Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371190 | XP_013461026.1 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371190 | sp|Q27GI3|NAT6_ARATH | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371190 | A0A072VA43 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0174440 | Msa0371190 | 0.808256 | 3.385762e-50 | -8.615850e-47 |
| Msa0180650 | Msa0371190 | 0.812399 | 4.323832e-51 | -8.615850e-47 |
| Msa0371190 | Msa0382740 | 0.805930 | 1.052276e-49 | -8.615850e-47 |
| Msa0371190 | Msa0382770 | 0.810143 | 1.334497e-50 | -8.615850e-47 |
| Msa0371190 | Msa0419450 | 0.934919 | 1.912719e-96 | -8.615850e-47 |
| Msa0371190 | Msa0525000 | 0.807139 | 5.847561e-50 | -8.615850e-47 |
| Msa0371190 | Msa0563940 | 0.822758 | 1.995987e-53 | -8.615850e-47 |
| Msa0270340 | Msa0371190 | 0.805056 | 1.604704e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371190 | MtrunA17_Chr3g0117941 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| Msa0371190 | MtrunA17_Chr4g0059331 | 90.602 | 532 | 50 | 0 | 1 | 532 | 1 | 532 | 0.0 | 991 |
| Msa0371190 | MtrunA17_Chr8g0364611 | 81.051 | 533 | 100 | 1 | 1 | 532 | 1 | 533 | 0.0 | 891 |
| Msa0371190 | MtrunA17_Chr5g0414131 | 76.236 | 526 | 124 | 1 | 8 | 532 | 13 | 538 | 0.0 | 837 |
| Msa0371190 | MtrunA17_Chr3g0134911 | 55.615 | 561 | 204 | 4 | 9 | 532 | 33 | 585 | 0.0 | 643 |
| Msa0371190 | MtrunA17_Chr1g0207021 | 59.280 | 528 | 212 | 2 | 4 | 531 | 2 | 526 | 0.0 | 641 |
| Msa0371190 | MtrunA17_Chr8g0379171 | 59.653 | 518 | 207 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| Msa0371190 | MtrunA17_Chr5g0405471 | 57.196 | 535 | 211 | 2 | 13 | 532 | 31 | 562 | 0.0 | 627 |
| Msa0371190 | MtrunA17_Chr2g0284061 | 58.238 | 522 | 216 | 1 | 9 | 530 | 3 | 522 | 0.0 | 625 |
| Msa0371190 | MtrunA17_Chr3g0119521 | 59.417 | 515 | 206 | 2 | 17 | 530 | 6 | 518 | 0.0 | 612 |
| Msa0371190 | MtrunA17_Chr1g0154001 | 52.632 | 513 | 241 | 1 | 19 | 531 | 36 | 546 | 0.0 | 536 |
| Msa0371190 | MtrunA17_Chr8g0367361 | 35.046 | 545 | 312 | 6 | 17 | 529 | 234 | 768 | 1.21e-107 | 338 |
| Msa0371190 | MtrunA17_Chr5g0412181 | 36.486 | 518 | 291 | 4 | 40 | 525 | 182 | 693 | 6.98e-104 | 327 |
| Msa0371190 | MtrunA17_Chr2g0320981 | 34.990 | 523 | 296 | 6 | 43 | 529 | 164 | 678 | 2.88e-94 | 301 |
| Msa0371190 | MtrunA17_Chr4g0027121 | 34.857 | 525 | 295 | 7 | 43 | 529 | 171 | 686 | 3.86e-93 | 298 |
| Msa0371190 | MtrunA17_Chr2g0332871 | 32.400 | 500 | 300 | 6 | 46 | 529 | 166 | 643 | 2.01e-83 | 272 |
| Msa0371190 | MtrunA17_Chr8g0379181 | 50.909 | 55 | 27 | 0 | 411 | 465 | 13 | 67 | 4.39e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0371190 | AT5G62890.1 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Msa0371190 | AT5G62890.2 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Msa0371190 | AT5G62890.3 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Msa0371190 | AT5G49990.2 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0371190 | AT5G49990.3 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0371190 | AT5G49990.1 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0371190 | AT5G49990.4 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0371190 | AT1G60030.1 | 76.952 | 525 | 121 | 0 | 8 | 532 | 14 | 538 | 0.0 | 851 |
| Msa0371190 | AT5G62890.4 | 85.652 | 460 | 66 | 0 | 1 | 460 | 1 | 460 | 0.0 | 810 |
| Msa0371190 | AT1G10540.1 | 68.587 | 538 | 162 | 3 | 1 | 531 | 1 | 538 | 0.0 | 777 |
| Msa0371190 | AT1G49960.1 | 61.111 | 522 | 203 | 0 | 10 | 531 | 4 | 525 | 0.0 | 649 |
| Msa0371190 | AT2G34190.1 | 58.880 | 518 | 211 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| Msa0371190 | AT1G65550.1 | 55.198 | 529 | 228 | 2 | 10 | 531 | 14 | 540 | 0.0 | 616 |
| Msa0371190 | AT2G05760.1 | 57.282 | 515 | 217 | 2 | 17 | 530 | 6 | 518 | 0.0 | 605 |
| Msa0371190 | AT1G10540.2 | 68.041 | 388 | 117 | 3 | 1 | 381 | 1 | 388 | 0.0 | 543 |
| Msa0371190 | AT2G26510.1 | 51.257 | 517 | 245 | 3 | 18 | 531 | 36 | 548 | 1.74e-180 | 519 |
| Msa0371190 | AT5G25420.1 | 49.436 | 443 | 154 | 5 | 10 | 452 | 26 | 398 | 1.38e-143 | 420 |
| Msa0371190 | AT2G26510.3 | 52.861 | 367 | 167 | 2 | 18 | 381 | 36 | 399 | 1.98e-126 | 376 |
| Msa0371190 | AT2G26510.2 | 52.260 | 354 | 163 | 2 | 18 | 368 | 36 | 386 | 6.28e-120 | 360 |
| Msa0371190 | AT2G27810.1 | 35.509 | 521 | 297 | 5 | 43 | 529 | 186 | 701 | 7.11e-93 | 298 |
| Msa0371190 | AT4G38050.1 | 35.249 | 522 | 300 | 5 | 40 | 529 | 189 | 704 | 2.34e-92 | 297 |
| Msa0371190 | AT2G27810.4 | 34.312 | 545 | 295 | 7 | 43 | 529 | 186 | 725 | 3.43e-88 | 287 |
| Msa0371190 | AT2G27810.2 | 39.012 | 405 | 228 | 3 | 43 | 429 | 186 | 589 | 1.04e-78 | 258 |
| Msa0371190 | AT2G27810.3 | 39.106 | 358 | 199 | 3 | 43 | 382 | 186 | 542 | 5.15e-68 | 229 |
Find 154 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCACTGTGTAGGAAAATT+TGG | 0.153225 | 3_1:-69298757 | Msa0371190:intron |
| TTGGTTTCTCTTGTTGGTTT+TGG | 0.211154 | 3_1:-69301158 | Msa0371190:CDS |
| GTTCCATTGGTTTCTCTTGT+TGG | 0.266604 | 3_1:-69301164 | Msa0371190:CDS |
| ATTAGGCTTCTCTATATTCT+TGG | 0.267261 | 3_1:-69298499 | Msa0371190:CDS |
| CAGAGAAAATGCTGGTCTTT+TGG | 0.280229 | 3_1:-69298945 | Msa0371190:CDS |
| TCACGATTACCTGCTGTAAT+TGG | 0.288965 | 3_1:-69301896 | Msa0371190:CDS |
| TTACATTTCCACCTCCCATC+TGG | 0.304347 | 3_1:+69302082 | None:intergenic |
| GGGGTCGGCATTCTTCTATC+TGG | 0.306602 | 3_1:-69299100 | Msa0371190:CDS |
| GCAGCTGAGGCCATACTTCT+TGG | 0.316014 | 3_1:-69302165 | Msa0371190:intron |
| TTTAGAACAAAGTTCATATT+AGG | 0.323198 | 3_1:-69298516 | Msa0371190:CDS |
| ACGTTGGTGCAAACACTCTT+TGG | 0.344409 | 3_1:-69301920 | Msa0371190:CDS |
| GAGCTTTCATTGCTGTATAT+AGG | 0.350680 | 3_1:-69299339 | Msa0371190:CDS |
| ATTCTTCTATCTGGATTGTT+TGG | 0.351515 | 3_1:-69299091 | Msa0371190:CDS |
| GTGCCACATGTGTTGCATTC+GGG | 0.351702 | 3_1:-69300816 | Msa0371190:CDS |
| TGCCTATTCTTTGCTTATGT+TGG | 0.351940 | 3_1:-69298688 | Msa0371190:intron |
| TTAGGCTTCTCTATATTCTT+GGG | 0.353632 | 3_1:-69298498 | Msa0371190:CDS |
| GCCACCTTCTATTCTTAGTC+GGG | 0.361786 | 3_1:-69299296 | Msa0371190:CDS |
| TACTAGGCTTTAGTGGCCTT+TGG | 0.362108 | 3_1:-69301452 | Msa0371190:CDS |
| GTAAATTCTGTTCAAGAAAG+TGG | 0.364812 | 3_1:-69297801 | Msa0371190:three_prime_UTR |
| TATACAGCAATCAATGGTTA+TGG | 0.366024 | 3_1:-69298447 | Msa0371190:CDS |
| GGATTGTTTGGAACAATTAG+TGG | 0.368917 | 3_1:-69299079 | Msa0371190:CDS |
| CAAATAGTACTAGGCTTTAG+TGG | 0.377969 | 3_1:-69301459 | Msa0371190:CDS |
| CAATCAAAAGCATTTGTTGC+GGG | 0.379620 | 3_1:-69298162 | Msa0371190:CDS |
| GCTCCCCATTGAAAGGGATA+TGG | 0.382055 | 3_1:+69300080 | None:intergenic |
| AAGCAGAGTTTCAATTACTT+TGG | 0.386238 | 3_1:+69301961 | None:intergenic |
| TAGACAACACTTTACATAAG+AGG | 0.388088 | 3_1:-69298122 | Msa0371190:CDS |
| TACATGACAGTTCAATGATA+TGG | 0.389315 | 3_1:-69298199 | Msa0371190:intron |
| CACTGCTCTTGTTCCCCAGA+TGG | 0.393055 | 3_1:-69302097 | Msa0371190:CDS |
| GAAGATAATGAGGGCAGTCC+AGG | 0.395646 | 3_1:-69301508 | Msa0371190:CDS |
| ATATTTGGTAGTTGATCCTT+TGG | 0.395677 | 3_1:+69303146 | None:intergenic |
| TCTATTCTTAGTCGGGGTAT+TGG | 0.399112 | 3_1:-69299289 | Msa0371190:CDS |
| GTAATGCAGTAAGAAATATT+TGG | 0.403847 | 3_1:+69303131 | None:intergenic |
| ACTTTGTTCTAAAACTGTTA+AGG | 0.406816 | 3_1:+69298526 | None:intergenic |
| ATGTTGAAATCCAAGAAGTA+TGG | 0.411526 | 3_1:+69302155 | None:intergenic |
| TCCTTTGGTGGATGTGGTTG+TGG | 0.413545 | 3_1:+69303161 | None:intergenic |
| TACAATGCAGCAATAATTGC+AGG | 0.417508 | 3_1:+69298712 | None:intergenic |
| GATAATGCATTGCTTGATCA+TGG | 0.420292 | 3_1:+69297708 | None:intergenic |
| TTTCGGCGGAGAACCGTTAT+AGG | 0.420761 | 3_1:+69300710 | None:intergenic |
| GACTTATAGATGCTGCTCCT+TGG | 0.435416 | 3_1:-69300656 | Msa0371190:intron |
| ACTGCCAGAGCTTATATTGC+TGG | 0.435476 | 3_1:-69301001 | Msa0371190:CDS |
| TGCCACCTTCTATTCTTAGT+CGG | 0.437110 | 3_1:-69299297 | Msa0371190:CDS |
| GAGTTCCATATCCCTTTCAA+TGG | 0.440675 | 3_1:-69300085 | Msa0371190:CDS |
| TCCACTTTCAGCTGTTCCAT+TGG | 0.444367 | 3_1:-69301177 | Msa0371190:CDS |
| TTGTTGCTTGCAGGCGGAGA+AGG | 0.444678 | 3_1:-69301984 | Msa0371190:intron |
| TACATTTCCACCTCCCATCT+GGG | 0.450062 | 3_1:+69302083 | None:intergenic |
| AAATATTTGTTTAGATTGAA+AGG | 0.450377 | 3_1:+69298006 | None:intergenic |
| TAGTCGGGGTATTGGTTGGC+AGG | 0.453343 | 3_1:-69299281 | Msa0371190:intron |
| GCTGTTCTACTCACTGTTGG+AGG | 0.454047 | 3_1:-69300735 | Msa0371190:CDS |
| CATCTTCCACCTGTGTGGAC+TGG | 0.457011 | 3_1:+69298423 | None:intergenic |
| TCAACTCTTCAAATAGTACT+AGG | 0.457439 | 3_1:-69301468 | Msa0371190:CDS |
| AGTTGATCCTTTGGTGGATG+TGG | 0.457879 | 3_1:+69303155 | None:intergenic |
| CTGTTCTACTCACTGTTGGA+GGG | 0.460539 | 3_1:-69300734 | Msa0371190:CDS |
| TAAGAATAGAAGGTGGCAAT+GGG | 0.462513 | 3_1:+69299302 | None:intergenic |
| GATAAGACCTCAATCGGATC+TGG | 0.463050 | 3_1:+69301809 | None:intergenic |
| TATTCTGATAAGACCTCAAT+CGG | 0.472143 | 3_1:+69301803 | None:intergenic |
| GAAGCTATGGCAGGAGGAGG+AGG | 0.475226 | 3_1:-69303206 | Msa0371190:exon |
| ACTGCTCTTGTTCCCCAGAT+GGG | 0.480801 | 3_1:-69302096 | Msa0371190:CDS |
| ATTGCTGGTATTCGTTTCAC+AGG | 0.486198 | 3_1:-69300986 | Msa0371190:intron |
| AGAGTTGTGCAGATATCTGC+TGG | 0.488720 | 3_1:-69298899 | Msa0371190:CDS |
| ATACCCCGACTAAGAATAGA+AGG | 0.488782 | 3_1:+69299292 | None:intergenic |
| TGTGCCACATGTGTTGCATT+CGG | 0.490071 | 3_1:-69300817 | Msa0371190:CDS |
| TACCAACATAAGCAAAGAAT+AGG | 0.490475 | 3_1:+69298686 | None:intergenic |
| TTCTTAGTCGGGGTATTGGT+TGG | 0.491475 | 3_1:-69299285 | Msa0371190:CDS |
| CAGTCCACACAGGTGGAAGA+TGG | 0.492027 | 3_1:-69298422 | Msa0371190:CDS |
| AGTTCCATATCCCTTTCAAT+GGG | 0.492360 | 3_1:-69300084 | Msa0371190:CDS |
| TAGAGTGGAGACTACTCATA+TGG | 0.492995 | 3_1:+69297872 | None:intergenic |
| GATCTGGTTCATTACTGAAT+CGG | 0.493059 | 3_1:+69301825 | None:intergenic |
| AATAATTGCAGGTGGGATAG+AGG | 0.496305 | 3_1:+69298723 | None:intergenic |
| CGATTACCTGCTGTAATTGG+AGG | 0.500960 | 3_1:-69301893 | Msa0371190:CDS |
| CTTGTTCCCCAGATGGGAGG+TGG | 0.502625 | 3_1:-69302090 | Msa0371190:CDS |
| AGAAATTCAAGAAGATAATG+AGG | 0.505728 | 3_1:-69301518 | Msa0371190:CDS |
| TATGCTGTTCTACTCACTGT+TGG | 0.507624 | 3_1:-69300738 | Msa0371190:CDS |
| AGAATAATTGAGATTGTCGT+TGG | 0.509692 | 3_1:+69301854 | None:intergenic |
| GGACAAGTACAAGTCATTCA+AGG | 0.513945 | 3_1:-69298061 | Msa0371190:CDS |
| TCCTGCCGCACTGATCGTGC+TGG | 0.513982 | 3_1:-69300678 | Msa0371190:CDS |
| ATACAGCAATCAATGGTTAT+GGG | 0.516393 | 3_1:-69298446 | Msa0371190:CDS |
| GAGGGATTCATCTATTAGAA+AGG | 0.518790 | 3_1:-69298103 | Msa0371190:CDS |
| TCCAGCACGATCAGTGCGGC+AGG | 0.522111 | 3_1:+69300677 | None:intergenic |
| TCATCATTTGCAGGTGCTGG+AGG | 0.523506 | 3_1:-69298573 | Msa0371190:intron |
| ATCTTTCGTTGCTCTTGTAG+AGG | 0.524901 | 3_1:-69300015 | Msa0371190:intron |
| TATTCACAATTGCAATTGTG+TGG | 0.525941 | 3_1:-69300764 | Msa0371190:CDS |
| TCTTATGTAAAGTGTTGTCT+AGG | 0.530549 | 3_1:+69298124 | None:intergenic |
| ACCAATGGAACAGCTGAAAG+TGG | 0.532981 | 3_1:+69301176 | None:intergenic |
| AGACAACACTTTACATAAGA+GGG | 0.533794 | 3_1:-69298121 | Msa0371190:CDS |
| ATAATGCATTGCTTGATCAT+GGG | 0.534620 | 3_1:+69297709 | None:intergenic |
| ACTGTTGGAGGGGCCTATAA+CGG | 0.535674 | 3_1:-69300723 | Msa0371190:CDS |
| TTAGATTAAGAAGCTATGGC+AGG | 0.535979 | 3_1:-69303215 | Msa0371190:exon |
| ATCTGGGGAACAAGAGCAGT+GGG | 0.536762 | 3_1:+69302099 | None:intergenic |
| AATGAGTATACAGCAATCAA+TGG | 0.538381 | 3_1:-69298453 | Msa0371190:CDS |
| TGTAGGTGCTCCCCATTGAA+AGG | 0.539040 | 3_1:+69300073 | None:intergenic |
| AGCATTTGTTGCGGGTGTTG+TGG | 0.545109 | 3_1:-69298154 | Msa0371190:CDS |
| TTTGGTAGTTGATCCTTTGG+TGG | 0.549747 | 3_1:+69303149 | None:intergenic |
| CCAATCAAAAGCATTTGTTG+CGG | 0.549945 | 3_1:-69298163 | Msa0371190:CDS |
| TGAGATTGTCGTTGGCACAT+AGG | 0.550121 | 3_1:+69301862 | None:intergenic |
| AGAGACTAACGCCATGGAGG+AGG | 0.558083 | 3_1:+69303104 | None:intergenic |
| TGCACAATTAATTAAACTGA+TGG | 0.560874 | 3_1:+69297982 | None:intergenic |
| GCCTTTGGCGTAATGTTGCA+AGG | 0.561053 | 3_1:-69301437 | Msa0371190:intron |
| AGTCCACACAGGTGGAAGAT+GGG | 0.561280 | 3_1:-69298421 | Msa0371190:intron |
| TTTCCGTGCAGAGAAAATGC+TGG | 0.562526 | 3_1:-69298953 | Msa0371190:intron |
| GCTTCACCTGCATCAAATGT+AGG | 0.563609 | 3_1:+69300056 | None:intergenic |
| TGTTCTACTCACTGTTGGAG+GGG | 0.564508 | 3_1:-69300733 | Msa0371190:CDS |
| CTAAGAATAGAAGGTGGCAA+TGG | 0.564521 | 3_1:+69299301 | None:intergenic |
| GTAGGTGCTCCCCATTGAAA+GGG | 0.565086 | 3_1:+69300074 | None:intergenic |
| AATACCAGCAATATAAGCTC+TGG | 0.566746 | 3_1:+69300997 | None:intergenic |
| AACGAAAGATGCCATCATCA+TGG | 0.570031 | 3_1:+69300028 | None:intergenic |
| ACAATCTCAATTATTCTCGC+TGG | 0.570834 | 3_1:-69301848 | Msa0371190:CDS |
| AATGCTATAAATTAATAGAG+TGG | 0.574867 | 3_1:+69297857 | None:intergenic |
| GCATTACCAGTCCTCCTCCA+TGG | 0.576989 | 3_1:-69303115 | Msa0371190:CDS |
| TAATGCATTGCTTGATCATG+GGG | 0.578366 | 3_1:+69297710 | None:intergenic |
| TAAGAAGCTATGGCAGGAGG+AGG | 0.579489 | 3_1:-69303209 | Msa0371190:exon |
| GGACAGAGGTAAACATTGGT+GGG | 0.579679 | 3_1:-69298082 | Msa0371190:CDS |
| GTTGCTAAATGTGTAGAGAT+CGG | 0.580682 | 3_1:-69301024 | Msa0371190:CDS |
| GATTAAGAAGCTATGGCAGG+AGG | 0.583299 | 3_1:-69303212 | Msa0371190:exon |
| TAAGACCCTCCAATTACAGC+AGG | 0.584548 | 3_1:+69301887 | None:intergenic |
| AACAGAATTTACAGAAACAA+GGG | 0.585609 | 3_1:+69297812 | None:intergenic |
| GAACAGAATTTACAGAAACA+AGG | 0.587785 | 3_1:+69297811 | None:intergenic |
| CTAACGCCATGGAGGAGGAC+TGG | 0.591951 | 3_1:+69303109 | None:intergenic |
| GCTCTTGTTCCCCAGATGGG+AGG | 0.592765 | 3_1:-69302093 | Msa0371190:CDS |
| GGAGCACCTACATTTGATGC+AGG | 0.597456 | 3_1:-69300062 | Msa0371190:CDS |
| AGGACAGAGGTAAACATTGG+TGG | 0.598302 | 3_1:-69298083 | Msa0371190:CDS |
| AAACCAACAAGAGAAACCAA+TGG | 0.606011 | 3_1:+69301161 | None:intergenic |
| CTGATATTAGAACTAGACTC+TGG | 0.607375 | 3_1:+69297923 | None:intergenic |
| GAAAGGACAGAGGTAAACAT+TGG | 0.607406 | 3_1:-69298086 | Msa0371190:CDS |
| TAATGAACCAGATCCGATTG+AGG | 0.607552 | 3_1:-69301816 | Msa0371190:intron |
| AAGATAATGAGGGCAGTCCA+GGG | 0.610018 | 3_1:-69301507 | Msa0371190:CDS |
| TTCCCCGAATGCAACACATG+TGG | 0.613775 | 3_1:+69300813 | None:intergenic |
| GAAATTCAAGAAGATAATGA+GGG | 0.618663 | 3_1:-69301517 | Msa0371190:CDS |
| GATTACCTGCTGTAATTGGA+GGG | 0.619577 | 3_1:-69301892 | Msa0371190:CDS |
| CCACCTTCTATTCTTAGTCG+GGG | 0.624455 | 3_1:-69299295 | Msa0371190:CDS |
| ACCTTGCAACATTACGCCAA+AGG | 0.624889 | 3_1:+69301436 | None:intergenic |
| TGAAGCGTTTGCCATGATGA+TGG | 0.627311 | 3_1:-69300039 | Msa0371190:CDS |
| AATGCAGCAATAATTGCAGG+TGG | 0.627398 | 3_1:+69298715 | None:intergenic |
| ACATTTCCACCTCCCATCTG+GGG | 0.633472 | 3_1:+69302084 | None:intergenic |
| ATACCCATCTTCCACCTGTG+TGG | 0.636689 | 3_1:+69298418 | None:intergenic |
| TATGGGCCAGTCCACACAGG+TGG | 0.641196 | 3_1:-69298429 | Msa0371190:CDS |
| CATCTGGGGAACAAGAGCAG+TGG | 0.642369 | 3_1:+69302098 | None:intergenic |
| GACAAGTACAAGTCATTCAA+GGG | 0.644339 | 3_1:-69298060 | Msa0371190:CDS |
| ACCACAACCACATCCACCAA+AGG | 0.644503 | 3_1:-69303162 | Msa0371190:CDS |
| TACAGCAATGAAAGCTCCAG+TGG | 0.645288 | 3_1:+69299345 | None:intergenic |
| TGCCACATGTGTTGCATTCG+GGG | 0.648656 | 3_1:-69300815 | Msa0371190:CDS |
| TGTTGCTGGTATTAACACGT+TGG | 0.653324 | 3_1:-69301936 | Msa0371190:CDS |
| GGTTATGGGCCAGTCCACAC+AGG | 0.660679 | 3_1:-69298432 | Msa0371190:CDS |
| ACAAGAGCGATAAGATAAAG+CGG | 0.662208 | 3_1:-69297957 | Msa0371190:three_prime_UTR |
| CAAGGGTGACACAAGAAGTG+AGG | 0.668674 | 3_1:-69298043 | Msa0371190:CDS |
| GTTTCAGTCTTACACAGACA+CGG | 0.669427 | 3_1:+69299051 | None:intergenic |
| ATGCAGCAATAATTGCAGGT+GGG | 0.674682 | 3_1:+69298716 | None:intergenic |
| AAAAGAGACTAACGCCATGG+AGG | 0.703335 | 3_1:+69303101 | None:intergenic |
| AAGCAACAATAAGAGCACCC+TGG | 0.705283 | 3_1:+69301490 | None:intergenic |
| AAGAATAGAAGGTGGCAATG+GGG | 0.708313 | 3_1:+69299303 | None:intergenic |
| GTATACTCATTGAAGTACTG+TGG | 0.710895 | 3_1:+69298465 | None:intergenic |
| GTTCCATATCCCTTTCAATG+GGG | 0.722732 | 3_1:-69300083 | Msa0371190:CDS |
| CCCCGACTAAGAATAGAAGG+TGG | 0.728889 | 3_1:+69299295 | None:intergenic |
| TCATCTATTAGAAAGGACAG+AGG | 0.737260 | 3_1:-69298096 | Msa0371190:CDS |
| TAAGTCCAGCACGATCAGTG+CGG | 0.740720 | 3_1:+69300673 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTGATTAAAATAAAATAAA+GGG | - | chr3_1:69298099-69298118 | Msa0371190:CDS | 10.0% |
| !!! | TTGAGATTTTATTATTTTTT+TGG | - | chr3_1:69298212-69298231 | Msa0371190:intron | 10.0% |
| !! | ATATTAAATTAGAATATGTT+TGG | + | chr3_1:69298631-69298650 | None:intergenic | 10.0% |
| !!! | TATTTTATATTCTATTCAAT+TGG | - | chr3_1:69301563-69301582 | Msa0371190:intron | 10.0% |
| !! | ATAAATGATAATCATAATAA+TGG | - | chr3_1:69301880-69301899 | Msa0371190:CDS | 10.0% |
| !! | GGTTGATTAAAATAAAATAA+AGG | - | chr3_1:69298098-69298117 | Msa0371190:CDS | 15.0% |
| !!! | TATTTTTTACTTTATGTCAT+TGG | - | chr3_1:69298160-69298179 | Msa0371190:CDS | 15.0% |
| !!! | ATTTTTAATACAGCTTATTT+GGG | + | chr3_1:69299101-69299120 | None:intergenic | 15.0% |
| !!! | TATTTTTAATACAGCTTATT+TGG | + | chr3_1:69299102-69299121 | None:intergenic | 15.0% |
| !! | ATCAAATAACTACAAATTTA+AGG | + | chr3_1:69299513-69299532 | None:intergenic | 15.0% |
| !! | TAAATTTGTAGTTATTTGAT+TGG | - | chr3_1:69299513-69299532 | Msa0371190:intron | 15.0% |
| !! | GAAAATAAAGCAAAAAAAAA+AGG | + | chr3_1:69299565-69299584 | None:intergenic | 15.0% |
| !!! | TTTACTGAATACAATTTTTT+TGG | + | chr3_1:69299839-69299858 | None:intergenic | 15.0% |
| !!! | TCTTTGTTCTTTTAATATTA+TGG | - | chr3_1:69300226-69300245 | Msa0371190:intron | 15.0% |
| !!! | AAATGAATAAATTTAAAGCT+TGG | - | chr3_1:69300641-69300660 | Msa0371190:intron | 15.0% |
| !!! | TTTTTTTTTTTTGCCTTTAT+TGG | - | chr3_1:69300770-69300789 | Msa0371190:CDS | 15.0% |
| !!! | TTTTTTTTTTTGCCTTTATT+GGG | - | chr3_1:69300771-69300790 | Msa0371190:CDS | 15.0% |
| !! | TTAAAAAAGAGAAAATCATA+AGG | + | chr3_1:69301132-69301151 | None:intergenic | 15.0% |
| !!! | TGATTTTCTCTTTTTTAAAT+TGG | - | chr3_1:69301134-69301153 | Msa0371190:CDS | 15.0% |
| !!! | GATTGATTATTTTTATAAGA+GGG | + | chr3_1:69301351-69301370 | None:intergenic | 15.0% |
| !!! | TGATTGATTATTTTTATAAG+AGG | + | chr3_1:69301352-69301371 | None:intergenic | 15.0% |
| !! | ATATATATAATAGTACTGTA+AGG | - | chr3_1:69301524-69301543 | Msa0371190:intron | 15.0% |
| !! | TTTAACTATATAACTTGAAA+AGG | + | chr3_1:69301616-69301635 | None:intergenic | 15.0% |
| !! | CAATTTCATTTATATAAACA+AGG | + | chr3_1:69302129-69302148 | None:intergenic | 15.0% |
| !! | CTTGTTTATATAAATGAAAT+TGG | - | chr3_1:69302127-69302146 | Msa0371190:CDS | 15.0% |
| !! | AAATATTTGTTTAGATTGAA+AGG | + | chr3_1:69303109-69303128 | None:intergenic | 15.0% |
| !! | ATTCTCATTCATTATTTGTA+AGG | - | chr3_1:69297768-69297787 | Msa0371190:three_prime_UTR | 20.0% |
| !! | AACTATTATCTTCTTCATTA+AGG | - | chr3_1:69297799-69297818 | Msa0371190:three_prime_UTR | 20.0% |
| !!! | TTAATTATGCATTGATATCA+AGG | - | chr3_1:69298254-69298273 | Msa0371190:intron | 20.0% |
| !! | ATTACATGATAAAACAACTT+TGG | + | chr3_1:69298331-69298350 | None:intergenic | 20.0% |
| !! | AGCTTAAGTATAATCAATTA+TGG | - | chr3_1:69298525-69298544 | Msa0371190:CDS | 20.0% |
| !!! | TATTCTGGTTGTTTTATTTT+TGG | - | chr3_1:69298694-69298713 | Msa0371190:CDS | 20.0% |
| !!! | ATTCTGGTTGTTTTATTTTT+GGG | - | chr3_1:69298695-69298714 | Msa0371190:CDS | 20.0% |
| !! | ACACAAATTAGAAATAATCA+AGG | + | chr3_1:69298815-69298834 | None:intergenic | 20.0% |
| !! | AACTAATTTGATGAGAAATA+TGG | - | chr3_1:69298912-69298931 | Msa0371190:CDS | 20.0% |
| !! | ACTAATTTGATGAGAAATAT+GGG | - | chr3_1:69298913-69298932 | Msa0371190:CDS | 20.0% |
| !!! | AAATTCCTTTTTCAAATCTT+TGG | - | chr3_1:69299857-69299876 | Msa0371190:intron | 20.0% |
| !! | TTGTGAATAAAACAGAAAAA+CGG | + | chr3_1:69300337-69300356 | None:intergenic | 20.0% |
| !! | GATTTGAAAAAAGAGAAAAT+TGG | + | chr3_1:69300695-69300714 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGCCTTTATTG+GGG | - | chr3_1:69300772-69300791 | Msa0371190:CDS | 20.0% |
| !!! | GAATGAGTTTTAAAAATTAC+TGG | - | chr3_1:69301392-69301411 | Msa0371190:intron | 20.0% |
| !!! | AGTTTTAAAAATTACTGGTA+AGG | - | chr3_1:69301397-69301416 | Msa0371190:intron | 20.0% |
| !!! | TTTAATCCTGAAAAAACTTT+TGG | - | chr3_1:69301429-69301448 | Msa0371190:intron | 20.0% |
| !!! | AAAAAACTTTTGGTAATTGT+TGG | - | chr3_1:69301439-69301458 | Msa0371190:CDS | 20.0% |
| !!! | AAAAACTTTTGGTAATTGTT+GGG | - | chr3_1:69301440-69301459 | Msa0371190:CDS | 20.0% |
| !!! | GAAAGTTTTACTTGATTTAT+AGG | + | chr3_1:69301948-69301967 | None:intergenic | 20.0% |
| !!! | ATGATTTTCTTTTCAATTCT+CGG | - | chr3_1:69302240-69302259 | Msa0371190:intron | 20.0% |
| !!! | ATTATATGCTGCTTATTTTA+AGG | + | chr3_1:69302505-69302524 | None:intergenic | 20.0% |
| !!! | TTTAGAACAAAGTTCATATT+AGG | - | chr3_1:69302596-69302615 | Msa0371190:intron | 20.0% |
| !!! | AAATATATTTTTTGCAGAGT+CGG | - | chr3_1:69302729-69302748 | Msa0371190:intron | 20.0% |
| !! | AATGCTATAAATTAATAGAG+TGG | + | chr3_1:69303258-69303277 | None:intergenic | 20.0% |
| ! | TGAAGAAGATAATAGTTACT+AGG | + | chr3_1:69297796-69297815 | None:intergenic | 25.0% |
| !!! | GTTTTTAGATTAAGAAGCTA+TGG | - | chr3_1:69297893-69297912 | Msa0371190:three_prime_UTR | 25.0% |
| ! | GTAATGCAGTAAGAAATATT+TGG | + | chr3_1:69297984-69298003 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTCTCTTAGATTC+TGG | - | chr3_1:69298031-69298050 | Msa0371190:CDS | 25.0% |
| ! | ATCTCTCATTATTCTTAATC+TGG | - | chr3_1:69298077-69298096 | Msa0371190:CDS | 25.0% |
| ! | TGCAAATAGAATCTCAAATT+AGG | + | chr3_1:69298187-69298206 | None:intergenic | 25.0% |
| !!! | TTCTGGTTGTTTTATTTTTG+GGG | - | chr3_1:69298696-69298715 | Msa0371190:CDS | 25.0% |
| ! | ATGTTTGAACAATGTTGTAA+AGG | - | chr3_1:69298744-69298763 | Msa0371190:CDS | 25.0% |
| !! | AAGGAATATGTCATTTGAAT+TGG | + | chr3_1:69298796-69298815 | None:intergenic | 25.0% |
| ! | CTAATTTGATGAGAAATATG+GGG | - | chr3_1:69298914-69298933 | Msa0371190:CDS | 25.0% |
| ! | TAACTATACTAAATGATGTG+TGG | - | chr3_1:69299334-69299353 | Msa0371190:CDS | 25.0% |
| !! | TTGCAAATCTTAGTCTATTT+TGG | + | chr3_1:69299406-69299425 | None:intergenic | 25.0% |
| ! | TTGGAGACACAATAAAAAAA+TGG | + | chr3_1:69299441-69299460 | None:intergenic | 25.0% |
| !!! | ACAAATTTAAGGTCTTATTG+TGG | + | chr3_1:69299502-69299521 | None:intergenic | 25.0% |
| ! | TATCTTCTTGAATTTCTGAA+TGG | + | chr3_1:69299591-69299610 | None:intergenic | 25.0% |
| ! | AGAAATTCAAGAAGATAATG+AGG | - | chr3_1:69299594-69299613 | Msa0371190:intron | 25.0% |
| ! | GAAATTCAAGAAGATAATGA+GGG | - | chr3_1:69299595-69299614 | Msa0371190:intron | 25.0% |
| !!! | AATTTTTTTGGCGAATATCA+TGG | + | chr3_1:69299827-69299846 | None:intergenic | 25.0% |
| ! | CTAATCCAAAGATTTGAAAA+AGG | + | chr3_1:69299865-69299884 | None:intergenic | 25.0% |
| ! | AAATCAAACTTACATCAGAT+TGG | + | chr3_1:69299897-69299916 | None:intergenic | 25.0% |
| ! | TAGAAACATTAAAAGACACT+AGG | + | chr3_1:69300176-69300195 | None:intergenic | 25.0% |
| ! | TCATTAAATTTAACCCTTGA+TGG | - | chr3_1:69300493-69300512 | Msa0371190:intron | 25.0% |
| ! | TTGACATGAAATAACAAGAA+TGG | + | chr3_1:69300717-69300736 | None:intergenic | 25.0% |
| !! | GCAATATATACTATTTTCAC+TGG | - | chr3_1:69300741-69300760 | Msa0371190:CDS | 25.0% |
| !!! | TATTCTGTCTTTGTTTTTTC+TGG | - | chr3_1:69301221-69301240 | Msa0371190:intron | 25.0% |
| !!! | CAATTACCAAAAGTTTTTTC+AGG | + | chr3_1:69301438-69301457 | None:intergenic | 25.0% |
| ! | TTATATTCTATTCAATTGGC+AGG | - | chr3_1:69301567-69301586 | Msa0371190:intron | 25.0% |
| ! | TATATTCTATTCAATTGGCA+GGG | - | chr3_1:69301568-69301587 | Msa0371190:intron | 25.0% |
| ! | AATGTTGGCAATTAGTAAAA+GGG | + | chr3_1:69302333-69302352 | None:intergenic | 25.0% |
| ! | AAATGTTGGCAATTAGTAAA+AGG | + | chr3_1:69302334-69302353 | None:intergenic | 25.0% |
| ! | TGCAAATGATGAATGAAAAT+GGG | + | chr3_1:69302531-69302550 | None:intergenic | 25.0% |
| !!! | ACTTTGTTCTAAAACTGTTA+AGG | + | chr3_1:69302589-69302608 | None:intergenic | 25.0% |
| ! | TGCACAATTAATTAAACTGA+TGG | + | chr3_1:69303133-69303152 | None:intergenic | 25.0% |
| ! | AACAGAATTTACAGAAACAA+GGG | + | chr3_1:69303303-69303322 | None:intergenic | 25.0% |
| ! | ATATTTGGTAGTTGATCCTT+TGG | + | chr3_1:69297969-69297988 | None:intergenic | 30.0% |
| GTACAAGAACATTATCTGTT+TGG | - | chr3_1:69298121-69298140 | Msa0371190:CDS | 30.0% | |
| TTCTGGATCTAGAAAAAACT+GGG | + | chr3_1:69298285-69298304 | None:intergenic | 30.0% | |
| ATTCTGGATCTAGAAAAAAC+TGG | + | chr3_1:69298286-69298305 | None:intergenic | 30.0% | |
| !!! | AGTTTTTTCTAGATCCAGAA+TGG | - | chr3_1:69298285-69298304 | Msa0371190:intron | 30.0% |
| TGTAATCTTAAGTGTGTGTT+TGG | - | chr3_1:69298345-69298364 | Msa0371190:intron | 30.0% | |
| AAGGTAAAGTGATCTATGTT+TGG | - | chr3_1:69298422-69298441 | Msa0371190:CDS | 30.0% | |
| ACTCACTTTAACAATCATGA+GGG | + | chr3_1:69298451-69298470 | None:intergenic | 30.0% | |
| AACTCACTTTAACAATCATG+AGG | + | chr3_1:69298452-69298471 | None:intergenic | 30.0% | |
| ! | TGTTTGGTTTCATTTCTAGA+GGG | + | chr3_1:69298615-69298634 | None:intergenic | 30.0% |
| ! | ATGTTTGGTTTCATTTCTAG+AGG | + | chr3_1:69298616-69298635 | None:intergenic | 30.0% |
| GTAAAGGAATCTTGAGTAAT+TGG | - | chr3_1:69298760-69298779 | Msa0371190:intron | 30.0% | |
| GTGAATCAATACTAAGGAAA+AGG | + | chr3_1:69298866-69298885 | None:intergenic | 30.0% | |
| !! | TCCTTAGTATTGATTCACTT+TGG | - | chr3_1:69298868-69298887 | Msa0371190:intron | 30.0% |
| ACCAAAGTGAATCAATACTA+AGG | + | chr3_1:69298872-69298891 | None:intergenic | 30.0% | |
| ATGTTGAAATCCAAGAAGTA+TGG | + | chr3_1:69298960-69298979 | None:intergenic | 30.0% | |
| ! | CAACATTTTCTTGTAATGCT+TGG | - | chr3_1:69298974-69298993 | Msa0371190:intron | 30.0% |
| !! | GGCAAATTTTGATATGGAAA+TGG | - | chr3_1:69299058-69299077 | Msa0371190:intron | 30.0% |
| AAGCAGAGTTTCAATTACTT+TGG | + | chr3_1:69299154-69299173 | None:intergenic | 30.0% | |
| AGAATAATTGAGATTGTCGT+TGG | + | chr3_1:69299261-69299280 | None:intergenic | 30.0% | |
| TATTCTGATAAGACCTCAAT+CGG | + | chr3_1:69299312-69299331 | None:intergenic | 30.0% | |
| TCAACTCTTCAAATAGTACT+AGG | - | chr3_1:69299644-69299663 | Msa0371190:intron | 30.0% | |
| TGCAAATTTGCACAAATAGT+CGG | + | chr3_1:69299759-69299778 | None:intergenic | 30.0% | |
| TTACATCAGATTGGAACATT+TGG | + | chr3_1:69299888-69299907 | None:intergenic | 30.0% | |
| !!! | GTAAGTTTGATTTTTTCTGC+AGG | - | chr3_1:69299904-69299923 | Msa0371190:intron | 30.0% |
| ATCCATGAACTAAAATCACA+AGG | + | chr3_1:69300206-69300225 | None:intergenic | 30.0% | |
| TATTCACAATTGCAATTGTG+TGG | - | chr3_1:69300348-69300367 | Msa0371190:intron | 30.0% | |
| AATAGACAAAATGCCATCAA+GGG | + | chr3_1:69300509-69300528 | None:intergenic | 30.0% | |
| CAAGATCAAATATACAAGCA+TGG | + | chr3_1:69300559-69300578 | None:intergenic | 30.0% | |
| !! | TTTTAATTGGGTCCTTATCA+TGG | + | chr3_1:69300611-69300630 | None:intergenic | 30.0% |
| TCTATTATGTTTGTGCTCTA+AGG | + | chr3_1:69300874-69300893 | None:intergenic | 30.0% | |
| TTTCTCAAGAAAGATTCAGT+TGG | - | chr3_1:69300896-69300915 | Msa0371190:intron | 30.0% | |
| TCAAGAAAACCAATATCTCA+AGG | + | chr3_1:69300924-69300943 | None:intergenic | 30.0% | |
| !!! | TGAGATATTGGTTTTCTTGA+TGG | - | chr3_1:69300924-69300943 | Msa0371190:intron | 30.0% |
| !!! | CTCTTGTATTTTGAGTTTGT+AGG | - | chr3_1:69301000-69301019 | Msa0371190:CDS | 30.0% |
| !!! | TCTTTGTTTTTTCTGGAACT+GGG | - | chr3_1:69301228-69301247 | Msa0371190:intron | 30.0% |
| ATATTCTATTCAATTGGCAG+GGG | - | chr3_1:69301569-69301588 | Msa0371190:intron | 30.0% | |
| AAAACTTAGCCTACACATAA+TGG | - | chr3_1:69301633-69301652 | Msa0371190:intron | 30.0% | |
| TTCTACATGATCTCGTAATT+CGG | - | chr3_1:69301698-69301717 | Msa0371190:intron | 30.0% | |
| ! | CATCTGATTTATGCTTGTTA+GGG | - | chr3_1:69301991-69302010 | Msa0371190:intron | 30.0% |
| ! | ATCTGATTTATGCTTGTTAG+GGG | - | chr3_1:69301992-69302011 | Msa0371190:intron | 30.0% |
| ATTCTTCTATCTGGATTGTT+TGG | - | chr3_1:69302021-69302040 | Msa0371190:intron | 30.0% | |
| ATGTTGGCAATTAGTAAAAG+GGG | + | chr3_1:69302332-69302351 | None:intergenic | 30.0% | |
| TATCACTGTGTAGGAAAATT+TGG | - | chr3_1:69302355-69302374 | Msa0371190:intron | 30.0% | |
| TACCAACATAAGCAAAGAAT+AGG | + | chr3_1:69302429-69302448 | None:intergenic | 30.0% | |
| CTGCAAATGATGAATGAAAA+TGG | + | chr3_1:69302532-69302551 | None:intergenic | 30.0% | |
| ! | CATTTTCATTCATCATTTGC+AGG | - | chr3_1:69302530-69302549 | Msa0371190:intron | 30.0% |
| ATTAGGCTTCTCTATATTCT+TGG | - | chr3_1:69302613-69302632 | Msa0371190:intron | 30.0% | |
| TTAGGCTTCTCTATATTCTT+GGG | - | chr3_1:69302614-69302633 | Msa0371190:intron | 30.0% | |
| AATGAGTATACAGCAATCAA+TGG | - | chr3_1:69302659-69302678 | Msa0371190:intron | 30.0% | |
| TATACAGCAATCAATGGTTA+TGG | - | chr3_1:69302665-69302684 | Msa0371190:intron | 30.0% | |
| ATACAGCAATCAATGGTTAT+GGG | - | chr3_1:69302666-69302685 | Msa0371190:intron | 30.0% | |
| CAATGCATAAGAATTGAACT+AGG | - | chr3_1:69302847-69302866 | Msa0371190:intron | 30.0% | |
| ! | TTGAACTAGGATTTGTTCTT+TGG | - | chr3_1:69302860-69302879 | Msa0371190:intron | 30.0% |
| TACATGACAGTTCAATGATA+TGG | - | chr3_1:69302913-69302932 | Msa0371190:intron | 30.0% | |
| !! | CAAATGCTTTTGATTGGAAT+GGG | + | chr3_1:69302946-69302965 | None:intergenic | 30.0% |
| !! | ACAAATGCTTTTGATTGGAA+TGG | + | chr3_1:69302947-69302966 | None:intergenic | 30.0% |
| !! | TCTTATGTAAAGTGTTGTCT+AGG | + | chr3_1:69302991-69303010 | None:intergenic | 30.0% |
| TAGACAACACTTTACATAAG+AGG | - | chr3_1:69302990-69303009 | Msa0371190:intron | 30.0% | |
| AGACAACACTTTACATAAGA+GGG | - | chr3_1:69302991-69303010 | Msa0371190:intron | 30.0% | |
| GAACAGAATTTACAGAAACA+AGG | + | chr3_1:69303304-69303323 | None:intergenic | 30.0% | |
| GTAAATTCTGTTCAAGAAAG+TGG | - | chr3_1:69303311-69303330 | Msa0371190:intron | 30.0% | |
| ACGTGACAAAAATCAAATGA+AGG | + | chr3_1:69303367-69303386 | None:intergenic | 30.0% | |
| ATAATGCATTGCTTGATCAT+GGG | + | chr3_1:69303406-69303425 | None:intergenic | 30.0% | |
| TTAGATTAAGAAGCTATGGC+AGG | - | chr3_1:69297897-69297916 | Msa0371190:three_prime_UTR | 35.0% | |
| AAAAAAAGAGACTAACGCCA+TGG | + | chr3_1:69298017-69298036 | None:intergenic | 35.0% | |
| CAATCAAACTGTTTCCATTC+TGG | + | chr3_1:69298302-69298321 | None:intergenic | 35.0% | |
| ! | TGTAGCTAAAAGTGAGTTGA+AGG | - | chr3_1:69298403-69298422 | Msa0371190:intron | 35.0% |
| ! | GGGATCAAAATTGATTCTAG+AGG | + | chr3_1:69298595-69298614 | None:intergenic | 35.0% |
| TCAATACTAAGGAAAAGGAG+AGG | + | chr3_1:69298861-69298880 | None:intergenic | 35.0% | |
| !! | AGGACTGGCAAATTTTGATA+TGG | - | chr3_1:69299052-69299071 | Msa0371190:intron | 35.0% |
| ! | ATATTCCATTTGTTGCTTGC+AGG | - | chr3_1:69299119-69299138 | Msa0371190:intron | 35.0% |
| ACAATCTCAATTATTCTCGC+TGG | - | chr3_1:69299264-69299283 | Msa0371190:intron | 35.0% | |
| ! | GATCTGGTTCATTACTGAAT+CGG | + | chr3_1:69299290-69299309 | None:intergenic | 35.0% |
| !!! | AGTGTGTGATTGTTAGCTTT+TGG | + | chr3_1:69299460-69299479 | None:intergenic | 35.0% |
| GTTATTTGATTGGAACTGCT+AGG | - | chr3_1:69299523-69299542 | Msa0371190:intron | 35.0% | |
| ! | CAAATAGTACTAGGCTTTAG+TGG | - | chr3_1:69299653-69299672 | Msa0371190:intron | 35.0% |
| AATTTGCACAAATAGTCGGA+AGG | + | chr3_1:69299755-69299774 | None:intergenic | 35.0% | |
| AAACCAACAAGAGAAACCAA+TGG | + | chr3_1:69299954-69299973 | None:intergenic | 35.0% | |
| !!! | TTGGTTTCTCTTGTTGGTTT+TGG | - | chr3_1:69299954-69299973 | Msa0371190:intron | 35.0% |
| !!! | TGGTTTCTCTTGTTGGTTTT+GGG | - | chr3_1:69299955-69299974 | Msa0371190:intron | 35.0% |
| ! | TTGTACGAATTAGGTTTTCC+TGG | - | chr3_1:69299978-69299997 | Msa0371190:intron | 35.0% |
| ! | TGTACGAATTAGGTTTTCCT+GGG | - | chr3_1:69299979-69299998 | Msa0371190:intron | 35.0% |
| ATCCTTCGACTACATGTTTA+CGG | - | chr3_1:69300005-69300024 | Msa0371190:intron | 35.0% | |
| GTTGCTAAATGTGTAGAGAT+CGG | - | chr3_1:69300088-69300107 | Msa0371190:CDS | 35.0% | |
| AATACCAGCAATATAAGCTC+TGG | + | chr3_1:69300118-69300137 | None:intergenic | 35.0% | |
| TGAAATCACACAACTAACCA+AGG | + | chr3_1:69300476-69300495 | None:intergenic | 35.0% | |
| CAATAGACAAAATGCCATCA+AGG | + | chr3_1:69300510-69300529 | None:intergenic | 35.0% | |
| TCTTGCGATTTAAAAGCTTC+TGG | - | chr3_1:69300574-69300593 | Msa0371190:intron | 35.0% | |
| ! | TTGATGGCAATCTACTTTCT+AGG | - | chr3_1:69300940-69300959 | Msa0371190:intron | 35.0% |
| AGTTCCATATCCCTTTCAAT+GGG | - | chr3_1:69301028-69301047 | Msa0371190:intron | 35.0% | |
| !!! | GTCTTTGTTTTTTCTGGAAC+TGG | - | chr3_1:69301227-69301246 | Msa0371190:intron | 35.0% |
| ! | TTTTATCAGTGCATTGAAGC+TGG | - | chr3_1:69301251-69301270 | Msa0371190:intron | 35.0% |
| TAGTTTCATTGAAGTTCAGC+TGG | + | chr3_1:69301327-69301346 | None:intergenic | 35.0% | |
| !! | AACTGTTTCTATCTCTCTTG+AGG | + | chr3_1:69301493-69301512 | None:intergenic | 35.0% |
| ATAGTGACACCATTATGTGT+AGG | + | chr3_1:69301645-69301664 | None:intergenic | 35.0% | |
| CGGTTACATAGTTGCTAATT+TGG | - | chr3_1:69301718-69301737 | Msa0371190:intron | 35.0% | |
| GAGCTTTCATTGCTGTATAT+AGG | - | chr3_1:69301773-69301792 | Msa0371190:intron | 35.0% | |
| TAAGAATAGAAGGTGGCAAT+GGG | + | chr3_1:69301813-69301832 | None:intergenic | 35.0% | |
| AAGCATAAATCAGATGCATG+AGG | + | chr3_1:69301987-69302006 | None:intergenic | 35.0% | |
| GCATCTGATTTATGCTTGTT+AGG | - | chr3_1:69301990-69302009 | Msa0371190:intron | 35.0% | |
| ! | TCTGATTTATGCTTGTTAGG+GGG | - | chr3_1:69301993-69302012 | Msa0371190:intron | 35.0% |
| ! | GGATTGTTTGGAACAATTAG+TGG | - | chr3_1:69302033-69302052 | Msa0371190:intron | 35.0% |
| TAAAAGGGGAGAAATGTACT+CGG | + | chr3_1:69302318-69302337 | None:intergenic | 35.0% | |
| CTACACAGTGATAGAAATGT+TGG | + | chr3_1:69302348-69302367 | None:intergenic | 35.0% | |
| CAACATTTCTATCACTGTGT+AGG | - | chr3_1:69302346-69302365 | Msa0371190:intron | 35.0% | |
| TACAATGCAGCAATAATTGC+AGG | + | chr3_1:69302403-69302422 | None:intergenic | 35.0% | |
| TGCCTATTCTTTGCTTATGT+TGG | - | chr3_1:69302424-69302443 | Msa0371190:intron | 35.0% | |
| !!! | GCTGCTTATTTTAAGGATCA+TGG | + | chr3_1:69302498-69302517 | None:intergenic | 35.0% |
| !! | GTATACTCATTGAAGTACTG+TGG | + | chr3_1:69302650-69302669 | None:intergenic | 35.0% |
| !! | CCAATCAAAAGCATTTGTTG+CGG | - | chr3_1:69302949-69302968 | Msa0371190:intron | 35.0% |
| !! | CAATCAAAAGCATTTGTTGC+GGG | - | chr3_1:69302950-69302969 | Msa0371190:intron | 35.0% |
| GAGGGATTCATCTATTAGAA+AGG | - | chr3_1:69303009-69303028 | Msa0371190:intron | 35.0% | |
| TCATCTATTAGAAAGGACAG+AGG | - | chr3_1:69303016-69303035 | Msa0371190:intron | 35.0% | |
| GACAAGTACAAGTCATTCAA+GGG | - | chr3_1:69303052-69303071 | Msa0371190:intron | 35.0% | |
| ACAAGAGCGATAAGATAAAG+CGG | - | chr3_1:69303155-69303174 | Msa0371190:CDS | 35.0% | |
| CTGATATTAGAACTAGACTC+TGG | + | chr3_1:69303192-69303211 | None:intergenic | 35.0% | |
| TAATGCATTGCTTGATCATG+GGG | + | chr3_1:69303405-69303424 | None:intergenic | 35.0% | |
| GATAATGCATTGCTTGATCA+TGG | + | chr3_1:69303407-69303426 | None:intergenic | 35.0% | |
| ! | TGTGGTTCATCTGATTTTGC+TGG | + | chr3_1:69297936-69297955 | None:intergenic | 40.0% |
| ! | TTTGGTAGTTGATCCTTTGG+TGG | + | chr3_1:69297966-69297985 | None:intergenic | 40.0% |
| !!! | GAAACTCTGCTTTTTGTTGC+TGG | - | chr3_1:69299162-69299181 | Msa0371190:intron | 40.0% |
| TGTTGCTGGTATTAACACGT+TGG | - | chr3_1:69299176-69299195 | Msa0371190:intron | 40.0% | |
| TCACGATTACCTGCTGTAAT+TGG | - | chr3_1:69299216-69299235 | Msa0371190:intron | 40.0% | |
| GATTACCTGCTGTAATTGGA+GGG | - | chr3_1:69299220-69299239 | Msa0371190:intron | 40.0% | |
| TAATGAACCAGATCCGATTG+AGG | - | chr3_1:69299296-69299315 | Msa0371190:CDS | 40.0% | |
| GGTCTCACATTCTTACTAAG+TGG | - | chr3_1:69299700-69299719 | Msa0371190:intron | 40.0% | |
| !! | GTTCCATTGGTTTCTCTTGT+TGG | - | chr3_1:69299948-69299967 | Msa0371190:intron | 40.0% |
| !!! | GGTTTTGGGTTGTACGAATT+AGG | - | chr3_1:69299969-69299988 | Msa0371190:intron | 40.0% |
| ! | GTACGAATTAGGTTTTCCTG+GGG | - | chr3_1:69299980-69299999 | Msa0371190:intron | 40.0% |
| AACCGTAAACATGTAGTCGA+AGG | + | chr3_1:69300010-69300029 | None:intergenic | 40.0% | |
| TCAACATCGATGCTTGTGTT+GGG | - | chr3_1:69300060-69300079 | Msa0371190:CDS | 40.0% | |
| ATTGCTGGTATTCGTTTCAC+AGG | - | chr3_1:69300126-69300145 | Msa0371190:intron | 40.0% | |
| !!! | CGCCTTGTGATTTTAGTTCA+TGG | - | chr3_1:69300201-69300220 | Msa0371190:intron | 40.0% |
| TATGCTGTTCTACTCACTGT+TGG | - | chr3_1:69300374-69300393 | Msa0371190:intron | 40.0% | |
| GCGATTTAAAAGCTTCTGGT+TGG | - | chr3_1:69300578-69300597 | Msa0371190:intron | 40.0% | |
| GAGCAAAATCTCCCCAATAA+AGG | + | chr3_1:69300786-69300805 | None:intergenic | 40.0% | |
| CAGTTGGATCCTTGAGATAT+TGG | - | chr3_1:69300912-69300931 | Msa0371190:intron | 40.0% | |
| GAGTTCCATATCCCTTTCAA+TGG | - | chr3_1:69301027-69301046 | Msa0371190:CDS | 40.0% | |
| GTTCCATATCCCTTTCAATG+GGG | - | chr3_1:69301029-69301048 | Msa0371190:intron | 40.0% | |
| AACGAAAGATGCCATCATCA+TGG | + | chr3_1:69301087-69301106 | None:intergenic | 40.0% | |
| ATCTTTCGTTGCTCTTGTAG+AGG | - | chr3_1:69301097-69301116 | Msa0371190:intron | 40.0% | |
| TGTTGGGCGTTTGTCATAAA+TGG | - | chr3_1:69301456-69301475 | Msa0371190:CDS | 40.0% | |
| ! | TCTTTTTGTACACAGTCCAC+TGG | - | chr3_1:69301751-69301770 | Msa0371190:intron | 40.0% |
| AAGAATAGAAGGTGGCAATG+GGG | + | chr3_1:69301812-69301831 | None:intergenic | 40.0% | |
| CTAAGAATAGAAGGTGGCAA+TGG | + | chr3_1:69301814-69301833 | None:intergenic | 40.0% | |
| TGCCACCTTCTATTCTTAGT+CGG | - | chr3_1:69301815-69301834 | Msa0371190:intron | 40.0% | |
| ATACCCCGACTAAGAATAGA+AGG | + | chr3_1:69301823-69301842 | None:intergenic | 40.0% | |
| TCTATTCTTAGTCGGGGTAT+TGG | - | chr3_1:69301823-69301842 | Msa0371190:CDS | 40.0% | |
| ! | ATTTATGCTTGTTAGGGGGT+CGG | - | chr3_1:69301997-69302016 | Msa0371190:intron | 40.0% |
| GTTTCAGTCTTACACAGACA+CGG | + | chr3_1:69302064-69302083 | None:intergenic | 40.0% | |
| !!! | CAGAGAAAATGCTGGTCTTT+TGG | - | chr3_1:69302167-69302186 | Msa0371190:intron | 40.0% |
| AATAATTGCAGGTGGGATAG+AGG | + | chr3_1:69302392-69302411 | None:intergenic | 40.0% | |
| ATGCAGCAATAATTGCAGGT+GGG | + | chr3_1:69302399-69302418 | None:intergenic | 40.0% | |
| AATGCAGCAATAATTGCAGG+TGG | + | chr3_1:69302400-69302419 | None:intergenic | 40.0% | |
| ! | CCGCAACAAATGCTTTTGAT+TGG | + | chr3_1:69302952-69302971 | None:intergenic | 40.0% |
| GAAAGGACAGAGGTAAACAT+TGG | - | chr3_1:69303026-69303045 | Msa0371190:intron | 40.0% | |
| GGACAAGTACAAGTCATTCA+AGG | - | chr3_1:69303051-69303070 | Msa0371190:intron | 40.0% | |
| TAGAGTGGAGACTACTCATA+TGG | + | chr3_1:69303243-69303262 | None:intergenic | 40.0% | |
| GATTAAGAAGCTATGGCAGG+AGG | - | chr3_1:69297900-69297919 | Msa0371190:three_prime_UTR | 45.0% | |
| ! | AGTTGATCCTTTGGTGGATG+TGG | + | chr3_1:69297960-69297979 | None:intergenic | 45.0% |
| AAAAGAGACTAACGCCATGG+AGG | + | chr3_1:69298014-69298033 | None:intergenic | 45.0% | |
| ACTAAGGAAAAGGAGAGGCT+GGG | + | chr3_1:69298856-69298875 | None:intergenic | 45.0% | |
| TACTAAGGAAAAGGAGAGGC+TGG | + | chr3_1:69298857-69298876 | None:intergenic | 45.0% | |
| TACATTTCCACCTCCCATCT+GGG | + | chr3_1:69299032-69299051 | None:intergenic | 45.0% | |
| TTACATTTCCACCTCCCATC+TGG | + | chr3_1:69299033-69299052 | None:intergenic | 45.0% | |
| AGATGGGAGGTGGAAATGTA+AGG | - | chr3_1:69299032-69299051 | Msa0371190:intron | 45.0% | |
| ! | TTCCATTTGTTGCTTGCAGG+CGG | - | chr3_1:69299122-69299141 | Msa0371190:intron | 45.0% |
| ACGTTGGTGCAAACACTCTT+TGG | - | chr3_1:69299192-69299211 | Msa0371190:intron | 45.0% | |
| CGATTACCTGCTGTAATTGG+AGG | - | chr3_1:69299219-69299238 | Msa0371190:intron | 45.0% | |
| TAAGACCCTCCAATTACAGC+AGG | + | chr3_1:69299228-69299247 | None:intergenic | 45.0% | |
| TGAGATTGTCGTTGGCACAT+AGG | + | chr3_1:69299253-69299272 | None:intergenic | 45.0% | |
| GATAAGACCTCAATCGGATC+TGG | + | chr3_1:69299306-69299325 | None:intergenic | 45.0% | |
| AAGATAATGAGGGCAGTCCA+GGG | - | chr3_1:69299605-69299624 | Msa0371190:intron | 45.0% | |
| !! | AAGCAACAATAAGAGCACCC+TGG | + | chr3_1:69299625-69299644 | None:intergenic | 45.0% |
| ! | TACTAGGCTTTAGTGGCCTT+TGG | - | chr3_1:69299660-69299679 | Msa0371190:intron | 45.0% |
| ACCTTGCAACATTACGCCAA+AGG | + | chr3_1:69299679-69299698 | None:intergenic | 45.0% | |
| TTGGCGTAATGTTGCAAGGT+TGG | - | chr3_1:69299679-69299698 | Msa0371190:intron | 45.0% | |
| TCCACTTTCAGCTGTTCCAT+TGG | - | chr3_1:69299935-69299954 | Msa0371190:intron | 45.0% | |
| ACCAATGGAACAGCTGAAAG+TGG | + | chr3_1:69299939-69299958 | None:intergenic | 45.0% | |
| CTCAACATCGATGCTTGTGT+TGG | - | chr3_1:69300059-69300078 | Msa0371190:CDS | 45.0% | |
| ACTGCCAGAGCTTATATTGC+TGG | - | chr3_1:69300111-69300130 | Msa0371190:intron | 45.0% | |
| TGTGCCACATGTGTTGCATT+CGG | - | chr3_1:69300295-69300314 | Msa0371190:intron | 45.0% | |
| CTGTTCTACTCACTGTTGGA+GGG | - | chr3_1:69300378-69300397 | Msa0371190:intron | 45.0% | |
| TGTTCTACTCACTGTTGGAG+GGG | - | chr3_1:69300379-69300398 | Msa0371190:intron | 45.0% | |
| GACTTATAGATGCTGCTCCT+TGG | - | chr3_1:69300456-69300475 | Msa0371190:intron | 45.0% | |
| ATTGGGTCCTTATCATGGCA+GGG | + | chr3_1:69300606-69300625 | None:intergenic | 45.0% | |
| AATTGGGTCCTTATCATGGC+AGG | + | chr3_1:69300607-69300626 | None:intergenic | 45.0% | |
| ! | GGAGATTTTGCTCACTGAAG+TGG | - | chr3_1:69300793-69300812 | Msa0371190:CDS | 45.0% |
| GCTTCACCTGCATCAAATGT+AGG | + | chr3_1:69301059-69301078 | None:intergenic | 45.0% | |
| ! | TGAAGCGTTTGCCATGATGA+TGG | - | chr3_1:69301073-69301092 | Msa0371190:intron | 45.0% |
| TGAAGTTCAGCTGGCACAAA+AGG | + | chr3_1:69301318-69301337 | None:intergenic | 45.0% | |
| TTCTATTCAATTGGCAGGGG+CGG | - | chr3_1:69301572-69301591 | Msa0371190:intron | 45.0% | |
| TACAGCAATGAAAGCTCCAG+TGG | + | chr3_1:69301770-69301789 | None:intergenic | 45.0% | |
| GCCACCTTCTATTCTTAGTC+GGG | - | chr3_1:69301816-69301835 | Msa0371190:intron | 45.0% | |
| CCACCTTCTATTCTTAGTCG+GGG | - | chr3_1:69301817-69301836 | Msa0371190:CDS | 45.0% | |
| !! | TTCTTAGTCGGGGTATTGGT+TGG | - | chr3_1:69301827-69301846 | Msa0371190:CDS | 45.0% |
| TTTCCGTGCAGAGAAAATGC+TGG | - | chr3_1:69302159-69302178 | Msa0371190:CDS | 45.0% | |
| ! | AGACCAGCATTTTCTCTGCA+CGG | + | chr3_1:69302165-69302184 | None:intergenic | 45.0% |
| AGAGTTGTGCAGATATCTGC+TGG | - | chr3_1:69302213-69302232 | Msa0371190:intron | 45.0% | |
| CATTCATCATTTGCAGGTGC+TGG | - | chr3_1:69302536-69302555 | Msa0371190:intron | 45.0% | |
| AGGACAGAGGTAAACATTGG+TGG | - | chr3_1:69303029-69303048 | Msa0371190:intron | 45.0% | |
| GGACAGAGGTAAACATTGGT+GGG | - | chr3_1:69303030-69303049 | Msa0371190:intron | 45.0% | |
| !!! | ATTAATTTTTTTTTTTATTC+TGG | - | chr3_1:69298679-69298698 | Msa0371190:intron | 5.0% |
| !!! | TTTTAAATAAGTTTTTAATT+GGG | + | chr3_1:69300623-69300642 | None:intergenic | 5.0% |
| !!! | TTTTTAAATAAGTTTTTAAT+TGG | + | chr3_1:69300624-69300643 | None:intergenic | 5.0% |
| TAAGAAGCTATGGCAGGAGG+AGG | - | chr3_1:69297903-69297922 | Msa0371190:three_prime_UTR | 50.0% | |
| ACCACAACCACATCCACCAA+AGG | - | chr3_1:69297950-69297969 | Msa0371190:three_prime_UTR | 50.0% | |
| ! | TCCTTTGGTGGATGTGGTTG+TGG | + | chr3_1:69297954-69297973 | None:intergenic | 50.0% |
| !! | GGGACATTTTGATGCAGCTG+AGG | - | chr3_1:69298934-69298953 | Msa0371190:CDS | 50.0% |
| ATCTGGGGAACAAGAGCAGT+GGG | + | chr3_1:69299016-69299035 | None:intergenic | 50.0% | |
| ACTGCTCTTGTTCCCCAGAT+GGG | - | chr3_1:69299016-69299035 | Msa0371190:intron | 50.0% | |
| ACATTTCCACCTCCCATCTG+GGG | + | chr3_1:69299031-69299050 | None:intergenic | 50.0% | |
| GGAGGTGGAAATGTAAGGAC+TGG | - | chr3_1:69299037-69299056 | Msa0371190:intron | 50.0% | |
| GAAGATAATGAGGGCAGTCC+AGG | - | chr3_1:69299604-69299623 | Msa0371190:intron | 50.0% | |
| GCCTTTGGCGTAATGTTGCA+AGG | - | chr3_1:69299675-69299694 | Msa0371190:intron | 50.0% | |
| TGTAGTCGAAGGATTACCCC+AGG | + | chr3_1:69299999-69300018 | None:intergenic | 50.0% | |
| TCGATGCTTGTGTTGGGTGT+AGG | - | chr3_1:69300066-69300085 | Msa0371190:CDS | 50.0% | |
| GTGCCACATGTGTTGCATTC+GGG | - | chr3_1:69300296-69300315 | Msa0371190:intron | 50.0% | |
| TGCCACATGTGTTGCATTCG+GGG | - | chr3_1:69300297-69300316 | Msa0371190:intron | 50.0% | |
| TTCCCCGAATGCAACACATG+TGG | + | chr3_1:69300302-69300321 | None:intergenic | 50.0% | |
| GCTGTTCTACTCACTGTTGG+AGG | - | chr3_1:69300377-69300396 | Msa0371190:intron | 50.0% | |
| ACTGTTGGAGGGGCCTATAA+CGG | - | chr3_1:69300389-69300408 | Msa0371190:intron | 50.0% | |
| TTTCGGCGGAGAACCGTTAT+AGG | + | chr3_1:69300405-69300424 | None:intergenic | 50.0% | |
| ! | CAGGATGTCTGTGTTTTCGG+CGG | + | chr3_1:69300419-69300438 | None:intergenic | 50.0% |
| ! | CGGCAGGATGTCTGTGTTTT+CGG | + | chr3_1:69300422-69300441 | None:intergenic | 50.0% |
| TAAGTCCAGCACGATCAGTG+CGG | + | chr3_1:69300442-69300461 | None:intergenic | 50.0% | |
| TTGGGTCCTTATCATGGCAG+GGG | + | chr3_1:69300605-69300624 | None:intergenic | 50.0% | |
| GCTCCCCATTGAAAGGGATA+TGG | + | chr3_1:69301035-69301054 | None:intergenic | 50.0% | |
| GTAGGTGCTCCCCATTGAAA+GGG | + | chr3_1:69301041-69301060 | None:intergenic | 50.0% | |
| TGTAGGTGCTCCCCATTGAA+AGG | + | chr3_1:69301042-69301061 | None:intergenic | 50.0% | |
| ! | GGAGCACCTACATTTGATGC+AGG | - | chr3_1:69301050-69301069 | Msa0371190:intron | 50.0% |
| TCTATTCAATTGGCAGGGGC+GGG | - | chr3_1:69301573-69301592 | Msa0371190:intron | 50.0% | |
| CCCCGACTAAGAATAGAAGG+TGG | + | chr3_1:69301820-69301839 | None:intergenic | 50.0% | |
| !!! | CTTTTGGCTCTGACACGTGT+TGG | - | chr3_1:69302183-69302202 | Msa0371190:intron | 50.0% |
| GGGAGAAATGTACTCGGATG+TGG | + | chr3_1:69302312-69302331 | None:intergenic | 50.0% | |
| !! | TCATCATTTGCAGGTGCTGG+AGG | - | chr3_1:69302539-69302558 | Msa0371190:intron | 50.0% |
| ! | AGCATTTGTTGCGGGTGTTG+TGG | - | chr3_1:69302958-69302977 | Msa0371190:intron | 50.0% |
| CAAGGGTGACACAAGAAGTG+AGG | - | chr3_1:69303069-69303088 | Msa0371190:intron | 50.0% | |
| GCATTACCAGTCCTCCTCCA+TGG | - | chr3_1:69297997-69298016 | Msa0371190:CDS | 55.0% | |
| AGAGACTAACGCCATGGAGG+AGG | + | chr3_1:69298011-69298030 | None:intergenic | 55.0% | |
| GCAGCTGAGGCCATACTTCT+TGG | - | chr3_1:69298947-69298966 | Msa0371190:intron | 55.0% | |
| CATCTGGGGAACAAGAGCAG+TGG | + | chr3_1:69299017-69299036 | None:intergenic | 55.0% | |
| CACTGCTCTTGTTCCCCAGA+TGG | - | chr3_1:69299015-69299034 | Msa0371190:intron | 55.0% | |
| CTCCGCCTGCAAGCAACAAA+TGG | + | chr3_1:69299127-69299146 | None:intergenic | 55.0% | |
| ! | TTGTTGCTTGCAGGCGGAGA+AGG | - | chr3_1:69299128-69299147 | Msa0371190:intron | 55.0% |
| GTTGGTCCCCTGCCATGATA+AGG | - | chr3_1:69300596-69300615 | Msa0371190:intron | 55.0% | |
| CTATTCAATTGGCAGGGGCG+GGG | - | chr3_1:69301574-69301593 | Msa0371190:intron | 55.0% | |
| TATTCAATTGGCAGGGGCGG+GGG | - | chr3_1:69301575-69301594 | Msa0371190:intron | 55.0% | |
| !! | TAGTCGGGGTATTGGTTGGC+AGG | - | chr3_1:69301831-69301850 | Msa0371190:CDS | 55.0% |
| GGGGTCGGCATTCTTCTATC+TGG | - | chr3_1:69302012-69302031 | Msa0371190:intron | 55.0% | |
| GAAGCTATGGCAGGAGGAGG+AGG | - | chr3_1:69297906-69297925 | Msa0371190:three_prime_UTR | 60.0% | |
| CTAACGCCATGGAGGAGGAC+TGG | + | chr3_1:69298006-69298025 | None:intergenic | 60.0% | |
| GCTCTTGTTCCCCAGATGGG+AGG | - | chr3_1:69299019-69299038 | Msa0371190:intron | 60.0% | |
| CTTGTTCCCCAGATGGGAGG+TGG | - | chr3_1:69299022-69299041 | Msa0371190:intron | 60.0% | |
| GGTTATGGGCCAGTCCACAC+AGG | - | chr3_1:69302680-69302699 | Msa0371190:intron | 60.0% | |
| ! | TCCTGCCGCACTGATCGTGC+TGG | - | chr3_1:69300434-69300453 | Msa0371190:intron | 65.0% |
| TCCAGCACGATCAGTGCGGC+AGG | + | chr3_1:69300438-69300457 | None:intergenic | 65.0% | |
| AATTGGCAGGGGCGGGGGAT+TGG | - | chr3_1:69301580-69301599 | Msa0371190:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 69297704 | 69303430 | 69297704 | ID=Msa0371190;Name=Msa0371190 |
| chr3_1 | mRNA | 69297704 | 69303430 | 69297704 | ID=Msa0371190-mRNA-1;Parent=Msa0371190;Name=Msa0371190-mRNA-1;_AED=0.16;_eAED=0.16;_QI=101|1|1|1|0.92|0.86|15|289|532 |
| chr3_1 | exon | 69297704 | 69298211 | 69297704 | ID=Msa0371190-mRNA-1:exon:14775;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69298422 | 69298582 | 69298422 | ID=Msa0371190-mRNA-1:exon:14774;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69298689 | 69298766 | 69298689 | ID=Msa0371190-mRNA-1:exon:14773;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69298873 | 69298964 | 69298873 | ID=Msa0371190-mRNA-1:exon:14772;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69299064 | 69299122 | 69299064 | ID=Msa0371190-mRNA-1:exon:14771;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69299282 | 69299368 | 69299282 | ID=Msa0371190-mRNA-1:exon:14770;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69300016 | 69300112 | 69300016 | ID=Msa0371190-mRNA-1:exon:14769;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69300657 | 69300841 | 69300657 | ID=Msa0371190-mRNA-1:exon:14768;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69300987 | 69301046 | 69300987 | ID=Msa0371190-mRNA-1:exon:14767;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69301133 | 69301208 | 69301133 | ID=Msa0371190-mRNA-1:exon:14766;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69301438 | 69301538 | 69301438 | ID=Msa0371190-mRNA-1:exon:14765;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69301817 | 69301993 | 69301817 | ID=Msa0371190-mRNA-1:exon:14764;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69302086 | 69302183 | 69302086 | ID=Msa0371190-mRNA-1:exon:14763;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69303114 | 69303242 | 69303114 | ID=Msa0371190-mRNA-1:exon:14762;Parent=Msa0371190-mRNA-1 |
| chr3_1 | exon | 69303350 | 69303430 | 69303350 | ID=Msa0371190-mRNA-1:exon:14761;Parent=Msa0371190-mRNA-1 |
| chr3_1 | five_prime_UTR | 69303350 | 69303430 | 69303350 | ID=Msa0371190-mRNA-1:five_prime_utr;Parent=Msa0371190-mRNA-1 |
| chr3_1 | five_prime_UTR | 69303223 | 69303242 | 69303223 | ID=Msa0371190-mRNA-1:five_prime_utr;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69303114 | 69303222 | 69303114 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69302086 | 69302183 | 69302086 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69301817 | 69301993 | 69301817 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69301438 | 69301538 | 69301438 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69301133 | 69301208 | 69301133 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69300987 | 69301046 | 69300987 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69300657 | 69300841 | 69300657 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69300016 | 69300112 | 69300016 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69299282 | 69299368 | 69299282 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69299064 | 69299122 | 69299064 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69298873 | 69298964 | 69298873 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69298689 | 69298766 | 69298689 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69298422 | 69298582 | 69298422 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | CDS | 69297993 | 69298211 | 69297993 | ID=Msa0371190-mRNA-1:cds;Parent=Msa0371190-mRNA-1 |
| chr3_1 | three_prime_UTR | 69297704 | 69297992 | 69297704 | ID=Msa0371190-mRNA-1:three_prime_utr;Parent=Msa0371190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
