Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460620 | XP_003600650.2 | 100.000 | 212 | 0 | 0 | 1 | 212 | 1 | 212 | 1.71e-154 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460620 | sp|Q96324|GSTFB_ARATH | 58.962 | 212 | 87 | 0 | 1 | 212 | 1 | 212 | 1.73e-92 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460620 | A0A2Z2Z7E2 | 100.000 | 212 | 0 | 0 | 1 | 212 | 1 | 212 | 8.19e-155 | 436 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010560 | Msa0460620 | 0.831896 | 1.286812e-55 | -8.615850e-47 |
| Msa0050990 | Msa0460620 | 0.833292 | 5.798130e-56 | -8.615850e-47 |
| Msa0101300 | Msa0460620 | 0.827634 | 1.403993e-54 | -8.615850e-47 |
| Msa0110970 | Msa0460620 | 0.810414 | 1.166678e-50 | -8.615850e-47 |
| Msa0193890 | Msa0460620 | 0.831048 | 2.081132e-55 | -8.615850e-47 |
| Msa0367850 | Msa0460620 | 0.936277 | 2.244529e-97 | -8.615850e-47 |
| Msa0368080 | Msa0460620 | 0.824262 | 8.877546e-54 | -8.615850e-47 |
| Msa0415620 | Msa0460620 | 0.949041 | 2.834404e-107 | -8.615850e-47 |
| Msa0460620 | Msa0460980 | 0.823028 | 1.726433e-53 | -8.615850e-47 |
| Msa0460620 | Msa0461720 | 0.802687 | 4.985448e-49 | -8.615850e-47 |
| Msa0460620 | Msa0506980 | 0.841027 | 6.095009e-58 | -8.615850e-47 |
| Msa0460620 | Msa0737190 | 0.803026 | 4.242045e-49 | -8.615850e-47 |
| Msa0460620 | Msa0740640 | 0.806192 | 9.267278e-50 | -8.615850e-47 |
| Msa0460620 | Msa0754030 | 0.817433 | 3.305668e-52 | -8.615850e-47 |
| Msa0460620 | Msa0807110 | 0.819098 | 1.388453e-52 | -8.615850e-47 |
| Msa0460620 | Msa0816450 | 0.801803 | 7.578766e-49 | -8.615850e-47 |
| Msa0460620 | Msa0833040 | 0.818965 | 1.488385e-52 | -8.615850e-47 |
| Msa0460620 | Msa1082500 | 0.807195 | 5.689836e-50 | -8.615850e-47 |
| Msa0460620 | Msa1085300 | 0.801359 | 9.347664e-49 | -8.615850e-47 |
| Msa0460620 | Msa1129550 | 0.810496 | 1.119640e-50 | -8.615850e-47 |
| Msa0460620 | Msa1129730 | 0.810609 | 1.058590e-50 | -8.615850e-47 |
| Msa0460620 | Msa1357240 | 0.803446 | 3.472806e-49 | -8.615850e-47 |
| Msa0460620 | Msa1408870 | 0.818897 | 1.542414e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460620 | MtrunA17_Chr3g0109891 | 100.000 | 212 | 0 | 0 | 1 | 212 | 1 | 212 | 1.58e-158 | 436 |
| Msa0460620 | MtrunA17_Chr3g0095781 | 58.294 | 211 | 87 | 1 | 1 | 211 | 1 | 210 | 3.57e-87 | 256 |
| Msa0460620 | MtrunA17_Chr5g0442751 | 55.399 | 213 | 89 | 4 | 1 | 210 | 1 | 210 | 1.41e-79 | 237 |
| Msa0460620 | MtrunA17_Chr5g0442741 | 52.113 | 213 | 98 | 3 | 1 | 211 | 1 | 211 | 3.92e-75 | 226 |
| Msa0460620 | MtrunA17_Chr3g0095821 | 55.488 | 164 | 73 | 0 | 48 | 211 | 1 | 164 | 1.66e-67 | 204 |
| Msa0460620 | MtrunA17_Chr1g0157211 | 45.794 | 214 | 111 | 2 | 3 | 211 | 5 | 218 | 1.35e-61 | 191 |
| Msa0460620 | MtrunA17_Chr1g0195811 | 43.961 | 207 | 115 | 1 | 2 | 208 | 3 | 208 | 3.03e-59 | 185 |
| Msa0460620 | MtrunA17_Chr1g0195821 | 44.928 | 207 | 113 | 1 | 2 | 208 | 3 | 208 | 3.28e-58 | 182 |
| Msa0460620 | MtrunA17_Chr1g0195831 | 42.584 | 209 | 118 | 2 | 1 | 208 | 1 | 208 | 9.45e-56 | 176 |
| Msa0460620 | MtrunA17_Chr8g0386711 | 28.070 | 171 | 120 | 1 | 1 | 168 | 1 | 171 | 3.21e-14 | 69.3 |
| Msa0460620 | MtrunA17_Chr2g0276951 | 30.233 | 172 | 107 | 6 | 40 | 208 | 42 | 203 | 1.47e-13 | 68.6 |
| Msa0460620 | MtrunA17_Chr3g0095811 | 61.224 | 49 | 18 | 1 | 1 | 49 | 1 | 48 | 4.45e-13 | 62.0 |
| Msa0460620 | MtrunA17_Chr0c12g0493651 | 33.333 | 132 | 74 | 4 | 40 | 167 | 40 | 161 | 2.80e-12 | 65.1 |
| Msa0460620 | MtrunA17_Chr1g0198101 | 46.032 | 63 | 33 | 1 | 146 | 208 | 1 | 62 | 3.50e-12 | 59.7 |
| Msa0460620 | MtrunA17_Chr3g0102331 | 27.059 | 170 | 115 | 5 | 40 | 208 | 40 | 201 | 5.44e-12 | 63.9 |
| Msa0460620 | MtrunA17_Chr4g0076691 | 28.358 | 201 | 125 | 5 | 5 | 202 | 18 | 202 | 1.03e-11 | 62.0 |
| Msa0460620 | MtrunA17_Chr4g0076681 | 34.906 | 106 | 68 | 1 | 5 | 110 | 18 | 122 | 1.83e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460620 | AT3G03190.1 | 58.962 | 212 | 87 | 0 | 1 | 212 | 1 | 212 | 1.76e-93 | 272 |
| Msa0460620 | AT5G17220.1 | 55.189 | 212 | 95 | 0 | 1 | 212 | 1 | 212 | 2.31e-89 | 262 |
| Msa0460620 | AT2G30870.1 | 51.923 | 208 | 99 | 1 | 1 | 208 | 1 | 207 | 3.42e-75 | 226 |
| Msa0460620 | AT2G30860.1 | 51.208 | 207 | 100 | 1 | 1 | 207 | 1 | 206 | 2.58e-72 | 219 |
| Msa0460620 | AT3G62760.1 | 43.810 | 210 | 116 | 2 | 1 | 209 | 1 | 209 | 2.58e-57 | 181 |
| Msa0460620 | AT1G02930.2 | 43.204 | 206 | 115 | 2 | 3 | 208 | 4 | 207 | 1.37e-54 | 173 |
| Msa0460620 | AT1G02930.1 | 43.204 | 206 | 115 | 2 | 3 | 208 | 4 | 207 | 1.37e-54 | 173 |
| Msa0460620 | AT1G02920.1 | 43.689 | 206 | 115 | 1 | 3 | 208 | 4 | 208 | 4.58e-54 | 172 |
| Msa0460620 | AT2G47730.2 | 42.788 | 208 | 117 | 2 | 5 | 211 | 54 | 260 | 8.07e-52 | 168 |
| Msa0460620 | AT2G47730.1 | 42.788 | 208 | 117 | 2 | 5 | 211 | 54 | 260 | 8.07e-52 | 168 |
| Msa0460620 | AT4G02520.1 | 41.429 | 210 | 119 | 2 | 3 | 209 | 4 | 212 | 1.41e-51 | 166 |
| Msa0460620 | AT2G02930.1 | 41.627 | 209 | 118 | 2 | 3 | 208 | 4 | 211 | 2.56e-50 | 162 |
| Msa0460620 | AT1G49860.1 | 44.503 | 191 | 103 | 2 | 20 | 207 | 22 | 212 | 1.26e-49 | 162 |
| Msa0460620 | AT2G30860.2 | 50.323 | 155 | 76 | 1 | 1 | 155 | 1 | 154 | 3.07e-49 | 158 |
| Msa0460620 | AT1G02950.3 | 42.647 | 204 | 115 | 2 | 4 | 206 | 26 | 228 | 4.47e-49 | 160 |
| Msa0460620 | AT1G02950.1 | 42.647 | 204 | 115 | 2 | 4 | 206 | 26 | 228 | 4.47e-49 | 160 |
| Msa0460620 | AT1G02950.2 | 42.647 | 204 | 115 | 2 | 4 | 206 | 28 | 230 | 4.68e-49 | 160 |
| Msa0460620 | AT1G02950.5 | 42.647 | 204 | 115 | 2 | 4 | 206 | 38 | 240 | 6.61e-49 | 160 |
| Msa0460620 | AT1G02940.4 | 39.024 | 205 | 123 | 2 | 4 | 207 | 40 | 243 | 4.59e-47 | 155 |
| Msa0460620 | AT1G02940.1 | 39.024 | 205 | 123 | 2 | 4 | 207 | 40 | 243 | 4.59e-47 | 155 |
| Msa0460620 | AT1G02940.3 | 39.024 | 205 | 123 | 2 | 4 | 207 | 53 | 256 | 5.99e-47 | 155 |
| Msa0460620 | AT1G02940.2 | 39.024 | 205 | 123 | 2 | 4 | 207 | 65 | 268 | 7.48e-47 | 156 |
| Msa0460620 | AT1G02950.4 | 40.278 | 144 | 84 | 2 | 64 | 206 | 60 | 202 | 5.26e-28 | 105 |
| Msa0460620 | AT1G77290.3 | 24.051 | 237 | 148 | 6 | 3 | 208 | 1 | 236 | 9.30e-15 | 71.2 |
| Msa0460620 | AT1G77290.1 | 24.051 | 237 | 148 | 6 | 3 | 208 | 1 | 236 | 9.30e-15 | 71.2 |
| Msa0460620 | AT1G77290.2 | 24.051 | 237 | 148 | 6 | 3 | 208 | 1 | 236 | 9.30e-15 | 71.2 |
| Msa0460620 | AT5G41240.1 | 28.708 | 209 | 142 | 3 | 1 | 204 | 1 | 207 | 2.97e-14 | 71.2 |
| Msa0460620 | AT1G09640.2 | 28.796 | 191 | 123 | 4 | 27 | 211 | 22 | 205 | 3.78e-14 | 69.7 |
| Msa0460620 | AT5G41210.1 | 27.228 | 202 | 142 | 2 | 1 | 197 | 2 | 203 | 2.90e-13 | 67.0 |
| Msa0460620 | AT1G57720.1 | 27.907 | 172 | 112 | 4 | 40 | 208 | 40 | 202 | 3.40e-13 | 68.2 |
| Msa0460620 | AT1G57720.2 | 27.907 | 172 | 112 | 4 | 40 | 208 | 40 | 202 | 3.40e-13 | 68.2 |
| Msa0460620 | AT1G09640.1 | 28.191 | 188 | 122 | 4 | 27 | 208 | 22 | 202 | 8.32e-13 | 67.0 |
| Msa0460620 | AT5G41220.1 | 27.228 | 202 | 142 | 2 | 1 | 197 | 1 | 202 | 1.22e-12 | 66.6 |
Find 51 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATGGTGGTTAAAGTTTA+TGG | 0.134206 | 3_3:+58097504 | Msa0460620:exon |
| TCTTATTGAGGCAGCAAAAT+TGG | 0.186477 | 3_3:+58099714 | Msa0460620:CDS |
| CTTAGTCATCTTCCTGGAAT+TGG | 0.292656 | 3_3:+58099688 | Msa0460620:CDS |
| GATGGTGATTTCAGACTCTT+TGG | 0.307785 | 3_3:+58098662 | Msa0460620:CDS |
| GCTGATCTTAGTCATCTTCC+TGG | 0.315615 | 3_3:+58099682 | Msa0460620:CDS |
| GTGCATATTGATCTTGATAA+AGG | 0.322979 | 3_3:+58097597 | Msa0460620:CDS |
| TCTAAAAGCACTTATCTTGC+TGG | 0.332817 | 3_3:+58099643 | Msa0460620:CDS |
| ACTAAAGAGAAGGGGAAATA+TGG | 0.336447 | 3_3:+58097488 | Msa0460620:exon |
| TTGGAAGAAGTTGAAGGAAT+TGG | 0.377135 | 3_3:+58099801 | Msa0460620:CDS |
| AAATCACCATCCTCTACAAC+TGG | 0.411376 | 3_3:-58098650 | None:intergenic |
| CTTATTGAGGCAGCAAAATT+GGG | 0.415280 | 3_3:+58099715 | Msa0460620:CDS |
| CTGTGATTTGTGTAGAATCA+AGG | 0.424395 | 3_3:+58099371 | Msa0460620:intron |
| TCCTTCAACTTCTTCCAAGC+TGG | 0.444171 | 3_3:-58099796 | None:intergenic |
| TCAATAAGATGTCCAATTCC+AGG | 0.451011 | 3_3:-58099700 | None:intergenic |
| CTTCTAAAGTTGTGCCAAGT+AGG | 0.455796 | 3_3:-58099441 | None:intergenic |
| AAAGTTGTGCCAAGTAGGTC+AGG | 0.467376 | 3_3:-58099436 | None:intergenic |
| ACCTGAGTTCCTTCTCCTCC+AGG | 0.473534 | 3_3:+58097632 | Msa0460620:CDS |
| AGAAAGCTGTGGTGGATCAA+TGG | 0.498575 | 3_3:+58099464 | Msa0460620:CDS |
| TTTCAAGTAACTAAAGAGAA+GGG | 0.498682 | 3_3:+58097479 | Msa0460620:five_prime_UTR |
| AAATTTCTAGTAGGCCAGCT+TGG | 0.510403 | 3_3:+58099782 | Msa0460620:CDS |
| TGCTGGTGATAAGTTCACTT+TGG | 0.510705 | 3_3:+58099660 | Msa0460620:CDS |
| GGTGGGAGAAAATTTCTAGT+AGG | 0.512715 | 3_3:+58099773 | Msa0460620:CDS |
| TAGAATCAAGGGCTATTGTA+AGG | 0.513820 | 3_3:+58099383 | Msa0460620:intron |
| AAGTTGAAGGAATTGGCATA+AGG | 0.515297 | 3_3:+58099808 | Msa0460620:CDS |
| ACAACTGGAACTTGACCAAA+GGG | 0.534533 | 3_3:-58098635 | None:intergenic |
| TATATACTACCTGGAGGAGA+AGG | 0.540663 | 3_3:-58097641 | None:intergenic |
| TGGTCAAGTTCCAGTTGTAG+AGG | 0.543144 | 3_3:+58098640 | Msa0460620:CDS |
| GACCGTGGTCCTGACCTACT+TGG | 0.545257 | 3_3:+58099427 | Msa0460620:CDS |
| TGAGCTATAGTTATGTCTCC+AGG | 0.558174 | 3_3:-58099568 | None:intergenic |
| TGTGATTTGTGTAGAATCAA+GGG | 0.558216 | 3_3:+58099372 | Msa0460620:intron |
| CAAGTTCCAGTTGTAGAGGA+TGG | 0.575857 | 3_3:+58098644 | Msa0460620:CDS |
| GCCAGCTTGGAAGAAGTTGA+AGG | 0.576600 | 3_3:+58099795 | Msa0460620:CDS |
| AGAGGAAGAATGTGAATGCT+TGG | 0.577760 | 3_3:+58099752 | Msa0460620:CDS |
| TTCAAGTAACTAAAGAGAAG+GGG | 0.585069 | 3_3:+58097480 | Msa0460620:five_prime_UTR |
| TTTAGAAGAGAAAGCTGTGG+TGG | 0.591968 | 3_3:+58099456 | Msa0460620:CDS |
| TGGAATTGGACATCTTATTG+AGG | 0.594707 | 3_3:+58099702 | Msa0460620:CDS |
| GAAGAATGTGAATGCTTGGT+GGG | 0.598085 | 3_3:+58099756 | Msa0460620:CDS |
| GGAAGAATGTGAATGCTTGG+TGG | 0.600496 | 3_3:+58099755 | Msa0460620:CDS |
| AAAGAGAAGGGGAAATATGG+TGG | 0.600841 | 3_3:+58097491 | Msa0460620:exon |
| TAGTTCTGAACAGAAGCTAG+AGG | 0.602484 | 3_3:+58099591 | Msa0460620:CDS |
| TACAACTGGAACTTGACCAA+AGG | 0.607365 | 3_3:-58098636 | None:intergenic |
| TGGGACATTTGATTAGTGAG+AGG | 0.608261 | 3_3:+58099734 | Msa0460620:CDS |
| TAATGCAGCATGTCCTCAGA+GGG | 0.631190 | 3_3:+58097533 | Msa0460620:CDS |
| ACCTGGAGGAGAAGGAACTC+AGG | 0.631815 | 3_3:-58097633 | None:intergenic |
| AGCATGTCCTCAGAGGGTGA+TGG | 0.631871 | 3_3:+58097539 | Msa0460620:CDS |
| AGGCAAGCCATCACCCTCTG+AGG | 0.647961 | 3_3:-58097546 | None:intergenic |
| TTAATGCAGCATGTCCTCAG+AGG | 0.685889 | 3_3:+58097532 | Msa0460620:CDS |
| AACTTTAGAAGAGAAAGCTG+TGG | 0.697603 | 3_3:+58099453 | Msa0460620:CDS |
| TGCCAAGTAGGTCAGGACCA+CGG | 0.707978 | 3_3:-58099429 | None:intergenic |
| GCAGCAAAGTATGCAGACCG+TGG | 0.728704 | 3_3:+58099412 | Msa0460620:CDS |
| TGCTTGATGTGTATGAACGT+AGG | 0.749850 | 3_3:+58099617 | Msa0460620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATTACAAAAATTTTG+GGG | - | chr3_3:58098157-58098176 | None:intergenic | 10.0% |
| !! | GTTTATATAATAAATTAAGA+GGG | - | chr3_3:58098188-58098207 | None:intergenic | 10.0% |
| !! | AAAAATTTCACAATTTATAA+GGG | - | chr3_3:58098210-58098229 | None:intergenic | 10.0% |
| !! | AAAAAATTTCACAATTTATA+AGG | - | chr3_3:58098211-58098230 | None:intergenic | 10.0% |
| !!! | AAAAAATTACAAAAATTTTG+GGG | - | chr3_3:58098157-58098176 | None:intergenic | 10.0% |
| !! | GTTTATATAATAAATTAAGA+GGG | - | chr3_3:58098188-58098207 | None:intergenic | 10.0% |
| !! | AAAAATTTCACAATTTATAA+GGG | - | chr3_3:58098210-58098229 | None:intergenic | 10.0% |
| !! | AAAAAATTTCACAATTTATA+AGG | - | chr3_3:58098211-58098230 | None:intergenic | 10.0% |
| !!! | AAAATATAGTTGAGATATTT+TGG | + | chr3_3:58097766-58097785 | Msa0460620:intron | 15.0% |
| !!! | TTCTCCTTTTTTTTTTATAA+AGG | + | chr3_3:58097837-58097856 | Msa0460620:intron | 15.0% |
| !!! | AGATTTATTATATTGATTGA+TGG | + | chr3_3:58097997-58098016 | Msa0460620:intron | 15.0% |
| !! | GGTTTATATAATAAATTAAG+AGG | - | chr3_3:58098189-58098208 | None:intergenic | 15.0% |
| !! | CTAGAATTATTATAAAGTTT+GGG | - | chr3_3:58098300-58098319 | None:intergenic | 15.0% |
| !!! | TTTTCATTATGATAATTGTT+TGG | - | chr3_3:58099089-58099108 | None:intergenic | 15.0% |
| !!! | TTTAATTTTCATAGTTTCAT+TGG | + | chr3_3:58099181-58099200 | Msa0460620:intron | 15.0% |
| !!! | GTTTGTATTTTATAATTCAT+GGG | + | chr3_3:58099203-58099222 | Msa0460620:intron | 15.0% |
| !!! | GAGCTTTTAAATATATTATT+AGG | - | chr3_3:58099273-58099292 | None:intergenic | 15.0% |
| !!! | AAAATATAGTTGAGATATTT+TGG | + | chr3_3:58097766-58097785 | Msa0460620:intron | 15.0% |
| !!! | TTCTCCTTTTTTTTTTATAA+AGG | + | chr3_3:58097837-58097856 | Msa0460620:intron | 15.0% |
| !!! | AGATTTATTATATTGATTGA+TGG | + | chr3_3:58097997-58098016 | Msa0460620:intron | 15.0% |
| !! | GGTTTATATAATAAATTAAG+AGG | - | chr3_3:58098189-58098208 | None:intergenic | 15.0% |
| !! | CTAGAATTATTATAAAGTTT+GGG | - | chr3_3:58098300-58098319 | None:intergenic | 15.0% |
| !!! | TTTTCATTATGATAATTGTT+TGG | - | chr3_3:58099089-58099108 | None:intergenic | 15.0% |
| !!! | TTTAATTTTCATAGTTTCAT+TGG | + | chr3_3:58099181-58099200 | Msa0460620:intron | 15.0% |
| !!! | GTTTGTATTTTATAATTCAT+GGG | + | chr3_3:58099203-58099222 | Msa0460620:intron | 15.0% |
| !!! | GAGCTTTTAAATATATTATT+AGG | - | chr3_3:58099273-58099292 | None:intergenic | 15.0% |
| !! | TTTATAAACTATATACTACC+TGG | - | chr3_3:58097653-58097672 | None:intergenic | 20.0% |
| !!! | GAAAAATACAAAAGTATCTA+GGG | - | chr3_3:58097684-58097703 | None:intergenic | 20.0% |
| !!! | AGAAAAATACAAAAGTATCT+AGG | - | chr3_3:58097685-58097704 | None:intergenic | 20.0% |
| !! | CACACCTTTATAAAAAAAAA+AGG | - | chr3_3:58097844-58097863 | None:intergenic | 20.0% |
| !! | GATTCTTAAATTTGTATGTA+GGG | - | chr3_3:58097869-58097888 | None:intergenic | 20.0% |
| !! | AGATTCTTAAATTTGTATGT+AGG | - | chr3_3:58097870-58097889 | None:intergenic | 20.0% |
| !! | AGTGTTAATTAATTCAAAGT+GGG | + | chr3_3:58097954-58097973 | Msa0460620:intron | 20.0% |
| !! | GCTAGAATTATTATAAAGTT+TGG | - | chr3_3:58098301-58098320 | None:intergenic | 20.0% |
| !! | CACAAAATATTTACTATGTT+GGG | - | chr3_3:58098336-58098355 | None:intergenic | 20.0% |
| !! | AAGAAAAATTGATTACATGA+TGG | - | chr3_3:58098608-58098627 | None:intergenic | 20.0% |
| !! | TTGAAGGTAAGAAATAATTA+AGG | - | chr3_3:58098795-58098814 | None:intergenic | 20.0% |
| !!! | GGTTTGTATTTTATAATTCA+TGG | + | chr3_3:58099202-58099221 | Msa0460620:intron | 20.0% |
| !!! | AGTAACATGTTATTTTTTCT+AGG | + | chr3_3:58099317-58099336 | Msa0460620:intron | 20.0% |
| !!! | GTAACATGTTATTTTTTCTA+GGG | + | chr3_3:58099318-58099337 | Msa0460620:intron | 20.0% |
| !! | TTTATAAACTATATACTACC+TGG | - | chr3_3:58097653-58097672 | None:intergenic | 20.0% |
| !!! | GAAAAATACAAAAGTATCTA+GGG | - | chr3_3:58097684-58097703 | None:intergenic | 20.0% |
| !!! | AGAAAAATACAAAAGTATCT+AGG | - | chr3_3:58097685-58097704 | None:intergenic | 20.0% |
| !! | CACACCTTTATAAAAAAAAA+AGG | - | chr3_3:58097844-58097863 | None:intergenic | 20.0% |
| !! | GATTCTTAAATTTGTATGTA+GGG | - | chr3_3:58097869-58097888 | None:intergenic | 20.0% |
| !! | AGATTCTTAAATTTGTATGT+AGG | - | chr3_3:58097870-58097889 | None:intergenic | 20.0% |
| !! | AGTGTTAATTAATTCAAAGT+GGG | + | chr3_3:58097954-58097973 | Msa0460620:intron | 20.0% |
| !! | GCTAGAATTATTATAAAGTT+TGG | - | chr3_3:58098301-58098320 | None:intergenic | 20.0% |
| !! | CACAAAATATTTACTATGTT+GGG | - | chr3_3:58098336-58098355 | None:intergenic | 20.0% |
| !! | AAGAAAAATTGATTACATGA+TGG | - | chr3_3:58098608-58098627 | None:intergenic | 20.0% |
| !! | TTGAAGGTAAGAAATAATTA+AGG | - | chr3_3:58098795-58098814 | None:intergenic | 20.0% |
| !!! | GGTTTGTATTTTATAATTCA+TGG | + | chr3_3:58099202-58099221 | Msa0460620:intron | 20.0% |
| !!! | AGTAACATGTTATTTTTTCT+AGG | + | chr3_3:58099317-58099336 | Msa0460620:intron | 20.0% |
| !!! | GTAACATGTTATTTTTTCTA+GGG | + | chr3_3:58099318-58099337 | Msa0460620:intron | 20.0% |
| !!! | TTTTCAAGTAACTAAAGAGA+AGG | + | chr3_3:58097478-58097497 | Msa0460620:five_prime_UTR | 25.0% |
| !! | TTTCAAGTAACTAAAGAGAA+GGG | + | chr3_3:58097479-58097498 | Msa0460620:five_prime_UTR | 25.0% |
| ! | AATATGGTGGTTAAAGTTTA+TGG | + | chr3_3:58097504-58097523 | Msa0460620:exon | 25.0% |
| !!! | TTGAGATATTTTGGTTTGTT+GGG | + | chr3_3:58097775-58097794 | Msa0460620:intron | 25.0% |
| ! | GAGTGTTAATTAATTCAAAG+TGG | + | chr3_3:58097953-58097972 | Msa0460620:intron | 25.0% |
| ! | TTCTTTAACGAAAACAATCA+TGG | - | chr3_3:58098032-58098051 | None:intergenic | 25.0% |
| ! | TTTAAAAATGTCCATCCAAA+GGG | + | chr3_3:58098105-58098124 | Msa0460620:intron | 25.0% |
| ! | AATTTGCAACACATTTATAG+AGG | - | chr3_3:58098271-58098290 | None:intergenic | 25.0% |
| ! | GCACAAAATATTTACTATGT+TGG | - | chr3_3:58098337-58098356 | None:intergenic | 25.0% |
| ! | TATTGGTGGAATATAATTGA+AGG | - | chr3_3:58098811-58098830 | None:intergenic | 25.0% |
| !!! | AATATGTGGTGTTGATTTAT+TGG | - | chr3_3:58098828-58098847 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGAGTGTCATGTT+AGG | + | chr3_3:58099045-58099064 | Msa0460620:intron | 25.0% |
| !! | CTGTTAGTTTATTTAAAGAG+AGG | + | chr3_3:58099247-58099266 | Msa0460620:intron | 25.0% |
| ! | GCAAAATAAAGTAACATGTT+AGG | + | chr3_3:58099340-58099359 | Msa0460620:intron | 25.0% |
| ! | TCTTGTAATTCTACCAAAAA+TGG | + | chr3_3:58099540-58099559 | Msa0460620:CDS | 25.0% |
| ! | CTTGTAATTCTACCAAAAAT+GGG | + | chr3_3:58099541-58099560 | Msa0460620:CDS | 25.0% |
| !!! | TTTTCAAGTAACTAAAGAGA+AGG | + | chr3_3:58097478-58097497 | Msa0460620:five_prime_UTR | 25.0% |
| !! | TTTCAAGTAACTAAAGAGAA+GGG | + | chr3_3:58097479-58097498 | Msa0460620:five_prime_UTR | 25.0% |
| ! | AATATGGTGGTTAAAGTTTA+TGG | + | chr3_3:58097504-58097523 | Msa0460620:exon | 25.0% |
| !!! | TTGAGATATTTTGGTTTGTT+GGG | + | chr3_3:58097775-58097794 | Msa0460620:intron | 25.0% |
| ! | GAGTGTTAATTAATTCAAAG+TGG | + | chr3_3:58097953-58097972 | Msa0460620:intron | 25.0% |
| ! | TTCTTTAACGAAAACAATCA+TGG | - | chr3_3:58098032-58098051 | None:intergenic | 25.0% |
| ! | TTTAAAAATGTCCATCCAAA+GGG | + | chr3_3:58098105-58098124 | Msa0460620:intron | 25.0% |
| ! | AATTTGCAACACATTTATAG+AGG | - | chr3_3:58098271-58098290 | None:intergenic | 25.0% |
| ! | GCACAAAATATTTACTATGT+TGG | - | chr3_3:58098337-58098356 | None:intergenic | 25.0% |
| ! | TATTGGTGGAATATAATTGA+AGG | - | chr3_3:58098811-58098830 | None:intergenic | 25.0% |
| !!! | AATATGTGGTGTTGATTTAT+TGG | - | chr3_3:58098828-58098847 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGAGTGTCATGTT+AGG | + | chr3_3:58099045-58099064 | Msa0460620:intron | 25.0% |
| !! | CTGTTAGTTTATTTAAAGAG+AGG | + | chr3_3:58099247-58099266 | Msa0460620:intron | 25.0% |
| ! | GCAAAATAAAGTAACATGTT+AGG | + | chr3_3:58099340-58099359 | Msa0460620:intron | 25.0% |
| ! | TCTTGTAATTCTACCAAAAA+TGG | + | chr3_3:58099540-58099559 | Msa0460620:CDS | 25.0% |
| ! | CTTGTAATTCTACCAAAAAT+GGG | + | chr3_3:58099541-58099560 | Msa0460620:CDS | 25.0% |
| TTCAAGTAACTAAAGAGAAG+GGG | + | chr3_3:58097480-58097499 | Msa0460620:five_prime_UTR | 30.0% | |
| ! | ATTCTACCTCTTTTTCTAAG+AGG | - | chr3_3:58097569-58097588 | None:intergenic | 30.0% |
| GTGCATATTGATCTTGATAA+AGG | + | chr3_3:58097597-58097616 | Msa0460620:CDS | 30.0% | |
| ATAAACTATATACTACCTGG+AGG | - | chr3_3:58097650-58097669 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTCGTAAATGAT+AGG | + | chr3_3:58097727-58097746 | Msa0460620:intron | 30.0% |
| !!! | GTTGAGATATTTTGGTTTGT+TGG | + | chr3_3:58097774-58097793 | Msa0460620:intron | 30.0% |
| TGAAGAGAAATGAGTAATTG+TGG | + | chr3_3:58098082-58098101 | Msa0460620:intron | 30.0% | |
| GTTTAAAAATGTCCATCCAA+AGG | + | chr3_3:58098104-58098123 | Msa0460620:intron | 30.0% | |
| AATATCTCGTACAGCTAAAA+TGG | - | chr3_3:58098369-58098388 | None:intergenic | 30.0% | |
| CGAGTAGAATCAAAGATATA+TGG | - | chr3_3:58098556-58098575 | None:intergenic | 30.0% | |
| TCTCTCTTGGTTTAAATATG+TGG | - | chr3_3:58098842-58098861 | None:intergenic | 30.0% | |
| !! | TAAAGAGTATCGATTAGGTA+CGG | - | chr3_3:58098904-58098923 | None:intergenic | 30.0% |
| !! | GACTTTAAAGAGTATCGATT+AGG | - | chr3_3:58098909-58098928 | None:intergenic | 30.0% |
| TAATTCATGGGTATCCATAT+TGG | + | chr3_3:58099215-58099234 | Msa0460620:intron | 30.0% | |
| AACAGATTAACAAGCCAATA+TGG | - | chr3_3:58099232-58099251 | None:intergenic | 30.0% | |
| ! | TGTGATTTGTGTAGAATCAA+GGG | + | chr3_3:58099372-58099391 | Msa0460620:intron | 30.0% |
| TTCAAGTAACTAAAGAGAAG+GGG | + | chr3_3:58097480-58097499 | Msa0460620:five_prime_UTR | 30.0% | |
| ! | ATTCTACCTCTTTTTCTAAG+AGG | - | chr3_3:58097569-58097588 | None:intergenic | 30.0% |
| GTGCATATTGATCTTGATAA+AGG | + | chr3_3:58097597-58097616 | Msa0460620:CDS | 30.0% | |
| ATAAACTATATACTACCTGG+AGG | - | chr3_3:58097650-58097669 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTCGTAAATGAT+AGG | + | chr3_3:58097727-58097746 | Msa0460620:intron | 30.0% |
| !!! | GTTGAGATATTTTGGTTTGT+TGG | + | chr3_3:58097774-58097793 | Msa0460620:intron | 30.0% |
| TGAAGAGAAATGAGTAATTG+TGG | + | chr3_3:58098082-58098101 | Msa0460620:intron | 30.0% | |
| GTTTAAAAATGTCCATCCAA+AGG | + | chr3_3:58098104-58098123 | Msa0460620:intron | 30.0% | |
| AATATCTCGTACAGCTAAAA+TGG | - | chr3_3:58098369-58098388 | None:intergenic | 30.0% | |
| CGAGTAGAATCAAAGATATA+TGG | - | chr3_3:58098556-58098575 | None:intergenic | 30.0% | |
| TCTCTCTTGGTTTAAATATG+TGG | - | chr3_3:58098842-58098861 | None:intergenic | 30.0% | |
| !! | TAAAGAGTATCGATTAGGTA+CGG | - | chr3_3:58098904-58098923 | None:intergenic | 30.0% |
| !! | GACTTTAAAGAGTATCGATT+AGG | - | chr3_3:58098909-58098928 | None:intergenic | 30.0% |
| TAATTCATGGGTATCCATAT+TGG | + | chr3_3:58099215-58099234 | Msa0460620:intron | 30.0% | |
| AACAGATTAACAAGCCAATA+TGG | - | chr3_3:58099232-58099251 | None:intergenic | 30.0% | |
| ! | TGTGATTTGTGTAGAATCAA+GGG | + | chr3_3:58099372-58099391 | Msa0460620:intron | 30.0% |
| ACTAAAGAGAAGGGGAAATA+TGG | + | chr3_3:58097488-58097507 | Msa0460620:exon | 35.0% | |
| !!! | AGATATTTTGGTTTGTTGGG+TGG | + | chr3_3:58097778-58097797 | Msa0460620:intron | 35.0% |
| CATTTCTCTTCACTTAGTGT+AGG | - | chr3_3:58098074-58098093 | None:intergenic | 35.0% | |
| !!! | TTACAAAAATTTTGGGGCAG+AGG | - | chr3_3:58098151-58098170 | None:intergenic | 35.0% |
| ATTTACTATGTTGGGTGTAG+TGG | - | chr3_3:58098328-58098347 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTTGCAGCCCTT+TGG | + | chr3_3:58098620-58098639 | Msa0460620:intron | 35.0% |
| ACTCTTTGGTGAGAATTTGT+TGG | + | chr3_3:58098676-58098695 | Msa0460620:intron | 35.0% | |
| !! | ATGTGGTGTTGATTTATTGG+TGG | - | chr3_3:58098825-58098844 | None:intergenic | 35.0% |
| !! | AAAGAGTATCGATTAGGTAC+GGG | - | chr3_3:58098903-58098922 | None:intergenic | 35.0% |
| ATATTTGCGTGAGCTTTCTA+AGG | - | chr3_3:58099117-58099136 | None:intergenic | 35.0% | |
| ! | CTGTGATTTGTGTAGAATCA+AGG | + | chr3_3:58099371-58099390 | Msa0460620:intron | 35.0% |
| TAGAATCAAGGGCTATTGTA+AGG | + | chr3_3:58099383-58099402 | Msa0460620:intron | 35.0% | |
| ! | AACTTTAGAAGAGAAAGCTG+TGG | + | chr3_3:58099453-58099472 | Msa0460620:CDS | 35.0% |
| !! | TCTAAAAGCACTTATCTTGC+TGG | + | chr3_3:58099643-58099662 | Msa0460620:CDS | 35.0% |
| TCAATAAGATGTCCAATTCC+AGG | - | chr3_3:58099703-58099722 | None:intergenic | 35.0% | |
| TGGAATTGGACATCTTATTG+AGG | + | chr3_3:58099702-58099721 | Msa0460620:CDS | 35.0% | |
| TCTTATTGAGGCAGCAAAAT+TGG | + | chr3_3:58099714-58099733 | Msa0460620:CDS | 35.0% | |
| CTTATTGAGGCAGCAAAATT+GGG | + | chr3_3:58099715-58099734 | Msa0460620:CDS | 35.0% | |
| TTGGAAGAAGTTGAAGGAAT+TGG | + | chr3_3:58099801-58099820 | Msa0460620:CDS | 35.0% | |
| AAGTTGAAGGAATTGGCATA+AGG | + | chr3_3:58099808-58099827 | Msa0460620:CDS | 35.0% | |
| ACTAAAGAGAAGGGGAAATA+TGG | + | chr3_3:58097488-58097507 | Msa0460620:exon | 35.0% | |
| !!! | AGATATTTTGGTTTGTTGGG+TGG | + | chr3_3:58097778-58097797 | Msa0460620:intron | 35.0% |
| CATTTCTCTTCACTTAGTGT+AGG | - | chr3_3:58098074-58098093 | None:intergenic | 35.0% | |
| !!! | TTACAAAAATTTTGGGGCAG+AGG | - | chr3_3:58098151-58098170 | None:intergenic | 35.0% |
| ATTTACTATGTTGGGTGTAG+TGG | - | chr3_3:58098328-58098347 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTTGCAGCCCTT+TGG | + | chr3_3:58098620-58098639 | Msa0460620:intron | 35.0% |
| ACTCTTTGGTGAGAATTTGT+TGG | + | chr3_3:58098676-58098695 | Msa0460620:intron | 35.0% | |
| !! | ATGTGGTGTTGATTTATTGG+TGG | - | chr3_3:58098825-58098844 | None:intergenic | 35.0% |
| !! | AAAGAGTATCGATTAGGTAC+GGG | - | chr3_3:58098903-58098922 | None:intergenic | 35.0% |
| ATATTTGCGTGAGCTTTCTA+AGG | - | chr3_3:58099117-58099136 | None:intergenic | 35.0% | |
| ! | CTGTGATTTGTGTAGAATCA+AGG | + | chr3_3:58099371-58099390 | Msa0460620:intron | 35.0% |
| TAGAATCAAGGGCTATTGTA+AGG | + | chr3_3:58099383-58099402 | Msa0460620:intron | 35.0% | |
| ! | AACTTTAGAAGAGAAAGCTG+TGG | + | chr3_3:58099453-58099472 | Msa0460620:CDS | 35.0% |
| !! | TCTAAAAGCACTTATCTTGC+TGG | + | chr3_3:58099643-58099662 | Msa0460620:CDS | 35.0% |
| TCAATAAGATGTCCAATTCC+AGG | - | chr3_3:58099703-58099722 | None:intergenic | 35.0% | |
| TGGAATTGGACATCTTATTG+AGG | + | chr3_3:58099702-58099721 | Msa0460620:CDS | 35.0% | |
| TCTTATTGAGGCAGCAAAAT+TGG | + | chr3_3:58099714-58099733 | Msa0460620:CDS | 35.0% | |
| CTTATTGAGGCAGCAAAATT+GGG | + | chr3_3:58099715-58099734 | Msa0460620:CDS | 35.0% | |
| TTGGAAGAAGTTGAAGGAAT+TGG | + | chr3_3:58099801-58099820 | Msa0460620:CDS | 35.0% | |
| AAAGAGAAGGGGAAATATGG+TGG | + | chr3_3:58097491-58097510 | Msa0460620:exon | 40.0% | |
| TATATACTACCTGGAGGAGA+AGG | - | chr3_3:58097644-58097663 | None:intergenic | 40.0% | |
| AAAAATGTCCATCCAAAGGG+CGG | + | chr3_3:58098108-58098127 | Msa0460620:intron | 40.0% | |
| ACAACTGGAACTTGACCAAA+GGG | - | chr3_3:58098638-58098657 | None:intergenic | 40.0% | |
| TACAACTGGAACTTGACCAA+AGG | - | chr3_3:58098639-58098658 | None:intergenic | 40.0% | |
| AAATCACCATCCTCTACAAC+TGG | - | chr3_3:58098653-58098672 | None:intergenic | 40.0% | |
| GATGGTGATTTCAGACTCTT+TGG | + | chr3_3:58098662-58098681 | Msa0460620:CDS | 40.0% | |
| GACAGACATTACGTCATGTT+AGG | + | chr3_3:58099015-58099034 | Msa0460620:intron | 40.0% | |
| !! | CTTCTAAAGTTGTGCCAAGT+AGG | - | chr3_3:58099444-58099463 | None:intergenic | 40.0% |
| TTTAGAAGAGAAAGCTGTGG+TGG | + | chr3_3:58099456-58099475 | Msa0460620:CDS | 40.0% | |
| TGAGCTATAGTTATGTCTCC+AGG | - | chr3_3:58099571-58099590 | None:intergenic | 40.0% | |
| !! | TAGTTCTGAACAGAAGCTAG+AGG | + | chr3_3:58099591-58099610 | Msa0460620:CDS | 40.0% |
| TGCTTGATGTGTATGAACGT+AGG | + | chr3_3:58099617-58099636 | Msa0460620:CDS | 40.0% | |
| TGCTGGTGATAAGTTCACTT+TGG | + | chr3_3:58099660-58099679 | Msa0460620:CDS | 40.0% | |
| CTTAGTCATCTTCCTGGAAT+TGG | + | chr3_3:58099688-58099707 | Msa0460620:CDS | 40.0% | |
| TGGGACATTTGATTAGTGAG+AGG | + | chr3_3:58099734-58099753 | Msa0460620:CDS | 40.0% | |
| AGAGGAAGAATGTGAATGCT+TGG | + | chr3_3:58099752-58099771 | Msa0460620:CDS | 40.0% | |
| GAAGAATGTGAATGCTTGGT+GGG | + | chr3_3:58099756-58099775 | Msa0460620:CDS | 40.0% | |
| !! | GGTGGGAGAAAATTTCTAGT+AGG | + | chr3_3:58099773-58099792 | Msa0460620:CDS | 40.0% |
| !! | AAATTTCTAGTAGGCCAGCT+TGG | + | chr3_3:58099782-58099801 | Msa0460620:CDS | 40.0% |
| AAAGAGAAGGGGAAATATGG+TGG | + | chr3_3:58097491-58097510 | Msa0460620:exon | 40.0% | |
| TATATACTACCTGGAGGAGA+AGG | - | chr3_3:58097644-58097663 | None:intergenic | 40.0% | |
| AAAAATGTCCATCCAAAGGG+CGG | + | chr3_3:58098108-58098127 | Msa0460620:intron | 40.0% | |
| ACAACTGGAACTTGACCAAA+GGG | - | chr3_3:58098638-58098657 | None:intergenic | 40.0% | |
| TACAACTGGAACTTGACCAA+AGG | - | chr3_3:58098639-58098658 | None:intergenic | 40.0% | |
| AAATCACCATCCTCTACAAC+TGG | - | chr3_3:58098653-58098672 | None:intergenic | 40.0% | |
| GATGGTGATTTCAGACTCTT+TGG | + | chr3_3:58098662-58098681 | Msa0460620:CDS | 40.0% | |
| GACAGACATTACGTCATGTT+AGG | + | chr3_3:58099015-58099034 | Msa0460620:intron | 40.0% | |
| !! | CTTCTAAAGTTGTGCCAAGT+AGG | - | chr3_3:58099444-58099463 | None:intergenic | 40.0% |
| TTTAGAAGAGAAAGCTGTGG+TGG | + | chr3_3:58099456-58099475 | Msa0460620:CDS | 40.0% | |
| TGAGCTATAGTTATGTCTCC+AGG | - | chr3_3:58099571-58099590 | None:intergenic | 40.0% | |
| !! | TAGTTCTGAACAGAAGCTAG+AGG | + | chr3_3:58099591-58099610 | Msa0460620:CDS | 40.0% |
| TGCTTGATGTGTATGAACGT+AGG | + | chr3_3:58099617-58099636 | Msa0460620:CDS | 40.0% | |
| TGCTGGTGATAAGTTCACTT+TGG | + | chr3_3:58099660-58099679 | Msa0460620:CDS | 40.0% | |
| CTTAGTCATCTTCCTGGAAT+TGG | + | chr3_3:58099688-58099707 | Msa0460620:CDS | 40.0% | |
| TGGGACATTTGATTAGTGAG+AGG | + | chr3_3:58099734-58099753 | Msa0460620:CDS | 40.0% | |
| AGAGGAAGAATGTGAATGCT+TGG | + | chr3_3:58099752-58099771 | Msa0460620:CDS | 40.0% | |
| GAAGAATGTGAATGCTTGGT+GGG | + | chr3_3:58099756-58099775 | Msa0460620:CDS | 40.0% | |
| !! | GGTGGGAGAAAATTTCTAGT+AGG | + | chr3_3:58099773-58099792 | Msa0460620:CDS | 40.0% |
| !! | AAATTTCTAGTAGGCCAGCT+TGG | + | chr3_3:58099782-58099801 | Msa0460620:CDS | 40.0% |
| TTAATGCAGCATGTCCTCAG+AGG | + | chr3_3:58097532-58097551 | Msa0460620:CDS | 45.0% | |
| TAATGCAGCATGTCCTCAGA+GGG | + | chr3_3:58097533-58097552 | Msa0460620:CDS | 45.0% | |
| GGCTTGCCTCTTAGAAAAAG+AGG | + | chr3_3:58097560-58097579 | Msa0460620:CDS | 45.0% | |
| TACTATGTTGGGTGTAGTGG+CGG | - | chr3_3:58098325-58098344 | None:intergenic | 45.0% | |
| TGGTCAAGTTCCAGTTGTAG+AGG | + | chr3_3:58098640-58098659 | Msa0460620:CDS | 45.0% | |
| CAAGTTCCAGTTGTAGAGGA+TGG | + | chr3_3:58098644-58098663 | Msa0460620:CDS | 45.0% | |
| !! | AAACCAAGAGAGAGCACCAA+TGG | + | chr3_3:58098849-58098868 | Msa0460620:intron | 45.0% |
| !! | AACCAAGAGAGAGCACCAAT+GGG | + | chr3_3:58098850-58098869 | Msa0460620:intron | 45.0% |
| !! | GTATCGATTAGGTACGGGTT+TGG | - | chr3_3:58098898-58098917 | None:intergenic | 45.0% |
| AAAGTTGTGCCAAGTAGGTC+AGG | - | chr3_3:58099439-58099458 | None:intergenic | 45.0% | |
| !! | AGAAAGCTGTGGTGGATCAA+TGG | + | chr3_3:58099464-58099483 | Msa0460620:CDS | 45.0% |
| CTACCAAAAATGGGTAAGCC+TGG | + | chr3_3:58099550-58099569 | Msa0460620:CDS | 45.0% | |
| ! | TCTCCAGGCTTACCCATTTT+TGG | - | chr3_3:58099556-58099575 | None:intergenic | 45.0% |
| GCTGATCTTAGTCATCTTCC+TGG | + | chr3_3:58099682-58099701 | Msa0460620:CDS | 45.0% | |
| GGAAGAATGTGAATGCTTGG+TGG | + | chr3_3:58099755-58099774 | Msa0460620:CDS | 45.0% | |
| TCCTTCAACTTCTTCCAAGC+TGG | - | chr3_3:58099799-58099818 | None:intergenic | 45.0% | |
| TTAATGCAGCATGTCCTCAG+AGG | + | chr3_3:58097532-58097551 | Msa0460620:CDS | 45.0% | |
| TAATGCAGCATGTCCTCAGA+GGG | + | chr3_3:58097533-58097552 | Msa0460620:CDS | 45.0% | |
| GGCTTGCCTCTTAGAAAAAG+AGG | + | chr3_3:58097560-58097579 | Msa0460620:CDS | 45.0% | |
| TACTATGTTGGGTGTAGTGG+CGG | - | chr3_3:58098325-58098344 | None:intergenic | 45.0% | |
| TGGTCAAGTTCCAGTTGTAG+AGG | + | chr3_3:58098640-58098659 | Msa0460620:CDS | 45.0% | |
| CAAGTTCCAGTTGTAGAGGA+TGG | + | chr3_3:58098644-58098663 | Msa0460620:CDS | 45.0% | |
| !! | AAACCAAGAGAGAGCACCAA+TGG | + | chr3_3:58098849-58098868 | Msa0460620:intron | 45.0% |
| !! | AACCAAGAGAGAGCACCAAT+GGG | + | chr3_3:58098850-58098869 | Msa0460620:intron | 45.0% |
| !! | GTATCGATTAGGTACGGGTT+TGG | - | chr3_3:58098898-58098917 | None:intergenic | 45.0% |
| AAAGTTGTGCCAAGTAGGTC+AGG | - | chr3_3:58099439-58099458 | None:intergenic | 45.0% | |
| !! | AGAAAGCTGTGGTGGATCAA+TGG | + | chr3_3:58099464-58099483 | Msa0460620:CDS | 45.0% |
| CTACCAAAAATGGGTAAGCC+TGG | + | chr3_3:58099550-58099569 | Msa0460620:CDS | 45.0% | |
| ! | TCTCCAGGCTTACCCATTTT+TGG | - | chr3_3:58099556-58099575 | None:intergenic | 45.0% |
| GCTGATCTTAGTCATCTTCC+TGG | + | chr3_3:58099682-58099701 | Msa0460620:CDS | 45.0% | |
| GGAAGAATGTGAATGCTTGG+TGG | + | chr3_3:58099755-58099774 | Msa0460620:CDS | 45.0% | |
| TCCTTCAACTTCTTCCAAGC+TGG | - | chr3_3:58099799-58099818 | None:intergenic | 45.0% | |
| !! | AAAAATATTATTGAATAAAA+AGG | - | chr3_3:58097710-58097729 | None:intergenic | 5.0% |
| !!! | TAAAAAATTACAAAAATTTT+GGG | - | chr3_3:58098158-58098177 | None:intergenic | 5.0% |
| !!! | ATAAAAAATTACAAAAATTT+TGG | - | chr3_3:58098159-58098178 | None:intergenic | 5.0% |
| !! | AAAAATATTATTGAATAAAA+AGG | - | chr3_3:58097710-58097729 | None:intergenic | 5.0% |
| !!! | TAAAAAATTACAAAAATTTT+GGG | - | chr3_3:58098158-58098177 | None:intergenic | 5.0% |
| !!! | ATAAAAAATTACAAAAATTT+TGG | - | chr3_3:58098159-58098178 | None:intergenic | 5.0% |
| !! | ACCAAGAGAGAGCACCAATG+GGG | + | chr3_3:58098851-58098870 | Msa0460620:intron | 50.0% |
| ! | TACGGGTTTGGTATCCCATG+TGG | - | chr3_3:58098886-58098905 | None:intergenic | 50.0% |
| GCCAGCTTGGAAGAAGTTGA+AGG | + | chr3_3:58099795-58099814 | Msa0460620:CDS | 50.0% | |
| !! | ACCAAGAGAGAGCACCAATG+GGG | + | chr3_3:58098851-58098870 | Msa0460620:intron | 50.0% |
| ! | TACGGGTTTGGTATCCCATG+TGG | - | chr3_3:58098886-58098905 | None:intergenic | 50.0% |
| GCCAGCTTGGAAGAAGTTGA+AGG | + | chr3_3:58099795-58099814 | Msa0460620:CDS | 50.0% | |
| AGCATGTCCTCAGAGGGTGA+TGG | + | chr3_3:58097539-58097558 | Msa0460620:CDS | 55.0% | |
| ACCTGAGTTCCTTCTCCTCC+AGG | + | chr3_3:58097632-58097651 | Msa0460620:CDS | 55.0% | |
| ACCTGGAGGAGAAGGAACTC+AGG | - | chr3_3:58097636-58097655 | None:intergenic | 55.0% | |
| CCTTGAAACCGCCCTTTGGA+TGG | - | chr3_3:58098119-58098138 | None:intergenic | 55.0% | |
| CCATCCAAAGGGCGGTTTCA+AGG | + | chr3_3:58098116-58098135 | Msa0460620:intron | 55.0% | |
| !!! | ATTTTGGGGCAGAGGCTCAC+CGG | - | chr3_3:58098143-58098162 | None:intergenic | 55.0% |
| ! | TCCCCATTGGTGCTCTCTCT+TGG | - | chr3_3:58098855-58098874 | None:intergenic | 55.0% |
| GCAGCAAAGTATGCAGACCG+TGG | + | chr3_3:58099412-58099431 | Msa0460620:CDS | 55.0% | |
| TGCCAAGTAGGTCAGGACCA+CGG | - | chr3_3:58099432-58099451 | None:intergenic | 55.0% | |
| AGCATGTCCTCAGAGGGTGA+TGG | + | chr3_3:58097539-58097558 | Msa0460620:CDS | 55.0% | |
| ACCTGAGTTCCTTCTCCTCC+AGG | + | chr3_3:58097632-58097651 | Msa0460620:CDS | 55.0% | |
| ACCTGGAGGAGAAGGAACTC+AGG | - | chr3_3:58097636-58097655 | None:intergenic | 55.0% | |
| CCTTGAAACCGCCCTTTGGA+TGG | - | chr3_3:58098119-58098138 | None:intergenic | 55.0% | |
| CCATCCAAAGGGCGGTTTCA+AGG | + | chr3_3:58098116-58098135 | Msa0460620:intron | 55.0% | |
| !!! | ATTTTGGGGCAGAGGCTCAC+CGG | - | chr3_3:58098143-58098162 | None:intergenic | 55.0% |
| ! | TCCCCATTGGTGCTCTCTCT+TGG | - | chr3_3:58098855-58098874 | None:intergenic | 55.0% |
| GCAGCAAAGTATGCAGACCG+TGG | + | chr3_3:58099412-58099431 | Msa0460620:CDS | 55.0% | |
| TGCCAAGTAGGTCAGGACCA+CGG | - | chr3_3:58099432-58099451 | None:intergenic | 55.0% | |
| AGGCAAGCCATCACCCTCTG+AGG | - | chr3_3:58097549-58097568 | None:intergenic | 60.0% | |
| CAAAGGGCGGTTTCAAGGCC+CGG | + | chr3_3:58098121-58098140 | Msa0460620:intron | 60.0% | |
| !!! | TTTTGGGGCAGAGGCTCACC+GGG | - | chr3_3:58098142-58098161 | None:intergenic | 60.0% |
| GAGCACCAATGGGGACGACA+TGG | + | chr3_3:58098860-58098879 | Msa0460620:intron | 60.0% | |
| TGTGGCCATGTCGTCCCCAT+TGG | - | chr3_3:58098868-58098887 | None:intergenic | 60.0% | |
| ATGGGGACGACATGGCCACA+TGG | + | chr3_3:58098868-58098887 | Msa0460620:intron | 60.0% | |
| TGGGGACGACATGGCCACAT+GGG | + | chr3_3:58098869-58098888 | Msa0460620:intron | 60.0% | |
| GACCGTGGTCCTGACCTACT+TGG | + | chr3_3:58099427-58099446 | Msa0460620:CDS | 60.0% | |
| AGGCAAGCCATCACCCTCTG+AGG | - | chr3_3:58097549-58097568 | None:intergenic | 60.0% | |
| CAAAGGGCGGTTTCAAGGCC+CGG | + | chr3_3:58098121-58098140 | Msa0460620:intron | 60.0% | |
| !!! | TTTTGGGGCAGAGGCTCACC+GGG | - | chr3_3:58098142-58098161 | None:intergenic | 60.0% |
| GAGCACCAATGGGGACGACA+TGG | + | chr3_3:58098860-58098879 | Msa0460620:intron | 60.0% | |
| TGTGGCCATGTCGTCCCCAT+TGG | - | chr3_3:58098868-58098887 | None:intergenic | 60.0% | |
| ATGGGGACGACATGGCCACA+TGG | + | chr3_3:58098868-58098887 | Msa0460620:intron | 60.0% | |
| TGGGGACGACATGGCCACAT+GGG | + | chr3_3:58098869-58098888 | Msa0460620:intron | 60.0% | |
| GACCGTGGTCCTGACCTACT+TGG | + | chr3_3:58099427-58099446 | Msa0460620:CDS | 60.0% | |
| CGGGCCTTGAAACCGCCCTT+TGG | - | chr3_3:58098123-58098142 | None:intergenic | 65.0% | |
| CGGGCCTTGAAACCGCCCTT+TGG | - | chr3_3:58098123-58098142 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 58097474 | 58099828 | 58097474 | ID=Msa0460620;Name=Msa0460620 |
| chr3_3 | mRNA | 58097474 | 58099828 | 58097474 | ID=Msa0460620-mRNA-1;Parent=Msa0460620;Name=Msa0460620-mRNA-1;_AED=0.02;_eAED=0.02;_QI=33|1|0.66|1|1|1|3|0|212 |
| chr3_3 | exon | 58097474 | 58097653 | 58097474 | ID=Msa0460620-mRNA-1:exon:12025;Parent=Msa0460620-mRNA-1 |
| chr3_3 | exon | 58098635 | 58098683 | 58098635 | ID=Msa0460620-mRNA-1:exon:12026;Parent=Msa0460620-mRNA-1 |
| chr3_3 | exon | 58099386 | 58099828 | 58099386 | ID=Msa0460620-mRNA-1:exon:12027;Parent=Msa0460620-mRNA-1 |
| chr3_3 | five_prime_UTR | 58097474 | 58097506 | 58097474 | ID=Msa0460620-mRNA-1:five_prime_utr;Parent=Msa0460620-mRNA-1 |
| chr3_3 | CDS | 58097507 | 58097653 | 58097507 | ID=Msa0460620-mRNA-1:cds;Parent=Msa0460620-mRNA-1 |
| chr3_3 | CDS | 58098635 | 58098683 | 58098635 | ID=Msa0460620-mRNA-1:cds;Parent=Msa0460620-mRNA-1 |
| chr3_3 | CDS | 58099386 | 58099828 | 58099386 | ID=Msa0460620-mRNA-1:cds;Parent=Msa0460620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
