Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419450 | XP_013461026.1 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419450 | sp|Q27GI3|NAT6_ARATH | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419450 | A0A072VA43 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0371190 | Msa0419450 | 0.934919 | 1.912719e-96 | -8.615850e-47 |
| Msa0382740 | Msa0419450 | 0.801842 | 7.438432e-49 | -8.615850e-47 |
| Msa0419450 | Msa0524320 | 0.813270 | 2.786387e-51 | -8.615850e-47 |
| Msa0419450 | Msa0524430 | 0.817916 | 2.572270e-52 | -8.615850e-47 |
| Msa0419450 | Msa0524800 | 0.801809 | 7.555835e-49 | -8.615850e-47 |
| Msa0419450 | Msa0525000 | 0.800836 | 1.195557e-48 | -8.615850e-47 |
| Msa0419450 | Msa0557850 | 0.805710 | 1.170572e-49 | -8.615850e-47 |
| Msa0419450 | Msa0562350 | 0.803695 | 3.083276e-49 | -8.615850e-47 |
| Msa0419450 | Msa0612520 | 0.811544 | 6.640419e-51 | -8.615850e-47 |
| Msa0419450 | Msa1212700 | 0.808974 | 2.378624e-50 | -8.615850e-47 |
| Msa0419450 | Msa1299980 | 0.828550 | 8.446724e-55 | -8.615850e-47 |
| Msa0419450 | Msa1331650 | 0.808270 | 3.362819e-50 | -8.615850e-47 |
| Msa0419450 | Msa1342810 | 0.831783 | 1.372648e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419450 | MtrunA17_Chr3g0117941 | 99.624 | 532 | 2 | 0 | 1 | 532 | 1 | 532 | 0.0 | 1068 |
| Msa0419450 | MtrunA17_Chr4g0059331 | 90.602 | 532 | 50 | 0 | 1 | 532 | 1 | 532 | 0.0 | 991 |
| Msa0419450 | MtrunA17_Chr8g0364611 | 81.051 | 533 | 100 | 1 | 1 | 532 | 1 | 533 | 0.0 | 891 |
| Msa0419450 | MtrunA17_Chr5g0414131 | 76.236 | 526 | 124 | 1 | 8 | 532 | 13 | 538 | 0.0 | 837 |
| Msa0419450 | MtrunA17_Chr3g0134911 | 55.615 | 561 | 204 | 4 | 9 | 532 | 33 | 585 | 0.0 | 643 |
| Msa0419450 | MtrunA17_Chr1g0207021 | 59.280 | 528 | 212 | 2 | 4 | 531 | 2 | 526 | 0.0 | 641 |
| Msa0419450 | MtrunA17_Chr8g0379171 | 59.653 | 518 | 207 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| Msa0419450 | MtrunA17_Chr5g0405471 | 57.196 | 535 | 211 | 2 | 13 | 532 | 31 | 562 | 0.0 | 627 |
| Msa0419450 | MtrunA17_Chr2g0284061 | 58.238 | 522 | 216 | 1 | 9 | 530 | 3 | 522 | 0.0 | 625 |
| Msa0419450 | MtrunA17_Chr3g0119521 | 59.417 | 515 | 206 | 2 | 17 | 530 | 6 | 518 | 0.0 | 612 |
| Msa0419450 | MtrunA17_Chr1g0154001 | 52.632 | 513 | 241 | 1 | 19 | 531 | 36 | 546 | 0.0 | 536 |
| Msa0419450 | MtrunA17_Chr8g0367361 | 35.046 | 545 | 312 | 6 | 17 | 529 | 234 | 768 | 1.21e-107 | 338 |
| Msa0419450 | MtrunA17_Chr5g0412181 | 36.486 | 518 | 291 | 4 | 40 | 525 | 182 | 693 | 6.98e-104 | 327 |
| Msa0419450 | MtrunA17_Chr2g0320981 | 34.990 | 523 | 296 | 6 | 43 | 529 | 164 | 678 | 2.88e-94 | 301 |
| Msa0419450 | MtrunA17_Chr4g0027121 | 34.857 | 525 | 295 | 7 | 43 | 529 | 171 | 686 | 3.86e-93 | 298 |
| Msa0419450 | MtrunA17_Chr2g0332871 | 32.400 | 500 | 300 | 6 | 46 | 529 | 166 | 643 | 2.01e-83 | 272 |
| Msa0419450 | MtrunA17_Chr8g0379181 | 50.909 | 55 | 27 | 0 | 411 | 465 | 13 | 67 | 4.39e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0419450 | AT5G62890.1 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Msa0419450 | AT5G62890.2 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Msa0419450 | AT5G62890.3 | 86.090 | 532 | 74 | 0 | 1 | 532 | 1 | 532 | 0.0 | 951 |
| Msa0419450 | AT5G49990.2 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0419450 | AT5G49990.3 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0419450 | AT5G49990.1 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0419450 | AT5G49990.4 | 80.228 | 526 | 104 | 0 | 7 | 532 | 3 | 528 | 0.0 | 862 |
| Msa0419450 | AT1G60030.1 | 76.952 | 525 | 121 | 0 | 8 | 532 | 14 | 538 | 0.0 | 851 |
| Msa0419450 | AT5G62890.4 | 85.652 | 460 | 66 | 0 | 1 | 460 | 1 | 460 | 0.0 | 810 |
| Msa0419450 | AT1G10540.1 | 68.587 | 538 | 162 | 3 | 1 | 531 | 1 | 538 | 0.0 | 777 |
| Msa0419450 | AT1G49960.1 | 61.111 | 522 | 203 | 0 | 10 | 531 | 4 | 525 | 0.0 | 649 |
| Msa0419450 | AT2G34190.1 | 58.880 | 518 | 211 | 1 | 13 | 530 | 7 | 522 | 0.0 | 633 |
| Msa0419450 | AT1G65550.1 | 55.198 | 529 | 228 | 2 | 10 | 531 | 14 | 540 | 0.0 | 616 |
| Msa0419450 | AT2G05760.1 | 57.282 | 515 | 217 | 2 | 17 | 530 | 6 | 518 | 0.0 | 605 |
| Msa0419450 | AT1G10540.2 | 68.041 | 388 | 117 | 3 | 1 | 381 | 1 | 388 | 0.0 | 543 |
| Msa0419450 | AT2G26510.1 | 51.257 | 517 | 245 | 3 | 18 | 531 | 36 | 548 | 1.74e-180 | 519 |
| Msa0419450 | AT5G25420.1 | 49.436 | 443 | 154 | 5 | 10 | 452 | 26 | 398 | 1.38e-143 | 420 |
| Msa0419450 | AT2G26510.3 | 52.861 | 367 | 167 | 2 | 18 | 381 | 36 | 399 | 1.98e-126 | 376 |
| Msa0419450 | AT2G26510.2 | 52.260 | 354 | 163 | 2 | 18 | 368 | 36 | 386 | 6.28e-120 | 360 |
| Msa0419450 | AT2G27810.1 | 35.509 | 521 | 297 | 5 | 43 | 529 | 186 | 701 | 7.11e-93 | 298 |
| Msa0419450 | AT4G38050.1 | 35.249 | 522 | 300 | 5 | 40 | 529 | 189 | 704 | 2.34e-92 | 297 |
| Msa0419450 | AT2G27810.4 | 34.312 | 545 | 295 | 7 | 43 | 529 | 186 | 725 | 3.43e-88 | 287 |
| Msa0419450 | AT2G27810.2 | 39.012 | 405 | 228 | 3 | 43 | 429 | 186 | 589 | 1.04e-78 | 258 |
| Msa0419450 | AT2G27810.3 | 39.106 | 358 | 199 | 3 | 43 | 382 | 186 | 542 | 5.15e-68 | 229 |
Find 155 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCACTGTGTAGGAAAATT+TGG | 0.153225 | 3_2:-67533519 | Msa0419450:intron |
| TTGGTTTCTCTTGTTGGTTT+TGG | 0.211154 | 3_2:-67535913 | Msa0419450:CDS |
| TGAACAGAATTTACAGAAAC+AGG | 0.258187 | 3_2:+67532572 | None:intergenic |
| GTTCCATTGGTTTCTCTTGT+TGG | 0.266604 | 3_2:-67535919 | Msa0419450:CDS |
| ATTAGGCTTCTCTATATTCT+TGG | 0.267261 | 3_2:-67533261 | Msa0419450:CDS |
| CAGAGAAAATGCTGGTCTTT+TGG | 0.280229 | 3_2:-67533707 | Msa0419450:CDS |
| TCACGATTACCTGCTGTAAT+TGG | 0.288965 | 3_2:-67536652 | Msa0419450:CDS |
| TTACATTTCCACCTCCCATC+TGG | 0.304347 | 3_2:+67536838 | None:intergenic |
| GGGGTCGGCATTCTTCTATC+TGG | 0.306602 | 3_2:-67533859 | Msa0419450:CDS |
| TTTAGAACAAAGTTCATATT+AGG | 0.323198 | 3_2:-67533278 | Msa0419450:CDS |
| GCAGCCGAGGCCATACTTCT+TGG | 0.336299 | 3_2:-67536921 | Msa0419450:intron |
| ACGTTGGTGCAAACACTCTT+TGG | 0.344409 | 3_2:-67536676 | Msa0419450:CDS |
| GAGCTTTCATTGCTGTATAT+AGG | 0.350680 | 3_2:-67534098 | Msa0419450:CDS |
| ATTCTTCTATCTGGATTGTT+TGG | 0.351515 | 3_2:-67533850 | Msa0419450:CDS |
| GTGCCACATGTGTTGCATTC+GGG | 0.351702 | 3_2:-67535571 | Msa0419450:CDS |
| TGCCTATTCTTTGCTTATGT+TGG | 0.351940 | 3_2:-67533450 | Msa0419450:intron |
| TTAGGCTTCTCTATATTCTT+GGG | 0.353632 | 3_2:-67533260 | Msa0419450:CDS |
| GCCACCTTCTATTCTTAGTC+GGG | 0.361786 | 3_2:-67534055 | Msa0419450:CDS |
| TACTAGGCTTTAGTGGCCTT+TGG | 0.362108 | 3_2:-67536207 | Msa0419450:CDS |
| GTAAATTCTGTTCAAGAAAG+TGG | 0.364812 | 3_2:-67532563 | Msa0419450:three_prime_UTR |
| TATACAGCAATCAATGGTTA+TGG | 0.366024 | 3_2:-67533209 | Msa0419450:CDS |
| CAAATAGTACTAGGCTTTAG+TGG | 0.377969 | 3_2:-67536214 | Msa0419450:CDS |
| CAATCAAAAGCATTTGTTGC+GGG | 0.379620 | 3_2:-67532924 | Msa0419450:CDS |
| GCTCCCCATTGAAAGGGATA+TGG | 0.382055 | 3_2:+67534838 | None:intergenic |
| AAGCAGAGTTTCAATTACTT+TGG | 0.386238 | 3_2:+67536717 | None:intergenic |
| TAGACAACACTTTACATAAG+AGG | 0.388088 | 3_2:-67532884 | Msa0419450:CDS |
| TACATGACAGTTCAATGATA+TGG | 0.389315 | 3_2:-67532961 | Msa0419450:intron |
| CACTGCTCTTGTTCCCCAGA+TGG | 0.393055 | 3_2:-67536853 | Msa0419450:CDS |
| GTAATGCAGTAAGAAATATT+TGG | 0.393915 | 3_2:+67537915 | None:intergenic |
| GAAGATAATGAGGGCAGTCC+AGG | 0.395646 | 3_2:-67536263 | Msa0419450:CDS |
| ATATTTGGTAGTTGATCCTT+TGG | 0.395677 | 3_2:+67537930 | None:intergenic |
| TCTATTCTTAGTCGGGGTAT+TGG | 0.399112 | 3_2:-67534048 | Msa0419450:CDS |
| TTTCGGTGGAGAACCGTTAT+AGG | 0.402300 | 3_2:+67535465 | None:intergenic |
| ACTTTGTTCTAAAACTGTTA+AGG | 0.406816 | 3_2:+67533288 | None:intergenic |
| ATGTTGAAATCCAAGAAGTA+TGG | 0.411526 | 3_2:+67536911 | None:intergenic |
| TCCTTTGGTGGATGTGGTTG+TGG | 0.413545 | 3_2:+67537945 | None:intergenic |
| TACAATGCAGCAATAATTGC+AGG | 0.417508 | 3_2:+67533474 | None:intergenic |
| GATAATGCATTGCTTGATCA+TGG | 0.420292 | 3_2:+67532470 | None:intergenic |
| GACTTATAGATGCTGCTCCT+TGG | 0.435416 | 3_2:-67535411 | Msa0419450:intron |
| ACTGCCAGAGCTTATATTGC+TGG | 0.435476 | 3_2:-67535756 | Msa0419450:CDS |
| TGCCACCTTCTATTCTTAGT+CGG | 0.437110 | 3_2:-67534056 | Msa0419450:CDS |
| GAGTTCCATATCCCTTTCAA+TGG | 0.440675 | 3_2:-67534843 | Msa0419450:CDS |
| TCCACTTTCAGCTGTTCCAT+TGG | 0.444367 | 3_2:-67535932 | Msa0419450:CDS |
| TTGTTGCTTGCAGGCGGAGA+AGG | 0.444678 | 3_2:-67536740 | Msa0419450:intron |
| TACATTTCCACCTCCCATCT+GGG | 0.450062 | 3_2:+67536839 | None:intergenic |
| AAATATTTGTTTAGATTGAA+AGG | 0.450377 | 3_2:+67532768 | None:intergenic |
| TAGTCGGGGTATTGGTTGGC+AGG | 0.453343 | 3_2:-67534040 | Msa0419450:intron |
| GCTGTTCTACTCACTGTTGG+AGG | 0.454047 | 3_2:-67535490 | Msa0419450:CDS |
| CATCTTCCACCTGTGTGGAC+TGG | 0.457011 | 3_2:+67533185 | None:intergenic |
| TCAACTCTTCAAATAGTACT+AGG | 0.457439 | 3_2:-67536223 | Msa0419450:CDS |
| AGTTGATCCTTTGGTGGATG+TGG | 0.457879 | 3_2:+67537939 | None:intergenic |
| CTGTTCTACTCACTGTTGGA+GGG | 0.460539 | 3_2:-67535489 | Msa0419450:CDS |
| TAAGAATAGAAGGTGGCAAT+GGG | 0.462513 | 3_2:+67534061 | None:intergenic |
| GATAAGACCTCAATCGGATC+TGG | 0.463050 | 3_2:+67536565 | None:intergenic |
| TATTCTGATAAGACCTCAAT+CGG | 0.472143 | 3_2:+67536559 | None:intergenic |
| GAAGCTATGGCAGGAGGAGG+AGG | 0.475226 | 3_2:-67537990 | Msa0419450:exon |
| ACTGCTCTTGTTCCCCAGAT+GGG | 0.480801 | 3_2:-67536852 | Msa0419450:CDS |
| ATTGCTGGTATTCGTTTCAC+AGG | 0.486198 | 3_2:-67535741 | Msa0419450:intron |
| AGAGTTGTGCAGATATCTGC+TGG | 0.488720 | 3_2:-67533661 | Msa0419450:CDS |
| ATACCCCGACTAAGAATAGA+AGG | 0.488782 | 3_2:+67534051 | None:intergenic |
| TGTGCCACATGTGTTGCATT+CGG | 0.490071 | 3_2:-67535572 | Msa0419450:CDS |
| TACCAACATAAGCAAAGAAT+AGG | 0.490475 | 3_2:+67533448 | None:intergenic |
| TTCTTAGTCGGGGTATTGGT+TGG | 0.491475 | 3_2:-67534044 | Msa0419450:CDS |
| CAGTCCACACAGGTGGAAGA+TGG | 0.492027 | 3_2:-67533184 | Msa0419450:CDS |
| AGTTCCATATCCCTTTCAAT+GGG | 0.492360 | 3_2:-67534842 | Msa0419450:CDS |
| TAGAGTGGAGACTACTCATA+TGG | 0.492995 | 3_2:+67532634 | None:intergenic |
| GATCTGGTTCATTACTGAAT+CGG | 0.493059 | 3_2:+67536581 | None:intergenic |
| AATAATTGCAGGTGGGATAG+AGG | 0.496305 | 3_2:+67533485 | None:intergenic |
| CGATTACCTGCTGTAATTGG+AGG | 0.500960 | 3_2:-67536649 | Msa0419450:CDS |
| GGATTGTTTGGAACAATTAG+CGG | 0.502285 | 3_2:-67533838 | Msa0419450:CDS |
| CTTGTTCCCCAGATGGGAGG+TGG | 0.502625 | 3_2:-67536846 | Msa0419450:CDS |
| AGAAATTCAAGAAGATAATG+AGG | 0.505728 | 3_2:-67536273 | Msa0419450:CDS |
| TATGCTGTTCTACTCACTGT+TGG | 0.507624 | 3_2:-67535493 | Msa0419450:CDS |
| AGAATAATTGAGATTGTCGT+TGG | 0.509692 | 3_2:+67536610 | None:intergenic |
| GGACAAGTACAAGTCATTCA+AGG | 0.513945 | 3_2:-67532823 | Msa0419450:CDS |
| TCCTGCCGCACTGATCGTGC+TGG | 0.513982 | 3_2:-67535433 | Msa0419450:CDS |
| ATACAGCAATCAATGGTTAT+GGG | 0.516393 | 3_2:-67533208 | Msa0419450:CDS |
| GAGGGATTCATCTATTAGAA+AGG | 0.518790 | 3_2:-67532865 | Msa0419450:CDS |
| TCCAGCACGATCAGTGCGGC+AGG | 0.522111 | 3_2:+67535432 | None:intergenic |
| TCATCATTTGCAGGTGCTGG+AGG | 0.523506 | 3_2:-67533335 | Msa0419450:intron |
| ATCTTTCGTTGCTCTTGTAG+AGG | 0.524901 | 3_2:-67534773 | Msa0419450:intron |
| TATTCACAATTGCAATTGTG+TGG | 0.525941 | 3_2:-67535519 | Msa0419450:CDS |
| TCTTATGTAAAGTGTTGTCT+AGG | 0.530549 | 3_2:+67532886 | None:intergenic |
| ACCAATGGAACAGCTGAAAG+TGG | 0.532981 | 3_2:+67535931 | None:intergenic |
| AGACAACACTTTACATAAGA+GGG | 0.533794 | 3_2:-67532883 | Msa0419450:CDS |
| ATAATGCATTGCTTGATCAT+GGG | 0.534620 | 3_2:+67532471 | None:intergenic |
| ACTGTTGGAGGGGCCTATAA+CGG | 0.535674 | 3_2:-67535478 | Msa0419450:CDS |
| TTAGATTAAGAAGCTATGGC+AGG | 0.535979 | 3_2:-67537999 | Msa0419450:exon |
| ATCTGGGGAACAAGAGCAGT+GGG | 0.536762 | 3_2:+67536855 | None:intergenic |
| AATGAGTATACAGCAATCAA+TGG | 0.538381 | 3_2:-67533215 | Msa0419450:CDS |
| TGTAGGTGCTCCCCATTGAA+AGG | 0.539040 | 3_2:+67534831 | None:intergenic |
| AAATCCAAGAAGTATGGCCT+CGG | 0.545028 | 3_2:+67536917 | None:intergenic |
| AGCATTTGTTGCGGGTGTTG+TGG | 0.545109 | 3_2:-67532916 | Msa0419450:CDS |
| TTTGGTAGTTGATCCTTTGG+TGG | 0.549747 | 3_2:+67537933 | None:intergenic |
| CCAATCAAAAGCATTTGTTG+CGG | 0.549945 | 3_2:-67532925 | Msa0419450:CDS |
| TGAGATTGTCGTTGGCACAT+AGG | 0.550121 | 3_2:+67536618 | None:intergenic |
| AGAGACTAACGCCATGGAGG+AGG | 0.558083 | 3_2:+67537888 | None:intergenic |
| TGCACAATTAATTAAACTGA+TGG | 0.560874 | 3_2:+67532744 | None:intergenic |
| GCCTTTGGCGTAATGTTGCA+AGG | 0.561053 | 3_2:-67536192 | Msa0419450:intron |
| AGTCCACACAGGTGGAAGAT+GGG | 0.561280 | 3_2:-67533183 | Msa0419450:intron |
| TTTCCGTGCAGAGAAAATGC+TGG | 0.562526 | 3_2:-67533715 | Msa0419450:intron |
| GCTTCACCTGCATCAAATGT+AGG | 0.563609 | 3_2:+67534814 | None:intergenic |
| TGTTCTACTCACTGTTGGAG+GGG | 0.564508 | 3_2:-67535488 | Msa0419450:CDS |
| CTAAGAATAGAAGGTGGCAA+TGG | 0.564521 | 3_2:+67534060 | None:intergenic |
| GTAGGTGCTCCCCATTGAAA+GGG | 0.565086 | 3_2:+67534832 | None:intergenic |
| AATACCAGCAATATAAGCTC+TGG | 0.566746 | 3_2:+67535752 | None:intergenic |
| AACGAAAGATGCCATCATCA+TGG | 0.570031 | 3_2:+67534786 | None:intergenic |
| ACAATCTCAATTATTCTCGC+TGG | 0.570834 | 3_2:-67536604 | Msa0419450:CDS |
| AATGCTATAAATTAATAGAG+TGG | 0.574867 | 3_2:+67532619 | None:intergenic |
| TAATGCATTGCTTGATCATG+GGG | 0.578366 | 3_2:+67532472 | None:intergenic |
| TAAGAAGCTATGGCAGGAGG+AGG | 0.579489 | 3_2:-67537993 | Msa0419450:exon |
| GGACAGAGGTAAACATTGGT+GGG | 0.579679 | 3_2:-67532844 | Msa0419450:CDS |
| GTTGCTAAATGTGTAGAGAT+CGG | 0.580682 | 3_2:-67535779 | Msa0419450:CDS |
| GATTAAGAAGCTATGGCAGG+AGG | 0.583299 | 3_2:-67537996 | Msa0419450:exon |
| TAAGACCCTCCAATTACAGC+AGG | 0.584548 | 3_2:+67536643 | None:intergenic |
| GCTCTTGTTCCCCAGATGGG+AGG | 0.592765 | 3_2:-67536849 | Msa0419450:CDS |
| GGAGCACCTACATTTGATGC+AGG | 0.597456 | 3_2:-67534820 | Msa0419450:CDS |
| AGGACAGAGGTAAACATTGG+TGG | 0.598302 | 3_2:-67532845 | Msa0419450:CDS |
| GCATTACTAGTCCTCCTCCA+TGG | 0.599317 | 3_2:-67537899 | Msa0419450:CDS |
| AAACCAACAAGAGAAACCAA+TGG | 0.606011 | 3_2:+67535916 | None:intergenic |
| CTGATATTAGAACTAGACTC+TGG | 0.607375 | 3_2:+67532685 | None:intergenic |
| GAAAGGACAGAGGTAAACAT+TGG | 0.607406 | 3_2:-67532848 | Msa0419450:CDS |
| TAATGAACCAGATCCGATTG+AGG | 0.607552 | 3_2:-67536572 | Msa0419450:intron |
| AAGATAATGAGGGCAGTCCA+GGG | 0.610018 | 3_2:-67536262 | Msa0419450:CDS |
| TTCCCCGAATGCAACACATG+TGG | 0.613775 | 3_2:+67535568 | None:intergenic |
| GAAATTCAAGAAGATAATGA+GGG | 0.618663 | 3_2:-67536272 | Msa0419450:CDS |
| GATTACCTGCTGTAATTGGA+GGG | 0.619577 | 3_2:-67536648 | Msa0419450:CDS |
| CCACCTTCTATTCTTAGTCG+GGG | 0.624455 | 3_2:-67534054 | Msa0419450:CDS |
| ACCTTGCAACATTACGCCAA+AGG | 0.624889 | 3_2:+67536191 | None:intergenic |
| TGAAGCGTTTGCCATGATGA+TGG | 0.627311 | 3_2:-67534797 | Msa0419450:CDS |
| AATGCAGCAATAATTGCAGG+TGG | 0.627398 | 3_2:+67533477 | None:intergenic |
| AACAGAATTTACAGAAACAG+GGG | 0.632722 | 3_2:+67532574 | None:intergenic |
| ACATTTCCACCTCCCATCTG+GGG | 0.633472 | 3_2:+67536840 | None:intergenic |
| ATACCCATCTTCCACCTGTG+TGG | 0.636689 | 3_2:+67533180 | None:intergenic |
| TATGGGCCAGTCCACACAGG+TGG | 0.641196 | 3_2:-67533191 | Msa0419450:CDS |
| CATCTGGGGAACAAGAGCAG+TGG | 0.642369 | 3_2:+67536854 | None:intergenic |
| GAACAGAATTTACAGAAACA+GGG | 0.644183 | 3_2:+67532573 | None:intergenic |
| GACAAGTACAAGTCATTCAA+GGG | 0.644339 | 3_2:-67532822 | Msa0419450:CDS |
| ACCACAACCACATCCACCAA+AGG | 0.644503 | 3_2:-67537946 | Msa0419450:CDS |
| TACAGCAATGAAAGCTCCAG+TGG | 0.645288 | 3_2:+67534104 | None:intergenic |
| TGCCACATGTGTTGCATTCG+GGG | 0.648656 | 3_2:-67535570 | Msa0419450:CDS |
| TGTTGCTGGTATTAACACGT+TGG | 0.653324 | 3_2:-67536692 | Msa0419450:CDS |
| GGTTATGGGCCAGTCCACAC+AGG | 0.660679 | 3_2:-67533194 | Msa0419450:CDS |
| ACAAGAGCGATAAGATAAAG+CGG | 0.662208 | 3_2:-67532719 | Msa0419450:three_prime_UTR |
| CAAGGGTGACACAAGAAGTG+AGG | 0.668674 | 3_2:-67532805 | Msa0419450:CDS |
| GTTTCAGTCTTACACAGACA+CGG | 0.669427 | 3_2:+67533810 | None:intergenic |
| ATGCAGCAATAATTGCAGGT+GGG | 0.674682 | 3_2:+67533478 | None:intergenic |
| AAAAGAGACTAACGCCATGG+AGG | 0.703335 | 3_2:+67537885 | None:intergenic |
| AAGCAACAATAAGAGCACCC+TGG | 0.705283 | 3_2:+67536245 | None:intergenic |
| AAGAATAGAAGGTGGCAATG+GGG | 0.708313 | 3_2:+67534062 | None:intergenic |
| GTATACTCATTGAAGTACTG+TGG | 0.710895 | 3_2:+67533227 | None:intergenic |
| GTTCCATATCCCTTTCAATG+GGG | 0.722732 | 3_2:-67534841 | Msa0419450:CDS |
| CCCCGACTAAGAATAGAAGG+TGG | 0.728889 | 3_2:+67534054 | None:intergenic |
| TCATCTATTAGAAAGGACAG+AGG | 0.737260 | 3_2:-67532858 | Msa0419450:CDS |
| TAAGTCCAGCACGATCAGTG+CGG | 0.740720 | 3_2:+67535428 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTGATTAAAATAAAATAAA+GGG | - | chr3_2:67532859-67532878 | Msa0419450:CDS | 10.0% |
| !! | ATTATATCATAAAACAAATT+TGG | + | chr3_2:67533097-67533116 | None:intergenic | 10.0% |
| !!! | AAAGTATTTTTTTTTTATTC+AGG | - | chr3_2:67533453-67533472 | Msa0419450:CDS | 10.0% |
| !! | AAAATAAAGCAAAAAAAAAA+AGG | + | chr3_2:67534353-67534372 | None:intergenic | 10.0% |
| !! | ATAAATGATAATCATAATAA+TGG | - | chr3_2:67536665-67536684 | Msa0419450:CDS | 10.0% |
| !! | GGTTGATTAAAATAAAATAA+AGG | - | chr3_2:67532858-67532877 | Msa0419450:CDS | 15.0% |
| !!! | TATTTTTTACTTTATGTCAT+TGG | - | chr3_2:67532920-67532939 | Msa0419450:CDS | 15.0% |
| !!! | TTAATTAAGCATTGATATTA+AGG | - | chr3_2:67533020-67533039 | Msa0419450:intron | 15.0% |
| !! | ATTAAAAATTAGTGTATGTT+TGG | + | chr3_2:67533398-67533417 | None:intergenic | 15.0% |
| !! | ATCAAATAACTACAAATTTA+AGG | + | chr3_2:67534301-67534320 | None:intergenic | 15.0% |
| !! | TAAATTTGTAGTTATTTGAT+TGG | - | chr3_2:67534301-67534320 | Msa0419450:intron | 15.0% |
| !!! | TTTACTGAATACAATTTTTT+TGG | + | chr3_2:67534628-67534647 | None:intergenic | 15.0% |
| !!! | TCTTTGTTCTTTTAATATTA+TGG | - | chr3_2:67535015-67535034 | Msa0419450:intron | 15.0% |
| !!! | AAATGAATAAATTTAAAGCT+TGG | - | chr3_2:67535430-67535449 | Msa0419450:CDS | 15.0% |
| !!! | ATTTTTTTTTTGCCTTTATT+GGG | - | chr3_2:67535557-67535576 | Msa0419450:CDS | 15.0% |
| !! | TTAAAAAAGAGAAAATCATA+AGG | + | chr3_2:67535918-67535937 | None:intergenic | 15.0% |
| !!! | TGATTTTCTCTTTTTTAAAT+TGG | - | chr3_2:67535920-67535939 | Msa0419450:CDS | 15.0% |
| !!! | GATTGATTATTTTTATAAGA+GGG | + | chr3_2:67536136-67536155 | None:intergenic | 15.0% |
| !!! | TGATTGATTATTTTTATAAG+AGG | + | chr3_2:67536137-67536156 | None:intergenic | 15.0% |
| !! | ATATATATAATAGTACTGTA+AGG | - | chr3_2:67536309-67536328 | Msa0419450:intron | 15.0% |
| !!! | TATTTTATGTTCTATTCAAT+TGG | - | chr3_2:67536348-67536367 | Msa0419450:intron | 15.0% |
| !! | TTTAACTAAATAACTTGAAA+AGG | + | chr3_2:67536401-67536420 | None:intergenic | 15.0% |
| !!! | AAAAGTTTTACTTGATTTAT+AGG | + | chr3_2:67536733-67536752 | None:intergenic | 15.0% |
| !! | AACCAATTTCATTTATATAA+AGG | + | chr3_2:67536914-67536933 | None:intergenic | 15.0% |
| !! | AAATATTTGTTTAGATTGAA+AGG | + | chr3_2:67537891-67537910 | None:intergenic | 15.0% |
| !! | ATTCTCATTCATTATTTGTA+AGG | - | chr3_2:67532530-67532549 | Msa0419450:three_prime_UTR | 20.0% |
| !! | AACTATTATCTTCTTCATTA+AGG | - | chr3_2:67532561-67532580 | Msa0419450:three_prime_UTR | 20.0% |
| !! | AGCTTAAGTATAATCAATTA+TGG | - | chr3_2:67533282-67533301 | Msa0419450:CDS | 20.0% |
| !! | TTAAGTATAATCAATTATGG+AGG | - | chr3_2:67533285-67533304 | Msa0419450:CDS | 20.0% |
| !!! | TATTCAGGTTGTTTTATTTT+TGG | - | chr3_2:67533468-67533487 | Msa0419450:CDS | 20.0% |
| !!! | ATTCAGGTTGTTTTATTTTT+GGG | - | chr3_2:67533469-67533488 | Msa0419450:CDS | 20.0% |
| !!! | AAGGAATATGTCATTTAAAT+TGG | + | chr3_2:67533583-67533602 | None:intergenic | 20.0% |
| !!! | AACTTTTTTGATGAGAAATT+TGG | - | chr3_2:67533698-67533717 | Msa0419450:CDS | 20.0% |
| !!! | ACTTTTTTGATGAGAAATTT+GGG | - | chr3_2:67533699-67533718 | Msa0419450:CDS | 20.0% |
| !!! | ATTTTTAATACAGCTTAACT+GGG | + | chr3_2:67533889-67533908 | None:intergenic | 20.0% |
| !!! | TATTTTTAATACAGCTTAAC+TGG | + | chr3_2:67533890-67533909 | None:intergenic | 20.0% |
| !!! | AAATTCCTTTTTCAAATCTT+TGG | - | chr3_2:67534646-67534665 | Msa0419450:intron | 20.0% |
| !! | TTGTGAATAAAACAGAAAAA+CGG | + | chr3_2:67535126-67535145 | None:intergenic | 20.0% |
| !! | GATTTGAAAAAAGAGAAAAT+TGG | + | chr3_2:67535484-67535503 | None:intergenic | 20.0% |
| !!! | GATTTTTTTTTTGCCTTTAT+TGG | - | chr3_2:67535556-67535575 | Msa0419450:CDS | 20.0% |
| !!! | TTTTTTTTTTGCCTTTATTG+GGG | - | chr3_2:67535558-67535577 | Msa0419450:CDS | 20.0% |
| !!! | GAATGAGTTTTAAAAATTAC+TGG | - | chr3_2:67536177-67536196 | Msa0419450:intron | 20.0% |
| !!! | AGTTTTAAAAATTACTGGTA+AGG | - | chr3_2:67536182-67536201 | Msa0419450:intron | 20.0% |
| !!! | TTTAATCCTGAAAAAACTTT+TGG | - | chr3_2:67536214-67536233 | Msa0419450:CDS | 20.0% |
| !!! | AAAAAACTTTTGGTAATTGT+TGG | - | chr3_2:67536224-67536243 | Msa0419450:CDS | 20.0% |
| !!! | AAAAACTTTTGGTAATTGTT+GGG | - | chr3_2:67536225-67536244 | Msa0419450:CDS | 20.0% |
| !! | CTCCTTTATATAAATGAAAT+TGG | - | chr3_2:67536909-67536928 | Msa0419450:CDS | 20.0% |
| !!! | ATGATTTTCTTTTCAATTCT+CGG | - | chr3_2:67537022-67537041 | Msa0419450:intron | 20.0% |
| !!! | ATTATATGCTGCTTATTTTA+AGG | + | chr3_2:67537287-67537306 | None:intergenic | 20.0% |
| !!! | TTTAGAACAAAGTTCATATT+AGG | - | chr3_2:67537378-67537397 | Msa0419450:intron | 20.0% |
| !!! | AAATATATTTTTTGCAGAGT+CGG | - | chr3_2:67537511-67537530 | Msa0419450:intron | 20.0% |
| !! | AATGCTATAAATTAATAGAG+TGG | + | chr3_2:67538040-67538059 | None:intergenic | 20.0% |
| ! | TGAAGAAGATAATAGTTACT+AGG | + | chr3_2:67532558-67532577 | None:intergenic | 25.0% |
| !!! | GTTTTTAGATTAAGAAGCTA+TGG | - | chr3_2:67532653-67532672 | Msa0419450:three_prime_UTR | 25.0% |
| ! | GTAATGCAGTAAGAAATATT+TGG | + | chr3_2:67532744-67532763 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTCTCTTAGATTC+TGG | - | chr3_2:67532791-67532810 | Msa0419450:CDS | 25.0% |
| ! | ATCTCTCATTATTCTTAATC+TGG | - | chr3_2:67532837-67532856 | Msa0419450:CDS | 25.0% |
| ! | TGCAAATAGAATCTCAAATT+AGG | + | chr3_2:67532947-67532966 | None:intergenic | 25.0% |
| ! | ATCTAGATCTAGAAAAAACT+GGG | + | chr3_2:67533051-67533070 | None:intergenic | 25.0% |
| ! | AATCTAGATCTAGAAAAAAC+TGG | + | chr3_2:67533052-67533071 | None:intergenic | 25.0% |
| !!! | AGTTTTTTCTAGATCTAGAT+TGG | - | chr3_2:67533051-67533070 | Msa0419450:intron | 25.0% |
| ! | ATATAATCTAAGTGTGTGTT+TGG | - | chr3_2:67533110-67533129 | Msa0419450:intron | 25.0% |
| !! | AAAATTGATTCTCACATGTT+TGG | + | chr3_2:67533336-67533355 | None:intergenic | 25.0% |
| !!! | TTCAGGTTGTTTTATTTTTG+GGG | - | chr3_2:67533470-67533489 | Msa0419450:CDS | 25.0% |
| ! | ATGTTTGAACAATGTTGTAA+AGG | - | chr3_2:67533532-67533551 | Msa0419450:intron | 25.0% |
| !!! | GTAAAGGAATTTTGAGTAAT+TGG | - | chr3_2:67533548-67533567 | Msa0419450:intron | 25.0% |
| ! | GCACAAACTACAAAAAATAA+AGG | + | chr3_2:67533602-67533621 | None:intergenic | 25.0% |
| ! | AACAAAGTGAATCAATCTTA+AGG | + | chr3_2:67533659-67533678 | None:intergenic | 25.0% |
| !!! | CTTTTTTGATGAGAAATTTG+GGG | - | chr3_2:67533700-67533719 | Msa0419450:CDS | 25.0% |
| ! | TAACTATACTAAATGATGTG+TGG | - | chr3_2:67534122-67534141 | Msa0419450:intron | 25.0% |
| !! | TTGCAAATCTTAGTCTATTT+TGG | + | chr3_2:67534194-67534213 | None:intergenic | 25.0% |
| ! | TTGGAGACACAATAAAAAAA+TGG | + | chr3_2:67534229-67534248 | None:intergenic | 25.0% |
| !!! | ACAAATTTAAGGTCTTATTG+TGG | + | chr3_2:67534290-67534309 | None:intergenic | 25.0% |
| ! | TATCTTCTTGAATTTCTGAA+TGG | + | chr3_2:67534380-67534399 | None:intergenic | 25.0% |
| ! | AGAAATTCAAGAAGATAATG+AGG | - | chr3_2:67534383-67534402 | Msa0419450:intron | 25.0% |
| ! | GAAATTCAAGAAGATAATGA+GGG | - | chr3_2:67534384-67534403 | Msa0419450:intron | 25.0% |
| !!! | AATTTTTTTGGCGAATATCA+TGG | + | chr3_2:67534616-67534635 | None:intergenic | 25.0% |
| ! | CTAATCCAAAGATTTGAAAA+AGG | + | chr3_2:67534654-67534673 | None:intergenic | 25.0% |
| ! | AAATCAAACTTACATCAGAT+TGG | + | chr3_2:67534686-67534705 | None:intergenic | 25.0% |
| ! | TAGAAACATTAAAAGACACT+AGG | + | chr3_2:67534965-67534984 | None:intergenic | 25.0% |
| ! | TCATTAAATTTAACCCTTGA+TGG | - | chr3_2:67535282-67535301 | Msa0419450:intron | 25.0% |
| ! | TTGACATGAAATAACAAGAA+TGG | + | chr3_2:67535506-67535525 | None:intergenic | 25.0% |
| !!! | TTATTCTGTCTTTGTTTTTC+TGG | - | chr3_2:67536006-67536025 | Msa0419450:intron | 25.0% |
| !!! | CAATTACCAAAAGTTTTTTC+AGG | + | chr3_2:67536223-67536242 | None:intergenic | 25.0% |
| ! | ATGTTGGCAATTAGTAAAAA+GGG | + | chr3_2:67537114-67537133 | None:intergenic | 25.0% |
| ! | AATGTTGGCAATTAGTAAAA+AGG | + | chr3_2:67537115-67537134 | None:intergenic | 25.0% |
| ! | TGCAAATGATGAATGAAAAT+GGG | + | chr3_2:67537313-67537332 | None:intergenic | 25.0% |
| !!! | ACTTTGTTCTAAAACTGTTA+AGG | + | chr3_2:67537371-67537390 | None:intergenic | 25.0% |
| ! | TGCACAATTAATTAAACTGA+TGG | + | chr3_2:67537915-67537934 | None:intergenic | 25.0% |
| ! | ATATTTGGTAGTTGATCCTT+TGG | + | chr3_2:67532729-67532748 | None:intergenic | 30.0% |
| GTACAAGAACATTATCTGTT+TGG | - | chr3_2:67532881-67532900 | Msa0419450:CDS | 30.0% | |
| AAGTTAAAGTGACCTATGTT+TGG | - | chr3_2:67533184-67533203 | Msa0419450:CDS | 30.0% | |
| ACATGAATGTATCCAAACAT+AGG | + | chr3_2:67533199-67533218 | None:intergenic | 30.0% | |
| TGTATGTTTGGTCTCATTTA+TGG | + | chr3_2:67533386-67533405 | None:intergenic | 30.0% | |
| GTGTTATGTAACATCAGTAA+GGG | - | chr3_2:67533492-67533511 | Msa0419450:CDS | 30.0% | |
| GTGAATCAATCTTAAGGAAA+AGG | + | chr3_2:67533653-67533672 | None:intergenic | 30.0% | |
| ATGTTGAAATCCAAGAAGTA+TGG | + | chr3_2:67533748-67533767 | None:intergenic | 30.0% | |
| ! | CAACATTTTCTTGTAATGCT+TGG | - | chr3_2:67533762-67533781 | Msa0419450:intron | 30.0% |
| !! | AGGACTAGCAAATTTTGATA+CGG | - | chr3_2:67533840-67533859 | Msa0419450:CDS | 30.0% |
| AAGCAGAGTTTCAATTACTT+TGG | + | chr3_2:67533942-67533961 | None:intergenic | 30.0% | |
| AGAATAATTGAGATTGTCGT+TGG | + | chr3_2:67534049-67534068 | None:intergenic | 30.0% | |
| TATTCTGATAAGACCTCAAT+CGG | + | chr3_2:67534100-67534119 | None:intergenic | 30.0% | |
| TCAACTCTTCAAATAGTACT+AGG | - | chr3_2:67534433-67534452 | Msa0419450:intron | 30.0% | |
| TGCAAATTTGCACAAATAGT+CGG | + | chr3_2:67534548-67534567 | None:intergenic | 30.0% | |
| TTACATCAGATTGGAACATT+TGG | + | chr3_2:67534677-67534696 | None:intergenic | 30.0% | |
| !!! | GTAAGTTTGATTTTTTCTGC+AGG | - | chr3_2:67534693-67534712 | Msa0419450:intron | 30.0% |
| ATCCTTCAACTACATGTTTA+CGG | - | chr3_2:67534794-67534813 | Msa0419450:CDS | 30.0% | |
| ATCCATGAACTAAAATCACA+AGG | + | chr3_2:67534995-67535014 | None:intergenic | 30.0% | |
| TATTCACAATTGCAATTGTG+TGG | - | chr3_2:67535137-67535156 | Msa0419450:intron | 30.0% | |
| AATAGACAAAATGCCATCAA+GGG | + | chr3_2:67535298-67535317 | None:intergenic | 30.0% | |
| CAAGATCAAATATACAAGCA+TGG | + | chr3_2:67535348-67535367 | None:intergenic | 30.0% | |
| !! | TTTTAATTGGGTCCTTATCA+TGG | + | chr3_2:67535400-67535419 | None:intergenic | 30.0% |
| TCTATTATGTTTGTGCTCTA+AGG | + | chr3_2:67535660-67535679 | None:intergenic | 30.0% | |
| TTTCTCAAGAAAGATTCAGT+TGG | - | chr3_2:67535682-67535701 | Msa0419450:intron | 30.0% | |
| TCAAGAAAACCAATATCTCA+AGG | + | chr3_2:67535710-67535729 | None:intergenic | 30.0% | |
| !!! | TGAGATATTGGTTTTCTTGA+TGG | - | chr3_2:67535710-67535729 | Msa0419450:intron | 30.0% |
| !!! | CTCTTGTATTTTGAGTTTGT+AGG | - | chr3_2:67535786-67535805 | Msa0419450:intron | 30.0% |
| TTATGTTCTATTCAATTGGC+AGG | - | chr3_2:67536352-67536371 | Msa0419450:intron | 30.0% | |
| TATGTTCTATTCAATTGGCA+GGG | - | chr3_2:67536353-67536372 | Msa0419450:intron | 30.0% | |
| AAAACTTAGCCTACACATAA+TGG | - | chr3_2:67536418-67536437 | Msa0419450:intron | 30.0% | |
| TTCTACTTGATCTCGTAATT+TGG | - | chr3_2:67536483-67536502 | Msa0419450:intron | 30.0% | |
| TGGTTACATAGTTGCTAATT+TGG | - | chr3_2:67536503-67536522 | Msa0419450:intron | 30.0% | |
| ! | CATCTGATTTATGCTTGTTA+GGG | - | chr3_2:67536776-67536795 | Msa0419450:intron | 30.0% |
| ! | ATCTGATTTATGCTTGTTAG+GGG | - | chr3_2:67536777-67536796 | Msa0419450:intron | 30.0% |
| ATTCTTCTATCTGGATTGTT+TGG | - | chr3_2:67536806-67536825 | Msa0419450:intron | 30.0% | |
| TAAAAAGGGAGAAATGTACT+CGG | + | chr3_2:67537100-67537119 | None:intergenic | 30.0% | |
| TATCACTGTGTAGGAAAATT+TGG | - | chr3_2:67537137-67537156 | Msa0419450:intron | 30.0% | |
| TACCAACATAAGCAAAGAAT+AGG | + | chr3_2:67537211-67537230 | None:intergenic | 30.0% | |
| CTGCAAATGATGAATGAAAA+TGG | + | chr3_2:67537314-67537333 | None:intergenic | 30.0% | |
| ! | CATTTTCATTCATCATTTGC+AGG | - | chr3_2:67537312-67537331 | Msa0419450:intron | 30.0% |
| ATTAGGCTTCTCTATATTCT+TGG | - | chr3_2:67537395-67537414 | Msa0419450:intron | 30.0% | |
| TTAGGCTTCTCTATATTCTT+GGG | - | chr3_2:67537396-67537415 | Msa0419450:intron | 30.0% | |
| AATGAGTATACAGCAATCAA+TGG | - | chr3_2:67537441-67537460 | Msa0419450:intron | 30.0% | |
| CAATGCATAAGAATTGAACT+AGG | - | chr3_2:67537629-67537648 | Msa0419450:intron | 30.0% | |
| ! | TTGAACTAGGATTTGTTCTT+TGG | - | chr3_2:67537642-67537661 | Msa0419450:intron | 30.0% |
| TACATGACAGTTCAATGATA+TGG | - | chr3_2:67537695-67537714 | Msa0419450:intron | 30.0% | |
| !! | CAAATGCTTTTGATTGGAAT+GGG | + | chr3_2:67537728-67537747 | None:intergenic | 30.0% |
| !! | ACAAATGCTTTTGATTGGAA+TGG | + | chr3_2:67537729-67537748 | None:intergenic | 30.0% |
| !! | TCTTATGTAAAGTGTTGTCT+AGG | + | chr3_2:67537773-67537792 | None:intergenic | 30.0% |
| TAGACAACACTTTACATAAG+AGG | - | chr3_2:67537772-67537791 | Msa0419450:intron | 30.0% | |
| AGACAACACTTTACATAAGA+GGG | - | chr3_2:67537773-67537792 | Msa0419450:intron | 30.0% | |
| AACAGAATTTACAGAAACAG+GGG | + | chr3_2:67538085-67538104 | None:intergenic | 30.0% | |
| GAACAGAATTTACAGAAACA+GGG | + | chr3_2:67538086-67538105 | None:intergenic | 30.0% | |
| TGAACAGAATTTACAGAAAC+AGG | + | chr3_2:67538087-67538106 | None:intergenic | 30.0% | |
| GTAAATTCTGTTCAAGAAAG+TGG | - | chr3_2:67538093-67538112 | Msa0419450:intron | 30.0% | |
| ACGTGACAAAAATCAAATGA+AGG | + | chr3_2:67538149-67538168 | None:intergenic | 30.0% | |
| ATAATGCATTGCTTGATCAT+GGG | + | chr3_2:67538188-67538207 | None:intergenic | 30.0% | |
| TTAGATTAAGAAGCTATGGC+AGG | - | chr3_2:67532657-67532676 | Msa0419450:three_prime_UTR | 35.0% | |
| AAAAAAAGAGACTAACGCCA+TGG | + | chr3_2:67532777-67532796 | None:intergenic | 35.0% | |
| ATCTAAGTGTGTGTTTGGTT+CGG | - | chr3_2:67533115-67533134 | Msa0419450:intron | 35.0% | |
| ! | GGGATCAAAATTGATTCTAG+AGG | + | chr3_2:67533362-67533381 | None:intergenic | 35.0% |
| TGTTTGGTCTCATTTATGGA+GGG | + | chr3_2:67533382-67533401 | None:intergenic | 35.0% | |
| ATGTTTGGTCTCATTTATGG+AGG | + | chr3_2:67533383-67533402 | None:intergenic | 35.0% | |
| ! | GGTGTTATGTAACATCAGTA+AGG | - | chr3_2:67533491-67533510 | Msa0419450:CDS | 35.0% |
| TCAATCTTAAGGAAAAGGAG+AGG | + | chr3_2:67533648-67533667 | None:intergenic | 35.0% | |
| !! | AGCAAATTTTGATACGGAAG+TGG | - | chr3_2:67533846-67533865 | Msa0419450:CDS | 35.0% |
| ! | ATATTCCATTTGTTGCTTGC+AGG | - | chr3_2:67533907-67533926 | Msa0419450:intron | 35.0% |
| ACAATCTCAATTATTCTCGC+TGG | - | chr3_2:67534052-67534071 | Msa0419450:CDS | 35.0% | |
| ! | GATCTGGTTCATTACTGAAT+CGG | + | chr3_2:67534078-67534097 | None:intergenic | 35.0% |
| !!! | AGTGTGTGATTGTTAGCTTT+TGG | + | chr3_2:67534248-67534267 | None:intergenic | 35.0% |
| GTTATTTGATTGGAACTGCT+AGG | - | chr3_2:67534311-67534330 | Msa0419450:intron | 35.0% | |
| ! | CAAATAGTACTAGGCTTTAG+TGG | - | chr3_2:67534442-67534461 | Msa0419450:intron | 35.0% |
| AATTTGCACAAATAGTCGGA+AGG | + | chr3_2:67534544-67534563 | None:intergenic | 35.0% | |
| AAACCAACAAGAGAAACCAA+TGG | + | chr3_2:67534743-67534762 | None:intergenic | 35.0% | |
| !!! | TTGGTTTCTCTTGTTGGTTT+TGG | - | chr3_2:67534743-67534762 | Msa0419450:intron | 35.0% |
| !!! | TGGTTTCTCTTGTTGGTTTT+GGG | - | chr3_2:67534744-67534763 | Msa0419450:intron | 35.0% |
| ! | TTGTACGAATTAGGTTTTCC+TGG | - | chr3_2:67534767-67534786 | Msa0419450:intron | 35.0% |
| ! | TGTACGAATTAGGTTTTCCT+GGG | - | chr3_2:67534768-67534787 | Msa0419450:intron | 35.0% |
| AACCGTAAACATGTAGTTGA+AGG | + | chr3_2:67534799-67534818 | None:intergenic | 35.0% | |
| GTTGCTAAATGTGTAGAGAT+CGG | - | chr3_2:67534877-67534896 | Msa0419450:intron | 35.0% | |
| AATACCAGCAATATAAGCTC+TGG | + | chr3_2:67534907-67534926 | None:intergenic | 35.0% | |
| !!! | TGCCTTGTGATTTTAGTTCA+TGG | - | chr3_2:67534990-67535009 | Msa0419450:intron | 35.0% |
| TGAAATCACACAACTAACCA+AGG | + | chr3_2:67535265-67535284 | None:intergenic | 35.0% | |
| CAATAGACAAAATGCCATCA+AGG | + | chr3_2:67535299-67535318 | None:intergenic | 35.0% | |
| TCTTGCGATTTAAAAGCTTC+TGG | - | chr3_2:67535363-67535382 | Msa0419450:intron | 35.0% | |
| ! | TTGATGGCAATCTACTTTCT+AGG | - | chr3_2:67535726-67535745 | Msa0419450:intron | 35.0% |
| AGTTCCATATCCCTTTCAAT+GGG | - | chr3_2:67535814-67535833 | Msa0419450:intron | 35.0% | |
| !!! | TGTCTTTGTTTTTCTGGAAC+TGG | - | chr3_2:67536012-67536031 | Msa0419450:intron | 35.0% |
| !!! | GTCTTTGTTTTTCTGGAACT+GGG | - | chr3_2:67536013-67536032 | Msa0419450:intron | 35.0% |
| ! | TTTTATCAGTGCATTGAAGC+TGG | - | chr3_2:67536036-67536055 | Msa0419450:intron | 35.0% |
| TAGTTTCATTGAAGTTCAGC+TGG | + | chr3_2:67536112-67536131 | None:intergenic | 35.0% | |
| !! | AACTGTTTCTATCTCTCTTG+AGG | + | chr3_2:67536278-67536297 | None:intergenic | 35.0% |
| ATGTTCTATTCAATTGGCAG+GGG | - | chr3_2:67536354-67536373 | Msa0419450:intron | 35.0% | |
| ATAGTGACACCATTATGTGT+AGG | + | chr3_2:67536430-67536449 | None:intergenic | 35.0% | |
| GAGCTTTCATTGCTGTATAT+AGG | - | chr3_2:67536558-67536577 | Msa0419450:intron | 35.0% | |
| TAAGAATAGAAGGTGGCAAT+GGG | + | chr3_2:67536598-67536617 | None:intergenic | 35.0% | |
| AAGCATAAATCAGATGCATG+AGG | + | chr3_2:67536772-67536791 | None:intergenic | 35.0% | |
| GCATCTGATTTATGCTTGTT+AGG | - | chr3_2:67536775-67536794 | Msa0419450:intron | 35.0% | |
| ! | TCTGATTTATGCTTGTTAGG+GGG | - | chr3_2:67536778-67536797 | Msa0419450:intron | 35.0% |
| ! | GGATTGTTTGGAACAATTAG+CGG | - | chr3_2:67536818-67536837 | Msa0419450:intron | 35.0% |
| CTACACAGTGATAGAAATGT+TGG | + | chr3_2:67537130-67537149 | None:intergenic | 35.0% | |
| CAACATTTCTATCACTGTGT+AGG | - | chr3_2:67537128-67537147 | Msa0419450:intron | 35.0% | |
| TACAATGCAGCAATAATTGC+AGG | + | chr3_2:67537185-67537204 | None:intergenic | 35.0% | |
| TGCCTATTCTTTGCTTATGT+TGG | - | chr3_2:67537206-67537225 | Msa0419450:intron | 35.0% | |
| !!! | GCTGCTTATTTTAAGGATCA+TGG | + | chr3_2:67537280-67537299 | None:intergenic | 35.0% |
| !! | GTATACTCATTGAAGTACTG+TGG | + | chr3_2:67537432-67537451 | None:intergenic | 35.0% |
| !! | CCAATCAAAAGCATTTGTTG+CGG | - | chr3_2:67537731-67537750 | Msa0419450:intron | 35.0% |
| !! | CAATCAAAAGCATTTGTTGC+GGG | - | chr3_2:67537732-67537751 | Msa0419450:intron | 35.0% |
| GAGGGATTCATCTATTAGAA+AGG | - | chr3_2:67537791-67537810 | Msa0419450:intron | 35.0% | |
| TCATCTATTAGAAAGGACAG+AGG | - | chr3_2:67537798-67537817 | Msa0419450:intron | 35.0% | |
| GACAAGTACAAGTCATTCAA+GGG | - | chr3_2:67537834-67537853 | Msa0419450:intron | 35.0% | |
| ACAAGAGCGATAAGATAAAG+CGG | - | chr3_2:67537937-67537956 | Msa0419450:CDS | 35.0% | |
| CTGATATTAGAACTAGACTC+TGG | + | chr3_2:67537974-67537993 | None:intergenic | 35.0% | |
| TAATGCATTGCTTGATCATG+GGG | + | chr3_2:67538187-67538206 | None:intergenic | 35.0% | |
| GATAATGCATTGCTTGATCA+TGG | + | chr3_2:67538189-67538208 | None:intergenic | 35.0% | |
| ! | TGTGGTTCATCTGATTTTGC+TGG | + | chr3_2:67532696-67532715 | None:intergenic | 40.0% |
| ! | TTTGGTAGTTGATCCTTTGG+TGG | + | chr3_2:67532726-67532745 | None:intergenic | 40.0% |
| ! | AAATCCAAGAAGTATGGCCT+CGG | + | chr3_2:67533742-67533761 | None:intergenic | 40.0% |
| !!! | GAAACTCTGCTTTTTGTTGC+TGG | - | chr3_2:67533950-67533969 | Msa0419450:intron | 40.0% |
| TGTTGCTGGTATTAACACGT+TGG | - | chr3_2:67533964-67533983 | Msa0419450:intron | 40.0% | |
| TCACGATTACCTGCTGTAAT+TGG | - | chr3_2:67534004-67534023 | Msa0419450:intron | 40.0% | |
| GATTACCTGCTGTAATTGGA+GGG | - | chr3_2:67534008-67534027 | Msa0419450:intron | 40.0% | |
| TAATGAACCAGATCCGATTG+AGG | - | chr3_2:67534084-67534103 | Msa0419450:CDS | 40.0% | |
| GGTCTCACATTCTTACTAAG+TGG | - | chr3_2:67534489-67534508 | Msa0419450:intron | 40.0% | |
| !! | GTTCCATTGGTTTCTCTTGT+TGG | - | chr3_2:67534737-67534756 | Msa0419450:intron | 40.0% |
| !!! | GGTTTTGGGTTGTACGAATT+AGG | - | chr3_2:67534758-67534777 | Msa0419450:intron | 40.0% |
| ! | GTACGAATTAGGTTTTCCTG+GGG | - | chr3_2:67534769-67534788 | Msa0419450:intron | 40.0% |
| TCAACATCGATGCTTGTGTT+GGG | - | chr3_2:67534849-67534868 | Msa0419450:CDS | 40.0% | |
| ATTGCTGGTATTCGTTTCAC+AGG | - | chr3_2:67534915-67534934 | Msa0419450:intron | 40.0% | |
| TATGCTGTTCTACTCACTGT+TGG | - | chr3_2:67535163-67535182 | Msa0419450:intron | 40.0% | |
| GCGATTTAAAAGCTTCTGGT+TGG | - | chr3_2:67535367-67535386 | Msa0419450:intron | 40.0% | |
| GAGCAAAATCTCCCCAATAA+AGG | + | chr3_2:67535572-67535591 | None:intergenic | 40.0% | |
| CAGTTGGATCCTTGAGATAT+TGG | - | chr3_2:67535698-67535717 | Msa0419450:intron | 40.0% | |
| GAGTTCCATATCCCTTTCAA+TGG | - | chr3_2:67535813-67535832 | Msa0419450:intron | 40.0% | |
| GTTCCATATCCCTTTCAATG+GGG | - | chr3_2:67535815-67535834 | Msa0419450:intron | 40.0% | |
| AACGAAAGATGCCATCATCA+TGG | + | chr3_2:67535873-67535892 | None:intergenic | 40.0% | |
| ATCTTTCGTTGCTCTTGTAG+AGG | - | chr3_2:67535883-67535902 | Msa0419450:intron | 40.0% | |
| TGTTGGGCGTTTGTCATAAA+TGG | - | chr3_2:67536241-67536260 | Msa0419450:CDS | 40.0% | |
| ! | TCTTTTTGTACACAGTCCAC+TGG | - | chr3_2:67536536-67536555 | Msa0419450:intron | 40.0% |
| AAGAATAGAAGGTGGCAATG+GGG | + | chr3_2:67536597-67536616 | None:intergenic | 40.0% | |
| CTAAGAATAGAAGGTGGCAA+TGG | + | chr3_2:67536599-67536618 | None:intergenic | 40.0% | |
| TGCCACCTTCTATTCTTAGT+CGG | - | chr3_2:67536600-67536619 | Msa0419450:CDS | 40.0% | |
| ATACCCCGACTAAGAATAGA+AGG | + | chr3_2:67536608-67536627 | None:intergenic | 40.0% | |
| TCTATTCTTAGTCGGGGTAT+TGG | - | chr3_2:67536608-67536627 | Msa0419450:CDS | 40.0% | |
| ! | ATTTATGCTTGTTAGGGGGT+CGG | - | chr3_2:67536782-67536801 | Msa0419450:intron | 40.0% |
| GTTTCAGTCTTACACAGACA+CGG | + | chr3_2:67536849-67536868 | None:intergenic | 40.0% | |
| !!! | CAGAGAAAATGCTGGTCTTT+TGG | - | chr3_2:67536949-67536968 | Msa0419450:intron | 40.0% |
| AATAATTGCAGGTGGGATAG+AGG | + | chr3_2:67537174-67537193 | None:intergenic | 40.0% | |
| ATGCAGCAATAATTGCAGGT+GGG | + | chr3_2:67537181-67537200 | None:intergenic | 40.0% | |
| AATGCAGCAATAATTGCAGG+TGG | + | chr3_2:67537182-67537201 | None:intergenic | 40.0% | |
| ! | CCGCAACAAATGCTTTTGAT+TGG | + | chr3_2:67537734-67537753 | None:intergenic | 40.0% |
| GAAAGGACAGAGGTAAACAT+TGG | - | chr3_2:67537808-67537827 | Msa0419450:intron | 40.0% | |
| GGACAAGTACAAGTCATTCA+AGG | - | chr3_2:67537833-67537852 | Msa0419450:intron | 40.0% | |
| TAGAGTGGAGACTACTCATA+TGG | + | chr3_2:67538025-67538044 | None:intergenic | 40.0% | |
| GATTAAGAAGCTATGGCAGG+AGG | - | chr3_2:67532660-67532679 | Msa0419450:three_prime_UTR | 45.0% | |
| ! | AGTTGATCCTTTGGTGGATG+TGG | + | chr3_2:67532720-67532739 | None:intergenic | 45.0% |
| AAAAGAGACTAACGCCATGG+AGG | + | chr3_2:67532774-67532793 | None:intergenic | 45.0% | |
| CTTAAGGAAAAGGAGAGGCT+GGG | + | chr3_2:67533643-67533662 | None:intergenic | 45.0% | |
| TCTTAAGGAAAAGGAGAGGC+TGG | + | chr3_2:67533644-67533663 | None:intergenic | 45.0% | |
| !!! | GACATTTTTTGATGCAGCCG+AGG | - | chr3_2:67533722-67533741 | Msa0419450:intron | 45.0% |
| TACATTTCCACCTCCCATCT+GGG | + | chr3_2:67533820-67533839 | None:intergenic | 45.0% | |
| TTACATTTCCACCTCCCATC+TGG | + | chr3_2:67533821-67533840 | None:intergenic | 45.0% | |
| AGATGGGAGGTGGAAATGTA+AGG | - | chr3_2:67533820-67533839 | Msa0419450:intron | 45.0% | |
| ! | TTCCATTTGTTGCTTGCAGG+CGG | - | chr3_2:67533910-67533929 | Msa0419450:intron | 45.0% |
| ACGTTGGTGCAAACACTCTT+TGG | - | chr3_2:67533980-67533999 | Msa0419450:intron | 45.0% | |
| CGATTACCTGCTGTAATTGG+AGG | - | chr3_2:67534007-67534026 | Msa0419450:intron | 45.0% | |
| TAAGACCCTCCAATTACAGC+AGG | + | chr3_2:67534016-67534035 | None:intergenic | 45.0% | |
| TGAGATTGTCGTTGGCACAT+AGG | + | chr3_2:67534041-67534060 | None:intergenic | 45.0% | |
| GATAAGACCTCAATCGGATC+TGG | + | chr3_2:67534094-67534113 | None:intergenic | 45.0% | |
| AAGATAATGAGGGCAGTCCA+GGG | - | chr3_2:67534394-67534413 | Msa0419450:intron | 45.0% | |
| !! | AAGCAACAATAAGAGCACCC+TGG | + | chr3_2:67534414-67534433 | None:intergenic | 45.0% |
| ! | TACTAGGCTTTAGTGGCCTT+TGG | - | chr3_2:67534449-67534468 | Msa0419450:intron | 45.0% |
| ACCTTGCAACATTACGCCAA+AGG | + | chr3_2:67534468-67534487 | None:intergenic | 45.0% | |
| TTGGCGTAATGTTGCAAGGT+TGG | - | chr3_2:67534468-67534487 | Msa0419450:intron | 45.0% | |
| TCCACTTTCAGCTGTTCCAT+TGG | - | chr3_2:67534724-67534743 | Msa0419450:intron | 45.0% | |
| ACCAATGGAACAGCTGAAAG+TGG | + | chr3_2:67534728-67534747 | None:intergenic | 45.0% | |
| TGTAGTTGAAGGATTACCCC+AGG | + | chr3_2:67534788-67534807 | None:intergenic | 45.0% | |
| CTCAACATCGATGCTTGTGT+TGG | - | chr3_2:67534848-67534867 | Msa0419450:CDS | 45.0% | |
| ACTGCCAGAGCTTATATTGC+TGG | - | chr3_2:67534900-67534919 | Msa0419450:intron | 45.0% | |
| TGTGCCACATGTGTTGCATT+CGG | - | chr3_2:67535084-67535103 | Msa0419450:intron | 45.0% | |
| CTGTTCTACTCACTGTTGGA+GGG | - | chr3_2:67535167-67535186 | Msa0419450:intron | 45.0% | |
| TGTTCTACTCACTGTTGGAG+GGG | - | chr3_2:67535168-67535187 | Msa0419450:intron | 45.0% | |
| TTTCGGTGGAGAACCGTTAT+AGG | + | chr3_2:67535194-67535213 | None:intergenic | 45.0% | |
| GACTTATAGATGCTGCTCCT+TGG | - | chr3_2:67535245-67535264 | Msa0419450:intron | 45.0% | |
| ATTGGGTCCTTATCATGGCA+GGG | + | chr3_2:67535395-67535414 | None:intergenic | 45.0% | |
| AATTGGGTCCTTATCATGGC+AGG | + | chr3_2:67535396-67535415 | None:intergenic | 45.0% | |
| ! | GGAGATTTTGCTCACTGAAG+TGG | - | chr3_2:67535579-67535598 | Msa0419450:intron | 45.0% |
| GCTTCACCTGCATCAAATGT+AGG | + | chr3_2:67535845-67535864 | None:intergenic | 45.0% | |
| ! | TGAAGCGTTTGCCATGATGA+TGG | - | chr3_2:67535859-67535878 | Msa0419450:intron | 45.0% |
| TTCTATTCAATTGGCAGGGG+CGG | - | chr3_2:67536357-67536376 | Msa0419450:intron | 45.0% | |
| TACAGCAATGAAAGCTCCAG+TGG | + | chr3_2:67536555-67536574 | None:intergenic | 45.0% | |
| GCCACCTTCTATTCTTAGTC+GGG | - | chr3_2:67536601-67536620 | Msa0419450:CDS | 45.0% | |
| CCACCTTCTATTCTTAGTCG+GGG | - | chr3_2:67536602-67536621 | Msa0419450:CDS | 45.0% | |
| !! | TTCTTAGTCGGGGTATTGGT+TGG | - | chr3_2:67536612-67536631 | Msa0419450:CDS | 45.0% |
| TTTCCGTGCAGAGAAAATGC+TGG | - | chr3_2:67536941-67536960 | Msa0419450:intron | 45.0% | |
| ! | AGACCAGCATTTTCTCTGCA+CGG | + | chr3_2:67536947-67536966 | None:intergenic | 45.0% |
| AGAGTTGTGCAGATATCTGC+TGG | - | chr3_2:67536995-67537014 | Msa0419450:intron | 45.0% | |
| CATTCATCATTTGCAGGTGC+TGG | - | chr3_2:67537318-67537337 | Msa0419450:intron | 45.0% | |
| AGGACAGAGGTAAACATTGG+TGG | - | chr3_2:67537811-67537830 | Msa0419450:intron | 45.0% | |
| GGACAGAGGTAAACATTGGT+GGG | - | chr3_2:67537812-67537831 | Msa0419450:intron | 45.0% | |
| !!! | TTTTAAATAAGTTTTTAATT+GGG | + | chr3_2:67535412-67535431 | None:intergenic | 5.0% |
| !!! | TTTTTAAATAAGTTTTTAAT+TGG | + | chr3_2:67535413-67535432 | None:intergenic | 5.0% |
| TAAGAAGCTATGGCAGGAGG+AGG | - | chr3_2:67532663-67532682 | Msa0419450:three_prime_UTR | 50.0% | |
| ACCACAACCACATCCACCAA+AGG | - | chr3_2:67532710-67532729 | Msa0419450:three_prime_UTR | 50.0% | |
| ! | TCCTTTGGTGGATGTGGTTG+TGG | + | chr3_2:67532714-67532733 | None:intergenic | 50.0% |
| GCATTACTAGTCCTCCTCCA+TGG | - | chr3_2:67532757-67532776 | Msa0419450:CDS | 50.0% | |
| ATCTGGGGAACAAGAGCAGT+GGG | + | chr3_2:67533804-67533823 | None:intergenic | 50.0% | |
| ACTGCTCTTGTTCCCCAGAT+GGG | - | chr3_2:67533804-67533823 | Msa0419450:intron | 50.0% | |
| ACATTTCCACCTCCCATCTG+GGG | + | chr3_2:67533819-67533838 | None:intergenic | 50.0% | |
| GAAGATAATGAGGGCAGTCC+AGG | - | chr3_2:67534393-67534412 | Msa0419450:intron | 50.0% | |
| GCCTTTGGCGTAATGTTGCA+AGG | - | chr3_2:67534464-67534483 | Msa0419450:intron | 50.0% | |
| TCGATGCTTGTGTTGGGTGT+AGG | - | chr3_2:67534855-67534874 | Msa0419450:intron | 50.0% | |
| GTGCCACATGTGTTGCATTC+GGG | - | chr3_2:67535085-67535104 | Msa0419450:intron | 50.0% | |
| TGCCACATGTGTTGCATTCG+GGG | - | chr3_2:67535086-67535105 | Msa0419450:intron | 50.0% | |
| TTCCCCGAATGCAACACATG+TGG | + | chr3_2:67535091-67535110 | None:intergenic | 50.0% | |
| GCTGTTCTACTCACTGTTGG+AGG | - | chr3_2:67535166-67535185 | Msa0419450:intron | 50.0% | |
| ACTGTTGGAGGGGCCTATAA+CGG | - | chr3_2:67535178-67535197 | Msa0419450:intron | 50.0% | |
| ! | CAGGATGTCTGTGTTTTCGG+TGG | + | chr3_2:67535208-67535227 | None:intergenic | 50.0% |
| ! | CGGCAGGATGTCTGTGTTTT+CGG | + | chr3_2:67535211-67535230 | None:intergenic | 50.0% |
| TAAGTCCAGCACGATCAGTG+CGG | + | chr3_2:67535231-67535250 | None:intergenic | 50.0% | |
| TTGGGTCCTTATCATGGCAG+GGG | + | chr3_2:67535394-67535413 | None:intergenic | 50.0% | |
| GCTCCCCATTGAAAGGGATA+TGG | + | chr3_2:67535821-67535840 | None:intergenic | 50.0% | |
| GTAGGTGCTCCCCATTGAAA+GGG | + | chr3_2:67535827-67535846 | None:intergenic | 50.0% | |
| TGTAGGTGCTCCCCATTGAA+AGG | + | chr3_2:67535828-67535847 | None:intergenic | 50.0% | |
| ! | GGAGCACCTACATTTGATGC+AGG | - | chr3_2:67535836-67535855 | Msa0419450:intron | 50.0% |
| TCTATTCAATTGGCAGGGGC+GGG | - | chr3_2:67536358-67536377 | Msa0419450:intron | 50.0% | |
| CCCCGACTAAGAATAGAAGG+TGG | + | chr3_2:67536605-67536624 | None:intergenic | 50.0% | |
| !!! | CTTTTGGCTCTGACACGTGT+TGG | - | chr3_2:67536965-67536984 | Msa0419450:intron | 50.0% |
| GGGAGAAATGTACTCGGATG+TGG | + | chr3_2:67537094-67537113 | None:intergenic | 50.0% | |
| !! | TCATCATTTGCAGGTGCTGG+AGG | - | chr3_2:67537321-67537340 | Msa0419450:intron | 50.0% |
| AGTCCACACAGGTGGAAGAT+GGG | - | chr3_2:67537473-67537492 | Msa0419450:intron | 50.0% | |
| ATACCCATCTTCCACCTGTG+TGG | + | chr3_2:67537479-67537498 | None:intergenic | 50.0% | |
| ACACAGGTGGAAGATGGGTA+TGG | - | chr3_2:67537478-67537497 | Msa0419450:intron | 50.0% | |
| ! | AGCATTTGTTGCGGGTGTTG+TGG | - | chr3_2:67537740-67537759 | Msa0419450:intron | 50.0% |
| CAAGGGTGACACAAGAAGTG+AGG | - | chr3_2:67537851-67537870 | Msa0419450:intron | 50.0% | |
| AGAGACTAACGCCATGGAGG+AGG | + | chr3_2:67532771-67532790 | None:intergenic | 55.0% | |
| CATCTGGGGAACAAGAGCAG+TGG | + | chr3_2:67533805-67533824 | None:intergenic | 55.0% | |
| CACTGCTCTTGTTCCCCAGA+TGG | - | chr3_2:67533803-67533822 | Msa0419450:intron | 55.0% | |
| CTCCGCCTGCAAGCAACAAA+TGG | + | chr3_2:67533915-67533934 | None:intergenic | 55.0% | |
| ! | TTGTTGCTTGCAGGCGGAGA+AGG | - | chr3_2:67533916-67533935 | Msa0419450:intron | 55.0% |
| GTTGGTCCCCTGCCATGATA+AGG | - | chr3_2:67535385-67535404 | Msa0419450:intron | 55.0% | |
| CTATTCAATTGGCAGGGGCG+GGG | - | chr3_2:67536359-67536378 | Msa0419450:intron | 55.0% | |
| TATTCAATTGGCAGGGGCGG+GGG | - | chr3_2:67536360-67536379 | Msa0419450:intron | 55.0% | |
| !! | TAGTCGGGGTATTGGTTGGC+AGG | - | chr3_2:67536616-67536635 | Msa0419450:CDS | 55.0% |
| GGGGTCGGCATTCTTCTATC+TGG | - | chr3_2:67536797-67536816 | Msa0419450:intron | 55.0% | |
| CATCTTCCACCTGTGTGGAC+TGG | + | chr3_2:67537474-67537493 | None:intergenic | 55.0% | |
| CAGTCCACACAGGTGGAAGA+TGG | - | chr3_2:67537472-67537491 | Msa0419450:intron | 55.0% | |
| GAAGCTATGGCAGGAGGAGG+AGG | - | chr3_2:67532666-67532685 | Msa0419450:three_prime_UTR | 60.0% | |
| GCAGCCGAGGCCATACTTCT+TGG | - | chr3_2:67533735-67533754 | Msa0419450:intron | 60.0% | |
| GCTCTTGTTCCCCAGATGGG+AGG | - | chr3_2:67533807-67533826 | Msa0419450:intron | 60.0% | |
| CTTGTTCCCCAGATGGGAGG+TGG | - | chr3_2:67533810-67533829 | Msa0419450:intron | 60.0% | |
| ! | TCCTGCCGCACTGATCGTGC+TGG | - | chr3_2:67535223-67535242 | Msa0419450:intron | 65.0% |
| TCCAGCACGATCAGTGCGGC+AGG | + | chr3_2:67535227-67535246 | None:intergenic | 65.0% | |
| AATTGGCAGGGGCGGGGGAT+TGG | - | chr3_2:67536365-67536384 | Msa0419450:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 67532466 | 67538212 | 67532466 | ID=Msa0419450;Name=Msa0419450 |
| chr3_2 | mRNA | 67532466 | 67538212 | 67532466 | ID=Msa0419450-mRNA-1;Parent=Msa0419450;Name=Msa0419450-mRNA-1;_AED=0.13;_eAED=0.13;_QI=101|1|1|1|0.92|0.86|15|289|532 |
| chr3_2 | exon | 67532466 | 67532973 | 67532466 | ID=Msa0419450-mRNA-1:exon:15723;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67533184 | 67533344 | 67533184 | ID=Msa0419450-mRNA-1:exon:15722;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67533451 | 67533528 | 67533451 | ID=Msa0419450-mRNA-1:exon:15721;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67533635 | 67533726 | 67533635 | ID=Msa0419450-mRNA-1:exon:15720;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67533823 | 67533881 | 67533823 | ID=Msa0419450-mRNA-1:exon:15719;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67534041 | 67534127 | 67534041 | ID=Msa0419450-mRNA-1:exon:15718;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67534774 | 67534870 | 67534774 | ID=Msa0419450-mRNA-1:exon:15717;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67535412 | 67535596 | 67535412 | ID=Msa0419450-mRNA-1:exon:15716;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67535742 | 67535801 | 67535742 | ID=Msa0419450-mRNA-1:exon:15715;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67535888 | 67535963 | 67535888 | ID=Msa0419450-mRNA-1:exon:15714;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67536193 | 67536293 | 67536193 | ID=Msa0419450-mRNA-1:exon:15713;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67536573 | 67536749 | 67536573 | ID=Msa0419450-mRNA-1:exon:15712;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67536842 | 67536939 | 67536842 | ID=Msa0419450-mRNA-1:exon:15711;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67537898 | 67538026 | 67537898 | ID=Msa0419450-mRNA-1:exon:15710;Parent=Msa0419450-mRNA-1 |
| chr3_2 | exon | 67538132 | 67538212 | 67538132 | ID=Msa0419450-mRNA-1:exon:15709;Parent=Msa0419450-mRNA-1 |
| chr3_2 | five_prime_UTR | 67538132 | 67538212 | 67538132 | ID=Msa0419450-mRNA-1:five_prime_utr;Parent=Msa0419450-mRNA-1 |
| chr3_2 | five_prime_UTR | 67538007 | 67538026 | 67538007 | ID=Msa0419450-mRNA-1:five_prime_utr;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67537898 | 67538006 | 67537898 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67536842 | 67536939 | 67536842 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67536573 | 67536749 | 67536573 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67536193 | 67536293 | 67536193 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67535888 | 67535963 | 67535888 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67535742 | 67535801 | 67535742 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67535412 | 67535596 | 67535412 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67534774 | 67534870 | 67534774 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67534041 | 67534127 | 67534041 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67533823 | 67533881 | 67533823 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67533635 | 67533726 | 67533635 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67533451 | 67533528 | 67533451 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67533184 | 67533344 | 67533184 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | CDS | 67532755 | 67532973 | 67532755 | ID=Msa0419450-mRNA-1:cds;Parent=Msa0419450-mRNA-1 |
| chr3_2 | three_prime_UTR | 67532466 | 67532754 | 67532466 | ID=Msa0419450-mRNA-1:three_prime_utr;Parent=Msa0419450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
