Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415620 | XP_003600650.2 | 99.528 | 212 | 1 | 0 | 1 | 212 | 1 | 212 | 2.03e-153 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415620 | sp|Q96324|GSTFB_ARATH | 58.491 | 212 | 88 | 0 | 1 | 212 | 1 | 212 | 2.17e-91 | 270 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415620 | A0A2Z2Z7E2 | 99.528 | 212 | 1 | 0 | 1 | 212 | 1 | 212 | 9.67e-154 | 434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010560 | Msa0415620 | 0.818830 | 1.597177e-52 | -8.615850e-47 |
| Msa0050990 | Msa0415620 | 0.819101 | 1.386173e-52 | -8.615850e-47 |
| Msa0101300 | Msa0415620 | 0.818965 | 1.488042e-52 | -8.615850e-47 |
| Msa0193890 | Msa0415620 | 0.814952 | 1.185308e-51 | -8.615850e-47 |
| Msa0367850 | Msa0415620 | 0.970770 | 3.992443e-132 | -8.615850e-47 |
| Msa0368080 | Msa0415620 | 0.818299 | 2.107793e-52 | -8.615850e-47 |
| Msa0386740 | Msa0415620 | 0.807214 | 5.638528e-50 | -8.615850e-47 |
| Msa0415620 | Msa0453330 | 0.801356 | 9.356906e-49 | -8.615850e-47 |
| Msa0415620 | Msa0460620 | 0.949041 | 2.834404e-107 | -8.615850e-47 |
| Msa0415620 | Msa0460980 | 0.817436 | 3.301028e-52 | -8.615850e-47 |
| Msa0415620 | Msa0495320 | 0.800714 | 1.265826e-48 | -8.615850e-47 |
| Msa0415620 | Msa0506980 | 0.824916 | 6.226534e-54 | -8.615850e-47 |
| Msa0415620 | Msa0574890 | 0.807665 | 4.524309e-50 | -8.615850e-47 |
| Msa0415620 | Msa0740640 | 0.807064 | 6.065623e-50 | -8.615850e-47 |
| Msa0415620 | Msa0754030 | 0.807538 | 4.814031e-50 | -8.615850e-47 |
| Msa0415620 | Msa0807110 | 0.819230 | 1.295506e-52 | -8.615850e-47 |
| Msa0415620 | Msa0833040 | 0.817362 | 3.429967e-52 | -8.615850e-47 |
| Msa0415620 | Msa0938480 | 0.806427 | 8.271700e-50 | -8.615850e-47 |
| Msa0415620 | Msa1082500 | 0.815755 | 7.859012e-52 | -8.615850e-47 |
| Msa0415620 | Msa1116130 | -0.801853 | 7.402524e-49 | -8.615850e-47 |
| Msa0415620 | Msa1129550 | 0.819982 | 8.724582e-53 | -8.615850e-47 |
| Msa0415620 | Msa1129730 | 0.825307 | 5.035202e-54 | -8.615850e-47 |
| Msa0415620 | Msa1162550 | -0.800439 | 1.440324e-48 | -8.615850e-47 |
| Msa0415620 | Msa1179940 | 0.811167 | 8.017275e-51 | -8.615850e-47 |
| Msa0415620 | Msa1179970 | 0.805797 | 1.122536e-49 | -8.615850e-47 |
| Msa0415620 | Msa1212940 | 0.801721 | 7.876145e-49 | -8.615850e-47 |
| Msa0415620 | Msa1357240 | 0.804025 | 2.633057e-49 | -8.615850e-47 |
| Msa0415620 | Msa1408870 | 0.819427 | 1.168317e-52 | -8.615850e-47 |
| Msa0415620 | Msa1423880 | 0.800700 | 1.274178e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415620 | MtrunA17_Chr3g0109891 | 99.528 | 212 | 1 | 0 | 1 | 212 | 1 | 212 | 1.86e-157 | 434 |
| Msa0415620 | MtrunA17_Chr3g0095781 | 57.820 | 211 | 88 | 1 | 1 | 211 | 1 | 210 | 5.99e-86 | 253 |
| Msa0415620 | MtrunA17_Chr5g0442751 | 54.930 | 213 | 90 | 4 | 1 | 210 | 1 | 210 | 1.49e-78 | 234 |
| Msa0415620 | MtrunA17_Chr5g0442741 | 51.643 | 213 | 99 | 3 | 1 | 211 | 1 | 211 | 3.84e-74 | 223 |
| Msa0415620 | MtrunA17_Chr3g0095821 | 54.878 | 164 | 74 | 0 | 48 | 211 | 1 | 164 | 1.98e-66 | 202 |
| Msa0415620 | MtrunA17_Chr1g0157211 | 45.794 | 214 | 111 | 2 | 3 | 211 | 5 | 218 | 8.45e-62 | 192 |
| Msa0415620 | MtrunA17_Chr1g0195811 | 43.478 | 207 | 116 | 1 | 2 | 208 | 3 | 208 | 5.18e-58 | 182 |
| Msa0415620 | MtrunA17_Chr1g0195821 | 44.444 | 207 | 114 | 1 | 2 | 208 | 3 | 208 | 6.90e-57 | 179 |
| Msa0415620 | MtrunA17_Chr1g0195831 | 42.584 | 209 | 118 | 2 | 1 | 208 | 1 | 208 | 2.06e-56 | 178 |
| Msa0415620 | MtrunA17_Chr8g0386711 | 27.014 | 211 | 147 | 3 | 1 | 206 | 1 | 209 | 2.60e-14 | 69.7 |
| Msa0415620 | MtrunA17_Chr3g0095811 | 61.224 | 49 | 18 | 1 | 1 | 49 | 1 | 48 | 4.01e-13 | 62.4 |
| Msa0415620 | MtrunA17_Chr2g0276951 | 33.333 | 129 | 77 | 4 | 40 | 167 | 42 | 162 | 5.84e-13 | 67.0 |
| Msa0415620 | MtrunA17_Chr0c12g0493651 | 33.333 | 132 | 74 | 4 | 40 | 167 | 40 | 161 | 2.65e-12 | 65.1 |
| Msa0415620 | MtrunA17_Chr3g0102331 | 31.783 | 129 | 79 | 5 | 40 | 167 | 40 | 160 | 6.46e-12 | 63.9 |
| Msa0415620 | MtrunA17_Chr4g0076691 | 28.358 | 201 | 125 | 5 | 5 | 202 | 18 | 202 | 1.12e-11 | 62.0 |
| Msa0415620 | MtrunA17_Chr4g0076681 | 34.906 | 106 | 68 | 1 | 5 | 110 | 18 | 122 | 1.64e-11 | 61.6 |
| Msa0415620 | MtrunA17_Chr1g0198101 | 44.444 | 63 | 34 | 1 | 146 | 208 | 1 | 62 | 5.93e-11 | 56.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415620 | AT3G03190.1 | 58.491 | 212 | 88 | 0 | 1 | 212 | 1 | 212 | 2.20e-92 | 270 |
| Msa0415620 | AT5G17220.1 | 54.717 | 212 | 96 | 0 | 1 | 212 | 1 | 212 | 3.77e-88 | 259 |
| Msa0415620 | AT2G30870.1 | 51.923 | 208 | 99 | 1 | 1 | 208 | 1 | 207 | 8.64e-76 | 228 |
| Msa0415620 | AT2G30860.1 | 50.725 | 207 | 101 | 1 | 1 | 207 | 1 | 206 | 2.50e-71 | 216 |
| Msa0415620 | AT3G62760.1 | 43.541 | 209 | 116 | 2 | 1 | 208 | 1 | 208 | 3.59e-56 | 178 |
| Msa0415620 | AT1G02930.2 | 42.718 | 206 | 116 | 2 | 3 | 208 | 4 | 207 | 1.95e-53 | 170 |
| Msa0415620 | AT1G02930.1 | 42.718 | 206 | 116 | 2 | 3 | 208 | 4 | 207 | 1.95e-53 | 170 |
| Msa0415620 | AT1G02920.1 | 43.204 | 206 | 116 | 1 | 3 | 208 | 4 | 208 | 7.56e-53 | 169 |
| Msa0415620 | AT2G47730.2 | 42.308 | 208 | 118 | 2 | 5 | 211 | 54 | 260 | 1.27e-50 | 165 |
| Msa0415620 | AT2G47730.1 | 42.308 | 208 | 118 | 2 | 5 | 211 | 54 | 260 | 1.27e-50 | 165 |
| Msa0415620 | AT4G02520.1 | 40.952 | 210 | 120 | 2 | 3 | 209 | 4 | 212 | 2.17e-50 | 163 |
| Msa0415620 | AT1G02950.2 | 42.647 | 204 | 115 | 2 | 4 | 206 | 28 | 230 | 2.24e-49 | 161 |
| Msa0415620 | AT1G02950.3 | 42.647 | 204 | 115 | 2 | 4 | 206 | 26 | 228 | 2.39e-49 | 161 |
| Msa0415620 | AT1G02950.1 | 42.647 | 204 | 115 | 2 | 4 | 206 | 26 | 228 | 2.39e-49 | 161 |
| Msa0415620 | AT2G30860.2 | 50.323 | 155 | 76 | 1 | 1 | 155 | 1 | 154 | 2.42e-49 | 159 |
| Msa0415620 | AT1G02950.5 | 42.647 | 204 | 115 | 2 | 4 | 206 | 38 | 240 | 3.81e-49 | 161 |
| Msa0415620 | AT2G02930.1 | 41.148 | 209 | 119 | 2 | 3 | 208 | 4 | 211 | 4.43e-49 | 159 |
| Msa0415620 | AT1G49860.1 | 43.979 | 191 | 104 | 2 | 20 | 207 | 22 | 212 | 1.59e-48 | 159 |
| Msa0415620 | AT1G02940.4 | 38.537 | 205 | 124 | 2 | 4 | 207 | 40 | 243 | 9.43e-46 | 152 |
| Msa0415620 | AT1G02940.1 | 38.537 | 205 | 124 | 2 | 4 | 207 | 40 | 243 | 9.43e-46 | 152 |
| Msa0415620 | AT1G02940.3 | 38.537 | 205 | 124 | 2 | 4 | 207 | 53 | 256 | 1.19e-45 | 152 |
| Msa0415620 | AT1G02940.2 | 38.537 | 205 | 124 | 2 | 4 | 207 | 65 | 268 | 1.27e-45 | 152 |
| Msa0415620 | AT1G02950.4 | 40.278 | 144 | 84 | 2 | 64 | 206 | 60 | 202 | 3.37e-28 | 106 |
| Msa0415620 | AT5G41240.1 | 28.708 | 209 | 142 | 3 | 1 | 204 | 1 | 207 | 2.11e-14 | 71.6 |
| Msa0415620 | AT1G77290.3 | 23.629 | 237 | 149 | 6 | 3 | 208 | 1 | 236 | 1.52e-13 | 68.2 |
| Msa0415620 | AT1G77290.1 | 23.629 | 237 | 149 | 6 | 3 | 208 | 1 | 236 | 1.52e-13 | 68.2 |
| Msa0415620 | AT1G77290.2 | 23.629 | 237 | 149 | 6 | 3 | 208 | 1 | 236 | 1.52e-13 | 68.2 |
| Msa0415620 | AT5G41210.1 | 27.228 | 202 | 142 | 2 | 1 | 197 | 2 | 203 | 3.69e-13 | 66.6 |
| Msa0415620 | AT1G09640.2 | 28.272 | 191 | 124 | 4 | 27 | 211 | 22 | 205 | 5.20e-13 | 66.6 |
| Msa0415620 | AT5G41220.1 | 27.228 | 202 | 142 | 2 | 1 | 197 | 1 | 202 | 1.01e-12 | 67.0 |
| Msa0415620 | AT1G57720.1 | 32.824 | 131 | 76 | 4 | 40 | 167 | 40 | 161 | 1.54e-12 | 66.2 |
| Msa0415620 | AT1G57720.2 | 32.824 | 131 | 76 | 4 | 40 | 167 | 40 | 161 | 1.54e-12 | 66.2 |
| Msa0415620 | AT1G09640.1 | 32.653 | 147 | 86 | 4 | 27 | 167 | 22 | 161 | 6.47e-12 | 64.3 |
Find 50 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATGGTGGTTAAAGTTTA+TGG | 0.134206 | 3_2:-61934628 | Msa0415620:CDS |
| TCTTATTGAGGCAGCAAAAT+TGG | 0.186477 | 3_2:-61932423 | Msa0415620:CDS |
| CTTAGCCATCTTCCTGGAAT+TGG | 0.305727 | 3_2:-61932449 | Msa0415620:CDS |
| GATGGTGATTTCAGACTCTT+TGG | 0.307785 | 3_2:-61933471 | Msa0415620:intron |
| GTGCATATTGATCTTGATAA+AGG | 0.322979 | 3_2:-61934535 | Msa0415620:CDS |
| GCTGATCTTAGCCATCTTCC+TGG | 0.323812 | 3_2:-61932455 | Msa0415620:CDS |
| TCTAAAAGCACTTATCTTGC+TGG | 0.332817 | 3_2:-61932494 | Msa0415620:CDS |
| ACTAAAGAGAAGGGGAAATA+TGG | 0.336447 | 3_2:-61934644 | Msa0415620:exon |
| TTGGAAGAAGTTGAAGGAAT+TGG | 0.377135 | 3_2:-61932336 | Msa0415620:CDS |
| AAATCACCATCCTCTACAAC+TGG | 0.411376 | 3_2:+61933483 | None:intergenic |
| CTTATTGAGGCAGCAAAATT+GGG | 0.415280 | 3_2:-61932422 | Msa0415620:CDS |
| CTGTGATTTGTGTAGAATCA+AGG | 0.424395 | 3_2:-61932766 | Msa0415620:intron |
| TCAATAAGATGTCCAATTCC+AGG | 0.451011 | 3_2:+61932437 | None:intergenic |
| CTTCTAAAGTTGTGCCAAGT+AGG | 0.455796 | 3_2:+61932696 | None:intergenic |
| AAAGTTGTGCCAAGTAGGTC+AGG | 0.467376 | 3_2:+61932701 | None:intergenic |
| ACCTGAGTTCCTTCTCCTCC+AGG | 0.473534 | 3_2:-61934500 | Msa0415620:intron |
| AGAAAGCTGTGGTGGATCAA+TGG | 0.498575 | 3_2:-61932673 | Msa0415620:CDS |
| TTTCAAGTAACTAAAGAGAA+GGG | 0.498682 | 3_2:-61934653 | Msa0415620:five_prime_UTR |
| TGCTGGTGATAAGTTCACTT+TGG | 0.510705 | 3_2:-61932477 | Msa0415620:CDS |
| TAGAATCAAGGGCTATTGTA+AGG | 0.513820 | 3_2:-61932754 | Msa0415620:CDS |
| AAGTTGAAGGAATTGGCATA+AGG | 0.515297 | 3_2:-61932329 | None:intergenic |
| GATGTCCAATTCCAGGAAGA+TGG | 0.515702 | 3_2:+61932444 | None:intergenic |
| GGTGGGAGAAAATTTCTAGT+AGG | 0.528843 | 3_2:-61932364 | Msa0415620:CDS |
| ACAACTGGAACTTGACCAAA+GGG | 0.534533 | 3_2:+61933498 | None:intergenic |
| AAATTTCTAGTAGGTCAGCT+TGG | 0.538747 | 3_2:-61932355 | Msa0415620:CDS |
| TATATACTACCTGGAGGAGA+AGG | 0.540663 | 3_2:+61934491 | None:intergenic |
| TGGTCAAGTTCCAGTTGTAG+AGG | 0.543144 | 3_2:-61933493 | Msa0415620:CDS |
| GACCGTGGTCCTGACCTACT+TGG | 0.545257 | 3_2:-61932710 | Msa0415620:CDS |
| TGAGCTATAGTTATGTCTCC+AGG | 0.558174 | 3_2:+61932569 | None:intergenic |
| TGTGATTTGTGTAGAATCAA+GGG | 0.558216 | 3_2:-61932765 | Msa0415620:intron |
| GTCAGCTTGGAAGAAGTTGA+AGG | 0.574304 | 3_2:-61932342 | Msa0415620:CDS |
| CAAGTTCCAGTTGTAGAGGA+TGG | 0.575857 | 3_2:-61933489 | Msa0415620:CDS |
| AGAGGAAGAATGTGAATGCT+TGG | 0.577760 | 3_2:-61932385 | Msa0415620:CDS |
| TTCAAGTAACTAAAGAGAAG+GGG | 0.585069 | 3_2:-61934652 | Msa0415620:five_prime_UTR |
| TTTAGAAGAGAAAGCTGTGG+TGG | 0.591968 | 3_2:-61932681 | Msa0415620:CDS |
| TGGAATTGGACATCTTATTG+AGG | 0.594707 | 3_2:-61932435 | Msa0415620:CDS |
| GAAGAATGTGAATGCTTGGT+GGG | 0.598085 | 3_2:-61932381 | Msa0415620:CDS |
| GGAAGAATGTGAATGCTTGG+TGG | 0.600496 | 3_2:-61932382 | Msa0415620:CDS |
| AAAGAGAAGGGGAAATATGG+TGG | 0.600841 | 3_2:-61934641 | Msa0415620:exon |
| TACAACTGGAACTTGACCAA+AGG | 0.607365 | 3_2:+61933497 | None:intergenic |
| TGGGACATTTGATTAGTGAG+AGG | 0.608261 | 3_2:-61932403 | Msa0415620:CDS |
| TAATGCAGCATGTCCTCAGA+GGG | 0.631190 | 3_2:-61934599 | Msa0415620:CDS |
| ACCTGGAGGAGAAGGAACTC+AGG | 0.631815 | 3_2:+61934499 | None:intergenic |
| AGCATGTCCTCAGAGGGTGA+TGG | 0.631871 | 3_2:-61934593 | Msa0415620:CDS |
| AGGCAAGCCATCACCCTCTG+AGG | 0.647961 | 3_2:+61934586 | None:intergenic |
| TTAATGCAGCATGTCCTCAG+AGG | 0.685889 | 3_2:-61934600 | Msa0415620:CDS |
| AACTTTAGAAGAGAAAGCTG+TGG | 0.697603 | 3_2:-61932684 | Msa0415620:CDS |
| TGCCAAGTAGGTCAGGACCA+CGG | 0.707978 | 3_2:+61932708 | None:intergenic |
| GCAGCAAAGTATGCAGACCG+TGG | 0.728704 | 3_2:-61932725 | Msa0415620:CDS |
| TGCTTGATGTGTATGAACGT+AGG | 0.749850 | 3_2:-61932520 | Msa0415620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATTACAAAAATTTTG+GGG | + | chr3_2:61933013-61933032 | None:intergenic | 10.0% |
| !! | GTTTATATAATAAATTAAGA+GGG | + | chr3_2:61933044-61933063 | None:intergenic | 10.0% |
| !!! | TTTTCATTATGATAATATTT+TGG | + | chr3_2:61933941-61933960 | None:intergenic | 10.0% |
| !!! | AAAAAATTACAAAAATTTTG+GGG | + | chr3_2:61933013-61933032 | None:intergenic | 10.0% |
| !! | GTTTATATAATAAATTAAGA+GGG | + | chr3_2:61933044-61933063 | None:intergenic | 10.0% |
| !!! | TTTTCATTATGATAATATTT+TGG | + | chr3_2:61933941-61933960 | None:intergenic | 10.0% |
| !!! | AAAATATAGTTGAGATATTT+TGG | - | chr3_2:61932623-61932642 | Msa0415620:CDS | 15.0% |
| !!! | TTTCTCCTTTTTTTTTATAA+AGG | - | chr3_2:61932693-61932712 | Msa0415620:CDS | 15.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | - | chr3_2:61932754-61932773 | Msa0415620:CDS | 15.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | - | chr3_2:61932754-61932773 | Msa0415620:CDS | 15.0% |
| !!! | AGATTTATTATATTGATTGA+TGG | - | chr3_2:61932853-61932872 | Msa0415620:intron | 15.0% |
| !! | GGTTTATATAATAAATTAAG+AGG | + | chr3_2:61933045-61933064 | None:intergenic | 15.0% |
| !! | AAAAATTGCACAATTTATAA+GGG | + | chr3_2:61933066-61933085 | None:intergenic | 15.0% |
| !! | AAAAAATTGCACAATTTATA+AGG | + | chr3_2:61933067-61933086 | None:intergenic | 15.0% |
| !! | CTAGAATTATTATAAAGTTT+GGG | + | chr3_2:61933156-61933175 | None:intergenic | 15.0% |
| !!! | TTTAATTTTCATAGTTTCAT+TGG | - | chr3_2:61934033-61934052 | Msa0415620:intron | 15.0% |
| !!! | GTTTGTATTTTATAATTCAT+GGG | - | chr3_2:61934055-61934074 | Msa0415620:intron | 15.0% |
| !!! | GAGCTTTTAAATATATTATT+AGG | + | chr3_2:61934125-61934144 | None:intergenic | 15.0% |
| !!! | AAAATATAGTTGAGATATTT+TGG | - | chr3_2:61932623-61932642 | Msa0415620:CDS | 15.0% |
| !!! | TTTCTCCTTTTTTTTTATAA+AGG | - | chr3_2:61932693-61932712 | Msa0415620:CDS | 15.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | - | chr3_2:61932754-61932773 | Msa0415620:CDS | 15.0% |
| !! | AGTGTTAATTAATTAAAAGT+GGG | - | chr3_2:61932754-61932773 | Msa0415620:CDS | 15.0% |
| !!! | AGATTTATTATATTGATTGA+TGG | - | chr3_2:61932853-61932872 | Msa0415620:intron | 15.0% |
| !! | GGTTTATATAATAAATTAAG+AGG | + | chr3_2:61933045-61933064 | None:intergenic | 15.0% |
| !! | AAAAATTGCACAATTTATAA+GGG | + | chr3_2:61933066-61933085 | None:intergenic | 15.0% |
| !! | AAAAAATTGCACAATTTATA+AGG | + | chr3_2:61933067-61933086 | None:intergenic | 15.0% |
| !! | CTAGAATTATTATAAAGTTT+GGG | + | chr3_2:61933156-61933175 | None:intergenic | 15.0% |
| !!! | TTTAATTTTCATAGTTTCAT+TGG | - | chr3_2:61934033-61934052 | Msa0415620:intron | 15.0% |
| !!! | GTTTGTATTTTATAATTCAT+GGG | - | chr3_2:61934055-61934074 | Msa0415620:intron | 15.0% |
| !!! | GAGCTTTTAAATATATTATT+AGG | + | chr3_2:61934125-61934144 | None:intergenic | 15.0% |
| !! | TTTATAAACTATATACTACC+TGG | + | chr3_2:61932510-61932529 | None:intergenic | 20.0% |
| !!! | GAAAAATACAAAAGTATCTA+GGG | + | chr3_2:61932541-61932560 | None:intergenic | 20.0% |
| !!! | AGAAAAATACAAAAGTATCT+AGG | + | chr3_2:61932542-61932561 | None:intergenic | 20.0% |
| !! | GATTCTTAAATTTGTATGTA+GGG | + | chr3_2:61932725-61932744 | None:intergenic | 20.0% |
| !! | AGATTCTTAAATTTGTATGT+AGG | + | chr3_2:61932726-61932745 | None:intergenic | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | - | chr3_2:61932753-61932772 | Msa0415620:CDS | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | - | chr3_2:61932753-61932772 | Msa0415620:CDS | 20.0% |
| !! | GCTAGAATTATTATAAAGTT+TGG | + | chr3_2:61933157-61933176 | None:intergenic | 20.0% |
| !! | CACAAAATATTTACTATGTT+GGG | + | chr3_2:61933192-61933211 | None:intergenic | 20.0% |
| !! | AAGAAAAATTGATTACATGA+TGG | + | chr3_2:61933464-61933483 | None:intergenic | 20.0% |
| !! | TTGAAGGTAAGAAATAATTA+AGG | + | chr3_2:61933651-61933670 | None:intergenic | 20.0% |
| !!! | GGTTTGTATTTTATAATTCA+TGG | - | chr3_2:61934054-61934073 | Msa0415620:intron | 20.0% |
| !!! | AGTAACATGTTATTTTTTCT+AGG | - | chr3_2:61934169-61934188 | Msa0415620:intron | 20.0% |
| !!! | GTAACATGTTATTTTTTCTA+GGG | - | chr3_2:61934170-61934189 | Msa0415620:intron | 20.0% |
| !! | TTTATAAACTATATACTACC+TGG | + | chr3_2:61932510-61932529 | None:intergenic | 20.0% |
| !!! | GAAAAATACAAAAGTATCTA+GGG | + | chr3_2:61932541-61932560 | None:intergenic | 20.0% |
| !!! | AGAAAAATACAAAAGTATCT+AGG | + | chr3_2:61932542-61932561 | None:intergenic | 20.0% |
| !! | GATTCTTAAATTTGTATGTA+GGG | + | chr3_2:61932725-61932744 | None:intergenic | 20.0% |
| !! | AGATTCTTAAATTTGTATGT+AGG | + | chr3_2:61932726-61932745 | None:intergenic | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | - | chr3_2:61932753-61932772 | Msa0415620:CDS | 20.0% |
| !! | GAGTGTTAATTAATTAAAAG+TGG | - | chr3_2:61932753-61932772 | Msa0415620:CDS | 20.0% |
| !! | GCTAGAATTATTATAAAGTT+TGG | + | chr3_2:61933157-61933176 | None:intergenic | 20.0% |
| !! | CACAAAATATTTACTATGTT+GGG | + | chr3_2:61933192-61933211 | None:intergenic | 20.0% |
| !! | AAGAAAAATTGATTACATGA+TGG | + | chr3_2:61933464-61933483 | None:intergenic | 20.0% |
| !! | TTGAAGGTAAGAAATAATTA+AGG | + | chr3_2:61933651-61933670 | None:intergenic | 20.0% |
| !!! | GGTTTGTATTTTATAATTCA+TGG | - | chr3_2:61934054-61934073 | Msa0415620:intron | 20.0% |
| !!! | AGTAACATGTTATTTTTTCT+AGG | - | chr3_2:61934169-61934188 | Msa0415620:intron | 20.0% |
| !!! | GTAACATGTTATTTTTTCTA+GGG | - | chr3_2:61934170-61934189 | Msa0415620:intron | 20.0% |
| !!! | TTTTCAAGTAACTAAAGAGA+AGG | - | chr3_2:61932335-61932354 | Msa0415620:CDS | 25.0% |
| !! | TTTCAAGTAACTAAAGAGAA+GGG | - | chr3_2:61932336-61932355 | Msa0415620:CDS | 25.0% |
| ! | AATATGGTGGTTAAAGTTTA+TGG | - | chr3_2:61932361-61932380 | Msa0415620:CDS | 25.0% |
| !!! | TTGAGATATTTTGGTTTGTT+GGG | - | chr3_2:61932632-61932651 | Msa0415620:CDS | 25.0% |
| ! | GCACACCTTTATAAAAAAAA+AGG | + | chr3_2:61932701-61932720 | None:intergenic | 25.0% |
| ! | TTCTTTAACGAAAACAATCA+TGG | + | chr3_2:61932888-61932907 | None:intergenic | 25.0% |
| ! | TTTAAAAATGTGCATCCAAA+GGG | - | chr3_2:61932961-61932980 | Msa0415620:intron | 25.0% |
| ! | AATTTGCAACACATTTATAG+AGG | + | chr3_2:61933127-61933146 | None:intergenic | 25.0% |
| ! | GCACAAAATATTTACTATGT+TGG | + | chr3_2:61933193-61933212 | None:intergenic | 25.0% |
| ! | AATATCTCGTACAACTAAAA+TGG | + | chr3_2:61933225-61933244 | None:intergenic | 25.0% |
| ! | TATTGGTGGAATATAATTGA+AGG | + | chr3_2:61933667-61933686 | None:intergenic | 25.0% |
| !!! | AATATGTGGTGTTGATTTAT+TGG | + | chr3_2:61933684-61933703 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGAGTGTCATGTT+AGG | - | chr3_2:61933897-61933916 | Msa0415620:intron | 25.0% |
| !! | CTGTTAGTTTATTTAAAGAG+AGG | - | chr3_2:61934099-61934118 | Msa0415620:intron | 25.0% |
| ! | GCAAAATAAAGTAACATGTT+AGG | - | chr3_2:61934192-61934211 | Msa0415620:intron | 25.0% |
| ! | TCTTGTAATTCTACCAAAAA+TGG | - | chr3_2:61934392-61934411 | Msa0415620:intron | 25.0% |
| ! | CTTGTAATTCTACCAAAAAT+GGG | - | chr3_2:61934393-61934412 | Msa0415620:intron | 25.0% |
| !!! | TTTTCAAGTAACTAAAGAGA+AGG | - | chr3_2:61932335-61932354 | Msa0415620:CDS | 25.0% |
| !! | TTTCAAGTAACTAAAGAGAA+GGG | - | chr3_2:61932336-61932355 | Msa0415620:CDS | 25.0% |
| ! | AATATGGTGGTTAAAGTTTA+TGG | - | chr3_2:61932361-61932380 | Msa0415620:CDS | 25.0% |
| !!! | TTGAGATATTTTGGTTTGTT+GGG | - | chr3_2:61932632-61932651 | Msa0415620:CDS | 25.0% |
| ! | GCACACCTTTATAAAAAAAA+AGG | + | chr3_2:61932701-61932720 | None:intergenic | 25.0% |
| ! | TTCTTTAACGAAAACAATCA+TGG | + | chr3_2:61932888-61932907 | None:intergenic | 25.0% |
| ! | TTTAAAAATGTGCATCCAAA+GGG | - | chr3_2:61932961-61932980 | Msa0415620:intron | 25.0% |
| ! | AATTTGCAACACATTTATAG+AGG | + | chr3_2:61933127-61933146 | None:intergenic | 25.0% |
| ! | GCACAAAATATTTACTATGT+TGG | + | chr3_2:61933193-61933212 | None:intergenic | 25.0% |
| ! | AATATCTCGTACAACTAAAA+TGG | + | chr3_2:61933225-61933244 | None:intergenic | 25.0% |
| ! | TATTGGTGGAATATAATTGA+AGG | + | chr3_2:61933667-61933686 | None:intergenic | 25.0% |
| !!! | AATATGTGGTGTTGATTTAT+TGG | + | chr3_2:61933684-61933703 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGAGTGTCATGTT+AGG | - | chr3_2:61933897-61933916 | Msa0415620:intron | 25.0% |
| !! | CTGTTAGTTTATTTAAAGAG+AGG | - | chr3_2:61934099-61934118 | Msa0415620:intron | 25.0% |
| ! | GCAAAATAAAGTAACATGTT+AGG | - | chr3_2:61934192-61934211 | Msa0415620:intron | 25.0% |
| ! | TCTTGTAATTCTACCAAAAA+TGG | - | chr3_2:61934392-61934411 | Msa0415620:intron | 25.0% |
| ! | CTTGTAATTCTACCAAAAAT+GGG | - | chr3_2:61934393-61934412 | Msa0415620:intron | 25.0% |
| TTCAAGTAACTAAAGAGAAG+GGG | - | chr3_2:61932337-61932356 | Msa0415620:CDS | 30.0% | |
| ! | ATTCTACCTCTTTTTCTAAG+AGG | + | chr3_2:61932426-61932445 | None:intergenic | 30.0% |
| GTGCATATTGATCTTGATAA+AGG | - | chr3_2:61932454-61932473 | Msa0415620:CDS | 30.0% | |
| ATAAACTATATACTACCTGG+AGG | + | chr3_2:61932507-61932526 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTCGTAAATGAT+AGG | - | chr3_2:61932584-61932603 | Msa0415620:CDS | 30.0% |
| !!! | GTTGAGATATTTTGGTTTGT+TGG | - | chr3_2:61932631-61932650 | Msa0415620:CDS | 30.0% |
| TGAAGAGAAATGAGTAATTG+TGG | - | chr3_2:61932938-61932957 | Msa0415620:intron | 30.0% | |
| GTTTAAAAATGTGCATCCAA+AGG | - | chr3_2:61932960-61932979 | Msa0415620:intron | 30.0% | |
| CGAGTAGAATCAAAGATATA+TGG | + | chr3_2:61933412-61933431 | None:intergenic | 30.0% | |
| TCTCTCTTGGTTTAAATATG+TGG | + | chr3_2:61933698-61933717 | None:intergenic | 30.0% | |
| !! | TAAAGAGTATCGATTAGGTA+CGG | + | chr3_2:61933760-61933779 | None:intergenic | 30.0% |
| !! | GACTTTAAAGAGTATCGATT+AGG | + | chr3_2:61933765-61933784 | None:intergenic | 30.0% |
| TAATTCATGGGTATCCATAT+TGG | - | chr3_2:61934067-61934086 | Msa0415620:intron | 30.0% | |
| AACAGATTAACAAGCCAATA+TGG | + | chr3_2:61934084-61934103 | None:intergenic | 30.0% | |
| ! | TGTGATTTGTGTAGAATCAA+GGG | - | chr3_2:61934224-61934243 | Msa0415620:intron | 30.0% |
| TTCAAGTAACTAAAGAGAAG+GGG | - | chr3_2:61932337-61932356 | Msa0415620:CDS | 30.0% | |
| ! | ATTCTACCTCTTTTTCTAAG+AGG | + | chr3_2:61932426-61932445 | None:intergenic | 30.0% |
| GTGCATATTGATCTTGATAA+AGG | - | chr3_2:61932454-61932473 | Msa0415620:CDS | 30.0% | |
| ATAAACTATATACTACCTGG+AGG | + | chr3_2:61932507-61932526 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGTCGTAAATGAT+AGG | - | chr3_2:61932584-61932603 | Msa0415620:CDS | 30.0% |
| !!! | GTTGAGATATTTTGGTTTGT+TGG | - | chr3_2:61932631-61932650 | Msa0415620:CDS | 30.0% |
| TGAAGAGAAATGAGTAATTG+TGG | - | chr3_2:61932938-61932957 | Msa0415620:intron | 30.0% | |
| GTTTAAAAATGTGCATCCAA+AGG | - | chr3_2:61932960-61932979 | Msa0415620:intron | 30.0% | |
| CGAGTAGAATCAAAGATATA+TGG | + | chr3_2:61933412-61933431 | None:intergenic | 30.0% | |
| TCTCTCTTGGTTTAAATATG+TGG | + | chr3_2:61933698-61933717 | None:intergenic | 30.0% | |
| !! | TAAAGAGTATCGATTAGGTA+CGG | + | chr3_2:61933760-61933779 | None:intergenic | 30.0% |
| !! | GACTTTAAAGAGTATCGATT+AGG | + | chr3_2:61933765-61933784 | None:intergenic | 30.0% |
| TAATTCATGGGTATCCATAT+TGG | - | chr3_2:61934067-61934086 | Msa0415620:intron | 30.0% | |
| AACAGATTAACAAGCCAATA+TGG | + | chr3_2:61934084-61934103 | None:intergenic | 30.0% | |
| ! | TGTGATTTGTGTAGAATCAA+GGG | - | chr3_2:61934224-61934243 | Msa0415620:intron | 30.0% |
| ACTAAAGAGAAGGGGAAATA+TGG | - | chr3_2:61932345-61932364 | Msa0415620:CDS | 35.0% | |
| !!! | AGATATTTTGGTTTGTTGGG+TGG | - | chr3_2:61932635-61932654 | Msa0415620:CDS | 35.0% |
| CATTTCTCTTCACTTAGTGT+AGG | + | chr3_2:61932930-61932949 | None:intergenic | 35.0% | |
| !!! | TTACAAAAATTTTGGGGCAG+AGG | + | chr3_2:61933007-61933026 | None:intergenic | 35.0% |
| ATTTACTATGTTGGGTGTAG+TGG | + | chr3_2:61933184-61933203 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTTGCAGCCCTT+TGG | - | chr3_2:61933476-61933495 | Msa0415620:CDS | 35.0% |
| ACTCTTTGGTGAGAATTTGT+TGG | - | chr3_2:61933532-61933551 | Msa0415620:intron | 35.0% | |
| !! | ATGTGGTGTTGATTTATTGG+TGG | + | chr3_2:61933681-61933700 | None:intergenic | 35.0% |
| !! | AAAGAGTATCGATTAGGTAC+GGG | + | chr3_2:61933759-61933778 | None:intergenic | 35.0% |
| ATATTTGCGTGAGCTTTCTA+AGG | + | chr3_2:61933969-61933988 | None:intergenic | 35.0% | |
| ! | CTGTGATTTGTGTAGAATCA+AGG | - | chr3_2:61934223-61934242 | Msa0415620:intron | 35.0% |
| TAGAATCAAGGGCTATTGTA+AGG | - | chr3_2:61934235-61934254 | Msa0415620:intron | 35.0% | |
| ! | AACTTTAGAAGAGAAAGCTG+TGG | - | chr3_2:61934305-61934324 | Msa0415620:intron | 35.0% |
| !! | TCTAAAAGCACTTATCTTGC+TGG | - | chr3_2:61934495-61934514 | Msa0415620:intron | 35.0% |
| TCAATAAGATGTCCAATTCC+AGG | + | chr3_2:61934555-61934574 | None:intergenic | 35.0% | |
| TGGAATTGGACATCTTATTG+AGG | - | chr3_2:61934554-61934573 | Msa0415620:CDS | 35.0% | |
| TCTTATTGAGGCAGCAAAAT+TGG | - | chr3_2:61934566-61934585 | Msa0415620:CDS | 35.0% | |
| CTTATTGAGGCAGCAAAATT+GGG | - | chr3_2:61934567-61934586 | Msa0415620:CDS | 35.0% | |
| !! | AAATTTCTAGTAGGTCAGCT+TGG | - | chr3_2:61934634-61934653 | Msa0415620:exon | 35.0% |
| TTGGAAGAAGTTGAAGGAAT+TGG | - | chr3_2:61934653-61934672 | Msa0415620:five_prime_UTR | 35.0% | |
| AAGTTGAAGGAATTGGCATA+AGG | - | chr3_2:61934660-61934679 | Msa0415620:five_prime_UTR | 35.0% | |
| ACTAAAGAGAAGGGGAAATA+TGG | - | chr3_2:61932345-61932364 | Msa0415620:CDS | 35.0% | |
| !!! | AGATATTTTGGTTTGTTGGG+TGG | - | chr3_2:61932635-61932654 | Msa0415620:CDS | 35.0% |
| CATTTCTCTTCACTTAGTGT+AGG | + | chr3_2:61932930-61932949 | None:intergenic | 35.0% | |
| !!! | TTACAAAAATTTTGGGGCAG+AGG | + | chr3_2:61933007-61933026 | None:intergenic | 35.0% |
| ATTTACTATGTTGGGTGTAG+TGG | + | chr3_2:61933184-61933203 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTTGCAGCCCTT+TGG | - | chr3_2:61933476-61933495 | Msa0415620:CDS | 35.0% |
| ACTCTTTGGTGAGAATTTGT+TGG | - | chr3_2:61933532-61933551 | Msa0415620:intron | 35.0% | |
| !! | ATGTGGTGTTGATTTATTGG+TGG | + | chr3_2:61933681-61933700 | None:intergenic | 35.0% |
| !! | AAAGAGTATCGATTAGGTAC+GGG | + | chr3_2:61933759-61933778 | None:intergenic | 35.0% |
| ATATTTGCGTGAGCTTTCTA+AGG | + | chr3_2:61933969-61933988 | None:intergenic | 35.0% | |
| ! | CTGTGATTTGTGTAGAATCA+AGG | - | chr3_2:61934223-61934242 | Msa0415620:intron | 35.0% |
| TAGAATCAAGGGCTATTGTA+AGG | - | chr3_2:61934235-61934254 | Msa0415620:intron | 35.0% | |
| ! | AACTTTAGAAGAGAAAGCTG+TGG | - | chr3_2:61934305-61934324 | Msa0415620:intron | 35.0% |
| !! | TCTAAAAGCACTTATCTTGC+TGG | - | chr3_2:61934495-61934514 | Msa0415620:intron | 35.0% |
| TCAATAAGATGTCCAATTCC+AGG | + | chr3_2:61934555-61934574 | None:intergenic | 35.0% | |
| TGGAATTGGACATCTTATTG+AGG | - | chr3_2:61934554-61934573 | Msa0415620:CDS | 35.0% | |
| TCTTATTGAGGCAGCAAAAT+TGG | - | chr3_2:61934566-61934585 | Msa0415620:CDS | 35.0% | |
| CTTATTGAGGCAGCAAAATT+GGG | - | chr3_2:61934567-61934586 | Msa0415620:CDS | 35.0% | |
| !! | AAATTTCTAGTAGGTCAGCT+TGG | - | chr3_2:61934634-61934653 | Msa0415620:exon | 35.0% |
| TTGGAAGAAGTTGAAGGAAT+TGG | - | chr3_2:61934653-61934672 | Msa0415620:five_prime_UTR | 35.0% | |
| AAAGAGAAGGGGAAATATGG+TGG | - | chr3_2:61932348-61932367 | Msa0415620:CDS | 40.0% | |
| TATATACTACCTGGAGGAGA+AGG | + | chr3_2:61932501-61932520 | None:intergenic | 40.0% | |
| AAAAATGTGCATCCAAAGGG+CGG | - | chr3_2:61932964-61932983 | Msa0415620:intron | 40.0% | |
| ACAACTGGAACTTGACCAAA+GGG | + | chr3_2:61933494-61933513 | None:intergenic | 40.0% | |
| TACAACTGGAACTTGACCAA+AGG | + | chr3_2:61933495-61933514 | None:intergenic | 40.0% | |
| AAATCACCATCCTCTACAAC+TGG | + | chr3_2:61933509-61933528 | None:intergenic | 40.0% | |
| GATGGTGATTTCAGACTCTT+TGG | - | chr3_2:61933518-61933537 | Msa0415620:intron | 40.0% | |
| GACAGACATTACGTCATGTT+AGG | - | chr3_2:61933865-61933884 | Msa0415620:intron | 40.0% | |
| !! | CTTCTAAAGTTGTGCCAAGT+AGG | + | chr3_2:61934296-61934315 | None:intergenic | 40.0% |
| TTTAGAAGAGAAAGCTGTGG+TGG | - | chr3_2:61934308-61934327 | Msa0415620:intron | 40.0% | |
| TGAGCTATAGTTATGTCTCC+AGG | + | chr3_2:61934423-61934442 | None:intergenic | 40.0% | |
| TGCTTGATGTGTATGAACGT+AGG | - | chr3_2:61934469-61934488 | Msa0415620:intron | 40.0% | |
| TGCTGGTGATAAGTTCACTT+TGG | - | chr3_2:61934512-61934531 | Msa0415620:CDS | 40.0% | |
| TGGGACATTTGATTAGTGAG+AGG | - | chr3_2:61934586-61934605 | Msa0415620:CDS | 40.0% | |
| AGAGGAAGAATGTGAATGCT+TGG | - | chr3_2:61934604-61934623 | Msa0415620:CDS | 40.0% | |
| GAAGAATGTGAATGCTTGGT+GGG | - | chr3_2:61934608-61934627 | Msa0415620:CDS | 40.0% | |
| !! | GGTGGGAGAAAATTTCTAGT+AGG | - | chr3_2:61934625-61934644 | Msa0415620:CDS | 40.0% |
| AAAGAGAAGGGGAAATATGG+TGG | - | chr3_2:61932348-61932367 | Msa0415620:CDS | 40.0% | |
| TATATACTACCTGGAGGAGA+AGG | + | chr3_2:61932501-61932520 | None:intergenic | 40.0% | |
| AAAAATGTGCATCCAAAGGG+CGG | - | chr3_2:61932964-61932983 | Msa0415620:intron | 40.0% | |
| ACAACTGGAACTTGACCAAA+GGG | + | chr3_2:61933494-61933513 | None:intergenic | 40.0% | |
| TACAACTGGAACTTGACCAA+AGG | + | chr3_2:61933495-61933514 | None:intergenic | 40.0% | |
| AAATCACCATCCTCTACAAC+TGG | + | chr3_2:61933509-61933528 | None:intergenic | 40.0% | |
| GATGGTGATTTCAGACTCTT+TGG | - | chr3_2:61933518-61933537 | Msa0415620:intron | 40.0% | |
| GACAGACATTACGTCATGTT+AGG | - | chr3_2:61933865-61933884 | Msa0415620:intron | 40.0% | |
| !! | CTTCTAAAGTTGTGCCAAGT+AGG | + | chr3_2:61934296-61934315 | None:intergenic | 40.0% |
| TTTAGAAGAGAAAGCTGTGG+TGG | - | chr3_2:61934308-61934327 | Msa0415620:intron | 40.0% | |
| TGAGCTATAGTTATGTCTCC+AGG | + | chr3_2:61934423-61934442 | None:intergenic | 40.0% | |
| TGCTTGATGTGTATGAACGT+AGG | - | chr3_2:61934469-61934488 | Msa0415620:intron | 40.0% | |
| TGCTGGTGATAAGTTCACTT+TGG | - | chr3_2:61934512-61934531 | Msa0415620:CDS | 40.0% | |
| TGGGACATTTGATTAGTGAG+AGG | - | chr3_2:61934586-61934605 | Msa0415620:CDS | 40.0% | |
| AGAGGAAGAATGTGAATGCT+TGG | - | chr3_2:61934604-61934623 | Msa0415620:CDS | 40.0% | |
| GAAGAATGTGAATGCTTGGT+GGG | - | chr3_2:61934608-61934627 | Msa0415620:CDS | 40.0% | |
| !! | GGTGGGAGAAAATTTCTAGT+AGG | - | chr3_2:61934625-61934644 | Msa0415620:CDS | 40.0% |
| TTAATGCAGCATGTCCTCAG+AGG | - | chr3_2:61932389-61932408 | Msa0415620:CDS | 45.0% | |
| TAATGCAGCATGTCCTCAGA+GGG | - | chr3_2:61932390-61932409 | Msa0415620:CDS | 45.0% | |
| GGCTTGCCTCTTAGAAAAAG+AGG | - | chr3_2:61932417-61932436 | Msa0415620:CDS | 45.0% | |
| TACTATGTTGGGTGTAGTGG+CGG | + | chr3_2:61933181-61933200 | None:intergenic | 45.0% | |
| TGGTCAAGTTCCAGTTGTAG+AGG | - | chr3_2:61933496-61933515 | Msa0415620:CDS | 45.0% | |
| CAAGTTCCAGTTGTAGAGGA+TGG | - | chr3_2:61933500-61933519 | Msa0415620:CDS | 45.0% | |
| !! | AAACCAAGAGAGAGCACCAA+TGG | - | chr3_2:61933705-61933724 | Msa0415620:intron | 45.0% |
| !! | AACCAAGAGAGAGCACCAAT+GGG | - | chr3_2:61933706-61933725 | Msa0415620:intron | 45.0% |
| !! | GTATCGATTAGGTACGGGTT+TGG | + | chr3_2:61933754-61933773 | None:intergenic | 45.0% |
| AAAGTTGTGCCAAGTAGGTC+AGG | + | chr3_2:61934291-61934310 | None:intergenic | 45.0% | |
| !! | AGAAAGCTGTGGTGGATCAA+TGG | - | chr3_2:61934316-61934335 | Msa0415620:intron | 45.0% |
| CTACCAAAAATGGGTAAGCC+TGG | - | chr3_2:61934402-61934421 | Msa0415620:intron | 45.0% | |
| ! | TCTCCAGGCTTACCCATTTT+TGG | + | chr3_2:61934408-61934427 | None:intergenic | 45.0% |
| CTTAGCCATCTTCCTGGAAT+TGG | - | chr3_2:61934540-61934559 | Msa0415620:CDS | 45.0% | |
| GATGTCCAATTCCAGGAAGA+TGG | + | chr3_2:61934548-61934567 | None:intergenic | 45.0% | |
| GGAAGAATGTGAATGCTTGG+TGG | - | chr3_2:61934607-61934626 | Msa0415620:CDS | 45.0% | |
| GTCAGCTTGGAAGAAGTTGA+AGG | - | chr3_2:61934647-61934666 | Msa0415620:exon | 45.0% | |
| TTAATGCAGCATGTCCTCAG+AGG | - | chr3_2:61932389-61932408 | Msa0415620:CDS | 45.0% | |
| TAATGCAGCATGTCCTCAGA+GGG | - | chr3_2:61932390-61932409 | Msa0415620:CDS | 45.0% | |
| GGCTTGCCTCTTAGAAAAAG+AGG | - | chr3_2:61932417-61932436 | Msa0415620:CDS | 45.0% | |
| TACTATGTTGGGTGTAGTGG+CGG | + | chr3_2:61933181-61933200 | None:intergenic | 45.0% | |
| TGGTCAAGTTCCAGTTGTAG+AGG | - | chr3_2:61933496-61933515 | Msa0415620:CDS | 45.0% | |
| CAAGTTCCAGTTGTAGAGGA+TGG | - | chr3_2:61933500-61933519 | Msa0415620:CDS | 45.0% | |
| !! | AAACCAAGAGAGAGCACCAA+TGG | - | chr3_2:61933705-61933724 | Msa0415620:intron | 45.0% |
| !! | AACCAAGAGAGAGCACCAAT+GGG | - | chr3_2:61933706-61933725 | Msa0415620:intron | 45.0% |
| !! | GTATCGATTAGGTACGGGTT+TGG | + | chr3_2:61933754-61933773 | None:intergenic | 45.0% |
| AAAGTTGTGCCAAGTAGGTC+AGG | + | chr3_2:61934291-61934310 | None:intergenic | 45.0% | |
| !! | AGAAAGCTGTGGTGGATCAA+TGG | - | chr3_2:61934316-61934335 | Msa0415620:intron | 45.0% |
| CTACCAAAAATGGGTAAGCC+TGG | - | chr3_2:61934402-61934421 | Msa0415620:intron | 45.0% | |
| ! | TCTCCAGGCTTACCCATTTT+TGG | + | chr3_2:61934408-61934427 | None:intergenic | 45.0% |
| CTTAGCCATCTTCCTGGAAT+TGG | - | chr3_2:61934540-61934559 | Msa0415620:CDS | 45.0% | |
| GATGTCCAATTCCAGGAAGA+TGG | + | chr3_2:61934548-61934567 | None:intergenic | 45.0% | |
| GGAAGAATGTGAATGCTTGG+TGG | - | chr3_2:61934607-61934626 | Msa0415620:CDS | 45.0% | |
| GTCAGCTTGGAAGAAGTTGA+AGG | - | chr3_2:61934647-61934666 | Msa0415620:exon | 45.0% | |
| !! | AAAAATATTATTGAATAAAA+AGG | + | chr3_2:61932567-61932586 | None:intergenic | 5.0% |
| !!! | TAAAAAATTACAAAAATTTT+GGG | + | chr3_2:61933014-61933033 | None:intergenic | 5.0% |
| !!! | ATAAAAAATTACAAAAATTT+TGG | + | chr3_2:61933015-61933034 | None:intergenic | 5.0% |
| !! | AAAAATATTATTGAATAAAA+AGG | + | chr3_2:61932567-61932586 | None:intergenic | 5.0% |
| !!! | TAAAAAATTACAAAAATTTT+GGG | + | chr3_2:61933014-61933033 | None:intergenic | 5.0% |
| !!! | ATAAAAAATTACAAAAATTT+TGG | + | chr3_2:61933015-61933034 | None:intergenic | 5.0% |
| !! | ACCAAGAGAGAGCACCAATG+GGG | - | chr3_2:61933707-61933726 | Msa0415620:intron | 50.0% |
| ! | TACGGGTTTGGTATCCCATG+TGG | + | chr3_2:61933742-61933761 | None:intergenic | 50.0% |
| GCTGATCTTAGCCATCTTCC+TGG | - | chr3_2:61934534-61934553 | Msa0415620:CDS | 50.0% | |
| !! | ACCAAGAGAGAGCACCAATG+GGG | - | chr3_2:61933707-61933726 | Msa0415620:intron | 50.0% |
| ! | TACGGGTTTGGTATCCCATG+TGG | + | chr3_2:61933742-61933761 | None:intergenic | 50.0% |
| GCTGATCTTAGCCATCTTCC+TGG | - | chr3_2:61934534-61934553 | Msa0415620:CDS | 50.0% | |
| AGCATGTCCTCAGAGGGTGA+TGG | - | chr3_2:61932396-61932415 | Msa0415620:CDS | 55.0% | |
| ACCTGAGTTCCTTCTCCTCC+AGG | - | chr3_2:61932489-61932508 | Msa0415620:CDS | 55.0% | |
| ACCTGGAGGAGAAGGAACTC+AGG | + | chr3_2:61932493-61932512 | None:intergenic | 55.0% | |
| GCATCCAAAGGGCGGTTTCA+AGG | - | chr3_2:61932972-61932991 | Msa0415620:intron | 55.0% | |
| !!! | ATTTTGGGGCAGAGGCTCAC+CGG | + | chr3_2:61932999-61933018 | None:intergenic | 55.0% |
| ! | TCCCCATTGGTGCTCTCTCT+TGG | + | chr3_2:61933711-61933730 | None:intergenic | 55.0% |
| GCAGCAAAGTATGCAGACCG+TGG | - | chr3_2:61934264-61934283 | Msa0415620:intron | 55.0% | |
| TGCCAAGTAGGTCAGGACCA+CGG | + | chr3_2:61934284-61934303 | None:intergenic | 55.0% | |
| AGCATGTCCTCAGAGGGTGA+TGG | - | chr3_2:61932396-61932415 | Msa0415620:CDS | 55.0% | |
| ACCTGAGTTCCTTCTCCTCC+AGG | - | chr3_2:61932489-61932508 | Msa0415620:CDS | 55.0% | |
| ACCTGGAGGAGAAGGAACTC+AGG | + | chr3_2:61932493-61932512 | None:intergenic | 55.0% | |
| GCATCCAAAGGGCGGTTTCA+AGG | - | chr3_2:61932972-61932991 | Msa0415620:intron | 55.0% | |
| !!! | ATTTTGGGGCAGAGGCTCAC+CGG | + | chr3_2:61932999-61933018 | None:intergenic | 55.0% |
| ! | TCCCCATTGGTGCTCTCTCT+TGG | + | chr3_2:61933711-61933730 | None:intergenic | 55.0% |
| GCAGCAAAGTATGCAGACCG+TGG | - | chr3_2:61934264-61934283 | Msa0415620:intron | 55.0% | |
| TGCCAAGTAGGTCAGGACCA+CGG | + | chr3_2:61934284-61934303 | None:intergenic | 55.0% | |
| AGGCAAGCCATCACCCTCTG+AGG | + | chr3_2:61932406-61932425 | None:intergenic | 60.0% | |
| CAAAGGGCGGTTTCAAGGCC+CGG | - | chr3_2:61932977-61932996 | Msa0415620:intron | 60.0% | |
| !!! | TTTTGGGGCAGAGGCTCACC+GGG | + | chr3_2:61932998-61933017 | None:intergenic | 60.0% |
| GAGCACCAATGGGGACGACA+TGG | - | chr3_2:61933716-61933735 | Msa0415620:intron | 60.0% | |
| TGTGGCCATGTCGTCCCCAT+TGG | + | chr3_2:61933724-61933743 | None:intergenic | 60.0% | |
| ATGGGGACGACATGGCCACA+TGG | - | chr3_2:61933724-61933743 | Msa0415620:intron | 60.0% | |
| TGGGGACGACATGGCCACAT+GGG | - | chr3_2:61933725-61933744 | Msa0415620:intron | 60.0% | |
| GACCGTGGTCCTGACCTACT+TGG | - | chr3_2:61934279-61934298 | Msa0415620:intron | 60.0% | |
| AGGCAAGCCATCACCCTCTG+AGG | + | chr3_2:61932406-61932425 | None:intergenic | 60.0% | |
| CAAAGGGCGGTTTCAAGGCC+CGG | - | chr3_2:61932977-61932996 | Msa0415620:intron | 60.0% | |
| !!! | TTTTGGGGCAGAGGCTCACC+GGG | + | chr3_2:61932998-61933017 | None:intergenic | 60.0% |
| GAGCACCAATGGGGACGACA+TGG | - | chr3_2:61933716-61933735 | Msa0415620:intron | 60.0% | |
| TGTGGCCATGTCGTCCCCAT+TGG | + | chr3_2:61933724-61933743 | None:intergenic | 60.0% | |
| ATGGGGACGACATGGCCACA+TGG | - | chr3_2:61933724-61933743 | Msa0415620:intron | 60.0% | |
| TGGGGACGACATGGCCACAT+GGG | - | chr3_2:61933725-61933744 | Msa0415620:intron | 60.0% | |
| GACCGTGGTCCTGACCTACT+TGG | - | chr3_2:61934279-61934298 | Msa0415620:intron | 60.0% | |
| CGGGCCTTGAAACCGCCCTT+TGG | + | chr3_2:61932979-61932998 | None:intergenic | 65.0% | |
| CGGGCCTTGAAACCGCCCTT+TGG | + | chr3_2:61932979-61932998 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 61932331 | 61934680 | 61932331 | ID=Msa0415620;Name=Msa0415620 |
| chr3_2 | mRNA | 61932331 | 61934680 | 61932331 | ID=Msa0415620-mRNA-1;Parent=Msa0415620;Name=Msa0415620-mRNA-1;_AED=0.02;_eAED=0.02;_QI=33|1|0.66|1|1|1|3|0|212 |
| chr3_2 | exon | 61932331 | 61932773 | 61932331 | ID=Msa0415620-mRNA-1:exon:13200;Parent=Msa0415620-mRNA-1 |
| chr3_2 | exon | 61933472 | 61933520 | 61933472 | ID=Msa0415620-mRNA-1:exon:13199;Parent=Msa0415620-mRNA-1 |
| chr3_2 | exon | 61934501 | 61934680 | 61934501 | ID=Msa0415620-mRNA-1:exon:13198;Parent=Msa0415620-mRNA-1 |
| chr3_2 | five_prime_UTR | 61934648 | 61934680 | 61934648 | ID=Msa0415620-mRNA-1:five_prime_utr;Parent=Msa0415620-mRNA-1 |
| chr3_2 | CDS | 61934501 | 61934647 | 61934501 | ID=Msa0415620-mRNA-1:cds;Parent=Msa0415620-mRNA-1 |
| chr3_2 | CDS | 61933472 | 61933520 | 61933472 | ID=Msa0415620-mRNA-1:cds;Parent=Msa0415620-mRNA-1 |
| chr3_2 | CDS | 61932331 | 61932773 | 61932331 | ID=Msa0415620-mRNA-1:cds;Parent=Msa0415620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
