AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0174440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174440 MtrunA17_Chr1g0195111 96.908 1035 8 3 1 1035 1 1011 0.0 2065
Msa0174440 MtrunA17_Chr7g0271961 54.275 1041 401 19 13 1035 16 999 0.0 1041
Msa0174440 MtrunA17_Chr7g0269691 78.330 563 103 2 8 570 12 555 0.0 882
Msa0174440 MtrunA17_Chr3g0102921 48.909 871 361 21 23 844 41 876 0.0 738
Msa0174440 MtrunA17_Chr5g0447041 47.991 846 359 13 23 801 37 868 0.0 729
Msa0174440 MtrunA17_Chr7g0269681 76.923 468 98 4 570 1034 21 481 0.0 723
Msa0174440 MtrunA17_Chr1g0192481 72.664 428 108 5 355 779 3 424 0.0 636
Msa0174440 MtrunA17_Chr7g0257301 57.019 463 162 7 340 774 322 775 5.63e-166 516
Msa0174440 MtrunA17_Chr7g0257301 48.611 144 65 3 25 162 14 154 9.52e-33 137
Msa0174440 MtrunA17_Chr5g0411971 38.366 563 284 14 240 777 232 756 9.76e-104 349
Msa0174440 MtrunA17_Chr5g0421521 42.793 444 226 7 348 777 302 731 1.42e-102 344
Msa0174440 MtrunA17_Chr5g0421591 45.918 392 194 5 390 777 354 731 6.66e-102 340
Msa0174440 MtrunA17_Chr2g0312631 42.955 440 219 9 368 789 334 759 1.50e-100 340
Msa0174440 MtrunA17_Chr1g0191851 47.594 374 172 5 396 761 133 490 2.92e-100 333
Msa0174440 MtrunA17_Chr1g0192491 59.075 281 102 3 4 276 9 284 1.50e-99 315
Msa0174440 MtrunA17_Chr7g0272871 45.722 374 191 4 390 761 107 470 3.57e-94 315
Msa0174440 MtrunA17_Chr2g0319271 43.979 382 171 11 398 753 387 751 5.73e-87 296
Msa0174440 MtrunA17_Chr4g0042061 44.709 378 173 11 398 753 420 783 4.70e-85 292
Msa0174440 MtrunA17_Chr2g0280421 43.514 370 168 10 398 748 425 772 2.32e-84 290
Msa0174440 MtrunA17_Chr8g0386891 70.899 189 55 0 590 778 4 192 2.33e-83 276
Msa0174440 MtrunA17_Chr6g0484501 63.208 212 77 1 568 778 11 222 1.30e-76 251
Msa0174440 MtrunA17_Chr8g0386901 55.745 235 97 3 338 570 411 640 2.98e-76 264
Msa0174440 MtrunA17_Chr4g0049011 40.054 372 190 8 398 749 267 625 3.14e-76 263
Msa0174440 MtrunA17_Chr5g0407791 38.557 402 231 7 374 773 853 1240 2.66e-74 268
Msa0174440 MtrunA17_Chr6g0484511 52.679 224 100 2 348 570 227 445 1.41e-73 252
Msa0174440 MtrunA17_Chr8g0369881 39.084 371 211 5 374 742 839 1196 3.66e-71 258
Msa0174440 MtrunA17_Chr8g0390981 51.681 238 108 3 348 583 453 685 6.58e-70 247
Msa0174440 MtrunA17_Chr8g0390991 65.079 189 63 1 590 778 4 189 1.04e-68 240
Msa0174440 MtrunA17_Chr1g0191181 41.828 361 187 9 391 743 69 414 1.77e-65 233
Msa0174440 MtrunA17_Chr4g0069141 36.321 424 209 14 415 801 153 552 4.73e-59 222
Msa0174440 MtrunA17_Chr4g0045381 38.947 380 202 12 412 771 190 559 1.85e-58 221
Msa0174440 MtrunA17_Chr2g0322291 40.263 380 193 13 415 772 88 455 4.08e-58 219
Msa0174440 MtrunA17_Chr3g0122121 37.783 397 206 12 416 786 99 480 7.18e-58 218
Msa0174440 MtrunA17_Chr3g0132921 32.668 401 231 8 413 782 7 399 1.28e-57 207
Msa0174440 MtrunA17_Chr8g0367581 36.386 415 214 16 393 788 129 512 1.45e-56 214
Msa0174440 MtrunA17_Chr5g0398521 37.151 358 189 9 412 743 54 401 9.67e-55 206
Msa0174440 MtrunA17_Chr3g0134191 33.086 405 226 10 416 783 9 405 6.21e-54 204
Msa0174440 MtrunA17_Chr7g0266631 35.176 398 225 11 407 776 1 393 7.05e-54 204
Msa0174440 MtrunA17_Chr1g0178411 36.648 352 195 8 415 742 13 360 7.93e-54 204
Msa0174440 MtrunA17_Chr1g0182151 37.429 350 191 9 415 742 54 397 1.29e-53 204
Msa0174440 MtrunA17_Chr8g0377731 37.731 379 200 10 416 772 56 420 1.76e-53 204
Msa0174440 MtrunA17_Chr2g0327581 34.896 384 224 12 415 776 49 428 5.61e-53 202
Msa0174440 MtrunA17_Chr5g0427481 34.197 386 212 11 413 770 15 386 6.23e-53 202
Msa0174440 MtrunA17_Chr4g0053211 34.243 403 214 13 415 775 12 405 1.66e-52 200
Msa0174440 MtrunA17_Chr2g0307481 36.800 375 212 10 416 778 69 430 3.50e-52 194
Msa0174440 MtrunA17_Chr1g0153061 34.005 397 217 12 416 775 9 397 3.88e-52 199
Msa0174440 MtrunA17_Chr1g0193221 37.736 371 197 11 416 770 4 356 6.64e-52 199
Msa0174440 MtrunA17_Chr4g0062291 39.088 307 172 6 457 758 174 470 2.67e-51 193
Msa0174440 MtrunA17_Chr1g0152231 36.639 363 200 10 416 762 4 352 3.25e-51 194
Msa0174440 MtrunA17_Chr7g0245931 35.537 363 195 9 408 743 45 395 5.06e-51 194
Msa0174440 MtrunA17_Chr5g0405181 36.729 373 199 13 416 770 21 374 4.33e-49 189
Msa0174440 MtrunA17_Chr8g0372171 36.533 375 201 14 416 772 20 375 8.65e-48 185
Msa0174440 MtrunA17_Chr4g0036001 35.450 378 214 11 408 770 14 376 3.29e-47 182
Msa0174440 MtrunA17_Chr6g0483701 37.425 334 179 12 449 770 67 382 7.15e-47 182
Msa0174440 MtrunA17_Chr4g0070001 33.509 379 227 11 409 779 136 497 1.68e-44 175
Msa0174440 MtrunA17_Chr3g0145071 35.262 363 213 11 415 770 99 446 3.13e-44 174
Msa0174440 MtrunA17_Chr4g0035661 34.037 379 218 11 404 770 78 436 8.78e-44 172
Msa0174440 MtrunA17_Chr7g0258991 33.592 387 223 11 398 770 56 422 9.95e-44 172
Msa0174440 MtrunA17_Chr3g0142261 35.294 323 183 9 458 770 66 372 1.76e-43 172
Msa0174440 MtrunA17_Chr5g0445211 31.899 395 231 11 415 786 74 453 5.46e-42 167
Msa0174440 MtrunA17_Chr3g0101021 33.898 354 206 11 455 786 104 451 2.96e-40 161
Msa0174440 MtrunA17_Chr7g0238581 31.608 367 188 14 407 746 16 346 8.00e-35 142
Msa0174440 MtrunA17_Chr2g0331761 31.081 296 182 6 456 745 232 511 3.55e-34 140
Msa0174440 MtrunA17_Chr4g0067421 32.459 305 170 8 456 742 253 539 1.04e-33 140
Msa0174440 MtrunA17_Chr2g0295881 32.131 305 173 7 456 742 245 533 1.29e-33 140
Msa0174440 MtrunA17_Chr6g0485471 30.405 296 184 6 456 745 162 441 4.87e-33 137
Msa0174440 MtrunA17_Chr1g0187411 31.034 319 178 10 455 745 167 471 6.80e-28 121
Msa0174440 MtrunA17_Chr6g0470541 28.483 323 187 16 416 721 6 301 1.40e-17 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174440 AT2G47500.1 63.188 1035 309 13 2 1030 9 977 0.0 1234
Msa0174440 AT2G47500.2 64.257 996 287 12 2 991 9 941 0.0 1217
Msa0174440 AT5G27000.1 54.985 1033 383 24 4 1020 11 977 0.0 1024
Msa0174440 AT1G09170.5 49.197 1059 449 26 6 1018 10 1025 0.0 906
Msa0174440 AT1G09170.4 57.538 796 298 10 6 774 10 792 0.0 898
Msa0174440 AT1G09170.2 57.538 796 298 10 6 774 10 792 0.0 897
Msa0174440 AT1G09170.3 56.943 785 298 10 6 763 10 781 0.0 877
Msa0174440 AT1G09170.7 56.943 785 298 10 6 763 10 781 0.0 877
Msa0174440 AT1G09170.1 47.120 1059 435 26 6 1018 10 989 0.0 844
Msa0174440 AT1G09170.6 55.191 732 288 10 6 710 10 728 0.0 790
Msa0174440 AT1G09170.8 55.191 732 288 10 6 710 10 728 0.0 790
Msa0174440 AT3G44730.2 51.538 813 332 20 25 799 21 809 0.0 751
Msa0174440 AT3G44730.3 51.538 813 332 20 25 799 21 809 0.0 751
Msa0174440 AT3G44730.1 51.469 783 319 19 55 799 5 764 0.0 720
Msa0174440 AT3G44730.4 51.469 783 319 19 55 799 5 764 0.0 720
Msa0174440 AT3G10310.2 45.833 792 367 17 21 797 3 747 0.0 604
Msa0174440 AT3G10310.1 45.833 792 367 17 21 797 3 747 0.0 604
Msa0174440 AT1G73860.2 58.315 451 180 4 330 778 347 791 5.72e-173 531
Msa0174440 AT1G73860.1 58.315 451 180 4 330 778 430 874 2.19e-171 529
Msa0174440 AT1G18410.3 58.980 451 176 5 330 778 410 853 4.85e-171 528
Msa0174440 AT1G18410.2 58.980 451 176 5 330 778 410 853 4.85e-171 528
Msa0174440 AT1G18410.4 58.980 451 176 5 330 778 553 996 3.10e-169 527
Msa0174440 AT1G18410.1 58.758 451 169 6 330 778 553 988 3.45e-166 519
Msa0174440 AT1G63640.5 52.273 528 219 7 263 779 322 827 4.29e-166 516
Msa0174440 AT1G63640.3 52.471 526 217 7 265 779 334 837 6.38e-166 516
Msa0174440 AT1G63640.1 52.471 526 217 7 265 779 334 837 7.36e-166 516
Msa0174440 AT1G63640.4 52.471 526 217 7 265 779 334 837 7.36e-166 516
Msa0174440 AT1G63640.2 52.471 526 210 7 265 779 334 830 4.01e-165 514
Msa0174440 AT1G18410.5 58.093 451 167 7 330 778 400 830 1.92e-163 507
Msa0174440 AT5G41310.1 53.196 485 198 6 297 778 310 768 3.63e-161 501
Msa0174440 AT2G22610.1 45.750 400 190 7 398 787 405 787 1.73e-99 338
Msa0174440 AT2G22610.2 45.750 400 190 7 398 787 405 787 1.90e-99 338
Msa0174440 AT2G22610.3 45.750 400 190 7 398 787 406 788 2.16e-99 338
Msa0174440 AT5G27550.2 45.910 379 183 4 396 767 118 481 2.21e-98 328
Msa0174440 AT5G27550.1 45.910 379 183 4 396 767 118 481 2.21e-98 328
Msa0174440 AT1G72250.2 44.988 409 194 7 395 789 485 876 3.58e-98 337
Msa0174440 AT1G72250.1 44.988 409 194 7 395 789 476 867 3.63e-98 337
Msa0174440 AT1G72250.4 44.988 409 194 7 395 789 496 887 4.35e-98 337
Msa0174440 AT1G72250.3 44.988 409 194 7 395 789 497 888 4.41e-98 337
Msa0174440 AT5G54670.3 45.109 368 173 8 398 748 324 679 4.20e-91 306
Msa0174440 AT4G27180.1 46.092 371 163 8 398 747 375 729 6.62e-91 307
Msa0174440 AT4G27180.2 46.092 371 163 8 398 747 375 729 6.62e-91 307
Msa0174440 AT5G54670.1 45.109 368 173 8 398 748 384 739 2.40e-90 306
Msa0174440 AT5G54670.2 45.109 368 173 8 398 748 384 739 2.40e-90 306
Msa0174440 AT4G05190.2 41.895 401 198 8 372 748 373 762 1.55e-84 290
Msa0174440 AT4G05190.1 41.895 401 198 8 372 748 386 775 2.52e-84 290
Msa0174440 AT4G21270.1 43.236 377 171 9 398 748 419 778 1.79e-81 282
Msa0174440 AT1G55550.1 36.092 435 238 7 398 808 79 497 2.91e-75 266
Msa0174440 AT5G65930.1 41.449 345 191 4 398 742 875 1208 6.22e-74 267
Msa0174440 AT5G65930.2 41.449 345 191 4 398 742 876 1209 6.92e-74 267
Msa0174440 AT5G65930.3 41.449 345 191 4 398 742 882 1215 6.99e-74 267
Msa0174440 AT5G27950.1 41.989 362 180 10 394 743 62 405 8.11e-67 237
Msa0174440 AT3G17360.2 36.285 463 247 17 459 898 210 647 4.71e-61 229
Msa0174440 AT3G17360.3 36.147 462 241 17 459 898 210 639 8.60e-61 228
Msa0174440 AT3G17360.1 36.147 462 241 17 459 898 210 639 1.07e-60 228
Msa0174440 AT3G44050.1 38.482 382 203 11 415 775 93 463 3.79e-58 219
Msa0174440 AT3G19050.1 42.724 323 161 10 459 763 235 551 1.14e-57 218
Msa0174440 AT2G36200.1 36.154 390 216 12 415 776 12 396 2.22e-55 209
Msa0174440 AT2G37420.1 40.514 311 157 8 452 742 88 390 2.78e-55 209
Msa0174440 AT2G37420.2 40.514 311 157 8 452 742 88 390 2.78e-55 209
Msa0174440 AT2G36200.2 36.154 390 216 12 415 776 12 396 2.87e-55 209
Msa0174440 AT3G63480.2 39.236 288 164 4 458 738 47 330 3.16e-55 199
Msa0174440 AT3G23670.2 36.908 401 212 10 398 772 76 461 4.43e-55 208
Msa0174440 AT3G23670.1 36.908 401 212 10 398 772 76 461 6.55e-55 209
Msa0174440 AT5G65460.6 33.827 405 223 12 393 776 121 501 1.50e-54 207
Msa0174440 AT5G65460.2 33.827 405 223 12 393 776 121 501 1.76e-54 207
Msa0174440 AT5G65460.1 33.827 405 223 12 393 776 121 501 2.15e-54 207
Msa0174440 AT3G63480.1 39.726 292 161 6 458 738 47 334 2.17e-54 197
Msa0174440 AT5G65460.4 33.827 405 223 12 393 776 121 501 2.81e-54 207
Msa0174440 AT5G65460.3 33.824 408 226 12 393 776 121 508 8.77e-54 205
Msa0174440 AT1G59540.1 36.438 365 209 11 416 770 4 355 2.31e-53 201
Msa0174440 AT5G47820.2 33.085 402 220 11 415 775 11 404 3.90e-53 202
Msa0174440 AT5G47820.1 33.085 402 220 11 415 775 11 404 3.90e-53 202
Msa0174440 AT4G14150.1 35.930 398 216 10 398 772 75 456 4.69e-53 203
Msa0174440 AT2G28620.1 35.476 389 215 12 415 776 50 429 7.02e-53 202
Msa0174440 AT2G28620.3 35.476 389 215 12 415 776 50 429 8.02e-53 201
Msa0174440 AT2G28620.2 35.476 389 215 12 415 776 50 429 8.02e-53 201
Msa0174440 AT5G60930.1 32.360 445 241 12 413 806 4 439 1.22e-52 202
Msa0174440 AT5G60930.2 32.360 445 241 12 413 806 4 439 1.38e-52 202
Msa0174440 AT5G60930.3 32.360 445 241 12 413 806 4 439 2.34e-52 201
Msa0174440 AT4G24170.1 36.043 369 203 10 416 770 7 356 1.42e-51 197
Msa0174440 AT4G24170.2 36.043 369 203 10 416 770 7 356 1.42e-51 197
Msa0174440 AT1G12430.2 38.535 314 164 6 451 743 108 413 1.54e-50 194
Msa0174440 AT1G12430.1 38.535 314 164 6 451 743 108 413 1.57e-50 194
Msa0174440 AT3G50240.2 33.333 393 217 12 416 771 26 410 2.32e-50 193
Msa0174440 AT3G50240.4 33.333 393 217 12 416 771 26 410 2.75e-50 194
Msa0174440 AT3G50240.1 33.333 393 217 12 416 771 26 410 2.87e-50 194
Msa0174440 AT4G38950.3 35.641 390 221 11 416 795 14 383 2.99e-50 192
Msa0174440 AT4G38950.5 35.641 390 221 11 416 795 14 383 2.99e-50 192
Msa0174440 AT4G38950.4 35.641 390 221 11 416 795 14 383 2.99e-50 192
Msa0174440 AT4G38950.1 35.641 390 221 11 416 795 14 383 2.99e-50 192
Msa0174440 AT4G38950.2 35.641 390 221 11 416 795 14 383 2.99e-50 192
Msa0174440 AT3G49650.1 33.333 339 206 5 451 777 58 388 7.14e-50 191
Msa0174440 AT5G10470.1 35.057 348 204 8 393 738 125 452 8.23e-50 193
Msa0174440 AT5G10470.2 35.057 348 204 8 393 738 125 452 8.38e-50 192
Msa0174440 AT1G01950.1 35.635 362 192 9 410 743 55 403 1.18e-49 191
Msa0174440 AT1G01950.3 35.655 359 196 10 410 743 55 403 1.36e-49 191
Msa0174440 AT1G01950.2 35.655 359 196 10 410 743 55 403 1.42e-49 190
Msa0174440 AT1G18550.1 36.795 337 187 8 457 777 202 528 1.47e-49 188
Msa0174440 AT3G45850.2 34.896 384 222 13 416 776 56 434 2.76e-49 191
Msa0174440 AT3G45850.1 34.896 384 222 13 416 776 56 434 2.76e-49 191
Msa0174440 AT1G18370.1 39.815 324 163 12 458 768 77 381 1.16e-48 188
Msa0174440 AT2G21300.2 35.422 367 210 10 416 770 25 376 2.79e-48 186
Msa0174440 AT2G21300.4 35.422 367 210 10 416 770 25 376 2.79e-48 186
Msa0174440 AT2G21300.3 35.422 367 210 10 416 770 25 376 2.79e-48 186
Msa0174440 AT2G21300.1 35.422 367 210 10 416 770 25 376 2.79e-48 186
Msa0174440 AT2G21300.5 35.422 367 210 10 416 770 25 376 2.79e-48 186
Msa0174440 AT3G43210.3 37.368 380 205 14 409 774 22 382 8.14e-48 185
Msa0174440 AT3G43210.5 37.368 380 205 14 409 774 22 382 8.14e-48 185
Msa0174440 AT3G43210.2 37.368 380 205 14 409 774 22 382 8.14e-48 185
Msa0174440 AT3G43210.4 37.368 380 205 14 409 774 22 382 8.14e-48 185
Msa0174440 AT3G43210.1 37.368 380 205 14 409 774 22 382 8.14e-48 185
Msa0174440 AT3G54870.3 35.484 310 172 7 451 742 142 441 1.03e-47 185
Msa0174440 AT3G54870.1 35.484 310 172 7 451 742 142 441 1.07e-47 185
Msa0174440 AT3G54870.2 35.484 310 172 7 451 742 142 441 1.55e-47 185
Msa0174440 AT5G66310.2 36.646 322 180 9 458 770 66 372 4.29e-47 184
Msa0174440 AT5G66310.3 36.646 322 180 9 458 770 66 372 4.29e-47 184
Msa0174440 AT5G66310.1 36.646 322 180 9 458 770 66 372 4.29e-47 184
Msa0174440 AT3G51150.1 36.533 323 181 8 458 771 65 372 8.78e-47 182
Msa0174440 AT3G51150.2 36.533 323 181 8 458 771 65 372 9.31e-47 182
Msa0174440 AT3G51150.4 36.533 323 181 8 458 771 65 372 9.31e-47 182
Msa0174440 AT3G51150.3 36.533 323 181 8 458 771 65 372 9.31e-47 182
Msa0174440 AT3G10180.2 36.729 373 199 12 416 770 4 357 3.30e-46 181
Msa0174440 AT3G10180.1 36.729 373 199 12 416 770 4 357 3.85e-46 181
Msa0174440 AT4G39050.1 37.500 320 181 10 458 770 138 445 4.41e-45 177
Msa0174440 AT2G21380.2 36.562 320 184 10 458 770 144 451 5.97e-45 177
Msa0174440 AT2G21380.1 36.562 320 184 10 458 770 144 451 5.97e-45 177
Msa0174440 AT1G21730.1 35.185 378 216 12 411 776 71 431 1.54e-44 175
Msa0174440 AT5G06670.8 35.976 328 184 9 458 770 106 422 3.49e-44 172
Msa0174440 AT5G06670.4 35.976 328 184 9 458 770 106 422 3.49e-44 172
Msa0174440 AT5G06670.7 35.976 328 184 9 458 770 106 422 3.49e-44 172
Msa0174440 AT5G06670.5 35.976 328 184 9 458 770 106 422 4.03e-44 172
Msa0174440 AT5G06670.2 35.976 328 184 9 458 770 106 422 2.20e-43 171
Msa0174440 AT5G06670.3 35.976 328 184 9 458 770 106 422 2.20e-43 171
Msa0174440 AT5G06670.6 35.312 337 183 10 458 770 106 431 6.50e-42 167
Msa0174440 AT5G06670.1 35.312 337 183 10 458 770 106 431 6.50e-42 167
Msa0174440 AT1G01950.4 38.889 270 137 6 494 743 1 262 3.39e-41 163
Msa0174440 AT3G50240.3 36.246 309 159 10 498 771 3 308 6.81e-41 164
Msa0174440 AT3G12020.4 35.671 328 185 10 458 770 109 425 1.30e-40 162
Msa0174440 AT3G12020.1 35.671 328 185 10 458 770 109 425 1.30e-40 162
Msa0174440 AT3G12020.3 36.000 325 182 10 458 767 109 422 1.70e-40 162
Msa0174440 AT3G12020.2 36.000 325 182 10 458 767 109 422 1.70e-40 162
Msa0174440 AT1G59540.2 37.363 273 152 9 507 770 1 263 6.29e-38 153
Msa0174440 AT3G20150.1 34.091 352 195 13 457 781 134 475 2.42e-37 152
Msa0174440 AT3G20150.2 34.091 352 195 13 457 781 134 475 2.47e-37 152
Msa0174440 AT5G27950.2 39.669 242 128 6 514 743 4 239 2.16e-36 144
Msa0174440 AT3G16060.1 29.570 372 221 9 392 747 151 497 1.06e-34 142
Msa0174440 AT3G16630.2 29.972 357 212 10 408 742 186 526 6.97e-34 140
Msa0174440 AT3G16630.1 29.972 357 212 10 408 742 186 526 6.97e-34 140
Msa0174440 AT5G02370.1 31.579 342 191 9 415 738 20 336 2.88e-33 137
Msa0174440 AT5G42490.2 34.828 290 154 10 408 685 6 272 5.12e-32 135
Msa0174440 AT5G42490.1 34.828 290 154 10 408 685 6 272 5.42e-32 135
Msa0174440 AT4G14330.1 32.362 309 182 9 455 752 85 377 6.89e-32 134
Msa0174440 AT3G51150.5 38.916 203 116 4 577 771 17 219 3.52e-27 119
Msa0174440 AT5G65460.5 33.984 256 137 7 540 776 13 255 1.88e-26 117
Msa0174440 AT5G23910.2 26.471 306 200 9 444 748 44 325 1.91e-19 94.7
Msa0174440 AT5G23910.1 26.471 306 200 9 444 748 40 321 1.96e-19 94.4

Find 249 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTCACTATAGGATTTA+AGG 0.095452 1_4:-60097687 None:intergenic
TGAAAATGTTAGAAACTTTC+TGG 0.118054 1_4:+60097401 Msa0174440:CDS
AGCAAAGTATTTACCTAAAT+TGG 0.136829 1_4:-60099161 None:intergenic
TTGTTTAATCAGGAAGTATT+AGG 0.173618 1_4:+60099466 Msa0174440:intron
TTATTAACATTAGAGCTTTC+AGG 0.214377 1_4:+60102648 Msa0174440:three_prime_UTR
GGCTTAGCTCATGCTGCTTC+TGG 0.218020 1_4:+60099296 Msa0174440:CDS
TTCAACTTCAACAAAGTCTT+TGG 0.227045 1_4:+60099612 Msa0174440:CDS
CAGTCTAGTTCTCATTCTTT+AGG 0.245394 1_4:+60097982 Msa0174440:intron
ATCGGCTGCTACGGTCATTA+AGG 0.248332 1_4:-60100449 None:intergenic
CACGAGGAGTTCTCCAATTT+AGG 0.260528 1_4:+60099148 Msa0174440:CDS
AACAAATCTCTTTCAGCTTT+GGG 0.274588 1_4:+60100723 Msa0174440:CDS
TGTTGTATTTACACAGATAA+TGG 0.279167 1_4:+60102584 Msa0174440:three_prime_UTR
CGAGTAAGACCTTTCTTATC+TGG 0.281087 1_4:+60099498 Msa0174440:CDS
ACTGGAGCTGGTTGCCTTGT+TGG 0.285741 1_4:-60102362 None:intergenic
GCTAATGGTGTATGGAAATT+TGG 0.292995 1_4:+60097721 Msa0174440:CDS
AATTTAGAACATTCTATATC+TGG 0.297913 1_4:+60101242 Msa0174440:CDS
TAACAAATCTCTTTCAGCTT+TGG 0.302511 1_4:+60100722 Msa0174440:CDS
CAATGAAGTCCAGGATCTTA+AGG 0.313316 1_4:+60099355 Msa0174440:CDS
CTTAAGGGTAATAAGATTAC+TGG 0.318043 1_4:+60099371 Msa0174440:CDS
CTTGACAAAGAATTGGTAAA+TGG 0.318695 1_4:-60097799 None:intergenic
GGCAACCAGTTTAACATTGC+TGG 0.319385 1_4:+60101847 Msa0174440:CDS
TGATGTCGAGTCTAATAAAA+TGG 0.321854 1_4:+60097864 Msa0174440:CDS
CGCCCTTTCCCATTCTTTGA+GGG 0.330150 1_4:-60099582 None:intergenic
AAAGCCAAGGTGTAAATTAC+AGG 0.341060 1_4:+60100029 Msa0174440:CDS
AGGTAGGAATTCCAATTTCC+TGG 0.342578 1_4:-60097431 None:intergenic
CCAGTTTAACATTGCTGGTT+CGG 0.343097 1_4:+60101852 Msa0174440:CDS
CCATTTGTTTGTTTCCTTGA+AGG 0.345907 1_4:-60102323 None:intergenic
GCCTCTCATGAACATATTAT+AGG 0.347422 1_4:-60101827 None:intergenic
CATCAGAACATGACTTGCTT+TGG 0.348531 1_4:+60101911 Msa0174440:CDS
GGGTGTTGGGAAGCAGATAA+TGG 0.350245 1_4:+60101739 Msa0174440:CDS
TATAGTGAATGGAAACAAAC+TGG 0.351051 1_4:+60097697 Msa0174440:CDS
CTTACCGTAGGAACTTCTTC+TGG 0.354763 1_4:-60098039 None:intergenic
CCATTCACTATAGGATTTAA+GGG 0.356112 1_4:-60097686 None:intergenic
TTGAGTTCTTTGTCTCGATA+TGG 0.357001 1_4:-60101554 None:intergenic
AAAGACTTTGTTGAAGTTGA+AGG 0.358638 1_4:-60099610 None:intergenic
GACATCTGGAGCTGTCTTAC+GGG 0.363400 1_4:+60100611 Msa0174440:CDS
CAACTCCTTCCCACATGCTT+CGG 0.364129 1_4:-60096471 None:intergenic
CTGCCCCATCCTTGTTGACT+CGG 0.365037 1_4:-60101063 None:intergenic
AAACTTTCTGGTGGCTATCC+AGG 0.365478 1_4:+60097413 Msa0174440:CDS
AAAACTTACCAAGTGAATCT+TGG 0.366053 1_4:-60100818 None:intergenic
TGTTTAATCAGGAAGTATTA+GGG 0.366153 1_4:+60099467 Msa0174440:intron
CTGATATGCAGCCACTTGTT+AGG 0.366564 1_4:+60099747 Msa0174440:CDS
CTGGTGGCTATCCAGGAAAT+TGG 0.366578 1_4:+60097420 Msa0174440:CDS
GTTGACATGAAACGTAAAAC+TGG 0.370072 1_4:+60102383 Msa0174440:CDS
AGGAACAAACAAATAATAAA+AGG 0.370114 1_4:-60102464 None:intergenic
AGTTTGTTTCCATTCACTAT+AGG 0.370258 1_4:-60097695 None:intergenic
TCGTCTTAAAGATCTTGATT+TGG 0.370539 1_4:+60096935 Msa0174440:CDS
TTCTCCAACAGCATTGGCCT+CGG 0.372109 1_4:-60100984 None:intergenic
ACTATCTCTCTTTGTTGCTT+CGG 0.379839 1_4:-60096501 None:intergenic
GATTGATGTTGGCAACTTAG+AGG 0.384355 1_4:+60101370 Msa0174440:CDS
TTCTTGCCAATGCTGCCTTA+AGG 0.390471 1_4:-60101211 None:intergenic
CTACTGCTCCTTCACCTTCA+AGG 0.390953 1_4:+60102309 Msa0174440:CDS
TGTTCTTAACAAGGTTCATC+CGG 0.391884 1_4:+60097212 Msa0174440:CDS
CCGAACCAGCAATGTTAAAC+TGG 0.392287 1_4:-60101852 None:intergenic
GCGCCCTTTCCCATTCTTTG+AGG 0.394470 1_4:-60099583 None:intergenic
TGAGCAAGTCAGAGATCTAT+TGG 0.396757 1_4:+60100138 Msa0174440:CDS
CATTCTATATCTGGAAGCTC+TGG 0.416237 1_4:+60101251 Msa0174440:CDS
TCCACGGTACTCGAATGATT+TGG 0.419332 1_4:-60099525 None:intergenic
TGCTTGACTGTACATGTTCA+AGG 0.421405 1_4:+60100579 Msa0174440:CDS
AAATACTGAAAAGCAGATAA+TGG 0.421522 1_4:-60097378 None:intergenic
AGCCTTCTGAGGAAGAGTTT+AGG 0.424022 1_4:+60097157 Msa0174440:CDS
GCTTACGGCCAAACAGGATC+AGG 0.424727 1_4:+60099803 Msa0174440:CDS
CATGAACTGCATACCAGCTT+TGG 0.425873 1_4:-60099113 None:intergenic
ATTAATGTTCCCTCAAAGAA+TGG 0.427785 1_4:+60099573 Msa0174440:CDS
GCAGATAATGGCGCTCCATC+GGG 0.427834 1_4:-60097366 None:intergenic
ACAGTTGGTTGAATCTGTTT+TGG 0.428273 1_4:+60098490 Msa0174440:intron
AGAGGTCCTTGACAAAGAAT+TGG 0.435919 1_4:-60097806 None:intergenic
GTTTCAGATTGCCAGCCTTA+AGG 0.436181 1_4:+60101196 Msa0174440:intron
TGGTAACATGTTAGGGTGTT+GGG 0.437816 1_4:+60101726 Msa0174440:CDS
GTGAGTTTGCTATTTCTGTA+AGG 0.441257 1_4:-60100786 None:intergenic
AATGAAGTCCAGGATCTTAA+GGG 0.442261 1_4:+60099356 Msa0174440:CDS
CAAGGAAGAGACTTGACATC+TGG 0.442958 1_4:+60100597 Msa0174440:CDS
GAAGCAACAAAGAGAGATAG+TGG 0.446472 1_4:+60096503 Msa0174440:five_prime_UTR
CCCTTAAATCCTATAGTGAA+TGG 0.447079 1_4:+60097686 Msa0174440:CDS
TGACATCTGGAGCTGTCTTA+CGG 0.447398 1_4:+60100610 Msa0174440:CDS
ATATTTGCTTACGGCCAAAC+AGG 0.449662 1_4:+60099797 Msa0174440:CDS
TCTCCAACAGCATTGGCCTC+GGG 0.454242 1_4:-60100983 None:intergenic
ACCCTTTGATTCATGTCCGT+TGG 0.457390 1_4:-60101965 None:intergenic
AACAAGACTGGTAACATGTT+AGG 0.459081 1_4:+60101718 Msa0174440:CDS
CGTCAAAGAGCTCAAAGAAC+AGG 0.459647 1_4:+60101087 Msa0174440:CDS
CATTACAAGCCAAGATGAAC+TGG 0.460521 1_4:+60098541 Msa0174440:CDS
AGCAGATAATGGCGCTCCAT+CGG 0.461774 1_4:-60097367 None:intergenic
TCTTATTACCCTTAAGATCC+TGG 0.463135 1_4:-60099364 None:intergenic
GCCCGCTGGCTTGCATGATA+AGG 0.463420 1_4:-60101305 None:intergenic
AATTGGAATTCCTACCTTTG+AGG 0.464052 1_4:+60097437 Msa0174440:CDS
TGGAAACAAACTGGGGCTAA+TGG 0.464682 1_4:+60097706 Msa0174440:CDS
TCGGCTGCTACGGTCATTAA+GGG 0.465945 1_4:-60100448 None:intergenic
TCATGCCATGTACAAGCAAC+GGG 0.466768 1_4:-60102617 None:intergenic
AAATTTATGTCTTATATCCC+TGG 0.467256 1_4:+60102722 Msa0174440:three_prime_UTR
TACAGGAGAGTGGGTTGATA+AGG 0.467459 1_4:+60101672 Msa0174440:CDS
CTGGTAACATGTTAGGGTGT+TGG 0.468558 1_4:+60101725 Msa0174440:CDS
CGTTTCATGTCAACTGGAGC+TGG 0.468835 1_4:-60102374 None:intergenic
TTAGGCTTGGTTTGAGAAGT+GGG 0.471557 1_4:+60097175 Msa0174440:CDS
GGATCGTTCTGAGTATACTT+TGG 0.472506 1_4:-60101806 None:intergenic
GGTGTTGGGAAGCAGATAAT+GGG 0.474927 1_4:+60101740 Msa0174440:CDS
CCAGCGGGCTGCAGATATCA+TGG 0.475683 1_4:+60101319 Msa0174440:CDS
TCTTCCTCAGAAGGCTCTGC+TGG 0.476392 1_4:-60097150 None:intergenic
TGCCAATGCTGCCTTAAGGC+TGG 0.477104 1_4:-60101207 None:intergenic
TGCCAGCCTTAAGGCAGCAT+TGG 0.477178 1_4:+60101205 Msa0174440:CDS
GTTTGGAACATAGTGGGGTT+CGG 0.478080 1_4:+60096446 Msa0174440:five_prime_UTR
TTTATAGGCATGCACATTCA+CGG 0.478168 1_4:+60099275 Msa0174440:intron
GAACTGCATACCAGCTTTGG+TGG 0.479749 1_4:-60099110 None:intergenic
TCTGAGGAAGAGTTTAGGCT+TGG 0.480056 1_4:+60097162 Msa0174440:CDS
AGAGTGGGTTGATAAGGTTA+TGG 0.481612 1_4:+60101678 Msa0174440:CDS
GTGAACAAACATTAGTGTCT+TGG 0.482148 1_4:-60100954 None:intergenic
GATATCATGGATGATCCCTT+TGG 0.484586 1_4:+60101332 Msa0174440:CDS
TAAGGCAGCATTGGCAAGAA+AGG 0.485960 1_4:+60101214 Msa0174440:CDS
CACTGGTTGCCGGCATCCAA+AGG 0.486861 1_4:-60101348 None:intergenic
AGTATCATACCAGTTCATCT+TGG 0.487526 1_4:-60098550 None:intergenic
AGGAAACCGGTACAGGAGAG+TGG 0.489309 1_4:+60101662 Msa0174440:CDS
ACCTGTGAGATCGGCTGCTA+CGG 0.491250 1_4:-60100458 None:intergenic
AAACTGGGGCTAATGGTGTA+TGG 0.492107 1_4:+60097713 Msa0174440:CDS
CAACATCAATCACTGGTTGC+CGG 0.493007 1_4:-60101358 None:intergenic
GGGATTAGTGCAGAATCAAC+AGG 0.493427 1_4:-60097345 None:intergenic
TGTTATTGAACTAATGAACT+TGG 0.493700 1_4:+60100395 Msa0174440:CDS
TTAAGAAGATATGAAGCAGC+AGG 0.495720 1_4:+60097084 Msa0174440:CDS
AATGTTTGCATATTTGCTTA+CGG 0.497791 1_4:+60099788 Msa0174440:CDS
GTATGAAAGAGGATGATGTT+TGG 0.499520 1_4:+60096429 None:intergenic
AAGAGAGATAGTGGGAGGAG+AGG 0.499752 1_4:+60096512 Msa0174440:five_prime_UTR
CTTGTTAGGTCTGTGCTCGA+TGG 0.501110 1_4:+60099761 Msa0174440:CDS
TGCCCCATCCTTGTTGACTC+GGG 0.501518 1_4:-60101062 None:intergenic
ACTTGAACAAGGCTTGCATC+TGG 0.501874 1_4:-60100357 None:intergenic
TGGATGATCCCTTTGGATGC+CGG 0.503861 1_4:+60101339 Msa0174440:CDS
TATTTCTGTAAGGGACATGT+TGG 0.504849 1_4:-60100776 None:intergenic
GCTGCCCGAGTCAACAAGGA+TGG 0.505773 1_4:+60101058 Msa0174440:CDS
AATTGTTTCTCCAACAGCAT+TGG 0.507069 1_4:-60100990 None:intergenic
AAGGATTGTGAGTAGTGTAT+TGG 0.507645 1_4:+60097663 Msa0174440:CDS
TTTAGGCTTGGTTTGAGAAG+TGG 0.507792 1_4:+60097174 Msa0174440:CDS
ATGCATCTCGTTGACTTGGC+AGG 0.508762 1_4:+60100639 Msa0174440:CDS
AAATTGTGTGGAAGACGATA+AGG 0.509546 1_4:+60101642 Msa0174440:CDS
TTAATGTTCCCTCAAAGAAT+GGG 0.510130 1_4:+60099574 Msa0174440:CDS
GATGATGTTTGGAACATAGT+GGG 0.512689 1_4:+60096440 Msa0174440:five_prime_UTR
CCTTCAAGGAAACAAACAAA+TGG 0.513212 1_4:+60102323 Msa0174440:CDS
TTCAGTGGCATCTGTTGTTG+AGG 0.514852 1_4:+60096890 Msa0174440:CDS
TAATGCCCGTTGCTTGTACA+TGG 0.516093 1_4:+60102612 Msa0174440:three_prime_UTR
CCATGATATCTGCAGCCCGC+TGG 0.516277 1_4:-60101319 None:intergenic
TTATACAGCGAATCAAAGAA+AGG 0.518620 1_4:+60100069 Msa0174440:CDS
TCCTATGGTAACAAAGAAAG+AGG 0.521036 1_4:+60098881 Msa0174440:CDS
ATCAACCCACTCTCCTGTAC+CGG 0.523615 1_4:-60101668 None:intergenic
GGATGATGTTTGGAACATAG+TGG 0.524459 1_4:+60096439 Msa0174440:five_prime_UTR
TGGGATAACTTCAGGAGGAC+AGG 0.526345 1_4:+60100931 Msa0174440:intron
CTGCCCGAGTCAACAAGGAT+GGG 0.526826 1_4:+60101059 Msa0174440:CDS
CGAAGCATGTGGGAAGGAGT+TGG 0.528965 1_4:+60096472 Msa0174440:five_prime_UTR
GTTTGTTTCCTTGAAGGTGA+AGG 0.529317 1_4:-60102317 None:intergenic
ACAAGACTGGTAACATGTTA+GGG 0.529408 1_4:+60101719 Msa0174440:CDS
AGGATATACACCTGTGAGAT+CGG 0.531914 1_4:-60100467 None:intergenic
GTCATGTTCTGATGAATCAC+TGG 0.532004 1_4:-60101902 None:intergenic
TCCTCTTTCTTTGTTACCAT+AGG 0.533041 1_4:-60098882 None:intergenic
ATGCATGCATCTCGTTGACT+TGG 0.535190 1_4:+60100635 Msa0174440:CDS
ACAGTTCAAACCACCAAAGC+TGG 0.535967 1_4:+60099100 Msa0174440:CDS
CTGGAAGCTCTGGAAAATGT+AGG 0.537051 1_4:+60101261 Msa0174440:CDS
ACCTTATCATGCAAGCCAGC+GGG 0.537523 1_4:+60101304 Msa0174440:CDS
TTCTAGATCAGATGCCTCAA+AGG 0.539627 1_4:-60097451 None:intergenic
GTGGAAGACGATAAGGAAAC+CGG 0.539726 1_4:+60101649 Msa0174440:CDS
TTTAGGGAGGAAAATCATCA+AGG 0.539794 1_4:+60097644 Msa0174440:intron
CAATTACTCCAAGATTCACT+TGG 0.541197 1_4:+60100810 Msa0174440:CDS
GGGCTGTTGCTCCGACTGCA+CGG 0.542943 1_4:-60100428 None:intergenic
CAGCTAAAAGCACAGAATTG+AGG 0.543524 1_4:+60102007 Msa0174440:CDS
AGAGATCTATTGGTTACTGA+TGG 0.546337 1_4:+60100148 Msa0174440:CDS
AGTGAAATGTCTCAAAGAGA+TGG 0.547324 1_4:+60098718 Msa0174440:CDS
CAAAGAATTGGTAAATGGCT+CGG 0.551364 1_4:-60097794 None:intergenic
TTCCCTCAAAGAATGGGAAA+GGG 0.552087 1_4:+60099580 Msa0174440:CDS
AGTCCCGAGGCCAATGCTGT+TGG 0.554966 1_4:+60100980 Msa0174440:CDS
GTCATGCCATGTACAAGCAA+CGG 0.555428 1_4:-60102618 None:intergenic
GGTGGATAACAAGATTCCTA+TGG 0.557286 1_4:+60098866 Msa0174440:intron
ACTGGTTGCCGGCATCCAAA+GGG 0.557291 1_4:-60101347 None:intergenic
AAGTTAGATGTGAACAAGAC+TGG 0.557708 1_4:+60101706 Msa0174440:CDS
TCTAGAAAATCAGAAGAAGC+TGG 0.560090 1_4:+60096960 Msa0174440:CDS
AGAGTTGCTACAGTTGAACT+TGG 0.560508 1_4:+60101034 Msa0174440:CDS
GGTCGACAAATCTGAGGCGA+CGG 0.560580 1_4:+60100671 Msa0174440:CDS
TGAGTTTGCTATTTCTGTAA+GGG 0.560724 1_4:-60100785 None:intergenic
GTTCTTAACAAGGTTCATCC+GGG 0.561305 1_4:+60097213 Msa0174440:CDS
GACGATAAGGAAACCGGTAC+AGG 0.562544 1_4:+60101655 Msa0174440:CDS
GTTCCCTCAAAGAATGGGAA+AGG 0.565328 1_4:+60099579 Msa0174440:CDS
GTCGACAAATCTGAGGCGAC+GGG 0.565704 1_4:+60100672 Msa0174440:CDS
CATTTACCAATTCTTTGTCA+AGG 0.566014 1_4:+60097800 Msa0174440:CDS
AAGTTGCCAACATCAATCAC+TGG 0.567692 1_4:-60101365 None:intergenic
TTTGGTTGTCCAGATAAGAA+AGG 0.569317 1_4:-60099507 None:intergenic
AGCCAACGGACATGAATCAA+AGG 0.569973 1_4:+60101963 Msa0174440:CDS
GCAGCATTGGCAAGAAAGGA+AGG 0.570071 1_4:+60101218 Msa0174440:CDS
TTTGGACCATCTGCAGCCCA+AGG 0.571127 1_4:+60099630 Msa0174440:CDS
ACCGTAGCAGCCGATCTCAC+AGG 0.572158 1_4:+60100457 Msa0174440:CDS
AACCAACCTTGGGCTGCAGA+TGG 0.574279 1_4:-60099636 None:intergenic
TCTTTGTAATGTTCTTAACA+AGG 0.574812 1_4:+60097203 Msa0174440:CDS
GAGCCCTGTAATTTACACCT+TGG 0.575443 1_4:-60100033 None:intergenic
AGCAAATGCTCTTTGATCAA+CGG 0.575718 1_4:+60098961 Msa0174440:CDS
GGGTTCGGAACCGAAGCATG+TGG 0.581338 1_4:+60096461 Msa0174440:five_prime_UTR
TGCCCGAGTCAACAAGGATG+GGG 0.582451 1_4:+60101060 Msa0174440:CDS
CAAACTATACAATGAAGTCC+AGG 0.588403 1_4:+60099346 Msa0174440:CDS
AATGGTGTATGGAAATTTGG+TGG 0.588838 1_4:+60097724 Msa0174440:CDS
GACGGGCGATAGATTGAAAG+AGG 0.592922 1_4:+60100689 Msa0174440:CDS
CACCTTATCATGCAAGCCAG+CGG 0.593447 1_4:+60101303 Msa0174440:CDS
TTGACTTGGCAGGAAGTGAG+AGG 0.593669 1_4:+60100649 Msa0174440:CDS
GCCAACGGACATGAATCAAA+GGG 0.594270 1_4:+60101964 Msa0174440:CDS
AGCCTAAACTCTTCCTCAGA+AGG 0.596157 1_4:-60097159 None:intergenic
GTGACTCCTCGTCAGCAACA+TGG 0.598453 1_4:-60098920 None:intergenic
TTTGAACAAGACTATTCACT+GGG 0.599721 1_4:-60101621 None:intergenic
AGATCAGATGCCTCAAAGGT+AGG 0.602073 1_4:-60097447 None:intergenic
GTAGGACAGCGGCTAGTGAA+CGG 0.606275 1_4:+60101279 Msa0174440:CDS
TTCGTAGTAACTCTCAAAGA+GGG 0.606354 1_4:+60100325 Msa0174440:CDS
ATAGTGAATGGAAACAAACT+GGG 0.606384 1_4:+60097698 Msa0174440:CDS
GTCACCTTGGATACAGAACC+CGG 0.607742 1_4:-60097231 None:intergenic
CGGCAACCAGTGATTGATGT+TGG 0.608755 1_4:+60101359 Msa0174440:CDS
GAAGCCAGAAGAAGTTCCTA+CGG 0.609122 1_4:+60098035 Msa0174440:CDS
TCCTATAATATGTTCATGAG+AGG 0.612800 1_4:+60101826 Msa0174440:CDS
AAATGTTAGAAACTTTCTGG+TGG 0.614047 1_4:+60097404 Msa0174440:CDS
TTTATTAGACTCGACATCAG+AGG 0.616146 1_4:-60097860 None:intergenic
AAGCCAAGGTGTAAATTACA+GGG 0.618780 1_4:+60100030 Msa0174440:CDS
TGGTGCTGCCCGAGTCAACA+AGG 0.620113 1_4:+60101054 Msa0174440:CDS
TTTACCAGCAGAGCCTTCTG+AGG 0.621122 1_4:+60097146 Msa0174440:CDS
ACCGTGGAGAACATAGAAGA+TGG 0.621354 1_4:+60099540 Msa0174440:CDS
GGAAACCGGTACAGGAGAGT+GGG 0.621777 1_4:+60101663 Msa0174440:CDS
TCATCCGGGTTCTGTATCCA+AGG 0.624192 1_4:+60097227 Msa0174440:CDS
GGTCATAAGAACCGTGCAGT+CGG 0.625242 1_4:+60100417 Msa0174440:CDS
GGTAGCAGCATCAACATCAT+CGG 0.626833 1_4:-60101881 None:intergenic
GTTATTGAACTAATGAACTT+GGG 0.629233 1_4:+60100396 Msa0174440:CDS
ATTCGTAGTAACTCTCAAAG+AGG 0.631495 1_4:+60100324 Msa0174440:CDS
GATTCTGCACTAATCCCCGA+TGG 0.632933 1_4:+60097351 Msa0174440:CDS
TAGTCTTGTTCAAAATTGTG+TGG 0.633315 1_4:+60101630 Msa0174440:CDS
ACCATCTTCTATGTTCTCCA+CGG 0.634195 1_4:-60099541 None:intergenic
GTTTGTTCACATTAGTCCCG+AGG 0.634780 1_4:+60100967 Msa0174440:CDS
CGGAACCGAAGCATGTGGGA+AGG 0.635189 1_4:+60096466 Msa0174440:five_prime_UTR
CATGCAAATGAAATTTCACG+AGG 0.647135 1_4:+60099132 Msa0174440:CDS
TGAGAGGGTCGACAAATCTG+AGG 0.647349 1_4:+60100665 Msa0174440:CDS
TTGTTGATGATACTTGAACA+AGG 0.647374 1_4:-60100368 None:intergenic
TCGAGCACAGACCTAACAAG+TGG 0.649204 1_4:-60099758 None:intergenic
AAGCAACAAAGAGAGATAGT+GGG 0.649294 1_4:+60096504 Msa0174440:five_prime_UTR
GTGTACAGAGCAAAAGCCAA+AGG 0.650308 1_4:+60096587 Msa0174440:five_prime_UTR
ACATCTGGAGCTGTCTTACG+GGG 0.650405 1_4:+60100612 Msa0174440:CDS
TTGACATGAAACGTAAAACT+GGG 0.651208 1_4:+60102384 Msa0174440:CDS
TGAACAAGACTATTCACTGG+GGG 0.651920 1_4:-60101619 None:intergenic
GAGGATGTTCTTCAACAGCA+TGG 0.652965 1_4:+60096909 Msa0174440:CDS
CAACAAAGAGAGATAGTGGG+AGG 0.654842 1_4:+60096507 Msa0174440:five_prime_UTR
ATGATGTTTGGAACATAGTG+GGG 0.657605 1_4:+60096441 Msa0174440:five_prime_UTR
ACGGACATGAATCAAAGGGT+AGG 0.658106 1_4:+60101968 Msa0174440:CDS
TGACTTGGCAGGAAGTGAGA+GGG 0.658596 1_4:+60100650 Msa0174440:CDS
AGATAATGGGAACTTATCTG+AGG 0.660079 1_4:+60101753 Msa0174440:CDS
CAGATAATGGCGCTCCATCG+GGG 0.660924 1_4:-60097365 None:intergenic
AAAGTTACAAGCGTAGCCAA+CGG 0.665101 1_4:+60101949 Msa0174440:CDS
CTCTGGAAAATGTAGGACAG+CGG 0.675648 1_4:+60101268 Msa0174440:CDS
GGTTCGGAACCGAAGCATGT+GGG 0.676772 1_4:+60096462 Msa0174440:five_prime_UTR
ACCAAATCATTCGAGTACCG+TGG 0.683949 1_4:+60099524 Msa0174440:CDS
TAAGAAGATATGAAGCAGCA+GGG 0.688225 1_4:+60097085 Msa0174440:CDS
TCGCACATCGAACACCAACA+AGG 0.688670 1_4:+60102348 Msa0174440:CDS
CATTAACAAATTCACCACCC+TGG 0.700253 1_4:+60101596 Msa0174440:CDS
TAGTGAATGGAAACAAACTG+GGG 0.713604 1_4:+60097699 Msa0174440:CDS
GAAGATATGAAGCAGCAGGG+TGG 0.738522 1_4:+60097088 Msa0174440:CDS
TTGCTGACGAGGAGTCACAG+AGG 0.755516 1_4:+60098925 Msa0174440:CDS
TTGAACAAGACTATTCACTG+GGG 0.770387 1_4:-60101620 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAAAATGATATCTTA+TGG + chr1_4:60101439-60101458 Msa0174440:intron 10.0%
!!! ATTTACTATGAATGATTTTT+TGG + chr1_4:60097269-60097288 Msa0174440:intron 15.0%
!!! ATAATTGATTCATGTTTTTT+AGG + chr1_4:60097627-60097646 Msa0174440:intron 15.0%
!!! TAATTGATTCATGTTTTTTA+GGG + chr1_4:60097628-60097647 Msa0174440:intron 15.0%
!! TTTATGCCAATATAATATTA+AGG + chr1_4:60099437-60099456 Msa0174440:intron 15.0%
!! AGTTAACCTTAATATTATAT+TGG - chr1_4:60099446-60099465 None:intergenic 15.0%
!!! ATTTTAATGTAACAACTAAA+AGG - chr1_4:60100190-60100209 None:intergenic 15.0%
!! TGACTTCTTTAATATTTATT+TGG + chr1_4:60100552-60100571 Msa0174440:intron 15.0%
!!! GATATCATTTTTTAAAATCA+GGG - chr1_4:60101436-60101455 None:intergenic 15.0%
!!! AGATATCATTTTTTAAAATC+AGG - chr1_4:60101437-60101456 None:intergenic 15.0%
!!! TATCTTATGGAAATTTTATT+TGG + chr1_4:60101452-60101471 Msa0174440:intron 15.0%
!! TATTTCTTATTGATATCTTA+TGG + chr1_4:60101496-60101515 Msa0174440:intron 15.0%
!!! ATTTTCATGTGAAATGTAAA+AGG + chr1_4:60097022-60097041 Msa0174440:intron 20.0%
!!! GTAAATTCTGTATTTTCTTT+AGG + chr1_4:60097311-60097330 Msa0174440:intron 20.0%
!! TTTGAGTATAAAATGTATCA+TGG + chr1_4:60097516-60097535 Msa0174440:intron 20.0%
!! ATTATCTGATGTTGTATTAT+TGG - chr1_4:60097554-60097573 None:intergenic 20.0%
!! ATAATACAACATCAGATAAT+TGG + chr1_4:60097554-60097573 Msa0174440:intron 20.0%
!! TAATACAACATCAGATAATT+GGG + chr1_4:60097555-60097574 Msa0174440:intron 20.0%
!! GGTTTAAGAGTTTAATTAAA+CGG - chr1_4:60098155-60098174 None:intergenic 20.0%
!! ATTATTGTGCATCTAAAAAT+TGG + chr1_4:60098232-60098251 Msa0174440:intron 20.0%
!! AAATAACACTTAATAGCTAA+TGG - chr1_4:60098594-60098613 None:intergenic 20.0%
!! CTAAGAATTGAGTAAAATAA+TGG - chr1_4:60098621-60098640 None:intergenic 20.0%
!!! CATTATTTTACTCAATTCTT+AGG + chr1_4:60098619-60098638 Msa0174440:intron 20.0%
!!! TTTCTATTCGTGATTTTTTA+AGG + chr1_4:60099412-60099431 Msa0174440:intron 20.0%
!! AATTGTCATCAAAATATTCA+AGG - chr1_4:60099957-60099976 None:intergenic 20.0%
!!! TGATATTTGTTTCTAAATAC+TGG + chr1_4:60100237-60100256 Msa0174440:intron 20.0%
!!! AATTTAGAACATTCTATATC+TGG + chr1_4:60101242-60101261 Msa0174440:CDS 20.0%
!!! ATCTTATGGATATTTTAAAC+TGG + chr1_4:60101510-60101529 Msa0174440:intron 20.0%
!!! TTCTTGTTAAGCATTTTAAA+AGG + chr1_4:60102428-60102447 Msa0174440:three_prime_UTR 20.0%
!!! TCTTGTTAAGCATTTTAAAA+GGG + chr1_4:60102429-60102448 Msa0174440:three_prime_UTR 20.0%
!! AGGAACAAACAAATAATAAA+AGG - chr1_4:60102467-60102486 None:intergenic 20.0%
!!! AACCATATATATTTTTTTGC+TGG + chr1_4:60102534-60102553 Msa0174440:three_prime_UTR 20.0%
!!! ACCATATATATTTTTTTGCT+GGG + chr1_4:60102535-60102554 Msa0174440:three_prime_UTR 20.0%
! AAGCAGATACAAAAAGAAAA+AGG + chr1_4:60096546-60096565 Msa0174440:five_prime_UTR 25.0%
! ATACAAAAAGAAAAAGGAAG+AGG + chr1_4:60096552-60096571 Msa0174440:five_prime_UTR 25.0%
! ATGTTATGTTATGTTACCTT+TGG - chr1_4:60096606-60096625 None:intergenic 25.0%
!! CTTTCTCTTTATTTCTTCTT+TGG + chr1_4:60096752-60096771 Msa0174440:intron 25.0%
! TAAACTTTGTCTTTAGTTGA+AGG + chr1_4:60096795-60096814 Msa0174440:intron 25.0%
! AGGATTAAGAAGAATTTAAG+AGG + chr1_4:60096815-60096834 Msa0174440:intron 25.0%
!!! GTTACATTGTTGTTTTGTTT+TGG + chr1_4:60096837-60096856 Msa0174440:intron 25.0%
!!! TTTTGGTTAGTTGTTTGTTA+TGG + chr1_4:60096854-60096873 Msa0174440:intron 25.0%
!! TATCATTTTCTCTCTGATAT+TGG + chr1_4:60096990-60097009 Msa0174440:intron 25.0%
! TCTTTGTAATGTTCTTAACA+AGG + chr1_4:60097203-60097222 Msa0174440:CDS 25.0%
! AGTAAATCAAATCAAGACTA+TGG - chr1_4:60097256-60097275 None:intergenic 25.0%
! AAATACTGAAAAGCAGATAA+TGG - chr1_4:60097381-60097400 None:intergenic 25.0%
! TGAAAATGTTAGAAACTTTC+TGG + chr1_4:60097401-60097420 Msa0174440:CDS 25.0%
! ATCAAATACAAAACCCTATT+TGG + chr1_4:60098124-60098143 Msa0174440:intron 25.0%
! TTAAACGGTTTATCCAAATA+GGG - chr1_4:60098140-60098159 None:intergenic 25.0%
! ATTAAACGGTTTATCCAAAT+AGG - chr1_4:60098141-60098160 None:intergenic 25.0%
!! GTATCTAAAACAGTCATTAA+GGG + chr1_4:60098259-60098278 Msa0174440:intron 25.0%
!! TATCTAAAACAGTCATTAAG+GGG + chr1_4:60098260-60098279 Msa0174440:intron 25.0%
! AATAACCAATTCTGCATTTA+GGG - chr1_4:60098342-60098361 None:intergenic 25.0%
!! CTTTAAGAAAGTAATCTCAA+AGG - chr1_4:60098448-60098467 None:intergenic 25.0%
!! AGCAAAGTATTTACCTAAAT+TGG - chr1_4:60099164-60099183 None:intergenic 25.0%
! GTGAAAACTAAAATATGATG+AGG - chr1_4:60099250-60099269 None:intergenic 25.0%
!! AAGGTTAACTTTGTTTAATC+AGG + chr1_4:60099456-60099475 Msa0174440:intron 25.0%
!!! TTGTTTAATCAGGAAGTATT+AGG + chr1_4:60099466-60099485 Msa0174440:intron 25.0%
!!! TGTTTAATCAGGAAGTATTA+GGG + chr1_4:60099467-60099486 Msa0174440:intron 25.0%
! CTAAAATATAGTAATCTTGC+AGG - chr1_4:60099682-60099701 None:intergenic 25.0%
!!! ATTTTTTGTCTATTGTGTTC+AGG + chr1_4:60099713-60099732 Msa0174440:intron 25.0%
!!! TTTTTTGTCTATTGTGTTCA+GGG + chr1_4:60099714-60099733 Msa0174440:intron 25.0%
! AATGTTTGCATATTTGCTTA+CGG + chr1_4:60099788-60099807 Msa0174440:CDS 25.0%
!! AATTTTGTTGAAATGCAGAA+CGG + chr1_4:60099893-60099912 Msa0174440:intron 25.0%
! TCTAATGTATGAATGGTTAA+GGG - chr1_4:60100303-60100322 None:intergenic 25.0%
! TTCTAATGTATGAATGGTTA+AGG - chr1_4:60100304-60100323 None:intergenic 25.0%
! ACGAATTTCTAATGTATGAA+TGG - chr1_4:60100310-60100329 None:intergenic 25.0%
! TGTTATTGAACTAATGAACT+TGG + chr1_4:60100395-60100414 Msa0174440:CDS 25.0%
! GTTATTGAACTAATGAACTT+GGG + chr1_4:60100396-60100415 Msa0174440:CDS 25.0%
! TGATAGAATTGTATAACTGA+GGG - chr1_4:60100886-60100905 None:intergenic 25.0%
! ATGATAGAATTGTATAACTG+AGG - chr1_4:60100887-60100906 None:intergenic 25.0%
!!! TGTTTTTCATTATGTTGCTT+GGG + chr1_4:60100912-60100931 Msa0174440:intron 25.0%
! TAAGACTATTATGAAGAACT+AGG - chr1_4:60101134-60101153 None:intergenic 25.0%
! AGATATCAATAAGAAATAGC+CGG - chr1_4:60101494-60101513 None:intergenic 25.0%
! ACCCAGCAAAAAAATATATA+TGG - chr1_4:60102539-60102558 None:intergenic 25.0%
! TGTTGTATTTACACAGATAA+TGG + chr1_4:60102584-60102603 Msa0174440:three_prime_UTR 25.0%
! TTATTAACATTAGAGCTTTC+AGG + chr1_4:60102648-60102667 Msa0174440:three_prime_UTR 25.0%
TCTCTCTATGATCTTATAGT+TGG - chr1_4:60096683-60096702 None:intergenic 30.0%
TCGTCTTAAAGATCTTGATT+TGG + chr1_4:60096935-60096954 Msa0174440:CDS 30.0%
!!! TCTGTATTTTCTTTAGGTTG+TGG + chr1_4:60097317-60097336 Msa0174440:intron 30.0%
AAATGTTAGAAACTTTCTGG+TGG + chr1_4:60097404-60097423 Msa0174440:CDS 30.0%
! GATCTAGAACAAGTATGTAA+AGG + chr1_4:60097465-60097484 Msa0174440:intron 30.0%
!!! TTGATTCATGTTTTTTAGGG+AGG + chr1_4:60097631-60097650 Msa0174440:intron 30.0%
CCATTCACTATAGGATTTAA+GGG - chr1_4:60097689-60097708 None:intergenic 30.0%
TCCATTCACTATAGGATTTA+AGG - chr1_4:60097690-60097709 None:intergenic 30.0%
! AGTTTGTTTCCATTCACTAT+AGG - chr1_4:60097698-60097717 None:intergenic 30.0%
TATAGTGAATGGAAACAAAC+TGG + chr1_4:60097697-60097716 Msa0174440:CDS 30.0%
ATAGTGAATGGAAACAAACT+GGG + chr1_4:60097698-60097717 Msa0174440:CDS 30.0%
CTTGACAAAGAATTGGTAAA+TGG - chr1_4:60097802-60097821 None:intergenic 30.0%
CATTTACCAATTCTTTGTCA+AGG + chr1_4:60097800-60097819 Msa0174440:CDS 30.0%
! AGATTTTTCATTGATGGAAG+AGG - chr1_4:60097827-60097846 None:intergenic 30.0%
! AGTCACAGATTTTTCATTGA+TGG - chr1_4:60097833-60097852 None:intergenic 30.0%
TGATGTCGAGTCTAATAAAA+TGG + chr1_4:60097864-60097883 Msa0174440:CDS 30.0%
! TATGTGCTATGATTTTGTCT+AGG + chr1_4:60097914-60097933 Msa0174440:intron 30.0%
AGCTTATACATAAGCACTTA+TGG - chr1_4:60098176-60098195 None:intergenic 30.0%
! GGTATCTAAAACAGTCATTA+AGG + chr1_4:60098258-60098277 Msa0174440:intron 30.0%
CAATAACCAATTCTGCATTT+AGG - chr1_4:60098343-60098362 None:intergenic 30.0%
AGTAATATTGTTCTTCTGCA+TGG + chr1_4:60098466-60098485 Msa0174440:intron 30.0%
TAGCTAATGGCATTACTTAA+AGG - chr1_4:60098581-60098600 None:intergenic 30.0%
AATGCTTGATTCTTATACTG+TGG + chr1_4:60098829-60098848 Msa0174440:intron 30.0%
TTGTTATCCACCTAATCAAT+CGG - chr1_4:60098858-60098877 None:intergenic 30.0%
TTCCTACAAAAACACAAAGA+TGG - chr1_4:60099071-60099090 None:intergenic 30.0%
! TAGTTTTCACCTCTCTTTAT+AGG + chr1_4:60099260-60099279 Msa0174440:intron 30.0%
CTTAAGGGTAATAAGATTAC+TGG + chr1_4:60099371-60099390 Msa0174440:CDS 30.0%
ATTAATGTTCCCTCAAAGAA+TGG + chr1_4:60099573-60099592 Msa0174440:CDS 30.0%
TTAATGTTCCCTCAAAGAAT+GGG + chr1_4:60099574-60099593 Msa0174440:CDS 30.0%
AAAGACTTTGTTGAAGTTGA+AGG - chr1_4:60099613-60099632 None:intergenic 30.0%
TTCAACTTCAACAAAGTCTT+TGG + chr1_4:60099612-60099631 Msa0174440:CDS 30.0%
! TTTTTGTCTATTGTGTTCAG+GGG + chr1_4:60099715-60099734 Msa0174440:intron 30.0%
! AGAACGGACTTAAAAAACAA+TGG + chr1_4:60099909-60099928 Msa0174440:intron 30.0%
! TTCGTATTTGAAATGTAGAC+TGG + chr1_4:60099986-60100005 Msa0174440:intron 30.0%
!!! CTTTTTTCTGTGATCTCTTT+TGG - chr1_4:60100013-60100032 None:intergenic 30.0%
TTATACAGCGAATCAAAGAA+AGG + chr1_4:60100069-60100088 Msa0174440:CDS 30.0%
ACAATGAAAACAGCCTTTAT+TGG + chr1_4:60100268-60100287 Msa0174440:intron 30.0%
!! TTGTTGATGATACTTGAACA+AGG - chr1_4:60100371-60100390 None:intergenic 30.0%
TGGATAACAGGACAATAAAT+AGG - chr1_4:60100490-60100509 None:intergenic 30.0%
AAATGTCACAAAAACAGTTG+TGG - chr1_4:60100510-60100529 None:intergenic 30.0%
TAACAAATCTCTTTCAGCTT+TGG + chr1_4:60100722-60100741 Msa0174440:CDS 30.0%
AACAAATCTCTTTCAGCTTT+GGG + chr1_4:60100723-60100742 Msa0174440:CDS 30.0%
!! TGAGTTTGCTATTTCTGTAA+GGG - chr1_4:60100788-60100807 None:intergenic 30.0%
AAAACTTACCAAGTGAATCT+TGG - chr1_4:60100821-60100840 None:intergenic 30.0%
!!! TCACTTGGTAAGTTTTAAGT+TGG + chr1_4:60100825-60100844 Msa0174440:intron 30.0%
! GTGTTTTTCATTATGTTGCT+TGG + chr1_4:60100911-60100930 Msa0174440:intron 30.0%
!! TTTTATTTGGATGATCCCTT+TGG + chr1_4:60101465-60101484 Msa0174440:intron 30.0%
TTTGAACAAGACTATTCACT+GGG - chr1_4:60101624-60101643 None:intergenic 30.0%
! TTTTGAACAAGACTATTCAC+TGG - chr1_4:60101625-60101644 None:intergenic 30.0%
!! TAGTCTTGTTCAAAATTGTG+TGG + chr1_4:60101630-60101649 Msa0174440:CDS 30.0%
TCCTATAATATGTTCATGAG+AGG + chr1_4:60101826-60101845 Msa0174440:CDS 30.0%
ATGTTCAAAATTGTATGCAC+AGG - chr1_4:60102229-60102248 None:intergenic 30.0%
TTGACATGAAACGTAAAACT+GGG + chr1_4:60102384-60102403 Msa0174440:CDS 30.0%
CTCGAACTAAAAAATTGTGA+AGG - chr1_4:60102487-60102506 None:intergenic 30.0%
!!! CTTCACAATTTTTTAGTTCG+AGG + chr1_4:60102485-60102504 Msa0174440:three_prime_UTR 30.0%
! GATGATGTTTGGAACATAGT+GGG + chr1_4:60096440-60096459 Msa0174440:five_prime_UTR 35.0%
! ATGATGTTTGGAACATAGTG+GGG + chr1_4:60096441-60096460 Msa0174440:five_prime_UTR 35.0%
! ACTATCTCTCTTTGTTGCTT+CGG - chr1_4:60096504-60096523 None:intergenic 35.0%
AAGCAACAAAGAGAGATAGT+GGG + chr1_4:60096504-60096523 Msa0174440:five_prime_UTR 35.0%
TCTAGAAAATCAGAAGAAGC+TGG + chr1_4:60096960-60096979 Msa0174440:CDS 35.0%
TTAAGAAGATATGAAGCAGC+AGG + chr1_4:60097084-60097103 Msa0174440:CDS 35.0%
TAAGAAGATATGAAGCAGCA+GGG + chr1_4:60097085-60097104 Msa0174440:CDS 35.0%
TGTTCTTAACAAGGTTCATC+CGG + chr1_4:60097212-60097231 Msa0174440:CDS 35.0%
AATTGGAATTCCTACCTTTG+AGG + chr1_4:60097437-60097456 Msa0174440:CDS 35.0%
TTTAGGGAGGAAAATCATCA+AGG + chr1_4:60097644-60097663 Msa0174440:intron 35.0%
AAGGATTGTGAGTAGTGTAT+TGG + chr1_4:60097663-60097682 Msa0174440:CDS 35.0%
CCCTTAAATCCTATAGTGAA+TGG + chr1_4:60097686-60097705 Msa0174440:CDS 35.0%
TAGTGAATGGAAACAAACTG+GGG + chr1_4:60097699-60097718 Msa0174440:CDS 35.0%
GCTAATGGTGTATGGAAATT+TGG + chr1_4:60097721-60097740 Msa0174440:CDS 35.0%
AATGGTGTATGGAAATTTGG+TGG + chr1_4:60097724-60097743 Msa0174440:CDS 35.0%
! AAAGATTTTGCAGTGATTGC+TGG - chr1_4:60097760-60097779 None:intergenic 35.0%
CAAAGAATTGGTAAATGGCT+CGG - chr1_4:60097797-60097816 None:intergenic 35.0%
TTTATTAGACTCGACATCAG+AGG - chr1_4:60097863-60097882 None:intergenic 35.0%
GTCGAGTCTAATAAAATGGT+TGG + chr1_4:60097868-60097887 Msa0174440:intron 35.0%
! ATGATTTTGTCTAGGTGAGA+AGG + chr1_4:60097922-60097941 Msa0174440:intron 35.0%
!! CAGTCTAGTTCTCATTCTTT+AGG + chr1_4:60097982-60098001 Msa0174440:intron 35.0%
! TGTTCTTTTGTGTCTCACAT+AGG + chr1_4:60098075-60098094 Msa0174440:intron 35.0%
TGTGCATCTAAAAATTGGAC+AGG + chr1_4:60098237-60098256 Msa0174440:intron 35.0%
!!! TCTCTTCCTTTTAGTTTCTG+TGG + chr1_4:60098283-60098302 Msa0174440:intron 35.0%
AAATGGCCACAGAAACTAAA+AGG - chr1_4:60098292-60098311 None:intergenic 35.0%
! ACAGTTGGTTGAATCTGTTT+TGG + chr1_4:60098490-60098509 Msa0174440:intron 35.0%
AGTATCATACCAGTTCATCT+TGG - chr1_4:60098553-60098572 None:intergenic 35.0%
AGTGAAATGTCTCAAAGAGA+TGG + chr1_4:60098718-60098737 Msa0174440:CDS 35.0%
! AGCTGTAGCAAAGTTTTCTA+TGG + chr1_4:60098741-60098760 Msa0174440:CDS 35.0%
! GTTTTCTATGGCACGTAAAA+AGG + chr1_4:60098753-60098772 Msa0174440:CDS 35.0%
TCCTATGGTAACAAAGAAAG+AGG + chr1_4:60098881-60098900 Msa0174440:CDS 35.0%
TCCTCTTTCTTTGTTACCAT+AGG - chr1_4:60098885-60098904 None:intergenic 35.0%
AGCAAATGCTCTTTGATCAA+CGG + chr1_4:60098961-60098980 Msa0174440:CDS 35.0%
!! TGCCATCTTTGTGTTTTTGT+AGG + chr1_4:60099066-60099085 Msa0174440:intron 35.0%
CATGCAAATGAAATTTCACG+AGG + chr1_4:60099132-60099151 Msa0174440:CDS 35.0%
TTTATAGGCATGCACATTCA+CGG + chr1_4:60099275-60099294 Msa0174440:intron 35.0%
CAAACTATACAATGAAGTCC+AGG + chr1_4:60099346-60099365 Msa0174440:CDS 35.0%
AATGAAGTCCAGGATCTTAA+GGG + chr1_4:60099356-60099375 Msa0174440:CDS 35.0%
TCTTATTACCCTTAAGATCC+TGG - chr1_4:60099367-60099386 None:intergenic 35.0%
AGGGTAATAAGATTACTGGT+TGG + chr1_4:60099375-60099394 Msa0174440:intron 35.0%
! TAATAAGATTACTGGTTGGC+TGG + chr1_4:60099379-60099398 Msa0174440:intron 35.0%
TTTGGTTGTCCAGATAAGAA+AGG - chr1_4:60099510-60099529 None:intergenic 35.0%
CAGGTAAGAGATAACTGAAA+AGG - chr1_4:60099663-60099682 None:intergenic 35.0%
! AAGTTTTTCCTGATCCTGTT+TGG - chr1_4:60099814-60099833 None:intergenic 35.0%
ATCAGGAAAAACTTTCACCA+TGG + chr1_4:60099820-60099839 Msa0174440:CDS 35.0%
ACTTCAACTGTATCTTACCA+TGG - chr1_4:60099840-60099859 None:intergenic 35.0%
AAAGCCAAGGTGTAAATTAC+AGG + chr1_4:60100029-60100048 Msa0174440:CDS 35.0%
AAGCCAAGGTGTAAATTACA+GGG + chr1_4:60100030-60100049 Msa0174440:CDS 35.0%
! AGAGATCTATTGGTTACTGA+TGG + chr1_4:60100148-60100167 Msa0174440:CDS 35.0%
ATGAAAACAGCCTTTATTGG+TGG + chr1_4:60100271-60100290 Msa0174440:intron 35.0%
ATTCGTAGTAACTCTCAAAG+AGG + chr1_4:60100324-60100343 Msa0174440:CDS 35.0%
TTCGTAGTAACTCTCAAAGA+GGG + chr1_4:60100325-60100344 Msa0174440:CDS 35.0%
CAAAAACAGTTGTGGATAAC+AGG - chr1_4:60100502-60100521 None:intergenic 35.0%
!!! ATGTTGGTTTTTCTGAGCAA+GGG - chr1_4:60100763-60100782 None:intergenic 35.0%
! TATTTCTGTAAGGGACATGT+TGG - chr1_4:60100779-60100798 None:intergenic 35.0%
!! GTGAGTTTGCTATTTCTGTA+AGG - chr1_4:60100789-60100808 None:intergenic 35.0%
CAATTACTCCAAGATTCACT+TGG + chr1_4:60100810-60100829 Msa0174440:CDS 35.0%
GTGAACAAACATTAGTGTCT+TGG - chr1_4:60100957-60100976 None:intergenic 35.0%
! AATTGTTTCTCCAACAGCAT+TGG - chr1_4:60100993-60101012 None:intergenic 35.0%
GACTATTATGAAGAACTAGG+AGG - chr1_4:60101131-60101150 None:intergenic 35.0%
TAAACTTAACTGACGCAGTA+AGG - chr1_4:60101162-60101181 None:intergenic 35.0%
TTGAGTTCTTTGTCTCGATA+TGG - chr1_4:60101557-60101576 None:intergenic 35.0%
TTGAACAAGACTATTCACTG+GGG - chr1_4:60101623-60101642 None:intergenic 35.0%
AAATTGTGTGGAAGACGATA+AGG + chr1_4:60101642-60101661 Msa0174440:CDS 35.0%
AAGTTAGATGTGAACAAGAC+TGG + chr1_4:60101706-60101725 Msa0174440:CDS 35.0%
AACAAGACTGGTAACATGTT+AGG + chr1_4:60101718-60101737 Msa0174440:CDS 35.0%
ACAAGACTGGTAACATGTTA+GGG + chr1_4:60101719-60101738 Msa0174440:CDS 35.0%
!! AGATAATGGGAACTTATCTG+AGG + chr1_4:60101753-60101772 Msa0174440:CDS 35.0%
GCCTCTCATGAACATATTAT+AGG - chr1_4:60101830-60101849 None:intergenic 35.0%
TCTTCTTTAGTAATGCTCGT+AGG + chr1_4:60102044-60102063 Msa0174440:intron 35.0%
CTTCTTTAGTAATGCTCGTA+GGG + chr1_4:60102045-60102064 Msa0174440:intron 35.0%
CCATTTGTTTGTTTCCTTGA+AGG - chr1_4:60102326-60102345 None:intergenic 35.0%
CCTTCAAGGAAACAAACAAA+TGG + chr1_4:60102323-60102342 Msa0174440:CDS 35.0%
! GTTTTACGTTTCATGTCAAC+TGG - chr1_4:60102383-60102402 None:intergenic 35.0%
GTTGACATGAAACGTAAAAC+TGG + chr1_4:60102383-60102402 Msa0174440:CDS 35.0%
! GGATGATGTTTGGAACATAG+TGG + chr1_4:60096439-60096458 Msa0174440:five_prime_UTR 40.0%
GAAGCAACAAAGAGAGATAG+TGG + chr1_4:60096503-60096522 Msa0174440:five_prime_UTR 40.0%
! TTTAGGCTTGGTTTGAGAAG+TGG + chr1_4:60097174-60097193 Msa0174440:CDS 40.0%
! TTAGGCTTGGTTTGAGAAGT+GGG + chr1_4:60097175-60097194 Msa0174440:CDS 40.0%
GTTCTTAACAAGGTTCATCC+GGG + chr1_4:60097213-60097232 Msa0174440:CDS 40.0%
AATCAAGACTATGGTCACCT+TGG - chr1_4:60097247-60097266 None:intergenic 40.0%
AGGTAGGAATTCCAATTTCC+TGG - chr1_4:60097434-60097453 None:intergenic 40.0%
TTCTAGATCAGATGCCTCAA+AGG - chr1_4:60097454-60097473 None:intergenic 40.0%
AGAGGTCCTTGACAAAGAAT+TGG - chr1_4:60097809-60097828 None:intergenic 40.0%
! ATTTTGTCTAGGTGAGAAGG+CGG + chr1_4:60097925-60097944 Msa0174440:intron 40.0%
GAGAAGGCGGAATAACTAAA+TGG + chr1_4:60097938-60097957 Msa0174440:intron 40.0%
TTCCTACGGTAAGGACTAAA+TGG + chr1_4:60098049-60098068 Msa0174440:intron 40.0%
ATCCATTTAGTCCTTACCGT+AGG - chr1_4:60098054-60098073 None:intergenic 40.0%
AGCGTTTCAGGAAAACGAAA+TGG - chr1_4:60098309-60098328 None:intergenic 40.0%
CTAGTGCAGTACTACTAGAT+GGG - chr1_4:60098371-60098390 None:intergenic 40.0%
ACTAGTGCAGTACTACTAGA+TGG - chr1_4:60098372-60098391 None:intergenic 40.0%
CATTACAAGCCAAGATGAAC+TGG + chr1_4:60098541-60098560 Msa0174440:CDS 40.0%
ACTGTGGTTTCCGATTGATT+AGG + chr1_4:60098845-60098864 Msa0174440:intron 40.0%
GGTGGATAACAAGATTCCTA+TGG + chr1_4:60098866-60098885 Msa0174440:intron 40.0%
TAAAAACCATGTTGCTGACG+AGG + chr1_4:60098914-60098933 Msa0174440:CDS 40.0%
GGCAGAGAGATATTCAAGTA+GGG + chr1_4:60098982-60099001 Msa0174440:intron 40.0%
ATGTGCATGCCTATAAAGAG+AGG - chr1_4:60099272-60099291 None:intergenic 40.0%
CAATGAAGTCCAGGATCTTA+AGG + chr1_4:60099355-60099374 Msa0174440:CDS 40.0%
CGAGTAAGACCTTTCTTATC+TGG + chr1_4:60099498-60099517 Msa0174440:CDS 40.0%
ACCATCTTCTATGTTCTCCA+CGG - chr1_4:60099544-60099563 None:intergenic 40.0%
TTCCCTCAAAGAATGGGAAA+GGG + chr1_4:60099580-60099599 Msa0174440:CDS 40.0%
CTGAAAAGGAAACCAACCTT+GGG - chr1_4:60099649-60099668 None:intergenic 40.0%
ACTGAAAAGGAAACCAACCT+TGG - chr1_4:60099650-60099669 None:intergenic 40.0%
ATATTTGCTTACGGCCAAAC+AGG + chr1_4:60099797-60099816 Msa0174440:CDS 40.0%
GAGATCACAGAAAAAAGCCA+AGG + chr1_4:60100016-60100035 Msa0174440:CDS 40.0%
TGAGCAAGTCAGAGATCTAT+TGG + chr1_4:60100138-60100157 Msa0174440:CDS 40.0%
AGGATATACACCTGTGAGAT+CGG - chr1_4:60100470-60100489 None:intergenic 40.0%
TGCTTGACTGTACATGTTCA+AGG + chr1_4:60100579-60100598 Msa0174440:CDS 40.0%
!!! CATGTTGGTTTTTCTGAGCA+AGG - chr1_4:60100764-60100783 None:intergenic 40.0%
! ATGTTGCTTGGGATAACTTC+AGG + chr1_4:60100923-60100942 Msa0174440:intron 40.0%
AGAGTTGCTACAGTTGAACT+TGG + chr1_4:60101034-60101053 Msa0174440:CDS 40.0%
CATTCTATATCTGGAAGCTC+TGG + chr1_4:60101251-60101270 Msa0174440:CDS 40.0%
GATATCATGGATGATCCCTT+TGG + chr1_4:60101332-60101351 Msa0174440:CDS 40.0%
AAGTTGCCAACATCAATCAC+TGG - chr1_4:60101368-60101387 None:intergenic 40.0%
GATTGATGTTGGCAACTTAG+AGG + chr1_4:60101370-60101389 Msa0174440:CDS 40.0%
CATTAACAAATTCACCACCC+TGG + chr1_4:60101596-60101615 Msa0174440:CDS 40.0%
TGAACAAGACTATTCACTGG+GGG - chr1_4:60101622-60101641 None:intergenic 40.0%
!! AGAGTGGGTTGATAAGGTTA+TGG + chr1_4:60101678-60101697 Msa0174440:CDS 40.0%
! TGGTAACATGTTAGGGTGTT+GGG + chr1_4:60101726-60101745 Msa0174440:CDS 40.0%
! GGATCGTTCTGAGTATACTT+TGG - chr1_4:60101809-60101828 None:intergenic 40.0%
! CCAGTTTAACATTGCTGGTT+CGG + chr1_4:60101852-60101871 Msa0174440:CDS 40.0%
GTCATGTTCTGATGAATCAC+TGG - chr1_4:60101905-60101924 None:intergenic 40.0%
!! CATCAGAACATGACTTGCTT+TGG + chr1_4:60101911-60101930 Msa0174440:CDS 40.0%
AAAGTTACAAGCGTAGCCAA+CGG + chr1_4:60101949-60101968 Msa0174440:CDS 40.0%
! CAGCTAAAAGCACAGAATTG+AGG + chr1_4:60102007-60102026 Msa0174440:CDS 40.0%
GTTTGTTTCCTTGAAGGTGA+AGG - chr1_4:60102320-60102339 None:intergenic 40.0%
! GTTTGGAACATAGTGGGGTT+CGG + chr1_4:60096446-60096465 Msa0174440:five_prime_UTR 45.0%
!! CAACAAAGAGAGATAGTGGG+AGG + chr1_4:60096507-60096526 Msa0174440:five_prime_UTR 45.0%
GTGTACAGAGCAAAAGCCAA+AGG + chr1_4:60096587-60096606 Msa0174440:five_prime_UTR 45.0%
!!! GGCAGCATTGTCATTTTCAG+TGG + chr1_4:60096875-60096894 Msa0174440:CDS 45.0%
TTCAGTGGCATCTGTTGTTG+AGG + chr1_4:60096890-60096909 Msa0174440:CDS 45.0%
GAGGATGTTCTTCAACAGCA+TGG + chr1_4:60096909-60096928 Msa0174440:CDS 45.0%
AGCAGGGTGGTTGAGAAAAA+TGG + chr1_4:60097101-60097120 Msa0174440:CDS 45.0%
GGGTGGTTGAGAAAAATGGT+TGG + chr1_4:60097105-60097124 Msa0174440:CDS 45.0%
! AGCCTTCTGAGGAAGAGTTT+AGG + chr1_4:60097157-60097176 Msa0174440:CDS 45.0%
AGCCTAAACTCTTCCTCAGA+AGG - chr1_4:60097162-60097181 None:intergenic 45.0%
TCTGAGGAAGAGTTTAGGCT+TGG + chr1_4:60097162-60097181 Msa0174440:CDS 45.0%
! GGGATTAGTGCAGAATCAAC+AGG - chr1_4:60097348-60097367 None:intergenic 45.0%
! AAACTTTCTGGTGGCTATCC+AGG + chr1_4:60097413-60097432 Msa0174440:CDS 45.0%
AGATCAGATGCCTCAAAGGT+AGG - chr1_4:60097450-60097469 None:intergenic 45.0%
TGGAAACAAACTGGGGCTAA+TGG + chr1_4:60097706-60097725 Msa0174440:CDS 45.0%
AAACTGGGGCTAATGGTGTA+TGG + chr1_4:60097713-60097732 Msa0174440:CDS 45.0%
GAAGCCAGAAGAAGTTCCTA+CGG + chr1_4:60098035-60098054 Msa0174440:CDS 45.0%
CTTACCGTAGGAACTTCTTC+TGG - chr1_4:60098042-60098061 None:intergenic 45.0%
CAGAAGAAGTTCCTACGGTA+AGG + chr1_4:60098040-60098059 Msa0174440:intron 45.0%
ATGCGCCCTAAATGCAGAAT+TGG + chr1_4:60098334-60098353 Msa0174440:intron 45.0%
GTTCTTCTGCATGGAACAGT+TGG + chr1_4:60098475-60098494 Msa0174440:intron 45.0%
!!! TGTTTTGGCGAAAGTCGTAG+AGG + chr1_4:60098505-60098524 Msa0174440:CDS 45.0%
GTGGTTTCCGATTGATTAGG+TGG + chr1_4:60098848-60098867 Msa0174440:intron 45.0%
CGGCAGAGAGATATTCAAGT+AGG + chr1_4:60098981-60099000 Msa0174440:intron 45.0%
ACAGTTCAAACCACCAAAGC+TGG + chr1_4:60099100-60099119 Msa0174440:CDS 45.0%
CATGAACTGCATACCAGCTT+TGG - chr1_4:60099116-60099135 None:intergenic 45.0%
CACGAGGAGTTCTCCAATTT+AGG + chr1_4:60099148-60099167 Msa0174440:CDS 45.0%
! ACCAAATCATTCGAGTACCG+TGG + chr1_4:60099524-60099543 Msa0174440:CDS 45.0%
TCCACGGTACTCGAATGATT+TGG - chr1_4:60099528-60099547 None:intergenic 45.0%
ACCGTGGAGAACATAGAAGA+TGG + chr1_4:60099540-60099559 Msa0174440:CDS 45.0%
GTTCCCTCAAAGAATGGGAA+AGG + chr1_4:60099579-60099598 Msa0174440:CDS 45.0%
TTGTCTATTGTGTTCAGGGG+AGG + chr1_4:60099718-60099737 Msa0174440:intron 45.0%
CTGATATGCAGCCACTTGTT+AGG + chr1_4:60099747-60099766 Msa0174440:CDS 45.0%
GAGCCCTGTAATTTACACCT+TGG - chr1_4:60100036-60100055 None:intergenic 45.0%
AGGGATAGCACCACCAATAA+AGG - chr1_4:60100284-60100303 None:intergenic 45.0%
ACTTGAACAAGGCTTGCATC+TGG - chr1_4:60100360-60100379 None:intergenic 45.0%
CAAGGAAGAGACTTGACATC+TGG + chr1_4:60100597-60100616 Msa0174440:CDS 45.0%
! TGACATCTGGAGCTGTCTTA+CGG + chr1_4:60100610-60100629 Msa0174440:CDS 45.0%
! ATGCATGCATCTCGTTGACT+TGG + chr1_4:60100635-60100654 Msa0174440:CDS 45.0%
TTGCTTGGGATAACTTCAGG+AGG + chr1_4:60100926-60100945 Msa0174440:intron 45.0%
GTTTGTTCACATTAGTCCCG+AGG + chr1_4:60100967-60100986 Msa0174440:CDS 45.0%
CGTCAAAGAGCTCAAAGAAC+AGG + chr1_4:60101087-60101106 Msa0174440:CDS 45.0%
! TAAGGCTGGCAATCTGAAAC+AGG - chr1_4:60101196-60101215 None:intergenic 45.0%
GTTTCAGATTGCCAGCCTTA+AGG + chr1_4:60101196-60101215 Msa0174440:intron 45.0%
TTCTTGCCAATGCTGCCTTA+AGG - chr1_4:60101214-60101233 None:intergenic 45.0%
!! TAAGGCAGCATTGGCAAGAA+AGG + chr1_4:60101214-60101233 Msa0174440:CDS 45.0%
!! CTGGAAGCTCTGGAAAATGT+AGG + chr1_4:60101261-60101280 Msa0174440:CDS 45.0%
! CTCTGGAAAATGTAGGACAG+CGG + chr1_4:60101268-60101287 Msa0174440:CDS 45.0%
! CAACATCAATCACTGGTTGC+CGG - chr1_4:60101361-60101380 None:intergenic 45.0%
AGAAATAGCCGGCATCCAAA+GGG - chr1_4:60101483-60101502 None:intergenic 45.0%
AAGAAATAGCCGGCATCCAA+AGG - chr1_4:60101484-60101503 None:intergenic 45.0%
GTGGAAGACGATAAGGAAAC+CGG + chr1_4:60101649-60101668 Msa0174440:CDS 45.0%
!! TACAGGAGAGTGGGTTGATA+AGG + chr1_4:60101672-60101691 Msa0174440:CDS 45.0%
CTGGTAACATGTTAGGGTGT+TGG + chr1_4:60101725-60101744 Msa0174440:CDS 45.0%
! GGTGTTGGGAAGCAGATAAT+GGG + chr1_4:60101740-60101759 Msa0174440:CDS 45.0%
GGCAACCAGTTTAACATTGC+TGG + chr1_4:60101847-60101866 Msa0174440:CDS 45.0%
CCGAACCAGCAATGTTAAAC+TGG - chr1_4:60101855-60101874 None:intergenic 45.0%
GGTAGCAGCATCAACATCAT+CGG - chr1_4:60101884-60101903 None:intergenic 45.0%
AGCCAACGGACATGAATCAA+AGG + chr1_4:60101963-60101982 Msa0174440:CDS 45.0%
GCCAACGGACATGAATCAAA+GGG + chr1_4:60101964-60101983 Msa0174440:CDS 45.0%
ACCCTTTGATTCATGTCCGT+TGG - chr1_4:60101968-60101987 None:intergenic 45.0%
ACGGACATGAATCAAAGGGT+AGG + chr1_4:60101968-60101987 Msa0174440:CDS 45.0%
TAATGCCCGTTGCTTGTACA+TGG + chr1_4:60102612-60102631 Msa0174440:three_prime_UTR 45.0%
TCATGCCATGTACAAGCAAC+GGG - chr1_4:60102620-60102639 None:intergenic 45.0%
GTCATGCCATGTACAAGCAA+CGG - chr1_4:60102621-60102640 None:intergenic 45.0%
CAACTCCTTCCCACATGCTT+CGG - chr1_4:60096474-60096493 None:intergenic 50.0%
!! AAGAGAGATAGTGGGAGGAG+AGG + chr1_4:60096512-60096531 Msa0174440:five_prime_UTR 50.0%
GAAGATATGAAGCAGCAGGG+TGG + chr1_4:60097088-60097107 Msa0174440:CDS 50.0%
TTTACCAGCAGAGCCTTCTG+AGG + chr1_4:60097146-60097165 Msa0174440:CDS 50.0%
TCATCCGGGTTCTGTATCCA+AGG + chr1_4:60097227-60097246 Msa0174440:CDS 50.0%
GTCACCTTGGATACAGAACC+CGG - chr1_4:60097234-60097253 None:intergenic 50.0%
GATTCTGCACTAATCCCCGA+TGG + chr1_4:60097351-60097370 Msa0174440:CDS 50.0%
! AGCAGATAATGGCGCTCCAT+CGG - chr1_4:60097370-60097389 None:intergenic 50.0%
CTGGTGGCTATCCAGGAAAT+TGG + chr1_4:60097420-60097439 Msa0174440:CDS 50.0%
!! GGCGCATTTTTCAGCGTTTC+AGG - chr1_4:60098321-60098340 None:intergenic 50.0%
! GAACTGCATACCAGCTTTGG+TGG - chr1_4:60099113-60099132 None:intergenic 50.0%
CGCCCTTTCCCATTCTTTGA+GGG - chr1_4:60099585-60099604 None:intergenic 50.0%
TCGAGCACAGACCTAACAAG+TGG - chr1_4:60099761-60099780 None:intergenic 50.0%
CTTGTTAGGTCTGTGCTCGA+TGG + chr1_4:60099761-60099780 Msa0174440:CDS 50.0%
TCGGCTGCTACGGTCATTAA+GGG - chr1_4:60100451-60100470 None:intergenic 50.0%
ATCGGCTGCTACGGTCATTA+AGG - chr1_4:60100452-60100471 None:intergenic 50.0%
! GACATCTGGAGCTGTCTTAC+GGG + chr1_4:60100611-60100630 Msa0174440:CDS 50.0%
! ACATCTGGAGCTGTCTTACG+GGG + chr1_4:60100612-60100631 Msa0174440:CDS 50.0%
!! ATGCATCTCGTTGACTTGGC+AGG + chr1_4:60100639-60100658 Msa0174440:CDS 50.0%
!! TTGACTTGGCAGGAAGTGAG+AGG + chr1_4:60100649-60100668 Msa0174440:CDS 50.0%
! TGACTTGGCAGGAAGTGAGA+GGG + chr1_4:60100650-60100669 Msa0174440:CDS 50.0%
TGAGAGGGTCGACAAATCTG+AGG + chr1_4:60100665-60100684 Msa0174440:CDS 50.0%
GACGGGCGATAGATTGAAAG+AGG + chr1_4:60100689-60100708 Msa0174440:CDS 50.0%
TGGGATAACTTCAGGAGGAC+AGG + chr1_4:60100931-60100950 Msa0174440:intron 50.0%
!! TTCTCCAACAGCATTGGCCT+CGG - chr1_4:60100987-60101006 None:intergenic 50.0%
!! GCAGCATTGGCAAGAAAGGA+AGG + chr1_4:60101218-60101237 Msa0174440:CDS 50.0%
CACCTTATCATGCAAGCCAG+CGG + chr1_4:60101303-60101322 Msa0174440:CDS 50.0%
ACCTTATCATGCAAGCCAGC+GGG + chr1_4:60101304-60101323 Msa0174440:CDS 50.0%
TGGATGATCCCTTTGGATGC+CGG + chr1_4:60101339-60101358 Msa0174440:CDS 50.0%
CGGCAACCAGTGATTGATGT+TGG + chr1_4:60101359-60101378 Msa0174440:CDS 50.0%
TGGATGATCCCTTTGGATGC+CGG + chr1_4:60101339-60101358 Msa0174440:CDS 50.0%
GACGATAAGGAAACCGGTAC+AGG + chr1_4:60101655-60101674 Msa0174440:CDS 50.0%
ATCAACCCACTCTCCTGTAC+CGG - chr1_4:60101671-60101690 None:intergenic 50.0%
!! GGGTGTTGGGAAGCAGATAA+TGG + chr1_4:60101739-60101758 Msa0174440:CDS 50.0%
ATTGTATGCACAGGCAGCAC+TGG - chr1_4:60102220-60102239 None:intergenic 50.0%
CTACTGCTCCTTCACCTTCA+AGG + chr1_4:60102309-60102328 Msa0174440:CDS 50.0%
TCGCACATCGAACACCAACA+AGG + chr1_4:60102348-60102367 Msa0174440:CDS 50.0%
CGTTTCATGTCAACTGGAGC+TGG - chr1_4:60102377-60102396 None:intergenic 50.0%
GGTTCGGAACCGAAGCATGT+GGG + chr1_4:60096462-60096481 Msa0174440:five_prime_UTR 55.0%
CGAAGCATGTGGGAAGGAGT+TGG + chr1_4:60096472-60096491 Msa0174440:five_prime_UTR 55.0%
TCTTCCTCAGAAGGCTCTGC+TGG - chr1_4:60097153-60097172 None:intergenic 55.0%
! CAGATAATGGCGCTCCATCG+GGG - chr1_4:60097368-60097387 None:intergenic 55.0%
! GCAGATAATGGCGCTCCATC+GGG - chr1_4:60097369-60097388 None:intergenic 55.0%
GTGACTCCTCGTCAGCAACA+TGG - chr1_4:60098923-60098942 None:intergenic 55.0%
TTGCTGACGAGGAGTCACAG+AGG + chr1_4:60098925-60098944 Msa0174440:CDS 55.0%
! GGCTTAGCTCATGCTGCTTC+TGG + chr1_4:60099296-60099315 Msa0174440:CDS 55.0%
GCGCCCTTTCCCATTCTTTG+AGG - chr1_4:60099586-60099605 None:intergenic 55.0%
TTTGGACCATCTGCAGCCCA+AGG + chr1_4:60099630-60099649 Msa0174440:CDS 55.0%
AACCAACCTTGGGCTGCAGA+TGG - chr1_4:60099639-60099658 None:intergenic 55.0%
GCTTACGGCCAAACAGGATC+AGG + chr1_4:60099803-60099822 Msa0174440:CDS 55.0%
ACCTGTGAGATCGGCTGCTA+CGG - chr1_4:60100461-60100480 None:intergenic 55.0%
! GGTCGACAAATCTGAGGCGA+CGG + chr1_4:60100671-60100690 Msa0174440:CDS 55.0%
! GTCGACAAATCTGAGGCGAC+GGG + chr1_4:60100672-60100691 Msa0174440:CDS 55.0%
!! TCTCCAACAGCATTGGCCTC+GGG - chr1_4:60100986-60101005 None:intergenic 55.0%
CTGCCCGAGTCAACAAGGAT+GGG + chr1_4:60101059-60101078 Msa0174440:CDS 55.0%
TGCCCGAGTCAACAAGGATG+GGG + chr1_4:60101060-60101079 Msa0174440:CDS 55.0%
!! TGCCCCATCCTTGTTGACTC+GGG - chr1_4:60101065-60101084 None:intergenic 55.0%
! CTGCCCCATCCTTGTTGACT+CGG - chr1_4:60101066-60101085 None:intergenic 55.0%
TGCCAGCCTTAAGGCAGCAT+TGG + chr1_4:60101205-60101224 Msa0174440:CDS 55.0%
TGCCAATGCTGCCTTAAGGC+TGG - chr1_4:60101210-60101229 None:intergenic 55.0%
GTAGGACAGCGGCTAGTGAA+CGG + chr1_4:60101279-60101298 Msa0174440:CDS 55.0%
ACTGGTTGCCGGCATCCAAA+GGG - chr1_4:60101350-60101369 None:intergenic 55.0%
AGACTATTCACTGGGGGCCA+GGG - chr1_4:60101616-60101635 None:intergenic 55.0%
AAGACTATTCACTGGGGGCC+AGG - chr1_4:60101617-60101636 None:intergenic 55.0%
AGGAAACCGGTACAGGAGAG+TGG + chr1_4:60101662-60101681 Msa0174440:CDS 55.0%
GGAAACCGGTACAGGAGAGT+GGG + chr1_4:60101663-60101682 Msa0174440:CDS 55.0%
ACTGGAGCTGGTTGCCTTGT+TGG - chr1_4:60102365-60102384 None:intergenic 55.0%
GGGTTCGGAACCGAAGCATG+TGG + chr1_4:60096461-60096480 Msa0174440:five_prime_UTR 60.0%
CGGAACCGAAGCATGTGGGA+AGG + chr1_4:60096466-60096485 Msa0174440:five_prime_UTR 60.0%
GACCATCTGCAGCCCAAGGT+TGG + chr1_4:60099634-60099653 Msa0174440:intron 60.0%
ACCGTAGCAGCCGATCTCAC+AGG + chr1_4:60100457-60100476 Msa0174440:CDS 60.0%
AGTCCCGAGGCCAATGCTGT+TGG + chr1_4:60100980-60100999 Msa0174440:CDS 60.0%
!! TGGTGCTGCCCGAGTCAACA+AGG + chr1_4:60101054-60101073 Msa0174440:CDS 60.0%
GCTGCCCGAGTCAACAAGGA+TGG + chr1_4:60101058-60101077 Msa0174440:CDS 60.0%
!! GCCCGCTGGCTTGCATGATA+AGG - chr1_4:60101308-60101327 None:intergenic 60.0%
CCATGATATCTGCAGCCCGC+TGG - chr1_4:60101322-60101341 None:intergenic 60.0%
!! CCAGCGGGCTGCAGATATCA+TGG + chr1_4:60101319-60101338 Msa0174440:CDS 60.0%
! CACTGGTTGCCGGCATCCAA+AGG - chr1_4:60101351-60101370 None:intergenic 60.0%
CTATTCACTGGGGGCCAGGG+TGG - chr1_4:60101613-60101632 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 60096433 60102743 60096433 ID=Msa0174440;Name=Msa0174440
chr1_4 mRNA 60096433 60102743 60096433 ID=Msa0174440-mRNA-1;Parent=Msa0174440;Name=Msa0174440-mRNA-1;_AED=0.14;_eAED=0.14;_QI=185|0.63|0.55|1|0.94|0.9|20|325|1035
chr1_4 exon 60096433 60096608 60096433 ID=Msa0174440-mRNA-1:exon:18926;Parent=Msa0174440-mRNA-1
chr1_4 exon 60096864 60096981 60096864 ID=Msa0174440-mRNA-1:exon:18927;Parent=Msa0174440-mRNA-1
chr1_4 exon 60097082 60097248 60097082 ID=Msa0174440-mRNA-1:exon:18928;Parent=Msa0174440-mRNA-1
chr1_4 exon 60097333 60097476 60097333 ID=Msa0174440-mRNA-1:exon:18929;Parent=Msa0174440-mRNA-1
chr1_4 exon 60097649 60097885 60097649 ID=Msa0174440-mRNA-1:exon:18930;Parent=Msa0174440-mRNA-1
chr1_4 exon 60097985 60098056 60097985 ID=Msa0174440-mRNA-1:exon:18931;Parent=Msa0174440-mRNA-1
chr1_4 exon 60098494 60098562 60098494 ID=Msa0174440-mRNA-1:exon:18932;Parent=Msa0174440-mRNA-1
chr1_4 exon 60098658 60098774 60098658 ID=Msa0174440-mRNA-1:exon:18933;Parent=Msa0174440-mRNA-1
chr1_4 exon 60098867 60098998 60098867 ID=Msa0174440-mRNA-1:exon:18934;Parent=Msa0174440-mRNA-1
chr1_4 exon 60099088 60099169 60099088 ID=Msa0174440-mRNA-1:exon:18935;Parent=Msa0174440-mRNA-1
chr1_4 exon 60099282 60099392 60099282 ID=Msa0174440-mRNA-1:exon:18936;Parent=Msa0174440-mRNA-1
chr1_4 exon 60099478 60099651 60099478 ID=Msa0174440-mRNA-1:exon:18937;Parent=Msa0174440-mRNA-1
chr1_4 exon 60099735 60099841 60099735 ID=Msa0174440-mRNA-1:exon:18938;Parent=Msa0174440-mRNA-1
chr1_4 exon 60100004 60100193 60100004 ID=Msa0174440-mRNA-1:exon:18939;Parent=Msa0174440-mRNA-1
chr1_4 exon 60100322 60100478 60100322 ID=Msa0174440-mRNA-1:exon:18940;Parent=Msa0174440-mRNA-1
chr1_4 exon 60100578 60100831 60100578 ID=Msa0174440-mRNA-1:exon:18941;Parent=Msa0174440-mRNA-1
chr1_4 exon 60100945 60101108 60100945 ID=Msa0174440-mRNA-1:exon:18942;Parent=Msa0174440-mRNA-1
chr1_4 exon 60101203 60101406 60101203 ID=Msa0174440-mRNA-1:exon:18943;Parent=Msa0174440-mRNA-1
chr1_4 exon 60101541 60102028 60101541 ID=Msa0174440-mRNA-1:exon:18944;Parent=Msa0174440-mRNA-1
chr1_4 exon 60102289 60102743 60102289 ID=Msa0174440-mRNA-1:exon:18945;Parent=Msa0174440-mRNA-1
chr1_4 five_prime_UTR 60096433 60096608 60096433 ID=Msa0174440-mRNA-1:five_prime_utr;Parent=Msa0174440-mRNA-1
chr1_4 five_prime_UTR 60096864 60096872 60096864 ID=Msa0174440-mRNA-1:five_prime_utr;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60096873 60096981 60096873 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60097082 60097248 60097082 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60097333 60097476 60097333 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60097649 60097885 60097649 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60097985 60098056 60097985 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60098494 60098562 60098494 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60098658 60098774 60098658 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60098867 60098998 60098867 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60099088 60099169 60099088 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60099282 60099392 60099282 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60099478 60099651 60099478 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60099735 60099841 60099735 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60100004 60100193 60100004 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60100322 60100478 60100322 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60100578 60100831 60100578 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60100945 60101108 60100945 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60101203 60101406 60101203 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60101541 60102028 60101541 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 CDS 60102289 60102418 60102289 ID=Msa0174440-mRNA-1:cds;Parent=Msa0174440-mRNA-1
chr1_4 three_prime_UTR 60102419 60102743 60102419 ID=Msa0174440-mRNA-1:three_prime_utr;Parent=Msa0174440-mRNA-1
Gene Sequence

>Msa0174440

ATGGCAGCATTGTCATTTTCAGTGGCATCTGTTGTTGAGGATGTTCTTCAACAGCATGGTACTCGTCTTAAAGATCTTGATTTGGAATCTAGAAAATCAGAAGAAGCTGCATTAAGAAGATATGAAGCAGCAGGGTGGTTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCTTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTTTGTAATGTTCTTAACAAGGTTCATCCGGGTTCTGTATCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTAATCCCCGATGGAGCGCCATTATCTGCTTTTCAGTATTTTGAAAATGTTAGAAACTTTCTGGTGGCTATCCAGGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTAGAACAAGGAGGAAAATCATCAAGGATTGTGAGTAGTGTATTGGCCCTTAAATCCTATAGTGAATGGAAACAAACTGGGGCTAATGGTGTATGGAAATTTGGTGGAACTATCAAACCAGCAATCACTGCAAAATCTTTTGTGAGAAAAAACTCCGAGCCATTTACCAATTCTTTGTCAAGGACCTCTTCCATCAATGAAAAATCTGTGACTTCTTTTACCTCTGATGTCGAGTCTAATAAAATGTCTAGTTCTCATTCTTTAGGTATGCTTGTTCGTGCAATACTTTTCGATAAGAAGCCAGAAGAAGTTCCTACGTTGGTTGAATCTGTTTTGGCGAAAGTCGTAGAGGAGTTTGAGCATCGCATTACAAGCCAAGATGAACTGAAGTTGTTTTTTACGACATGTTATTTATTATCGCGTAACACAGACAAAACAACTTCAAGAAGTGAAATGTCTCAAAGAGATGGAGCTGTAGCAAAGTTTTCTATGGCACGTAAAAAGGTGGATAACAAGATTCCTATGGTAACAAAGAAAGAGGAATTCATCTATAAAAACCATGTTGCTGACGAGGAGTCACAGAGGCAACTTCAGAAGCAGCAAATGCTCTTTGATCAACGGCAGAGAGATATTCAAGAATTAAAGCATACAGTTCAAACCACCAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCACGAGGAGTTCTCCAATTTAGGCATGCACATTCACGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTCGAAGAAAATCGCAAACTATACAATGAAGTCCAGGATCTTAAGGGTAATAAGATTACTGGAAGTATTAGGGTTTACTGTCGAGTAAGACCTTTCTTATCTGGACAACCAAATCATTCGAGTACCGTGGAGAACATAGAAGATGGTGTTATCACAATTAATGTTCCCTCAAAGAATGGGAAAGGGCGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAGCCCAAGGGGAGGTCTTCGCTGATATGCAGCCACTTGTTAGGTCTGTGCTCGATGGTTTTAATGTTTGCATATTTGCTTACGGCCAAACAGGATCAGGAAAAACTTTCACCATGACTGGACCAAAAGAGATCACAGAAAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGTGATCTATTTTATACAGCGAATCAAAGAAAGGACACTTTTCGCTATGATGTGTCTGTTCAGATGATTGAAATATATAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGAACAAACAAAAGATATCCTTTTAAAATTCGTAGTAACTCTCAAAGAGGGCTAAGTGTACCAGATGCAAGCCTTGTTCAAGTATCATCAACAAATGATGTTATTGAACTAATGAACTTGGGTCATAAGAACCGTGCAGTCGGAGCAACAGCCCTTAATGACCGTAGCAGCCGATCTCACAGTTGCTTGACTGTACATGTTCAAGGAAGAGACTTGACATCTGGAGCTGTCTTACGGGGATGCATGCATCTCGTTGACTTGGCAGGAAGTGAGAGGGTCGACAAATCTGAGGCGACGGGCGATAGATTGAAAGAGGCACAACATATTAACAAATCTCTTTCAGCTTTGGGTGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCTTACAGAAATAGCAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACACTAATGTTTGTTCACATTAGTCCCGAGGCCAATGCTGTTGGAGAAACAATTAGCACATTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCCCGAGTCAACAAGGATGGGGCAGACGTCAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAGGCAGCATTGGCAAGAAAGGAAGGAAATTTAGAACATTCTATATCTGGAAGCTCTGGAAAATGTAGGACAGCGGCTAGTGAACGGTCACCTTATCATGCAAGCCAGCGGGCTGCAGATATCATGGATGATCCCTTTGGATGCCGGCAACCAGTGATTGATGTTGGCAACTTAGAGGCATGTATATTTTTTCTTCAGAGCAATACCATATCGAGACAAAGAACTCAAAGCTTTGATTTTGATGAGACATTAACAAATTCACCACCCTGGCCCCCAGTGAATAGTCTTGTTCAAAATTGTGTGGAAGACGATAAGGAAACCGGTACAGGAGAGTGGGTTGATAAGGTTATGGTAAACAAGTTAGATGTGAACAAGACTGGTAACATGTTAGGGTGTTGGGAAGCAGATAATGGGAACTTATCTGAGGAATTTTATCAGAAATATCTTCAAGATTCTTCCAAAGTATACTCAGAACGATCCTATAATATGTTCATGAGAGGCAACCAGTTTAACATTGCTGGTTCGGATGACACCGATGATGTTGATGCTGCTACCAGTGATTCATCAGAACATGACTTGCTTTGGCAATTTAATCATTCAAAAGTTACAAGCGTAGCCAACGGACATGAATCAAAGGGTAGGAGATTTGTCTCAAAGTCAGCTAAAAGCACAGAATTGAGCAAGAATAGCATTCATTCTTCTACTGCTCCTTCACCTTCAAGGAAACAAACAAATGGTGTCGCACATCGAACACCAACAAGGCAACCAGCTCCAGTTGACATGAAACGTAAAACTGGGACTAGAAAGTGA
Protein sequence

>Msa0174440

MAALSFSVASVVEDVLQQHGTRLKDLDLESRKSEEAALRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVHPGSVSKVVESPVDSALIPDGAPLSAFQYFENVRNFLVAIQEIGIPTFEASDLEQGGKSSRIVSSVLALKSYSEWKQTGANGVWKFGGTIKPAITAKSFVRKNSEPFTNSLSRTSSINEKSVTSFTSDVESNKMSSSHSLGMLVRAILFDKKPEEVPTLVESVLAKVVEEFEHRITSQDELKLFFTTCYLLSRNTDKTTSRSEMSQRDGAVAKFSMARKKVDNKIPMVTKKEEFIYKNHVADEESQRQLQKQQMLFDQRQRDIQELKHTVQTTKAGMQFMQMKFHEEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGNKITGSIRVYCRVRPFLSGQPNHSSTVENIEDGVITINVPSKNGKGRRSFNFNKVFGPSAAQGEVFADMQPLVRSVLDGFNVCIFAYGQTGSGKTFTMTGPKEITEKSQGVNYRALSDLFYTANQRKDTFRYDVSVQMIEIYNEQVRDLLVTDGTNKRYPFKIRSNSQRGLSVPDASLVQVSSTNDVIELMNLGHKNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAVLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEANAVGETISTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALARKEGNLEHSISGSSGKCRTAASERSPYHASQRAADIMDDPFGCRQPVIDVGNLEACIFFLQSNTISRQRTQSFDFDETLTNSPPWPPVNSLVQNCVEDDKETGTGEWVDKVMVNKLDVNKTGNMLGCWEADNGNLSEEFYQKYLQDSSKVYSERSYNMFMRGNQFNIAGSDDTDDVDAATSDSSEHDLLWQFNHSKVTSVANGHESKGRRFVSKSAKSTELSKNSIHSSTAPSPSRKQTNGVAHRTPTRQPAPVDMKRKTGTRK*