.0%
! GGTTCCAGTGTGATGGGAAC+TGG - chr2_1:9739527-9739546 Msa0193890:intron 55.0%
!! TTCTGGTTCAGAGGACGGCA+CGG - chr2_1:9739555-9739574 Msa0193890:intron 55.0%
CTGGTGAGAGAGAAACAGGG+AGG + chr2_1:9740545-9740564 None:intergenic 55.0%
GGGCGGACCATTCTCAATGT+CGG - chr2_1:9743557-9743576 Msa0193890:intron 55.0%
CCATGGCTGAAAACATGCCG+TGG + chr2_1:9743593-9743612 None:intergenic 55.0%
! CCACGGCATGTTTTCAGCCA+TGG - chr2_1:9743590-9743609 Msa0193890:intron 55.0%
CAGGTCATCAACGTTGGGTG+TGG - chr2_1:9745357-9745376 Msa0193890:intron 55.0%
GTGGGACTGTGTCTTCTCAG+TGG - chr2_1:9745376-9745395 Msa0193890:intron 55.0%
! GCTGAAACACTGGTGGTGAG+TGG - chr2_1:9746085-9746104 Msa0193890:intron 55.0%
CAGGTTCAGCCCCATCATGT+AGG + chr2_1:9746450-9746469 None:intergenic 55.0%
! CTACATGATGGGGCTGAACC+TGG - chr2_1:9746448-9746467 Msa0193890:intron 55.0%
! GGCTGAGAAGCATGGCAAGA+AGG + chr2_1:9747117-9747136 None:intergenic 55.0%
GCACACCAGGATCATTGGCA+TGG - chr2_1:9747183-9747202 Msa0193890:five_prime_UTR 55.0%
TGGCGACGGTGTCTGGAGAA+AGG + chr2_1:9738012-9738031 Msa0193880:CDS 60.0%
TGTCCGGAGGTTTCTACCGC+CGG + chr2_1:9738035-9738054 Msa0193880:CDS 60.0%
CACTACGGGACCATGCTGTG+AGG + chr2_1:9738990-9739009 None:intergenic 60.0%
GAGGATTGCCAGCTGCAGCT+AGG + chr2_1:9739338-9739357 None:intergenic 60.0%
! CAGGGCACCAGGTTGTCAGA+GGG - chr2_1:9739693-9739712 Msa0193890:intron 60.0%
TATGTGTGGCGCCTGTTGCG+AGG - chr2_1:9740705-9740724 Msa0193890:intron 60.0%
ATGTGTGGCGCCTGTTGCGA+GGG - chr2_1:9740706-9740725 Msa0193890:intron 60.0%
CAACCTGAGTCCCTCGCAAC+AGG + chr2_1:9740719-9740738 None:intergenic 60.0%
TCTCCAGACACCGTCGCCAC+CGG - chr2_1:9738013-9738032 Msa0193890:three_prime_UTR 65.0%
GTTTCTACCGCCGGTGGCGA+CGG + chr2_1:9738026-9738045 Msa0193880:CDS 65.0%
CCACCGGCGGTAGAAACCTC+CGG - chr2_1:9738029-9738048 Msa0193890:three_prime_UTR 65.0%
CTCCGGACATCGCGATCTCC+CGG - chr2_1:9738046-9738065 Msa0193890:three_prime_UTR 65.0%
GGCGGTTACTGCCACCACTC+AGG - chr2_1:9738070-9738089 Msa0193890:three_prime_UTR 65.0%
! GCAGGGCACCAGGTTGTCAG+AGG - chr2_1:9739692-9739711 Msa0193890:intron 65.0%
CCGGAGGTTTCTACCGCCGG+TGG + chr2_1:9738032-9738051 Msa0193880:CDS 70.0%
CGGGAGATCGCGATGTCCGG+AGG + chr2_1:9738048-9738067 Msa0193880:CDS 70.0%
CGCCGGGAGATCGCGATGTC+CGG + chr2_1:9738051-9738070 Msa0193880:CDS 70.0%
CGGACATCGCGATCTCCCGG+CGG - chr2_1:9738049-9738068 Msa0193890:three_prime_UTR 70.0%
ACATCGCGATCTCCCGGCGG+CGG - chr2_1:9738052-9738071 Msa0193890:three_prime_UTR 70.0%
TGGTGGCAGTAACCGCCGCC+GGG + chr2_1:9738067-9738086 None:intergenic 70.0%
GTGGTGGCAGTAACCGCCGC+CGG + chr2_1:9738068-9738087 None:intergenic 70.0%
GCGCCTGTTGCGAGGGACTC+AGG - chr2_1:9740713-9740732 Msa0193890:intron 70.0%
CCAGACACCGTCGCCACCGG+CGG - chr2_1:9738016-9738035 Msa0193890:three_prime_UTR 75.0%
! CCGCCGGTGGCGACGGTGTC+TGG + chr2_1:9738019-9738038 Msa0193880:CDS 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 9737829 9747314 9737829 ID=Msa0193890;Name=Msa0193890
chr2_1 mRNA 9737829 9747314 9737829 ID=Msa0193890-mRNA-1;Parent=Msa0193890;Name=Msa0193890-mRNA-1;_AED=0.08;_eAED=0.08;_QI=294|1|1|1|0.9|0.90|11|834|331
chr2_1 exon 9737829 9738790 9737829 ID=Msa0193890-mRNA-1:exon:4480;Parent=Msa0193890-mRNA-1
chr2_1 exon 9739724 9739783 9739724 ID=Msa0193890-mRNA-1:exon:4479;Parent=Msa0193890-mRNA-1
chr2_1 exon 9739883 9739962 9739883 ID=Msa0193890-mRNA-1:exon:4478;Parent=Msa0193890-mRNA-1
chr2_1 exon 9744221 9744315 9744221 ID=Msa0193890-mRNA-1:exon:4477;Parent=Msa0193890-mRNA-1
chr2_1 exon 9744409 9744525 9744409 ID=Msa0193890-mRNA-1:exon:4476;Parent=Msa0193890-mRNA-1
chr2_1 exon 9744965 9745042 9744965 ID=Msa0193890-mRNA-1:exon:4475;Parent=Msa0193890-mRNA-1
chr2_1 exon 9745378 9745447 9745378 ID=Msa0193890-mRNA-1:exon:4474;Parent=Msa0193890-mRNA-1
chr2_1 exon 9745547 9745659 9745547 ID=Msa0193890-mRNA-1:exon:4473;Parent=Msa0193890-mRNA-1
chr2_1 exon 9745745 9745846 9745745 ID=Msa0193890-mRNA-1:exon:4472;Parent=Msa0193890-mRNA-1
chr2_1 exon 9746764 9746947 9746764 ID=Msa0193890-mRNA-1:exon:4471;Parent=Msa0193890-mRNA-1
chr2_1 exon 9747052 9747314 9747052 ID=Msa0193890-mRNA-1:exon:4470;Parent=Msa0193890-mRNA-1
chr2_1 five_prime_UTR 9747052 9747314 9747052 ID=Msa0193890-mRNA-1:five_prime_utr;Parent=Msa0193890-mRNA-1
chr2_1 five_prime_UTR 9746917 9746947 9746917 ID=Msa0193890-mRNA-1:five_prime_utr;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9746764 9746916 9746764 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9745745 9745846 9745745 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9745547 9745659 9745547 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9745378 9745447 9745378 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9744965 9745042 9744965 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9744409 9744525 9744409 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9744221 9744315 9744221 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9739883 9739962 9739883 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9739724 9739783 9739724 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 CDS 9738663 9738790 9738663 ID=Msa0193890-mRNA-1:cds;Parent=Msa0193890-mRNA-1
chr2_1 three_prime_UTR 9737829 9738662 9737829 ID=Msa0193890-mRNA-1:three_prime_utr;Parent=Msa0193890-mRNA-1
Gene Sequence

>Msa0193890

ATGATAGTCAAAAGAAAAAAAGAAGAGGAAGATTCGTGGTTTAGGATGAGTCAACCATCAGTGTTACTCGCCACTGCTAGCTATGATCACACCATTCGATTTTGGGAAGCTAAGAGTGGTCGCTGTTACCGGACTATTCAATATCCTGATTCGCAAGTGAATCGGCTGGAGATAACCCCGGATAAACGCTACCTAGCTGCAGCTGGCAATCCTCACATACGGTTGTTTGATGTTAACTCAAATAGCCCTCAACCGGTAATGAGCTATGACGGACATACCAGTAATGTAATGGCAGTTGGGTTCCAGTGTGATGGGAACTGGATGTATTCTGGTTCAGAGGACGGCACGGTTAAAATCTGGGATTTGAGGGCACCAGGTTGTCAGAGGGAATATGAAAGCCGTGCAGCAGTTAACACTGTTGTGTTGCACCCAAATCAGACTGAGCTAATATCTGGTGATCAAAATGGCAATATCCGAGTGTGGGATTTGACAGCAAATTCATGCAGTTGTGAGTTGGTGCCAGAGGTTGATACAGCTGTACGCTCTCTAACAGTGATGTGGGATGGCAGTTTGGTAGTAGCAGCAAATAATAATGGGACTTGTTATGTGTGGCGCCTGTTGCGAGGGACTCAGACAATGACAAACTTTGAGCCACTTCATAAGCTGCAAGCACACAATGGCTACATTCTCAAATGTGTTTTATCCCCTGAGTTTTGTGACCCTCACAGGTACTTGGCAACTGCATCTTCTGATCATACTGTTAAGATATGGAATGTTGATGGTTTTACACTAGAGAAGACTTTGATAGGTCATCAACGTTGGGTGTGGGACTGTGTCTTCTCAGTGGATGGTGCCTACCTTATTACAGCTTCCTCTGATTCAACTGCTAGGCTTTGGTCTACGACAACTGGTGAAGATATTAAGGTTTACCAAGGGCATCATAAATCTACAATTTGTTGTGCCCTACATGATGGGGCTGAACCTGGAAGCTCTTGA
Protein sequence

>Msa0193890

MIVKRKKEEEDSWFRMSQPSVLLATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRLFDVNSNSPQPVMSYDGHTSNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNNGTCYVWRLLRGTQTMTNFEPLHKLQAHNGYILKCVLSPEFCDPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDSTARLWSTTTGEDIKVYQGHHKSTICCALHDGAEPGSS*