Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414650 | XP_013460462.1 | 74.832 | 596 | 123 | 6 | 558 | 1148 | 2 | 575 | 0.0 | 893 |
| Msa0414650 | XP_013460462.1 | 92.820 | 571 | 35 | 3 | 1 | 566 | 1 | 570 | 0.0 | 1090 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414650 | sp|Q4F883|SG101_ARATH | 35.911 | 582 | 273 | 22 | 10 | 555 | 9 | 526 | 7.47e-89 | 300 |
| Msa0414650 | sp|Q4F883|SG101_ARATH | 33.779 | 598 | 302 | 20 | 566 | 1141 | 9 | 534 | 9.19e-82 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414650 | A0A072V8I6 | 74.832 | 596 | 123 | 6 | 558 | 1148 | 2 | 575 | 0.0 | 893 |
| Msa0414650 | A0A072V8I6 | 92.820 | 571 | 35 | 3 | 1 | 566 | 1 | 570 | 0.0 | 1090 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0366680 | Msa0414650 | 0.874261 | 7.755308e-68 | -8.615850e-47 |
| Msa0377800 | Msa0414650 | 0.804880 | 1.746871e-49 | -8.615850e-47 |
| Msa0414650 | Msa0426600 | 0.843577 | 1.286588e-58 | -8.615850e-47 |
| Msa0414650 | Msa0459560 | 0.869197 | 3.709480e-66 | -8.615850e-47 |
| Msa0414650 | Msa0472910 | 0.807755 | 4.328481e-50 | -8.615850e-47 |
| Msa0414650 | Msa0506300 | 0.804618 | 1.981360e-49 | -8.615850e-47 |
| Msa0414650 | Msa0517570 | 0.811155 | 8.066304e-51 | -8.615850e-47 |
| Msa0414650 | Msa0903990 | 0.815567 | 8.654087e-52 | -8.615850e-47 |
| Msa0414650 | Msa0936530 | 0.803464 | 3.443535e-49 | -8.615850e-47 |
| Msa0414650 | Msa0973520 | 0.802191 | 6.306772e-49 | -8.615850e-47 |
| Msa0414650 | Msa1145760 | 0.817316 | 3.513290e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414650 | MtrunA17_Chr3g0107671 | 92.820 | 571 | 35 | 3 | 1 | 566 | 1 | 570 | 0.0 | 1090 |
| Msa0414650 | MtrunA17_Chr3g0107671 | 74.832 | 596 | 123 | 6 | 558 | 1148 | 2 | 575 | 0.0 | 893 |
| Msa0414650 | MtrunA17_Chr6g0451531 | 62.857 | 595 | 190 | 11 | 561 | 1148 | 7 | 577 | 0.0 | 710 |
| Msa0414650 | MtrunA17_Chr6g0451531 | 63.937 | 574 | 187 | 9 | 5 | 566 | 7 | 572 | 0.0 | 707 |
| Msa0414650 | MtrunA17_Chr6g0451541 | 61.176 | 595 | 201 | 8 | 561 | 1148 | 7 | 578 | 0.0 | 703 |
| Msa0414650 | MtrunA17_Chr6g0451541 | 61.780 | 573 | 202 | 7 | 5 | 566 | 7 | 573 | 0.0 | 691 |
| Msa0414650 | MtrunA17_Chr6g0451561 | 60.927 | 604 | 193 | 11 | 558 | 1148 | 2 | 575 | 0.0 | 689 |
| Msa0414650 | MtrunA17_Chr6g0451561 | 60.171 | 585 | 199 | 11 | 1 | 566 | 1 | 570 | 0.0 | 664 |
| Msa0414650 | MtrunA17_Chr6g0451511 | 57.821 | 569 | 219 | 11 | 1 | 556 | 1 | 561 | 0.0 | 602 |
| Msa0414650 | MtrunA17_Chr6g0451511 | 53.601 | 597 | 242 | 10 | 561 | 1147 | 5 | 576 | 0.0 | 580 |
| Msa0414650 | MtrunA17_Chr3g0107661 | 82.629 | 213 | 21 | 1 | 558 | 770 | 2 | 198 | 6.99e-112 | 348 |
| Msa0414650 | MtrunA17_Chr3g0107661 | 75.758 | 198 | 42 | 3 | 1 | 192 | 1 | 198 | 9.51e-92 | 295 |
| Msa0414650 | MtrunA17_Chr3g0107651 | 85.612 | 139 | 17 | 1 | 852 | 990 | 1 | 136 | 9.58e-76 | 246 |
| Msa0414650 | MtrunA17_Chr3g0107651 | 71.014 | 138 | 38 | 1 | 273 | 410 | 1 | 136 | 2.68e-60 | 202 |
| Msa0414650 | MtrunA17_Chr8g0384621 | 26.305 | 479 | 285 | 16 | 704 | 1116 | 132 | 608 | 2.74e-34 | 140 |
| Msa0414650 | MtrunA17_Chr8g0384621 | 26.543 | 486 | 282 | 18 | 126 | 542 | 132 | 611 | 7.97e-31 | 130 |
| Msa0414650 | MtrunA17_Chr3g0118251 | 25.691 | 362 | 200 | 15 | 205 | 535 | 276 | 599 | 1.70e-21 | 100 |
| Msa0414650 | MtrunA17_Chr3g0118251 | 25.978 | 358 | 203 | 13 | 783 | 1112 | 276 | 599 | 1.26e-20 | 97.8 |
| Msa0414650 | MtrunA17_Chr3g0118541 | 24.022 | 358 | 208 | 13 | 205 | 535 | 287 | 607 | 2.54e-16 | 84.0 |
| Msa0414650 | MtrunA17_Chr3g0118541 | 26.836 | 354 | 202 | 16 | 783 | 1112 | 287 | 607 | 1.49e-15 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0414650 | AT5G14930.2 | 35.911 | 582 | 273 | 22 | 10 | 555 | 9 | 526 | 7.59e-90 | 300 |
| Msa0414650 | AT5G14930.2 | 33.779 | 598 | 302 | 20 | 566 | 1141 | 9 | 534 | 9.34e-83 | 280 |
| Msa0414650 | AT3G52430.1 | 27.211 | 441 | 265 | 15 | 126 | 542 | 112 | 520 | 1.06e-34 | 141 |
| Msa0414650 | AT3G52430.1 | 27.358 | 424 | 269 | 15 | 704 | 1111 | 112 | 512 | 2.51e-34 | 140 |
| Msa0414650 | AT5G14930.3 | 35.683 | 227 | 119 | 7 | 10 | 219 | 9 | 225 | 1.67e-29 | 118 |
| Msa0414650 | AT5G14930.3 | 33.471 | 242 | 127 | 7 | 566 | 798 | 9 | 225 | 4.07e-23 | 100 |
| Msa0414650 | AT3G48080.1 | 23.770 | 366 | 219 | 13 | 205 | 536 | 265 | 604 | 1.11e-12 | 72.8 |
Find 200 sgRNAs with CRISPR-Local
Find 539 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTTGAGGAGTATGTTTA+TGG | 0.174319 | 3_2:-60324821 | Msa0414650:CDS |
| ACCACCTTCACTATAGTATT+TGG | 0.184967 | 3_2:+60325075 | None:intergenic |
| CTGTCATTCAACTTCTTTGA+TGG | 0.196958 | 3_2:+60325355 | None:intergenic |
| TACGGTTTGTAGAAACTTAT+TGG | 0.197065 | 3_2:-60319724 | Msa0414650:intron |
| CTGTATCACGTAGTTCTATT+TGG | 0.204589 | 3_2:-60321361 | Msa0414650:CDS |
| CTTCACGTCATTCAATTTCT+TGG | 0.211999 | 3_2:+60320564 | None:intergenic |
| GAACTTGAATCTGTTGATTA+TGG | 0.222882 | 3_2:-60321149 | Msa0414650:CDS |
| CCATATCACGTAGTTCTATT+TGG | 0.224477 | 3_2:-60326119 | Msa0414650:CDS |
| TGACTATAGATTCTTGCTTT+TGG | 0.226808 | 3_2:-60324925 | Msa0414650:CDS |
| GAACGAGTATAAAGTCATTA+AGG | 0.264468 | 3_2:-60319954 | Msa0414650:CDS |
| TGACTACAGATTCTTGCTTT+TGG | 0.265156 | 3_2:-60320147 | Msa0414650:CDS |
| ATGTTAATCAATTCCATAAA+AGG | 0.272611 | 3_2:-60325228 | Msa0414650:CDS |
| TTCCAGTGTTCAAGCTGATT+TGG | 0.274780 | 3_2:-60327741 | Msa0414650:CDS |
| CACCATTTACTGGGAGAAAA+TGG | 0.274895 | 3_2:-60320416 | Msa0414650:CDS |
| ACAGTTGGAGGAGTGGTTAT+TGG | 0.276000 | 3_2:-60325014 | Msa0414650:CDS |
| GAAATCGAATCTGTTGATTA+TGG | 0.278305 | 3_2:-60325910 | Msa0414650:CDS |
| ACCAGTAATTACATGCCTTT+TGG | 0.278707 | 3_2:-60321272 | Msa0414650:CDS |
| AACCATCTTCTCCCAATAAA+AGG | 0.279832 | 3_2:+60325201 | None:intergenic |
| TTTCGTACCCGTTGGTTATA+TGG | 0.289900 | 3_2:-60320352 | Msa0414650:CDS |
| TCCAAAAGGCATGTAATTAC+TGG | 0.303907 | 3_2:+60321271 | None:intergenic |
| GGCTGAAAACATGACTAATA+AGG | 0.304536 | 3_2:-60321072 | Msa0414650:CDS |
| TTCCAATATTCTCTCTTAAC+AGG | 0.307529 | 3_2:-60323014 | Msa0414650:CDS |
| ACGATGGTATTGATCTTTCT+TGG | 0.307765 | 3_2:-60323179 | Msa0414650:CDS |
| ACCAGTACCTACATGCCTTT+TGG | 0.310304 | 3_2:-60326030 | Msa0414650:CDS |
| ATATCAGTTGCTAGTGAATC+TGG | 0.321829 | 3_2:+60325814 | None:intergenic |
| AAAGAAATTATTTGAATTTG+AGG | 0.327326 | 3_2:-60320056 | Msa0414650:CDS |
| AAGGAAATTGTTTGAATTTG+AGG | 0.330524 | 3_2:-60324834 | Msa0414650:CDS |
| CAGACTCCGCTGATTGTTAC+TGG | 0.330953 | 3_2:-60326273 | Msa0414650:CDS |
| TGTATCACGTAGTTCTATTT+GGG | 0.331601 | 3_2:-60321360 | Msa0414650:CDS |
| CGCCCGCTCTGCATCACCTT+TGG | 0.334408 | 3_2:-60326177 | Msa0414650:CDS |
| AAAATTTCAAAGATAGAATC+TGG | 0.334535 | 3_2:+60325967 | None:intergenic |
| TGGTATTAGTTTGCAGTTGC+GGG | 0.335752 | 3_2:-60321036 | Msa0414650:CDS |
| CCAAATAGAACTACGTGATA+TGG | 0.336582 | 3_2:+60326119 | None:intergenic |
| GGTTTCTTCTGCTGAACTTA+AGG | 0.337315 | 3_2:-60327720 | Msa0414650:CDS |
| TGGAAACTTGATAAAGAAAC+TGG | 0.339523 | 3_2:-60327797 | Msa0414650:CDS |
| CGTCCACTTTGCATCACATT+TGG | 0.342266 | 3_2:-60321419 | Msa0414650:CDS |
| TGCGTTAACATTGTTACATA+AGG | 0.344686 | 3_2:+60321560 | None:intergenic |
| TTACATAGAGAATACACTTC+AGG | 0.354520 | 3_2:+60319847 | None:intergenic |
| TATATGGTGGGACTACTTAC+AGG | 0.360221 | 3_2:-60320336 | Msa0414650:CDS |
| CCAACTTGAATGGTACAAAA+AGG | 0.362345 | 3_2:-60320530 | Msa0414650:CDS |
| TATACGCAGGGACTACTTAC+AGG | 0.366046 | 3_2:-60325123 | Msa0414650:CDS |
| AGTTTCTTCAACTGAACTTA+AGG | 0.383974 | 3_2:-60323079 | Msa0414650:CDS |
| TTGGTATGTTTAACATGAAT+AGG | 0.385149 | 3_2:-60319487 | Msa0414650:three_prime_UTR |
| AAGATGGTGTTGGACTTTCT+TGG | 0.386462 | 3_2:-60327817 | Msa0414650:CDS |
| GATCAAATGATATCTTCTTC+TGG | 0.386790 | 3_2:+60320590 | None:intergenic |
| AGTGTCCCCTGAGATATTTC+TGG | 0.390259 | 3_2:-60324780 | Msa0414650:CDS |
| TTCTCAAATCTTAATTGCAT+TGG | 0.397601 | 3_2:+60319385 | None:intergenic |
| CTATTACAAAATGTTGGTTC+AGG | 0.398260 | 3_2:-60321449 | Msa0414650:CDS |
| GCGTTAACATTGTTACATAA+GGG | 0.401068 | 3_2:+60321561 | None:intergenic |
| ACCTTTGGTTCACTGCTTGT+TGG | 0.404200 | 3_2:-60326162 | Msa0414650:CDS |
| CTAGTATCCTTTGTAAATCC+TGG | 0.408991 | 3_2:-60323239 | Msa0414650:CDS |
| ATTGTTACATAAGGGATTGC+AGG | 0.410033 | 3_2:+60321569 | None:intergenic |
| CCACCATCCTTTGCAAATCA+TGG | 0.413072 | 3_2:-60327865 | Msa0414650:CDS |
| GTCTGAACATTTCAAACAGT+TGG | 0.414634 | 3_2:-60325029 | Msa0414650:CDS |
| GTTCACCCCTTGTTGGTGAT+AGG | 0.416099 | 3_2:-60321397 | Msa0414650:CDS |
| AAATCTAAGAATGAACAGAT+AGG | 0.416654 | 3_2:-60325295 | Msa0414650:CDS |
| ATTAACTTGGCAGCAGCAAC+AGG | 0.420351 | 3_2:-60320674 | Msa0414650:intron |
| AGTTTGCAGTTGCGGGAACT+AGG | 0.421150 | 3_2:-60321029 | Msa0414650:CDS |
| GTATTGTTTGTATCACTTGT+TGG | 0.422070 | 3_2:+60320196 | None:intergenic |
| TGAGAACACAGATTCTATCT+TGG | 0.423952 | 3_2:-60321213 | Msa0414650:CDS |
| CTGATAATGAAGATATCGTT+TGG | 0.425931 | 3_2:-60323203 | Msa0414650:CDS |
| AAAATCACCAGGAGCTTGAT+AGG | 0.441346 | 3_2:-60327610 | Msa0414650:CDS |
| AAGATTGAGCAATATGCTAT+AGG | 0.443681 | 3_2:-60319884 | Msa0414650:CDS |
| GTAAATGATGATTTGCTTCA+AGG | 0.445663 | 3_2:-60319510 | Msa0414650:three_prime_UTR |
| AATTTGAGGAGTATGTTTAT+GGG | 0.446356 | 3_2:-60324820 | Msa0414650:CDS |
| TCATCTGATAATTATGAAGA+TGG | 0.446459 | 3_2:-60327833 | Msa0414650:CDS |
| AAAGATTCTTCCTGCAGAAA+AGG | 0.447014 | 3_2:-60325390 | Msa0414650:CDS |
| ATCAGATGAGATAGCAGTCC+AGG | 0.447957 | 3_2:+60323221 | None:intergenic |
| ACGTCATTCAATTTCTTGGA+TGG | 0.451028 | 3_2:+60320568 | None:intergenic |
| CTTCGTGCCAGAAATATCTC+AGG | 0.453015 | 3_2:+60324773 | None:intergenic |
| TATGATTCTGTCATATTGTA+CGG | 0.453928 | 3_2:-60319742 | Msa0414650:three_prime_UTR |
| AACTGATATCAGTTTGCAGT+TGG | 0.454655 | 3_2:-60325800 | Msa0414650:CDS |
| GTTCACTGCTTGTTGGTGAC+AGG | 0.455112 | 3_2:-60326155 | Msa0414650:CDS |
| AACGAGTATAAAGTCATTAA+GGG | 0.457834 | 3_2:-60319953 | Msa0414650:CDS |
| TATCTTGAAGCAGAATGCTT+AGG | 0.458040 | 3_2:-60321107 | Msa0414650:CDS |
| TAGTATTTGGCAATGGATAG+TGG | 0.459872 | 3_2:+60325088 | None:intergenic |
| ACTGATATCAGTTTGCAGTT+GGG | 0.461531 | 3_2:-60325799 | Msa0414650:CDS |
| CTGATATCAGTTTGCAGTTG+GGG | 0.462079 | 3_2:-60325798 | Msa0414650:CDS |
| ACAGTTGGAGGAATGGTTGA+TGG | 0.465873 | 3_2:-60320227 | Msa0414650:CDS |
| ATATCACTATTACATAGTAT+TGG | 0.466453 | 3_2:-60326213 | Msa0414650:CDS |
| CATGACTAATAAGGATTCAC+TGG | 0.466833 | 3_2:-60321063 | Msa0414650:CDS |
| AATAAGGATTCACTGGCAAC+TGG | 0.467829 | 3_2:-60321056 | Msa0414650:CDS |
| ATTGTTACTGGACATGGTCT+CGG | 0.471304 | 3_2:-60326261 | Msa0414650:CDS |
| GAAGGTATTGCAAAGAAAGA+AGG | 0.478694 | 3_2:+60328177 | None:intergenic |
| AACTAAATCAGCTTGAACAT+TGG | 0.480618 | 3_2:+60323098 | None:intergenic |
| AATCAACGGAGTCGATAGAT+TGG | 0.480720 | 3_2:+60321523 | None:intergenic |
| AAGACTATGTTAATAACAAA+AGG | 0.482489 | 3_2:-60325051 | Msa0414650:CDS |
| AACCAAAGGTGATGCAGAGC+GGG | 0.486416 | 3_2:+60326175 | None:intergenic |
| ACATTTGGTTCACCCCTTGT+TGG | 0.489434 | 3_2:-60321404 | Msa0414650:CDS |
| CTTGGAAATTCTCGTGGCGT+TGG | 0.490276 | 3_2:-60321195 | Msa0414650:CDS |
| GTCCTGTTAAGAGAGAATAT+TGG | 0.490954 | 3_2:+60323012 | None:intergenic |
| AGAAGCCTTAAAAGCTAGAA+TGG | 0.491774 | 3_2:+60327763 | None:intergenic |
| GAATGACAGGAAGCTAGATA+TGG | 0.493020 | 3_2:-60325341 | Msa0414650:CDS |
| TACATAGAGAATACACTTCA+GGG | 0.493529 | 3_2:+60319848 | None:intergenic |
| CATCAAAGAAGTTGAATGAC+AGG | 0.495480 | 3_2:-60325354 | Msa0414650:CDS |
| TATTAGAAGAAGACGTGAAG+TGG | 0.497993 | 3_2:+60328211 | None:intergenic |
| GAATGACGTGAAGGTACATA+TGG | 0.498676 | 3_2:-60320554 | Msa0414650:CDS |
| AACCAAATCAGCTTGAACAC+TGG | 0.498868 | 3_2:+60327739 | None:intergenic |
| CGTACCCGTTGGTTATATGG+TGG | 0.499140 | 3_2:-60320349 | Msa0414650:CDS |
| TAGATATGGCCCAACTTGAA+TGG | 0.502446 | 3_2:-60325327 | Msa0414650:CDS |
| GTCGAAACACTTCAAACAGT+TGG | 0.503766 | 3_2:-60320242 | Msa0414650:CDS |
| AGGGTTGACGCCACATATGC+AGG | 0.504580 | 3_2:-60321009 | Msa0414650:intron |
| TATTCTCCTACCTGCATATG+TGG | 0.506256 | 3_2:+60325760 | None:intergenic |
| ACTTCAAACAGTTGGAGGAA+TGG | 0.506869 | 3_2:-60320234 | Msa0414650:CDS |
| TTGATTAACATCATAGTCAT+CGG | 0.511196 | 3_2:+60325240 | None:intergenic |
| ACTTGAGAAGTTGAAAATTG+AGG | 0.513086 | 3_2:-60322956 | Msa0414650:intron |
| GCAACTAAGAATCTACAAGT+AGG | 0.514677 | 3_2:-60320508 | Msa0414650:CDS |
| TACATATGGCCCAACTTGAA+TGG | 0.515555 | 3_2:-60320540 | Msa0414650:CDS |
| CGCAAAGCAGCTATATTCGT+TGG | 0.515903 | 3_2:-60319979 | Msa0414650:CDS |
| CTGGTATTAGTTTGCAGTTG+CGG | 0.516244 | 3_2:-60321037 | Msa0414650:CDS |
| CCGCTGATTGTTACTGGACA+TGG | 0.520674 | 3_2:-60326267 | Msa0414650:CDS |
| TCCAAAAGGCATGTAGGTAC+TGG | 0.521347 | 3_2:+60326029 | None:intergenic |
| ATTGCTGAATACTACAGAAA+AGG | 0.522600 | 3_2:-60320292 | Msa0414650:CDS |
| GATAATTATGAAGATGGTGT+TGG | 0.522657 | 3_2:-60327827 | Msa0414650:CDS |
| ACTCTTTCGCGAAAATCACC+AGG | 0.525563 | 3_2:-60327621 | Msa0414650:CDS |
| ATGATAATAAATGTTCCAAA+AGG | 0.525693 | 3_2:+60321257 | None:intergenic |
| ATGATGATTTGCTTCAAGGT+TGG | 0.525855 | 3_2:-60319506 | Msa0414650:three_prime_UTR |
| AGCTTGAACATTGGAAGAAG+TGG | 0.525874 | 3_2:+60323107 | None:intergenic |
| GATGAAATTGATGAGAATGA+AGG | 0.528663 | 3_2:+60328159 | None:intergenic |
| TGATTAACATCATAGTCATC+GGG | 0.529019 | 3_2:+60325241 | None:intergenic |
| TATTCACTTACCTGCATATG+TGG | 0.529136 | 3_2:+60320999 | None:intergenic |
| GTTTGCAGTTGCGGGAACTA+GGG | 0.530111 | 3_2:-60321028 | Msa0414650:CDS |
| AGATTGTGTCATAGTGAACT+TGG | 0.530927 | 3_2:+60328069 | None:intergenic |
| ATATCACTATTACAAAATGT+TGG | 0.532409 | 3_2:-60321455 | Msa0414650:CDS |
| GTACCCGTTGGTTATATGGT+GGG | 0.534161 | 3_2:-60320348 | Msa0414650:CDS |
| CACAGGATGAATGTTCCAAA+AGG | 0.534955 | 3_2:+60326015 | None:intergenic |
| TTCTTCTGCTGAACTTAAGG+AGG | 0.536537 | 3_2:-60327717 | Msa0414650:CDS |
| AGTCCCTGCGTATAACCAAC+GGG | 0.541499 | 3_2:+60325132 | None:intergenic |
| AAGTTTGACACCACATATGC+AGG | 0.546591 | 3_2:-60325770 | Msa0414650:intron |
| AATCTAAGAATGAACAGATA+GGG | 0.546965 | 3_2:-60325294 | Msa0414650:CDS |
| AGTCCCACCATATAACCAAC+GGG | 0.547594 | 3_2:+60320345 | None:intergenic |
| CGATCTGTAATGAAGAGCCT+TGG | 0.549347 | 3_2:+60321296 | None:intergenic |
| CGATCTGTAATGAAGAGCCT+TGG | 0.549347 | 3_2:+60326054 | None:intergenic |
| TTCACTATAGTATTTGGCAA+TGG | 0.553980 | 3_2:+60325081 | None:intergenic |
| TGAACATTTCAAACAGTTGG+AGG | 0.555656 | 3_2:-60325026 | Msa0414650:CDS |
| AAGACTATGTTAATAATGAA+AGG | 0.557899 | 3_2:-60320264 | Msa0414650:CDS |
| CAACTAAGAATCTACAAGTA+GGG | 0.560073 | 3_2:-60320507 | Msa0414650:CDS |
| GCCAAATACTATAGTGAAGG+TGG | 0.562312 | 3_2:-60325076 | Msa0414650:CDS |
| AAGAGAAAGACGAGGCACTA+AGG | 0.562949 | 3_2:-60324853 | Msa0414650:CDS |
| CTATCCATGTTGCTTTACCA+TGG | 0.563422 | 3_2:+60325869 | None:intergenic |
| CACGAAGCAGCTACATTCGT+TGG | 0.564876 | 3_2:-60324757 | Msa0414650:CDS |
| ATTTCAAACAGTTGGAGGAG+TGG | 0.565495 | 3_2:-60325021 | Msa0414650:CDS |
| TGTGTCATAGTGAACTTGGT+TGG | 0.568826 | 3_2:+60328073 | None:intergenic |
| GTATGTTTATGGGTTGCTCA+AGG | 0.569328 | 3_2:-60324810 | Msa0414650:CDS |
| AGGGACTACTTACAGGAGAA+TGG | 0.570000 | 3_2:-60325116 | Msa0414650:CDS |
| TTCTATCTTGGAAATTCTCG+TGG | 0.570429 | 3_2:-60321201 | Msa0414650:CDS |
| CACTTGATGCTCCGAGACCA+TGG | 0.570659 | 3_2:+60321492 | None:intergenic |
| CCATGATTTGCAAAGGATGG+TGG | 0.572173 | 3_2:+60327865 | None:intergenic |
| GTAATGAAGAGCCTTGGAAG+TGG | 0.574422 | 3_2:+60321302 | None:intergenic |
| GTAATGAAGAGCCTTGGAAG+TGG | 0.574422 | 3_2:+60326060 | None:intergenic |
| CAGTTGGAGGAATGGTTGAT+GGG | 0.574475 | 3_2:-60320226 | Msa0414650:CDS |
| AATCAGCGGAGTCTGTGGAT+TGG | 0.574922 | 3_2:+60326281 | None:intergenic |
| GTATTGCAAAGAAAGAAGGA+AGG | 0.575425 | 3_2:+60328181 | None:intergenic |
| ACCAACAAGCAGTGAACCAA+AGG | 0.577198 | 3_2:+60326161 | None:intergenic |
| TTGTTACATAAGGGATTGCA+GGG | 0.580874 | 3_2:+60321570 | None:intergenic |
| ACAGAATCATAATTGTTCAG+AGG | 0.581701 | 3_2:+60319754 | None:intergenic |
| TGGGACTACTTACAGGAGAA+TGG | 0.583573 | 3_2:-60320329 | Msa0414650:CDS |
| GTATGTTTATAAGTTGCTCA+AGG | 0.585546 | 3_2:-60320032 | Msa0414650:CDS |
| ATCTCCATGGTAAAGCAACA+TGG | 0.588280 | 3_2:-60325873 | Msa0414650:CDS |
| AGTCCATGATTTGCAAAGGA+TGG | 0.589663 | 3_2:+60327862 | None:intergenic |
| GAATGTTCCAAAAGGCATGT+AGG | 0.591885 | 3_2:+60326023 | None:intergenic |
| CACACAAAGACCCACTTCCA+AGG | 0.594406 | 3_2:-60321313 | Msa0414650:CDS |
| CACACAAAGACCCACTTCCA+AGG | 0.594406 | 3_2:-60326071 | Msa0414650:CDS |
| GAAACACTTCAAACAGTTGG+AGG | 0.595588 | 3_2:-60320239 | Msa0414650:CDS |
| CAGCACACACAGCAAGAATG+TGG | 0.597435 | 3_2:-60324957 | Msa0414650:CDS |
| CAAGAAATTGAATGACGTGA+AGG | 0.598467 | 3_2:-60320563 | Msa0414650:CDS |
| GTAACAATCAGCGGAGTCTG+TGG | 0.602771 | 3_2:+60326276 | None:intergenic |
| GAAGCAGCTACATTCGTTGG+TGG | 0.604637 | 3_2:-60324754 | Msa0414650:CDS |
| CAAATGATATCTTCTTCTGG+TGG | 0.606638 | 3_2:+60320593 | None:intergenic |
| TAGTAGTCCATGATTTGCAA+AGG | 0.607664 | 3_2:+60327858 | None:intergenic |
| CAATACACGTAGAAAGAATG+TGG | 0.608038 | 3_2:-60320179 | Msa0414650:CDS |
| GCAATCTCCTATCACCAACA+AGG | 0.608291 | 3_2:+60321390 | None:intergenic |
| GAAGATATCGTTTGGAACGA+TGG | 0.609688 | 3_2:-60323195 | Msa0414650:CDS |
| TTGAAATCAACATTCTGTTG+CGG | 0.614224 | 3_2:+60325445 | None:intergenic |
| CAATCTCCTATCACCAACAA+GGG | 0.614885 | 3_2:+60321391 | None:intergenic |
| AAGAAGTTGCATCAGAACAC+AGG | 0.614949 | 3_2:+60325998 | None:intergenic |
| ATTGCCAAATACTATAGTGA+AGG | 0.616056 | 3_2:-60325079 | Msa0414650:CDS |
| TATTGCAAAGAAAGAAGGAA+GGG | 0.621155 | 3_2:+60328182 | None:intergenic |
| TAGTCCCTGCGTATAACCAA+CGG | 0.621326 | 3_2:+60325131 | None:intergenic |
| TAATGAAGAGCCTTGGAAGT+GGG | 0.621720 | 3_2:+60321303 | None:intergenic |
| TAATGAAGAGCCTTGGAAGT+GGG | 0.621720 | 3_2:+60326061 | None:intergenic |
| TTCGTGCCAGAAATATCTCA+GGG | 0.622554 | 3_2:+60324774 | None:intergenic |
| TAGTCCCACCATATAACCAA+CGG | 0.625409 | 3_2:+60320344 | None:intergenic |
| TATGGAACTCAGCAACATCA+CGG | 0.627880 | 3_2:+60320446 | None:intergenic |
| CGTACCCGTTGGTTATACGC+AGG | 0.632175 | 3_2:-60325136 | Msa0414650:CDS |
| AAAGCAGCTATATTCGTTGG+TGG | 0.633457 | 3_2:-60319976 | Msa0414650:CDS |
| GTACCCGTTGGTTATACGCA+GGG | 0.633787 | 3_2:-60325135 | Msa0414650:CDS |
| TGATATCAGTTTGCAGTTGG+GGG | 0.634885 | 3_2:-60325797 | Msa0414650:CDS |
| TAGTATTCAGCAATAGCTAG+AGG | 0.652060 | 3_2:+60320301 | None:intergenic |
| GAACCAAATGTGATGCAAAG+TGG | 0.658599 | 3_2:+60321416 | None:intergenic |
| GCTGAATACTACAGAAAAGG+CGG | 0.659477 | 3_2:-60320289 | Msa0414650:CDS |
| CCATGTCCAGTAACAATCAG+CGG | 0.663566 | 3_2:+60326267 | None:intergenic |
| TAGCAGTCCAGGATTTACAA+AGG | 0.667997 | 3_2:+60323232 | None:intergenic |
| ACATAGAGAATACACTTCAG+GGG | 0.668289 | 3_2:+60319849 | None:intergenic |
| GTTACTGGACATGGTCTCGG+AGG | 0.686353 | 3_2:-60326258 | Msa0414650:CDS |
| GCTTGATAGGTTGAAAACTG+AGG | 0.693692 | 3_2:-60327597 | Msa0414650:intron |
| GAACCAAAGGTGATGCAGAG+CGG | 0.694968 | 3_2:+60326174 | None:intergenic |
| AATCTCCTATCACCAACAAG+GGG | 0.735230 | 3_2:+60321392 | None:intergenic |
| GGTTGTCAAAGAGAAAGACG+AGG | 0.756705 | 3_2:-60324861 | Msa0414650:CDS |
| TCGTGCCAGAAATATCTCAG+GGG | 0.782489 | 3_2:+60324775 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAGTATAAAAAAATTAA+GGG | - | chr3_2:60322885-60322904 | Msa0414650:intron | 10.0% |
| !!! | ATTATTTTGAAATTTTGATA+CGG | + | chr3_2:60323690-60323709 | None:intergenic | 10.0% |
| !!! | AATGAAATATTTTAACATTA+AGG | - | chr3_2:60323876-60323895 | Msa0414650:intron | 10.0% |
| !! | AATTCTATTACAATAAAAAA+GGG | + | chr3_2:60324702-60324721 | None:intergenic | 10.0% |
| !! | AAATTCTATTACAATAAAAA+AGG | + | chr3_2:60324703-60324722 | None:intergenic | 10.0% |
| !! | GAAAATTAAAACAAAAATTA+AGG | - | chr3_2:60325139-60325158 | Msa0414650:CDS | 10.0% |
| !!! | GGTTTTTTTTTTTTTTTTTT+TGG | - | chr3_2:60325491-60325510 | Msa0414650:intron | 10.0% |
| !!! | GTTTTATTAAATGAGAATAT+TGG | + | chr3_2:60319966-60319985 | None:intergenic | 15.0% |
| !! | AATCAGAAAAATAATCAAAA+AGG | + | chr3_2:60320061-60320080 | None:intergenic | 15.0% |
| !! | AATTATATAACCTTTCTATT+TGG | - | chr3_2:60320107-60320126 | Msa0414650:CDS | 15.0% |
| !! | TAAATGAAATTATAAAGCTA+AGG | + | chr3_2:60320494-60320513 | None:intergenic | 15.0% |
| !! | GAATGAGTATAAAAAAATTA+AGG | - | chr3_2:60322884-60322903 | Msa0414650:intron | 15.0% |
| !! | ATTACAAAATCAGAAATATT+TGG | + | chr3_2:60323098-60323117 | None:intergenic | 15.0% |
| !! | TTTATATAAAAAAATCTAGG+TGG | + | chr3_2:60323585-60323604 | None:intergenic | 15.0% |
| !!! | ACAATAACTCTTTTAATATA+GGG | - | chr3_2:60323772-60323791 | Msa0414650:intron | 15.0% |
| !! | TTTCTTGTAGATTTAATAAA+GGG | + | chr3_2:60324009-60324028 | None:intergenic | 15.0% |
| !! | TAGATGAAATTATAAATCTT+AGG | + | chr3_2:60325114-60325133 | None:intergenic | 15.0% |
| !! | AATCCAAATTATCAATTAAA+GGG | + | chr3_2:60325270-60325289 | None:intergenic | 15.0% |
| !! | TAATCCAAATTATCAATTAA+AGG | + | chr3_2:60325271-60325290 | None:intergenic | 15.0% |
| !! | TATGCCTTATATTTAAAAAA+TGG | - | chr3_2:60325448-60325467 | Msa0414650:CDS | 15.0% |
| !!! | AACACCATTTTTTAAATATA+AGG | + | chr3_2:60325455-60325474 | None:intergenic | 15.0% |
| !!! | TTATTTTTGATAACATATCT+AGG | - | chr3_2:60325917-60325936 | Msa0414650:CDS | 15.0% |
| !!! | AGGATTTTTTTAAATAATCA+TGG | + | chr3_2:60325953-60325972 | None:intergenic | 15.0% |
| !! | ATTATAGTGAATTAAGAAAA+AGG | - | chr3_2:60326827-60326846 | Msa0414650:intron | 15.0% |
| !! | AAAGAAATTATTTGAATTTG+AGG | - | chr3_2:60327560-60327579 | Msa0414650:intron | 15.0% |
| !! | AAAAATAATCAAAAAGGTCA+AGG | + | chr3_2:60320055-60320074 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGCCAAATAGAA+AGG | + | chr3_2:60320120-60320139 | None:intergenic | 20.0% |
| !!! | TATGCCTTATATTTTAAGAA+TGG | - | chr3_2:60320749-60320768 | Msa0414650:intron | 20.0% |
| !! | AACACCATTCTTAAAATATA+AGG | + | chr3_2:60320756-60320775 | None:intergenic | 20.0% |
| !! | AAAATAATCAAGGTAAAGTA+CGG | + | chr3_2:60321189-60321208 | None:intergenic | 20.0% |
| !! | ATATCACTATTACATAGTAT+TGG | - | chr3_2:60321403-60321422 | Msa0414650:CDS | 20.0% |
| !! | AAAATTTCAAAGATAGAATC+TGG | + | chr3_2:60321652-60321671 | None:intergenic | 20.0% |
| !! | AATATAGTAAAAAATCTCCA+TGG | - | chr3_2:60321730-60321749 | Msa0414650:intron | 20.0% |
| !! | ATAATCATCTAATACTGAAT+AGG | - | chr3_2:60321909-60321928 | Msa0414650:intron | 20.0% |
| !! | ATGTTAATCAATTCCATAAA+AGG | - | chr3_2:60322388-60322407 | Msa0414650:intron | 20.0% |
| !! | AAGACTATGTTAATAACAAA+AGG | - | chr3_2:60322565-60322584 | Msa0414650:intron | 20.0% |
| !!! | AAATTCACAAGTTTGTTTTA+AGG | + | chr3_2:60323053-60323072 | None:intergenic | 20.0% |
| !! | TTAAAACAAACTTGTGAATT+TGG | - | chr3_2:60323052-60323071 | Msa0414650:CDS | 20.0% |
| !! | TAAAACAAACTTGTGAATTT+GGG | - | chr3_2:60323053-60323072 | Msa0414650:CDS | 20.0% |
| !! | AAAATCAGAAATATTTGGAA+GGG | + | chr3_2:60323093-60323112 | None:intergenic | 20.0% |
| !!! | ATAATTTATATGTTTCTGCA+TGG | - | chr3_2:60323163-60323182 | Msa0414650:CDS | 20.0% |
| !! | TGACTAATCATTATATATTC+GGG | + | chr3_2:60323654-60323673 | None:intergenic | 20.0% |
| !! | CTGACTAATCATTATATATT+CGG | + | chr3_2:60323655-60323674 | None:intergenic | 20.0% |
| !!! | CACAATAACTCTTTTAATAT+AGG | - | chr3_2:60323771-60323790 | Msa0414650:intron | 20.0% |
| !! | ACAATAAACATGTACTTATA+AGG | - | chr3_2:60323804-60323823 | Msa0414650:intron | 20.0% |
| !! | ATGACAATAAGTAAGTATAT+TGG | - | chr3_2:60323833-60323852 | Msa0414650:intron | 20.0% |
| !! | TTCTTGTAGATTTAATAAAG+GGG | + | chr3_2:60324008-60324027 | None:intergenic | 20.0% |
| !! | CTTTCTTGTAGATTTAATAA+AGG | + | chr3_2:60324010-60324029 | None:intergenic | 20.0% |
| !! | GAAAATGATTGAAGATTATA+TGG | + | chr3_2:60324154-60324173 | None:intergenic | 20.0% |
| !!! | ATTTATAAGTTCAAGTTTTC+AGG | + | chr3_2:60324275-60324294 | None:intergenic | 20.0% |
| !!! | TTTTACAATTATAGCGTTTA+AGG | - | chr3_2:60324486-60324505 | Msa0414650:intron | 20.0% |
| !! | CACGATATAAAAACATATTA+CGG | + | chr3_2:60325008-60325027 | None:intergenic | 20.0% |
| !!! | ATTCTTTATAAACTCTTTTC+AGG | - | chr3_2:60325059-60325078 | Msa0414650:CDS | 20.0% |
| !!! | ATTCCCTTTAATTGATAATT+TGG | - | chr3_2:60325264-60325283 | Msa0414650:CDS | 20.0% |
| !! | AAATGCAAACAAAGTAAAAA+TGG | + | chr3_2:60325640-60325659 | None:intergenic | 20.0% |
| !! | AAAATAAGAAATCATGAACT+CGG | + | chr3_2:60325817-60325836 | None:intergenic | 20.0% |
| !! | ATATCACTATTACAAAATGT+TGG | - | chr3_2:60326161-60326180 | Msa0414650:CDS | 20.0% |
| !! | ATGATAATAAATGTTCCAAA+AGG | + | chr3_2:60326362-60326381 | None:intergenic | 20.0% |
| !! | AGAAATATCTAATACTCAAT+AGG | - | chr3_2:60326668-60326687 | Msa0414650:intron | 20.0% |
| !! | AAGACTATGTTAATAATGAA+AGG | - | chr3_2:60327352-60327371 | Msa0414650:intron | 20.0% |
| !! | CTTAAAAAACTTGTGTATTT+GGG | - | chr3_2:60327823-60327842 | Msa0414650:CDS | 20.0% |
| !!! | TTTTTATTGGTCAAAAACAA+TGG | + | chr3_2:60328020-60328039 | None:intergenic | 20.0% |
| !! | TCAAAATATCATTACTCTAT+TGG | - | chr3_2:60328084-60328103 | Msa0414650:five_prime_UTR | 20.0% |
| ! | ATATGGTTAATTGAAGAGAA+TGG | + | chr3_2:60319504-60319523 | None:intergenic | 25.0% |
| ! | ATGAAATGATTGAGATGATA+TGG | + | chr3_2:60319521-60319540 | None:intergenic | 25.0% |
| !!! | GTTAGTGTCATTTATATATG+AGG | + | chr3_2:60319665-60319684 | None:intergenic | 25.0% |
| ! | TCATCTGATAATTATGAAGA+TGG | - | chr3_2:60319783-60319802 | Msa0414650:three_prime_UTR | 25.0% |
| !!! | TTTTACCATTCTAGCTTTTA+AGG | - | chr3_2:60319848-60319867 | Msa0414650:exon | 25.0% |
| ! | CATAACCTGAAAATTAATCA+TGG | - | chr3_2:60320334-60320353 | Msa0414650:CDS | 25.0% |
| !! | TCATACCATGATTAATTTTC+AGG | + | chr3_2:60320342-60320361 | None:intergenic | 25.0% |
| ! | CATATCTCTTTGCAAATATT+TGG | - | chr3_2:60321109-60321128 | Msa0414650:CDS | 25.0% |
| !!! | TTCTATCTTTGAAATTTTCG+TGG | - | chr3_2:60321654-60321673 | Msa0414650:intron | 25.0% |
| !! | CGATTTCTTGATTTTTATCA+TGG | + | chr3_2:60321693-60321712 | None:intergenic | 25.0% |
| ! | AAATCTAAGAATGAACAGAT+AGG | - | chr3_2:60322321-60322340 | Msa0414650:intron | 25.0% |
| ! | AATCTAAGAATGAACAGATA+GGG | - | chr3_2:60322322-60322341 | Msa0414650:intron | 25.0% |
| ! | TTGATTAACATCATAGTCAT+CGG | + | chr3_2:60322379-60322398 | None:intergenic | 25.0% |
| ! | AAGGAAATTGTTTGAATTTG+AGG | - | chr3_2:60322782-60322801 | Msa0414650:intron | 25.0% |
| !! | AATTTGAGGAGTATGTTTAT+GGG | - | chr3_2:60322796-60322815 | Msa0414650:intron | 25.0% |
| ! | AAGATTAAACAGTATGCTAT+AGG | - | chr3_2:60322954-60322973 | Msa0414650:intron | 25.0% |
| ! | TACATAGTAATTACACTTCA+GGG | + | chr3_2:60322993-60323012 | None:intergenic | 25.0% |
| ! | TTACATAGTAATTACACTTC+AGG | + | chr3_2:60322994-60323013 | None:intergenic | 25.0% |
| ! | CAAAATCAGAAATATTTGGA+AGG | + | chr3_2:60323094-60323113 | None:intergenic | 25.0% |
| !! | TCTGATTTTGTAATATTGCA+TGG | - | chr3_2:60323104-60323123 | Msa0414650:CDS | 25.0% |
| !! | ATTTTGTAATATTGCATGGT+TGG | - | chr3_2:60323108-60323127 | Msa0414650:CDS | 25.0% |
| !! | TTTTGTAATATTGCATGGTT+GGG | - | chr3_2:60323109-60323128 | Msa0414650:CDS | 25.0% |
| !! | AATCATTTTGTAGAGCTAAT+AGG | - | chr3_2:60323355-60323374 | Msa0414650:intron | 25.0% |
| ! | ATTACCCCTTTAATAAATCT+AGG | + | chr3_2:60323618-60323637 | None:intergenic | 25.0% |
| ! | GACTAATCATTATATATTCG+GGG | + | chr3_2:60323653-60323672 | None:intergenic | 25.0% |
| ! | ACAATAAGTAAGTATATTGG+AGG | - | chr3_2:60323836-60323855 | Msa0414650:intron | 25.0% |
| ! | TGACTATTCATTACAATTTC+AGG | - | chr3_2:60323966-60323985 | Msa0414650:intron | 25.0% |
| ! | GACTATTCATTACAATTTCA+GGG | - | chr3_2:60323967-60323986 | Msa0414650:intron | 25.0% |
| ! | TGATTGAAGATTATATGGTT+AGG | + | chr3_2:60324149-60324168 | None:intergenic | 25.0% |
| !! | GAATTTTGAACAGAACTATT+AGG | - | chr3_2:60324717-60324736 | Msa0414650:CDS | 25.0% |
| !!! | AAGGGAATTTATTTTCTTCA+AGG | + | chr3_2:60325252-60325271 | None:intergenic | 25.0% |
| ! | TATGAATACGGTATAATACA+GGG | + | chr3_2:60325981-60326000 | None:intergenic | 25.0% |
| ! | ATATGAATACGGTATAATAC+AGG | + | chr3_2:60325982-60326001 | None:intergenic | 25.0% |
| ! | TGTATTATACCGTATTCATA+TGG | - | chr3_2:60325981-60326000 | Msa0414650:CDS | 25.0% |
| ! | TACATATTGCCATATGAATA+CGG | + | chr3_2:60325993-60326012 | None:intergenic | 25.0% |
| !!! | CAAGTTCTTCATTTTTATCA+TGG | + | chr3_2:60326454-60326473 | None:intergenic | 25.0% |
| ! | CTTTAAATTTGACTAAGTTC+TGG | - | chr3_2:60326723-60326742 | Msa0414650:intron | 25.0% |
| ! | GAAATAAGGTCATGAAAAAT+TGG | + | chr3_2:60326918-60326937 | None:intergenic | 25.0% |
| !! | CCAAGTTAATTCTAGAAATA+AGG | + | chr3_2:60326932-60326951 | None:intergenic | 25.0% |
| !!! | CCTTATTTCTAGAATTAACT+TGG | - | chr3_2:60326929-60326948 | Msa0414650:intron | 25.0% |
| ! | AACGAGTATAAAGTCATTAA+GGG | - | chr3_2:60327663-60327682 | Msa0414650:CDS | 25.0% |
| !!! | CCAAATACACAAGTTTTTTA+AGG | + | chr3_2:60327825-60327844 | None:intergenic | 25.0% |
| ! | CCTTAAAAAACTTGTGTATT+TGG | - | chr3_2:60327822-60327841 | Msa0414650:CDS | 25.0% |
| ! | TATGATTCTGTCATATTGTA+CGG | - | chr3_2:60327874-60327893 | Msa0414650:CDS | 25.0% |
| !!! | TTGTTTTTCGCACTTTTTAT+TGG | + | chr3_2:60328033-60328052 | None:intergenic | 25.0% |
| !! | AATAAAAAGTGCGAAAAACA+AGG | - | chr3_2:60328032-60328051 | Msa0414650:intron | 25.0% |
| ! | TTGGTATGTTTAACATGAAT+AGG | - | chr3_2:60328129-60328148 | Msa0414650:intron | 25.0% |
| ! | AGATAAATGAAAAATGTGAG+AGG | - | chr3_2:60328204-60328223 | Msa0414650:five_prime_UTR | 25.0% |
| ! | GATAAATGAAAAATGTGAGA+GGG | - | chr3_2:60328205-60328224 | Msa0414650:five_prime_UTR | 25.0% |
| TATTGCAAAGAAAGAAGGAA+GGG | + | chr3_2:60319437-60319456 | None:intergenic | 30.0% | |
| GATGAAATTGATGAGAATGA+AGG | + | chr3_2:60319460-60319479 | None:intergenic | 30.0% | |
| AGAAATGAAAAAGTCATGCA+TGG | + | chr3_2:60319616-60319635 | None:intergenic | 30.0% | |
| GATAATTATGAAGATGGTGT+TGG | - | chr3_2:60319789-60319808 | Msa0414650:three_prime_UTR | 30.0% | |
| TGGAAACTTGATAAAGAAAC+TGG | - | chr3_2:60319819-60319838 | Msa0414650:three_prime_UTR | 30.0% | |
| TAGAGTTTGATGTGTAGATT+TGG | - | chr3_2:60320141-60320160 | Msa0414650:CDS | 30.0% | |
| TGAGCTATTAAGTATGTCTT+AGG | - | chr3_2:60320174-60320193 | Msa0414650:CDS | 30.0% | |
| GAGCTATTAAGTATGTCTTA+GGG | - | chr3_2:60320175-60320194 | Msa0414650:CDS | 30.0% | |
| !! | AAGCACTTGTTAGACTTTTT+AGG | - | chr3_2:60320212-60320231 | Msa0414650:CDS | 30.0% |
| !! | AGCACTTGTTAGACTTTTTA+GGG | - | chr3_2:60320213-60320232 | Msa0414650:CDS | 30.0% |
| TTTAGGGAAGCTTATGAAAA+CGG | - | chr3_2:60320229-60320248 | Msa0414650:CDS | 30.0% | |
| ! | ACTCCTTATAAATGCTTTTC+AGG | - | chr3_2:60320411-60320430 | Msa0414650:CDS | 30.0% |
| AAGGATTAAAACAAGTTGTG+AGG | + | chr3_2:60320475-60320494 | None:intergenic | 30.0% | |
| ! | CAAGTTGGCACATTTATTAA+AGG | + | chr3_2:60320562-60320581 | None:intergenic | 30.0% |
| CTTTAATAAATGTGCCAACT+TGG | - | chr3_2:60320560-60320579 | Msa0414650:CDS | 30.0% | |
| GCTTAGATAAACACCTTTAA+TGG | + | chr3_2:60320675-60320694 | None:intergenic | 30.0% | |
| !! | TCTAAGCTGTGAAAAGTATT+TGG | - | chr3_2:60320688-60320707 | Msa0414650:intron | 30.0% |
| GCATTAAGATTGCTACATAA+GGG | + | chr3_2:60321303-60321322 | None:intergenic | 30.0% | |
| TGCATTAAGATTGCTACATA+AGG | + | chr3_2:60321304-60321323 | None:intergenic | 30.0% | |
| !! | TTGATTTTTATCATGGACTG+AGG | + | chr3_2:60321686-60321705 | None:intergenic | 30.0% |
| ! | GAAATCGAATCTGTTGATTA+TGG | - | chr3_2:60321706-60321725 | Msa0414650:intron | 30.0% |
| TTGAAATCAACATTCTGTTG+CGG | + | chr3_2:60322174-60322193 | None:intergenic | 30.0% | |
| !! | CTTTTTGTACCATTCAAGTT+GGG | + | chr3_2:60322301-60322320 | None:intergenic | 30.0% |
| ! | TCTTTTTGTACCATTCAAGT+TGG | + | chr3_2:60322302-60322321 | None:intergenic | 30.0% |
| TGATTAACATCATAGTCATC+GGG | + | chr3_2:60322378-60322397 | None:intergenic | 30.0% | |
| ! | AATAAAAGGTGAGCCTTTTA+TGG | + | chr3_2:60322404-60322423 | None:intergenic | 30.0% |
| ! | ATAAAAGGCTCACCTTTTAT+TGG | - | chr3_2:60322403-60322422 | Msa0414650:intron | 30.0% |
| ! | TAAAAGGCTCACCTTTTATT+GGG | - | chr3_2:60322404-60322423 | Msa0414650:intron | 30.0% |
| TTCACTATAGTATTTGGCAA+TGG | + | chr3_2:60322538-60322557 | None:intergenic | 30.0% | |
| ATTGCCAAATACTATAGTGA+AGG | - | chr3_2:60322537-60322556 | Msa0414650:intron | 30.0% | |
| ! | TGACTATAGATTCTTGCTTT+TGG | - | chr3_2:60322691-60322710 | Msa0414650:intron | 30.0% |
| !! | GACTATAGATTCTTGCTTTT+GGG | - | chr3_2:60322692-60322711 | Msa0414650:intron | 30.0% |
| ! | GAATTTGAGGAGTATGTTTA+TGG | - | chr3_2:60322795-60322814 | Msa0414650:intron | 30.0% |
| ACATAGTAATTACACTTCAG+GGG | + | chr3_2:60322992-60323011 | None:intergenic | 30.0% | |
| !!! | TCACAAGTTTGTTTTAAGGA+AGG | + | chr3_2:60323049-60323068 | None:intergenic | 30.0% |
| !! | AAGTTTTGTGGATATTCAGT+TGG | - | chr3_2:60323138-60323157 | Msa0414650:CDS | 30.0% |
| !! | AGATACTGTTTCTATCTGAT+AGG | - | chr3_2:60323190-60323209 | Msa0414650:CDS | 30.0% |
| AACTGTGCAACTAACTAATT+AGG | - | chr3_2:60323252-60323271 | Msa0414650:CDS | 30.0% | |
| !! | GAATTTCTGGGAATTTTTCA+AGG | + | chr3_2:60323421-60323440 | None:intergenic | 30.0% |
| TTTAAGAGTAGGAATTTCTG+AGG | + | chr3_2:60323455-60323474 | None:intergenic | 30.0% | |
| AGACCACCTAGATTTATTAA+AGG | - | chr3_2:60323609-60323628 | Msa0414650:intron | 30.0% | |
| GACCACCTAGATTTATTAAA+GGG | - | chr3_2:60323610-60323629 | Msa0414650:intron | 30.0% | |
| ACCACCTAGATTTATTAAAG+GGG | - | chr3_2:60323611-60323630 | Msa0414650:intron | 30.0% | |
| !! | TGAAATTTTGATACGGTGAA+GGG | + | chr3_2:60323683-60323702 | None:intergenic | 30.0% |
| !! | TTGAAATTTTGATACGGTGA+AGG | + | chr3_2:60323684-60323703 | None:intergenic | 30.0% |
| ACTAATAGAATGCACAATCA+GGG | + | chr3_2:60323713-60323732 | None:intergenic | 30.0% | |
| ACTAACAAAATGCACAATCA+GGG | - | chr3_2:60323908-60323927 | Msa0414650:intron | 30.0% | |
| ATAAAGGGGTAATAGTCATT+TGG | + | chr3_2:60323994-60324013 | None:intergenic | 30.0% | |
| !! | ATTGCAAAGAAGGGTATTAA+GGG | + | chr3_2:60324100-60324119 | None:intergenic | 30.0% |
| AGTGGTCTTTAAATAGTTGA+AGG | + | chr3_2:60324124-60324143 | None:intergenic | 30.0% | |
| AGATTATATGGTTAGGAAAG+TGG | + | chr3_2:60324142-60324161 | None:intergenic | 30.0% | |
| ACAAATGAAGAAGTAATGCA+TGG | + | chr3_2:60324230-60324249 | None:intergenic | 30.0% | |
| ! | CTGATAATGAAGATATCGTT+TGG | - | chr3_2:60324413-60324432 | Msa0414650:intron | 30.0% |
| AACTAAATCAGCTTGAACAT+TGG | + | chr3_2:60324521-60324540 | None:intergenic | 30.0% | |
| AGTTTCTTCAACTGAACTTA+AGG | - | chr3_2:60324537-60324556 | Msa0414650:intron | 30.0% | |
| TTCCAATATTCTCTCTTAAC+AGG | - | chr3_2:60324602-60324621 | Msa0414650:intron | 30.0% | |
| ACTTGAGAAGTTGAAAATTG+AGG | - | chr3_2:60324660-60324679 | Msa0414650:intron | 30.0% | |
| ATTGAGGTATATCTCATCTT+TGG | - | chr3_2:60324676-60324695 | Msa0414650:CDS | 30.0% | |
| GAACTATTAGGTAGAATTTC+TGG | - | chr3_2:60324729-60324748 | Msa0414650:CDS | 30.0% | |
| !! | TATTAGGTAGAATTTCTGGT+TGG | - | chr3_2:60324733-60324752 | Msa0414650:CDS | 30.0% |
| !! | ATTAGGTAGAATTTCTGGTT+GGG | - | chr3_2:60324734-60324753 | Msa0414650:CDS | 30.0% |
| TGGTGTTTGGATATAAATAG+TGG | - | chr3_2:60324859-60324878 | Msa0414650:CDS | 30.0% | |
| !! | TGATACCATTTTAGAAATCG+TGG | - | chr3_2:60324925-60324944 | Msa0414650:CDS | 30.0% |
| TGAATTGCTTAATCGATCAT+TGG | + | chr3_2:60325326-60325345 | None:intergenic | 30.0% | |
| GGTAAACTTATGAGATTAGT+TGG | - | chr3_2:60325512-60325531 | Msa0414650:intron | 30.0% | |
| AAGTCTAGATACGTCAAAAA+TGG | - | chr3_2:60325583-60325602 | Msa0414650:intron | 30.0% | |
| AGATACGTCAAAAATGGAAA+AGG | - | chr3_2:60325589-60325608 | Msa0414650:intron | 30.0% | |
| GTAGATGGACAAAACAATTT+GGG | + | chr3_2:60325681-60325700 | None:intergenic | 30.0% | |
| TGTAGATGGACAAAACAATT+TGG | + | chr3_2:60325682-60325701 | None:intergenic | 30.0% | |
| TCATATGGCAATATGTATCT+AGG | - | chr3_2:60325996-60326015 | Msa0414650:CDS | 30.0% | |
| GCGTTAACATTGTTACATAA+GGG | + | chr3_2:60326058-60326077 | None:intergenic | 30.0% | |
| TGCGTTAACATTGTTACATA+AGG | + | chr3_2:60326059-60326078 | None:intergenic | 30.0% | |
| !! | CTATTACAAAATGTTGGTTC+AGG | - | chr3_2:60326167-60326186 | Msa0414650:CDS | 30.0% |
| ! | TGTATCACGTAGTTCTATTT+GGG | - | chr3_2:60326256-60326275 | Msa0414650:CDS | 30.0% |
| !! | TTCATTTTTATCATGGACTG+AGG | + | chr3_2:60326447-60326466 | None:intergenic | 30.0% |
| ! | GAACTTGAATCTGTTGATTA+TGG | - | chr3_2:60326467-60326486 | Msa0414650:intron | 30.0% |
| CATGAAAAATTGGAGTTTAC+AGG | + | chr3_2:60326908-60326927 | None:intergenic | 30.0% | |
| GATCAAATGATATCTTCTTC+TGG | + | chr3_2:60327029-60327048 | None:intergenic | 30.0% | |
| !! | CTTTTTGTACCATTCAAGTT+GGG | + | chr3_2:60322301-60322320 | None:intergenic | 30.0% |
| CAACTAAGAATCTACAAGTA+GGG | - | chr3_2:60327109-60327128 | Msa0414650:intron | 30.0% | |
| ! | AGTAAATGGTGAGCTTTTTA+TGG | + | chr3_2:60327191-60327210 | None:intergenic | 30.0% |
| ATAAAAAGCTCACCATTTAC+TGG | - | chr3_2:60327190-60327209 | Msa0414650:intron | 30.0% | |
| TAAAAAGCTCACCATTTACT+GGG | - | chr3_2:60327191-60327210 | Msa0414650:intron | 30.0% | |
| ATTGCTGAATACTACAGAAA+AGG | - | chr3_2:60327324-60327343 | Msa0414650:intron | 30.0% | |
| GTATTGTTTGTATCACTTGT+TGG | + | chr3_2:60327423-60327442 | None:intergenic | 30.0% | |
| ! | ACTTTTATGCAGAGAGTTAA+AGG | - | chr3_2:60327512-60327531 | Msa0414650:intron | 30.0% |
| GTATGTTTATAAGTTGCTCA+AGG | - | chr3_2:60327584-60327603 | Msa0414650:intron | 30.0% | |
| GAACGAGTATAAAGTCATTA+AGG | - | chr3_2:60327662-60327681 | Msa0414650:CDS | 30.0% | |
| AAGATTGAGCAATATGCTAT+AGG | - | chr3_2:60327732-60327751 | Msa0414650:CDS | 30.0% | |
| TACATAGAGAATACACTTCA+GGG | + | chr3_2:60327771-60327790 | None:intergenic | 30.0% | |
| TTACATAGAGAATACACTTC+AGG | + | chr3_2:60327772-60327791 | None:intergenic | 30.0% | |
| AAAAAACTTGTGTATTTGGG+AGG | - | chr3_2:60327826-60327845 | Msa0414650:CDS | 30.0% | |
| ACAGAATCATAATTGTTCAG+AGG | + | chr3_2:60327865-60327884 | None:intergenic | 30.0% | |
| TACGGTTTGTAGAAACTTAT+TGG | - | chr3_2:60327892-60327911 | Msa0414650:CDS | 30.0% | |
| !! | CAACCACTTTTGACAATTTT+TGG | - | chr3_2:60327935-60327954 | Msa0414650:intron | 30.0% |
| TGTCCAAAAATTGTCAAAAG+TGG | + | chr3_2:60327941-60327960 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr3_2:60328007-60328026 | None:intergenic | 30.0% | |
| TCAAGAAAGTTGTCATCAAA+TGG | - | chr3_2:60328058-60328077 | Msa0414650:intron | 30.0% | |
| !! | GTAAATGATGATTTGCTTCA+AGG | - | chr3_2:60328106-60328125 | Msa0414650:intron | 30.0% |
| TATTAGAAGAAGACGTGAAG+TGG | + | chr3_2:60319408-60319427 | None:intergenic | 35.0% | |
| GTATTGCAAAGAAAGAAGGA+AGG | + | chr3_2:60319438-60319457 | None:intergenic | 35.0% | |
| !! | GAAGGTATTGCAAAGAAAGA+AGG | + | chr3_2:60319442-60319461 | None:intergenic | 35.0% |
| AGATTGTGTCATAGTGAACT+TGG | + | chr3_2:60319550-60319569 | None:intergenic | 35.0% | |
| ! | TTTTCTTGCAGATTTAGCAG+TGG | - | chr3_2:60319699-60319718 | Msa0414650:intron | 35.0% |
| ! | TAGTAGTCCATGATTTGCAA+AGG | + | chr3_2:60319761-60319780 | None:intergenic | 35.0% |
| AGAAGCCTTAAAAGCTAGAA+TGG | + | chr3_2:60319856-60319875 | None:intergenic | 35.0% | |
| !! | GTTGTTTTCATACGCTATCT+AGG | + | chr3_2:60320302-60320321 | None:intergenic | 35.0% |
| AAAACTCCTTCATCCAAACA+GGG | + | chr3_2:60320391-60320410 | None:intergenic | 35.0% | |
| TAAAACTCCTTCATCCAAAC+AGG | + | chr3_2:60320392-60320411 | None:intergenic | 35.0% | |
| !! | AGGCCTGAAAAGCATTTATA+AGG | + | chr3_2:60320417-60320436 | None:intergenic | 35.0% |
| ! | CCAACTTGGATTGATAGTTT+GGG | - | chr3_2:60320574-60320593 | Msa0414650:CDS | 35.0% |
| TTCAGGTGTTAGACCATTAA+AGG | - | chr3_2:60320659-60320678 | Msa0414650:CDS | 35.0% | |
| !! | AAGCTGTGAAAAGTATTTGG+TGG | - | chr3_2:60320691-60320710 | Msa0414650:intron | 35.0% |
| !! | AGCTGTGAAAAGTATTTGGT+GGG | - | chr3_2:60320692-60320711 | Msa0414650:intron | 35.0% |
| !! | TGAAAAGTATTTGGTGGGTA+GGG | - | chr3_2:60320697-60320716 | Msa0414650:intron | 35.0% |
| TGGTGTTTGTGATAAAGTCA+TGG | - | chr3_2:60320769-60320788 | Msa0414650:intron | 35.0% | |
| TCATGGAAATCCTCATTTCT+GGG | - | chr3_2:60320786-60320805 | Msa0414650:intron | 35.0% | |
| TAAAAATAGCCCCAGAAATG+AGG | + | chr3_2:60320799-60320818 | None:intergenic | 35.0% | |
| ! | TGCTGAGTTGTTGTTCTATT+TGG | - | chr3_2:60320845-60320864 | Msa0414650:intron | 35.0% |
| ATGCATAAAATGTGTCAACC+AGG | + | chr3_2:60320888-60320907 | None:intergenic | 35.0% | |
| AAAGAGCTAGAAATGAGCTT+GGG | + | chr3_2:60320932-60320951 | None:intergenic | 35.0% | |
| AAAAGAGCTAGAAATGAGCT+TGG | + | chr3_2:60320933-60320952 | None:intergenic | 35.0% | |
| ATATGAGTACAGCACAATAC+GGG | + | chr3_2:60321227-60321246 | None:intergenic | 35.0% | |
| GATATGAGTACAGCACAATA+CGG | + | chr3_2:60321228-60321247 | None:intergenic | 35.0% | |
| TTGCTACATAAGGGATTGAA+GGG | + | chr3_2:60321294-60321313 | None:intergenic | 35.0% | |
| ATTGCTACATAAGGGATTGA+AGG | + | chr3_2:60321295-60321314 | None:intergenic | 35.0% | |
| CCAAATAGAACTACGTGATA+TGG | + | chr3_2:60321500-60321519 | None:intergenic | 35.0% | |
| ! | CCATATCACGTAGTTCTATT+TGG | - | chr3_2:60321497-60321516 | Msa0414650:CDS | 35.0% |
| !!! | CTTTGAAATTTTCGTGGCAT+TGG | - | chr3_2:60321660-60321679 | Msa0414650:intron | 35.0% |
| ! | AGCAACATGGATAGATTTTC+CGG | - | chr3_2:60321756-60321775 | Msa0414650:intron | 35.0% |
| ATATCAGTTGCTAGTGAATC+TGG | + | chr3_2:60321805-60321824 | None:intergenic | 35.0% | |
| AACTGATATCAGTTTGCAGT+TGG | - | chr3_2:60321816-60321835 | Msa0414650:intron | 35.0% | |
| ACTGATATCAGTTTGCAGTT+GGG | - | chr3_2:60321817-60321836 | Msa0414650:intron | 35.0% | |
| CATCTAATACTGAATAGGTG+TGG | - | chr3_2:60321914-60321933 | Msa0414650:intron | 35.0% | |
| ! | ACAGAACAACCCTTTTGATA+AGG | - | chr3_2:60321994-60322013 | Msa0414650:intron | 35.0% |
| ! | CAGAACAACCCTTTTGATAA+GGG | - | chr3_2:60321995-60322014 | Msa0414650:intron | 35.0% |
| AAAGATTCTTCCTGCAGAAA+AGG | - | chr3_2:60322226-60322245 | Msa0414650:intron | 35.0% | |
| ! | CAAACAATATCCTTTTCTGC+AGG | + | chr3_2:60322239-60322258 | None:intergenic | 35.0% |
| CTGTCATTCAACTTCTTTGA+TGG | + | chr3_2:60322264-60322283 | None:intergenic | 35.0% | |
| CATCAAAGAAGTTGAATGAC+AGG | - | chr3_2:60322262-60322281 | Msa0414650:intron | 35.0% | |
| AACCATCTTCTCCCAATAAA+AGG | + | chr3_2:60322418-60322437 | None:intergenic | 35.0% | |
| TAGTATTTGGCAATGGATAG+TGG | + | chr3_2:60322531-60322550 | None:intergenic | 35.0% | |
| ACCACCTTCACTATAGTATT+TGG | + | chr3_2:60322544-60322563 | None:intergenic | 35.0% | |
| GTCTGAACATTTCAAACAGT+TGG | - | chr3_2:60322587-60322606 | Msa0414650:intron | 35.0% | |
| TGAACATTTCAAACAGTTGG+AGG | - | chr3_2:60322590-60322609 | Msa0414650:intron | 35.0% | |
| AACAAACTTGTGAATTTGGG+AGG | - | chr3_2:60323056-60323075 | Msa0414650:CDS | 35.0% | |
| ! | GTTGGGATTGTTAAGTTTTG+TGG | - | chr3_2:60323126-60323145 | Msa0414650:CDS | 35.0% |
| GCACTAGGACAAAACTTATA+AGG | + | chr3_2:60323286-60323305 | None:intergenic | 35.0% | |
| GTTAGGATCAGAGAATTTCT+GGG | + | chr3_2:60323433-60323452 | None:intergenic | 35.0% | |
| ACCCCTTTAATAAATCTAGG+TGG | + | chr3_2:60323615-60323634 | None:intergenic | 35.0% | |
| GACTAATAGAATGCACAATC+AGG | + | chr3_2:60323714-60323733 | None:intergenic | 35.0% | |
| GAGTTATTGTGAACATTGAG+AGG | + | chr3_2:60323762-60323781 | None:intergenic | 35.0% | |
| GACTAACAAAATGCACAATC+AGG | - | chr3_2:60323907-60323926 | Msa0414650:intron | 35.0% | |
| !! | CATTGCAAAGAAGGGTATTA+AGG | + | chr3_2:60324101-60324120 | None:intergenic | 35.0% |
| ! | TTTTCTTGCAGATTTAGCAG+TGG | - | chr3_2:60319699-60319718 | Msa0414650:intron | 35.0% |
| CTAGTATCCTTTGTAAATCC+TGG | - | chr3_2:60324377-60324396 | Msa0414650:intron | 35.0% | |
| !! | ACGATGGTATTGATCTTTCT+TGG | - | chr3_2:60324437-60324456 | Msa0414650:intron | 35.0% |
| GTCCTGTTAAGAGAGAATAT+TGG | + | chr3_2:60324607-60324626 | None:intergenic | 35.0% | |
| !! | ACCATTTTAGAAATCGTGGT+TGG | - | chr3_2:60324929-60324948 | Msa0414650:CDS | 35.0% |
| !! | CCATTTTAGAAATCGTGGTT+GGG | - | chr3_2:60324930-60324949 | Msa0414650:CDS | 35.0% |
| ATATTACGGTGTGATAAGTG+GGG | + | chr3_2:60324994-60325013 | None:intergenic | 35.0% | |
| CATATTACGGTGTGATAAGT+GGG | + | chr3_2:60324995-60325014 | None:intergenic | 35.0% | |
| ACATATTACGGTGTGATAAG+TGG | + | chr3_2:60324996-60325015 | None:intergenic | 35.0% | |
| TAGGATCAAAACAAGTTGCA+AGG | + | chr3_2:60325095-60325114 | None:intergenic | 35.0% | |
| ! | CAAAAGGGAACTTCTTTTCA+AGG | + | chr3_2:60325173-60325192 | None:intergenic | 35.0% |
| ACAGCAACATACAGACAAAA+GGG | + | chr3_2:60325188-60325207 | None:intergenic | 35.0% | |
| AACAGCAACATACAGACAAA+AGG | + | chr3_2:60325189-60325208 | None:intergenic | 35.0% | |
| AATCATGTGAGCAAAACAAC+AGG | + | chr3_2:60325297-60325316 | None:intergenic | 35.0% | |
| ATCAGACTATCAGAGATGTT+TGG | - | chr3_2:60325349-60325368 | Msa0414650:CDS | 35.0% | |
| ! | TCAAGTACTTTTCACAAGTG+AGG | + | chr3_2:60325390-60325409 | None:intergenic | 35.0% |
| !! | TCACTTGTGAAAAGTACTTG+AGG | - | chr3_2:60325389-60325408 | Msa0414650:CDS | 35.0% |
| !! | TGAAAAGTACTTGAGGAGTA+GGG | - | chr3_2:60325396-60325415 | Msa0414650:CDS | 35.0% |
| ! | AATGGTGTTTGAGATAGTAG+TGG | - | chr3_2:60325466-60325485 | Msa0414650:intron | 35.0% |
| TTGTTACATAAGGGATTGCA+GGG | + | chr3_2:60326049-60326068 | None:intergenic | 35.0% | |
| ATTGTTACATAAGGGATTGC+AGG | + | chr3_2:60326050-60326069 | None:intergenic | 35.0% | |
| ! | CTGTATCACGTAGTTCTATT+TGG | - | chr3_2:60326255-60326274 | Msa0414650:CDS | 35.0% |
| ! | ACCAGTAATTACATGCCTTT+TGG | - | chr3_2:60326344-60326363 | Msa0414650:intron | 35.0% |
| ! | TCCAAAAGGCATGTAATTAC+TGG | + | chr3_2:60326348-60326367 | None:intergenic | 35.0% |
| TGAGAACACAGATTCTATCT+TGG | - | chr3_2:60326403-60326422 | Msa0414650:intron | 35.0% | |
| TTCTATCTTGGAAATTCTCG+TGG | - | chr3_2:60326415-60326434 | Msa0414650:intron | 35.0% | |
| TATCTTGAAGCAGAATGCTT+AGG | - | chr3_2:60326509-60326528 | Msa0414650:intron | 35.0% | |
| GGCTGAAAACATGACTAATA+AGG | - | chr3_2:60326544-60326563 | Msa0414650:intron | 35.0% | |
| CATGACTAATAAGGATTCAC+TGG | - | chr3_2:60326553-60326572 | Msa0414650:intron | 35.0% | |
| TATTCACTTACCTGCATATG+TGG | + | chr3_2:60326620-60326639 | None:intergenic | 35.0% | |
| TCGAAGCTTGTAGGATAATT+GGG | - | chr3_2:60326779-60326798 | Msa0414650:intron | 35.0% | |
| CAAATGATATCTTCTTCTGG+TGG | + | chr3_2:60327026-60327045 | None:intergenic | 35.0% | |
| ACGTCATTCAATTTCTTGGA+TGG | + | chr3_2:60327051-60327070 | None:intergenic | 35.0% | |
| CTTCACGTCATTCAATTTCT+TGG | + | chr3_2:60327055-60327074 | None:intergenic | 35.0% | |
| CAAGAAATTGAATGACGTGA+AGG | - | chr3_2:60327053-60327072 | Msa0414650:intron | 35.0% | |
| ! | CCTTTTTGTACCATTCAAGT+TGG | + | chr3_2:60327089-60327108 | None:intergenic | 35.0% |
| CCAACTTGAATGGTACAAAA+AGG | - | chr3_2:60322299-60322318 | Msa0414650:intron | 35.0% | |
| GCAACTAAGAATCTACAAGT+AGG | - | chr3_2:60327108-60327127 | Msa0414650:intron | 35.0% | |
| ! | AACCATTTTCTCCCAGTAAA+TGG | + | chr3_2:60327205-60327224 | None:intergenic | 35.0% |
| CAGATGAAACCTCAAAAAGA+AGG | - | chr3_2:60327234-60327253 | Msa0414650:intron | 35.0% | |
| TAGTATTCAGCAATAGCTAG+AGG | + | chr3_2:60327318-60327337 | None:intergenic | 35.0% | |
| CAATACACGTAGAAAGAATG+TGG | - | chr3_2:60327437-60327456 | Msa0414650:intron | 35.0% | |
| ! | TGACTACAGATTCTTGCTTT+TGG | - | chr3_2:60327469-60327488 | Msa0414650:intron | 35.0% |
| !! | GACTACAGATTCTTGCTTTT+GGG | - | chr3_2:60327470-60327489 | Msa0414650:intron | 35.0% |
| CTTTGCGCTAGAAAAATATC+TGG | + | chr3_2:60327624-60327643 | None:intergenic | 35.0% | |
| ACATAGAGAATACACTTCAG+GGG | + | chr3_2:60327770-60327789 | None:intergenic | 35.0% | |
| !! | ATGATGATTTGCTTCAAGGT+TGG | - | chr3_2:60328110-60328129 | Msa0414650:intron | 35.0% |
| TGTGTCATAGTGAACTTGGT+TGG | + | chr3_2:60319546-60319565 | None:intergenic | 40.0% | |
| TGAAAAAGTCATGCATGGCA+TGG | + | chr3_2:60319611-60319630 | None:intergenic | 40.0% | |
| ! | AGTCCATGATTTGCAAAGGA+TGG | + | chr3_2:60319757-60319776 | None:intergenic | 40.0% |
| ! | AAGATGGTGTTGGACTTTCT+TGG | - | chr3_2:60319799-60319818 | Msa0414650:three_prime_UTR | 40.0% |
| TTCCAGTGTTCAAGCTGATT+TGG | - | chr3_2:60319875-60319894 | Msa0414650:CDS | 40.0% | |
| AACCAAATCAGCTTGAACAC+TGG | + | chr3_2:60319880-60319899 | None:intergenic | 40.0% | |
| GGTTTCTTCTGCTGAACTTA+AGG | - | chr3_2:60319896-60319915 | Msa0414650:CDS | 40.0% | |
| TTCTTCTGCTGAACTTAAGG+AGG | - | chr3_2:60319899-60319918 | Msa0414650:CDS | 40.0% | |
| AAAATCACCAGGAGCTTGAT+AGG | - | chr3_2:60320006-60320025 | Msa0414650:CDS | 40.0% | |
| ! | TTTTCAACCTATCAAGCTCC+TGG | + | chr3_2:60320016-60320035 | None:intergenic | 40.0% |
| ! | GCTTGATAGGTTGAAAACTG+AGG | - | chr3_2:60320019-60320038 | Msa0414650:CDS | 40.0% |
| AAGGTCGTTGTTTAGCTAGA+AGG | + | chr3_2:60320543-60320562 | None:intergenic | 40.0% | |
| ! | GCCAACTTGGATTGATAGTT+TGG | - | chr3_2:60320573-60320592 | Msa0414650:CDS | 40.0% |
| CCCAAACTATCAATCCAAGT+TGG | + | chr3_2:60320577-60320596 | None:intergenic | 40.0% | |
| AGCCAGTGATTAAGCAATTC+AGG | - | chr3_2:60320642-60320661 | Msa0414650:CDS | 40.0% | |
| CACCTGAATTGCTTAATCAC+TGG | + | chr3_2:60320647-60320666 | None:intergenic | 40.0% | |
| !! | GTGAAAAGTATTTGGTGGGT+AGG | - | chr3_2:60320696-60320715 | Msa0414650:intron | 40.0% |
| !! | GAAAAGTATTTGGTGGGTAG+GGG | - | chr3_2:60320698-60320717 | Msa0414650:intron | 40.0% |
| GTCATGGAAATCCTCATTTC+TGG | - | chr3_2:60320785-60320804 | Msa0414650:intron | 40.0% | |
| CATGGAAATCCTCATTTCTG+GGG | - | chr3_2:60320787-60320806 | Msa0414650:intron | 40.0% | |
| CAACAAAGGATACACAAAGC+AGG | + | chr3_2:60320827-60320846 | None:intergenic | 40.0% | |
| GAACAACAACTCAGCAACAA+AGG | + | chr3_2:60320841-60320860 | None:intergenic | 40.0% | |
| TAGAGCAAGAAAGGAGGTTA+GGG | + | chr3_2:60321081-60321100 | None:intergenic | 40.0% | |
| TATGAGTACAGCACAATACG+GGG | + | chr3_2:60321226-60321245 | None:intergenic | 40.0% | |
| ATTGTTACTGGACATGGTCT+CGG | - | chr3_2:60321355-60321374 | Msa0414650:CDS | 40.0% | |
| TAATGAAGAGCCTTGGAAGT+GGG | + | chr3_2:60321558-60321577 | None:intergenic | 40.0% | |
| ! | GAATGTTCCAAAAGGCATGT+AGG | + | chr3_2:60321596-60321615 | None:intergenic | 40.0% |
| CACAGGATGAATGTTCCAAA+AGG | + | chr3_2:60321604-60321623 | None:intergenic | 40.0% | |
| AAGAAGTTGCATCAGAACAC+AGG | + | chr3_2:60321621-60321640 | None:intergenic | 40.0% | |
| ATCTCCATGGTAAAGCAACA+TGG | - | chr3_2:60321743-60321762 | Msa0414650:intron | 40.0% | |
| !! | CTATCCATGTTGCTTTACCA+TGG | + | chr3_2:60321750-60321769 | None:intergenic | 40.0% |
| CTGATATCAGTTTGCAGTTG+GGG | - | chr3_2:60321818-60321837 | Msa0414650:intron | 40.0% | |
| TGATATCAGTTTGCAGTTGG+GGG | - | chr3_2:60321819-60321838 | Msa0414650:intron | 40.0% | |
| AAGTTTGACACCACATATGC+AGG | - | chr3_2:60321846-60321865 | Msa0414650:intron | 40.0% | |
| TATTCTCCTACCTGCATATG+TGG | + | chr3_2:60321859-60321878 | None:intergenic | 40.0% | |
| ATCAAAAGGGTTGTTCTGTG+AGG | + | chr3_2:60321993-60322012 | None:intergenic | 40.0% | |
| GTTCTTCGCCCTTATCAAAA+GGG | + | chr3_2:60322006-60322025 | None:intergenic | 40.0% | |
| AGTTCTTCGCCCTTATCAAA+AGG | + | chr3_2:60322007-60322026 | None:intergenic | 40.0% | |
| CACGACTAAGTTCTTGAATG+AGG | - | chr3_2:60322032-60322051 | Msa0414650:intron | 40.0% | |
| GAATGACAGGAAGCTAGATA+TGG | - | chr3_2:60322275-60322294 | Msa0414650:intron | 40.0% | |
| TAGATATGGCCCAACTTGAA+TGG | - | chr3_2:60322289-60322308 | Msa0414650:intron | 40.0% | |
| ! | CACCTTTTATTGGGAGAAGA+TGG | - | chr3_2:60322413-60322432 | Msa0414650:intron | 40.0% |
| GAGATGAAGCCTCAAAAAGA+AGG | - | chr3_2:60322447-60322466 | Msa0414650:intron | 40.0% | |
| ! | AAAGCTGCACCTTCTTTTTG+AGG | + | chr3_2:60322459-60322478 | None:intergenic | 40.0% |
| GCCAAATACTATAGTGAAGG+TGG | - | chr3_2:60322540-60322559 | Msa0414650:intron | 40.0% | |
| ATTTCAAACAGTTGGAGGAG+TGG | - | chr3_2:60322595-60322614 | Msa0414650:intron | 40.0% | |
| ! | GAAGAGGCTCTTCTTTTATG+CGG | - | chr3_2:60322723-60322742 | Msa0414650:intron | 40.0% |
| ! | GTATGTTTATGGGTTGCTCA+AGG | - | chr3_2:60322806-60322825 | Msa0414650:intron | 40.0% |
| TTCGTGCCAGAAATATCTCA+GGG | + | chr3_2:60322845-60322864 | None:intergenic | 40.0% | |
| TCAATACTCACTTCTGCACT+AGG | + | chr3_2:60323301-60323320 | None:intergenic | 40.0% | |
| TCAAGGACTAGATCAAGAGA+TGG | + | chr3_2:60323404-60323423 | None:intergenic | 40.0% | |
| GGTTAGGATCAGAGAATTTC+TGG | + | chr3_2:60323434-60323453 | None:intergenic | 40.0% | |
| !! | GAGTAGGAATTTCTGAGGTT+AGG | + | chr3_2:60323450-60323469 | None:intergenic | 40.0% |
| ! | CAAACTCGCTCTTTAAGAGT+AGG | + | chr3_2:60323466-60323485 | None:intergenic | 40.0% |
| ! | CGAGTTTGCGAGTTACATTT+TGG | - | chr3_2:60323478-60323497 | Msa0414650:intron | 40.0% |
| !! | TGTTGACTTGACTCCACTTT+GGG | - | chr3_2:60324070-60324089 | Msa0414650:intron | 40.0% |
| TATTAAGGGAAGACCCAAAG+TGG | + | chr3_2:60324086-60324105 | None:intergenic | 40.0% | |
| !! | GTTGAAGGCATTGCAAAGAA+GGG | + | chr3_2:60324109-60324128 | None:intergenic | 40.0% |
| !! | AGTTGAAGGCATTGCAAAGA+AGG | + | chr3_2:60324110-60324129 | None:intergenic | 40.0% |
| TAGCAGTCCAGGATTTACAA+AGG | + | chr3_2:60324387-60324406 | None:intergenic | 40.0% | |
| ! | GAAGATATCGTTTGGAACGA+TGG | - | chr3_2:60324421-60324440 | Msa0414650:intron | 40.0% |
| AGCTTGAACATTGGAAGAAG+TGG | + | chr3_2:60324512-60324531 | None:intergenic | 40.0% | |
| ! | TTTTCCCCACTATCAACTGA+TGG | - | chr3_2:60324793-60324812 | Msa0414650:CDS | 40.0% |
| TTTCCCCACTATCAACTGAT+GGG | - | chr3_2:60324794-60324813 | Msa0414650:CDS | 40.0% | |
| AGTCTCCACTAAAATCCGTT+GGG | + | chr3_2:60324904-60324923 | None:intergenic | 40.0% | |
| AAGTCTCCACTAAAATCCGT+TGG | + | chr3_2:60324905-60324924 | None:intergenic | 40.0% | |
| ! | CCCAACCACGATTTCTAAAA+TGG | + | chr3_2:60324933-60324952 | None:intergenic | 40.0% |
| ! | CAATCTCGCTAAGTCAGTTT+TGG | + | chr3_2:60324970-60324989 | None:intergenic | 40.0% |
| TATTACGGTGTGATAAGTGG+GGG | + | chr3_2:60324993-60325012 | None:intergenic | 40.0% | |
| AGGTCATTGTTTATGCGAGA+AGG | + | chr3_2:60325232-60325251 | None:intergenic | 40.0% | |
| !! | GTGAAAAGTACTTGAGGAGT+AGG | - | chr3_2:60325395-60325414 | Msa0414650:CDS | 40.0% |
| !! | GAAAAGTACTTGAGGAGTAG+GGG | - | chr3_2:60325397-60325416 | Msa0414650:CDS | 40.0% |
| ! | GTGTTTGAGATAGTAGTGGA+AGG | - | chr3_2:60325470-60325489 | Msa0414650:intron | 40.0% |
| GATGGACAAAACAATTTGGG+TGG | + | chr3_2:60325678-60325697 | None:intergenic | 40.0% | |
| AACTAGAGCAACTCTGTAGA+TGG | + | chr3_2:60325696-60325715 | None:intergenic | 40.0% | |
| AGACTATAGCAAGAAGGTCA+GGG | + | chr3_2:60325844-60325863 | None:intergenic | 40.0% | |
| AAGACTATAGCAAGAAGGTC+AGG | + | chr3_2:60325845-60325864 | None:intergenic | 40.0% | |
| TGCAGAAGACTATAGCAAGA+AGG | + | chr3_2:60325850-60325869 | None:intergenic | 40.0% | |
| GTATCTAGGCTTCTCTTTCT+AGG | - | chr3_2:60326010-60326029 | Msa0414650:CDS | 40.0% | |
| AATCAACGGAGTCGATAGAT+TGG | + | chr3_2:60326096-60326115 | None:intergenic | 40.0% | |
| !!! | TCGACTCCGTTGATTTTTAC+TGG | - | chr3_2:60326101-60326120 | Msa0414650:CDS | 40.0% |
| CCATGGCCAGTAAAAATCAA+CGG | + | chr3_2:60326110-60326129 | None:intergenic | 40.0% | |
| ! | ATTTTTACTGGCCATGGTCT+CGG | - | chr3_2:60326113-60326132 | Msa0414650:CDS | 40.0% |
| GAACCAAATGTGATGCAAAG+TGG | + | chr3_2:60326203-60326222 | None:intergenic | 40.0% | |
| AATCTCCTATCACCAACAAG+GGG | + | chr3_2:60326227-60326246 | None:intergenic | 40.0% | |
| CAATCTCCTATCACCAACAA+GGG | + | chr3_2:60326228-60326247 | None:intergenic | 40.0% | |
| TAATGAAGAGCCTTGGAAGT+GGG | + | chr3_2:60321558-60321577 | None:intergenic | 40.0% | |
| ! | ATGCTTAGGTTTTTCCACTC+AGG | - | chr3_2:60326523-60326542 | Msa0414650:intron | 40.0% |
| AATAAGGATTCACTGGCAAC+TGG | - | chr3_2:60326560-60326579 | Msa0414650:intron | 40.0% | |
| !! | CTGGTATTAGTTTGCAGTTG+CGG | - | chr3_2:60326579-60326598 | Msa0414650:intron | 40.0% |
| !! | TGGTATTAGTTTGCAGTTGC+GGG | - | chr3_2:60326580-60326599 | Msa0414650:intron | 40.0% |
| GTCGAAGCTTGTAGGATAAT+TGG | - | chr3_2:60326778-60326797 | Msa0414650:intron | 40.0% | |
| CGAAGCTTGTAGGATAATTG+GGG | - | chr3_2:60326780-60326799 | Msa0414650:intron | 40.0% | |
| ! | GAATGACGTGAAGGTACATA+TGG | - | chr3_2:60327062-60327081 | Msa0414650:intron | 40.0% |
| TACATATGGCCCAACTTGAA+TGG | - | chr3_2:60327076-60327095 | Msa0414650:intron | 40.0% | |
| CTACAAAAACATGAGCTCAC+TGG | - | chr3_2:60327143-60327162 | Msa0414650:intron | 40.0% | |
| TATGGAACTCAGCAACATCA+CGG | + | chr3_2:60327173-60327192 | None:intergenic | 40.0% | |
| CACCATTTACTGGGAGAAAA+TGG | - | chr3_2:60327200-60327219 | Msa0414650:intron | 40.0% | |
| ! | AAAGCTGCACCTTCTTTTTG+AGG | + | chr3_2:60322459-60322478 | None:intergenic | 40.0% |
| ! | TTTCGTACCCGTTGGTTATA+TGG | - | chr3_2:60322477-60322496 | Msa0414650:intron | 40.0% |
| TAGTCCCACCATATAACCAA+CGG | + | chr3_2:60327275-60327294 | None:intergenic | 40.0% | |
| ! | TATATGGTGGGACTACTTAC+AGG | - | chr3_2:60327280-60327299 | Msa0414650:intron | 40.0% |
| GCTGAATACTACAGAAAAGG+CGG | - | chr3_2:60327327-60327346 | Msa0414650:intron | 40.0% | |
| GTCGAAACACTTCAAACAGT+TGG | - | chr3_2:60327374-60327393 | Msa0414650:intron | 40.0% | |
| GAAACACTTCAAACAGTTGG+AGG | - | chr3_2:60327377-60327396 | Msa0414650:intron | 40.0% | |
| ACTTCAAACAGTTGGAGGAA+TGG | - | chr3_2:60327382-60327401 | Msa0414650:intron | 40.0% | |
| AAAGCAGCTATATTCGTTGG+TGG | - | chr3_2:60327640-60327659 | Msa0414650:CDS | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr3_2:60327997-60328016 | None:intergenic | 40.0% | |
| ! | CCATGATTTGCAAAGGATGG+TGG | + | chr3_2:60319754-60319773 | None:intergenic | 45.0% |
| CCACCATCCTTTGCAAATCA+TGG | - | chr3_2:60319751-60319770 | Msa0414650:three_prime_UTR | 45.0% | |
| ACTCTTTCGCGAAAATCACC+AGG | - | chr3_2:60319995-60320014 | Msa0414650:CDS | 45.0% | |
| CATACTCTGTCCACACACTA+AGG | - | chr3_2:60320365-60320384 | Msa0414650:CDS | 45.0% | |
| GAGCATTTGTTTCATCAGCC+TGG | - | chr3_2:60320867-60320886 | Msa0414650:intron | 45.0% | |
| TGGGTGGCAAAATAGGAATG+CGG | + | chr3_2:60320913-60320932 | None:intergenic | 45.0% | |
| ATGAGCTTGGGTGGCAAAAT+AGG | + | chr3_2:60320920-60320939 | None:intergenic | 45.0% | |
| GTGCATCTGCTTCATTGCTT+TGG | - | chr3_2:60321016-60321035 | Msa0414650:CDS | 45.0% | |
| CTAGAGCAAGAAAGGAGGTT+AGG | + | chr3_2:60321082-60321101 | None:intergenic | 45.0% | |
| GAAGACTAGAGCAAGAAAGG+AGG | + | chr3_2:60321087-60321106 | None:intergenic | 45.0% | |
| GCAGAAGACTAGAGCAAGAA+AGG | + | chr3_2:60321090-60321109 | None:intergenic | 45.0% | |
| CCATGTCCAGTAACAATCAG+CGG | + | chr3_2:60321352-60321371 | None:intergenic | 45.0% | |
| ! | ACCTTTGGTTCACTGCTTGT+TGG | - | chr3_2:60321454-60321473 | Msa0414650:CDS | 45.0% |
| ACCAACAAGCAGTGAACCAA+AGG | + | chr3_2:60321458-60321477 | None:intergenic | 45.0% | |
| GTAATGAAGAGCCTTGGAAG+TGG | + | chr3_2:60321559-60321578 | None:intergenic | 45.0% | |
| CGATCTGTAATGAAGAGCCT+TGG | + | chr3_2:60321565-60321584 | None:intergenic | 45.0% | |
| ! | ACCAGTACCTACATGCCTTT+TGG | - | chr3_2:60321586-60321605 | Msa0414650:CDS | 45.0% |
| ! | TCCAAAAGGCATGTAGGTAC+TGG | + | chr3_2:60321590-60321609 | None:intergenic | 45.0% |
| ! | GTCAAGTTTTCAGCTTGAGC+CGG | + | chr3_2:60321778-60321797 | None:intergenic | 45.0% |
| TTGACACCACATATGCAGGT+AGG | - | chr3_2:60321850-60321869 | Msa0414650:intron | 45.0% | |
| AACCGTTCCACTTACAAGCT+CGG | + | chr3_2:60321960-60321979 | None:intergenic | 45.0% | |
| GCTTGTAAGTGGAACGGTTA+AGG | - | chr3_2:60321961-60321980 | Msa0414650:intron | 45.0% | |
| TAGTCCCTGCGTATAACCAA+CGG | + | chr3_2:60322488-60322507 | None:intergenic | 45.0% | |
| TATACGCAGGGACTACTTAC+AGG | - | chr3_2:60322493-60322512 | Msa0414650:intron | 45.0% | |
| AGGGACTACTTACAGGAGAA+TGG | - | chr3_2:60322500-60322519 | Msa0414650:intron | 45.0% | |
| ACAGTTGGAGGAGTGGTTAT+TGG | - | chr3_2:60322602-60322621 | Msa0414650:intron | 45.0% | |
| ! | CTTTTGGGCACATGTTGAAG+AGG | - | chr3_2:60322707-60322726 | Msa0414650:intron | 45.0% |
| ! | TCTTTTATGCGGAGAGGTGA+AGG | - | chr3_2:60322734-60322753 | Msa0414650:intron | 45.0% |
| GGTTGTCAAAGAGAAAGACG+AGG | - | chr3_2:60322755-60322774 | Msa0414650:intron | 45.0% | |
| ! | AAGAGAAAGACGAGGCACTA+AGG | - | chr3_2:60322763-60322782 | Msa0414650:intron | 45.0% |
| AGTGTCCCCTGAGATATTTC+TGG | - | chr3_2:60322836-60322855 | Msa0414650:intron | 45.0% | |
| TCGTGCCAGAAATATCTCAG+GGG | + | chr3_2:60322844-60322863 | None:intergenic | 45.0% | |
| CTTCGTGCCAGAAATATCTC+AGG | + | chr3_2:60322846-60322865 | None:intergenic | 45.0% | |
| !! | GTGTTGACTTGACTCCACTT+TGG | - | chr3_2:60324069-60324088 | Msa0414650:intron | 45.0% |
| CTGTGTCATGCTGAAGTTCT+TGG | + | chr3_2:60324176-60324195 | None:intergenic | 45.0% | |
| ATCAGATGAGATAGCAGTCC+AGG | + | chr3_2:60324398-60324417 | None:intergenic | 45.0% | |
| TTCCCCACTATCAACTGATG+GGG | - | chr3_2:60324795-60324814 | Msa0414650:CDS | 45.0% | |
| TCCTCACACCCAACACTATT+GGG | - | chr3_2:60324834-60324853 | Msa0414650:CDS | 45.0% | |
| ACACCAAGCCCAATAGTGTT+GGG | + | chr3_2:60324845-60324864 | None:intergenic | 45.0% | |
| AACACCAAGCCCAATAGTGT+TGG | + | chr3_2:60324846-60324865 | None:intergenic | 45.0% | |
| !! | ACACTATTGGGCTTGGTGTT+TGG | - | chr3_2:60324846-60324865 | Msa0414650:CDS | 45.0% |
| !! | TCTCGCTAAGTCAGTTTTGG+CGG | + | chr3_2:60324967-60324986 | None:intergenic | 45.0% |
| CTACAGAGTTGCTCTAGTTG+AGG | - | chr3_2:60325697-60325716 | Msa0414650:intron | 45.0% | |
| GTGCATCTGCATCATTGCTT+CGG | - | chr3_2:60325779-60325798 | Msa0414650:CDS | 45.0% | |
| CGGTATAATACAGGGAAGCA+AGG | + | chr3_2:60325973-60325992 | None:intergenic | 45.0% | |
| !!! | CCGTTGATTTTTACTGGCCA+TGG | - | chr3_2:60326107-60326126 | Msa0414650:CDS | 45.0% |
| CGTCCACTTTGCATCACATT+TGG | - | chr3_2:60326197-60326216 | Msa0414650:CDS | 45.0% | |
| ! | ACATTTGGTTCACCCCTTGT+TGG | - | chr3_2:60326212-60326231 | Msa0414650:CDS | 45.0% |
| GCAATCTCCTATCACCAACA+AGG | + | chr3_2:60326229-60326248 | None:intergenic | 45.0% | |
| GTAATGAAGAGCCTTGGAAG+TGG | + | chr3_2:60321559-60321578 | None:intergenic | 45.0% | |
| CGATCTGTAATGAAGAGCCT+TGG | + | chr3_2:60321565-60321584 | None:intergenic | 45.0% | |
| ! | AGTCATGTTTTCAGCCTGAG+TGG | + | chr3_2:60326540-60326559 | None:intergenic | 45.0% |
| CTACAAGCTTCGACATTGTG+TGG | + | chr3_2:60326772-60326791 | None:intergenic | 45.0% | |
| CACACAATGTCGAAGCTTGT+AGG | - | chr3_2:60326770-60326789 | Msa0414650:intron | 45.0% | |
| ! | ATTAACTTGGCAGCAGCAAC+AGG | - | chr3_2:60326942-60326961 | Msa0414650:intron | 45.0% |
| ! | GTACCCGTTGGTTATATGGT+GGG | - | chr3_2:60327268-60327287 | Msa0414650:intron | 45.0% |
| AGTCCCACCATATAACCAAC+GGG | + | chr3_2:60327274-60327293 | None:intergenic | 45.0% | |
| TGGGACTACTTACAGGAGAA+TGG | - | chr3_2:60327287-60327306 | Msa0414650:intron | 45.0% | |
| ACAGTTGGAGGAATGGTTGA+TGG | - | chr3_2:60327389-60327408 | Msa0414650:intron | 45.0% | |
| CAGTTGGAGGAATGGTTGAT+GGG | - | chr3_2:60327390-60327409 | Msa0414650:intron | 45.0% | |
| ! | CTTTTGGGCACATGTTGAAG+AGG | - | chr3_2:60322707-60322726 | Msa0414650:intron | 45.0% |
| CGCAAAGCAGCTATATTCGT+TGG | - | chr3_2:60327637-60327656 | Msa0414650:CDS | 45.0% | |
| !!! | AATAATTTTTAAAATAATCA+AGG | + | chr3_2:60321199-60321218 | None:intergenic | 5.0% |
| !!! | TTTTTTATATAAAAAAATCT+AGG | + | chr3_2:60323588-60323607 | None:intergenic | 5.0% |
| !! | AAAATTAAAACAAAAATTAA+GGG | - | chr3_2:60325140-60325159 | Msa0414650:CDS | 5.0% |
| CTAAGGCCCTGTTTGGATGA+AGG | - | chr3_2:60320382-60320401 | Msa0414650:CDS | 50.0% | |
| GCTCGCGTCAAAAAGAGATG+AGG | + | chr3_2:60320437-60320456 | None:intergenic | 50.0% | |
| GAGCTAGAAATGAGCTTGGG+TGG | + | chr3_2:60320929-60320948 | None:intergenic | 50.0% | |
| AATCAGCGGAGTCTGTGGAT+TGG | + | chr3_2:60321338-60321357 | None:intergenic | 50.0% | |
| GTAACAATCAGCGGAGTCTG+TGG | + | chr3_2:60321343-60321362 | None:intergenic | 50.0% | |
| ! | CAGACTCCGCTGATTGTTAC+TGG | - | chr3_2:60321343-60321362 | Msa0414650:CDS | 50.0% |
| ! | CCGCTGATTGTTACTGGACA+TGG | - | chr3_2:60321349-60321368 | Msa0414650:CDS | 50.0% |
| AACCAAAGGTGATGCAGAGC+GGG | + | chr3_2:60321444-60321463 | None:intergenic | 50.0% | |
| GAACCAAAGGTGATGCAGAG+CGG | + | chr3_2:60321445-60321464 | None:intergenic | 50.0% | |
| !! | GTTCACTGCTTGTTGGTGAC+AGG | - | chr3_2:60321461-60321480 | Msa0414650:CDS | 50.0% |
| CACACAAAGACCCACTTCCA+AGG | - | chr3_2:60321545-60321564 | Msa0414650:CDS | 50.0% | |
| !! | AGCTCGGTGTCTGTTCTCAA+TGG | + | chr3_2:60321944-60321963 | None:intergenic | 50.0% |
| ACAGACACCGAGCTTGTAAG+TGG | - | chr3_2:60321950-60321969 | Msa0414650:intron | 50.0% | |
| CACCGAGCTTGTAAGTGGAA+CGG | - | chr3_2:60321955-60321974 | Msa0414650:intron | 50.0% | |
| ! | GTACCCGTTGGTTATACGCA+GGG | - | chr3_2:60322481-60322500 | Msa0414650:intron | 50.0% |
| AGTCCCTGCGTATAACCAAC+GGG | + | chr3_2:60322487-60322506 | None:intergenic | 50.0% | |
| CAGCACACACAGCAAGAATG+TGG | - | chr3_2:60322659-60322678 | Msa0414650:intron | 50.0% | |
| ! | GGCTCTTCTTTTATGCGGAG+AGG | - | chr3_2:60322728-60322747 | Msa0414650:intron | 50.0% |
| CACGAAGCAGCTACATTCGT+TGG | - | chr3_2:60322859-60322878 | Msa0414650:intron | 50.0% | |
| GAAGCAGCTACATTCGTTGG+TGG | - | chr3_2:60322862-60322881 | Msa0414650:intron | 50.0% | |
| !! | TCACCTCACACGGTTTTGTG+GGG | + | chr3_2:60324770-60324789 | None:intergenic | 50.0% |
| !! | CTCACCTCACACGGTTTTGT+GGG | + | chr3_2:60324771-60324790 | None:intergenic | 50.0% |
| GGGAAAATCCTCACCTCACA+CGG | + | chr3_2:60324780-60324799 | None:intergenic | 50.0% | |
| TCCCCACTATCAACTGATGG+GGG | - | chr3_2:60324796-60324815 | Msa0414650:CDS | 50.0% | |
| !! | TCCCCCATCAGTTGATAGTG+GGG | + | chr3_2:60324800-60324819 | None:intergenic | 50.0% |
| !! | GTCCCCCATCAGTTGATAGT+GGG | + | chr3_2:60324801-60324820 | None:intergenic | 50.0% |
| !! | AGTCCCCCATCAGTTGATAG+TGG | + | chr3_2:60324802-60324821 | None:intergenic | 50.0% |
| ! | CAATAGTGTTGGGTGTGAGG+AGG | + | chr3_2:60324835-60324854 | None:intergenic | 50.0% |
| CTCCTCACACCCAACACTAT+TGG | - | chr3_2:60324833-60324852 | Msa0414650:CDS | 50.0% | |
| ACACCCAACACTATTGGGCT+TGG | - | chr3_2:60324839-60324858 | Msa0414650:CDS | 50.0% | |
| !! | CTCGCTAAGTCAGTTTTGGC+GGG | + | chr3_2:60324966-60324985 | None:intergenic | 50.0% |
| TGTCATCACTCACACTGCTG+AGG | - | chr3_2:60325614-60325633 | Msa0414650:intron | 50.0% | |
| CTCTAGTTGAGGAGTTGCGT+AGG | - | chr3_2:60325708-60325727 | Msa0414650:intron | 50.0% | |
| !! | GTTCACCCCTTGTTGGTGAT+AGG | - | chr3_2:60326219-60326238 | Msa0414650:CDS | 50.0% |
| CACACAAAGACCCACTTCCA+AGG | - | chr3_2:60321545-60321564 | Msa0414650:CDS | 50.0% | |
| CTTGGAAATTCTCGTGGCGT+TGG | - | chr3_2:60326421-60326440 | Msa0414650:intron | 50.0% | |
| AGTTTGCAGTTGCGGGAACT+AGG | - | chr3_2:60326587-60326606 | Msa0414650:intron | 50.0% | |
| GTTTGCAGTTGCGGGAACTA+GGG | - | chr3_2:60326588-60326607 | Msa0414650:intron | 50.0% | |
| TCGACATTGTGTGGCAGCTA+TGG | + | chr3_2:60326763-60326782 | None:intergenic | 50.0% | |
| ! | CGTACCCGTTGGTTATATGG+TGG | - | chr3_2:60327267-60327286 | Msa0414650:intron | 50.0% |
| CCAAACAGGGCCTTAGTGTG+TGG | + | chr3_2:60320378-60320397 | None:intergenic | 55.0% | |
| CCACACACTAAGGCCCTGTT+TGG | - | chr3_2:60320375-60320394 | Msa0414650:CDS | 55.0% | |
| GTTACTGGACATGGTCTCGG+AGG | - | chr3_2:60321358-60321377 | Msa0414650:CDS | 55.0% | |
| ! | GTGCAGCTTTTCGTACCCGT+TGG | - | chr3_2:60322469-60322488 | Msa0414650:intron | 55.0% |
| ! | CGTACCCGTTGGTTATACGC+AGG | - | chr3_2:60322480-60322499 | Msa0414650:intron | 55.0% |
| CAACCCCACAAAACCGTGTG+AGG | - | chr3_2:60324764-60324783 | Msa0414650:CDS | 55.0% | |
| ! | CCTCACCTCACACGGTTTTG+TGG | + | chr3_2:60324772-60324791 | None:intergenic | 55.0% |
| CCACAAAACCGTGTGAGGTG+AGG | - | chr3_2:60324769-60324788 | Msa0414650:CDS | 55.0% | |
| ! | GCCCAATAGTGTTGGGTGTG+AGG | + | chr3_2:60324838-60324857 | None:intergenic | 55.0% |
| CACTTGATGCTCCGAGACCA+TGG | + | chr3_2:60326127-60326146 | None:intergenic | 55.0% | |
| AGGGTTGACGCCACATATGC+AGG | - | chr3_2:60326607-60326626 | Msa0414650:intron | 55.0% | |
| ! | GTGCAGCTTTTCGTACCCGT+TGG | - | chr3_2:60322469-60322488 | Msa0414650:intron | 55.0% |
| CGCCCGCTCTGCATCACCTT+TGG | - | chr3_2:60321439-60321458 | Msa0414650:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 60319398 | 60328240 | 60319398 | ID=Msa0414650;Name=Msa0414650 |
| chr3_2 | mRNA | 60319398 | 60328240 | 60319398 | ID=Msa0414650-mRNA-1;Parent=Msa0414650;Name=Msa0414650-mRNA-1;_AED=0.18;_eAED=0.18;_QI=125|0.75|0.77|1|0.75|0.55|9|275|1148 |
| chr3_2 | exon | 60319398 | 60319532 | 60319398 | ID=Msa0414650-mRNA-1:exon:12607;Parent=Msa0414650-mRNA-1 |
| chr3_2 | exon | 60319725 | 60320683 | 60319725 | ID=Msa0414650-mRNA-1:exon:12606;Parent=Msa0414650-mRNA-1 |
| chr3_2 | exon | 60321010 | 60321606 | 60321010 | ID=Msa0414650-mRNA-1:exon:12605;Parent=Msa0414650-mRNA-1 |
| chr3_2 | exon | 60322957 | 60323302 | 60322957 | ID=Msa0414650-mRNA-1:exon:12604;Parent=Msa0414650-mRNA-1 |
| chr3_2 | exon | 60324674 | 60325467 | 60324674 | ID=Msa0414650-mRNA-1:exon:12603;Parent=Msa0414650-mRNA-1 |
| chr3_2 | exon | 60325771 | 60326313 | 60325771 | ID=Msa0414650-mRNA-1:exon:12602;Parent=Msa0414650-mRNA-1 |
| chr3_2 | exon | 60327598 | 60327928 | 60327598 | ID=Msa0414650-mRNA-1:exon:12601;Parent=Msa0414650-mRNA-1 |
| chr3_2 | exon | 60328064 | 60328106 | 60328064 | ID=Msa0414650-mRNA-1:exon:12600;Parent=Msa0414650-mRNA-1 |
| chr3_2 | exon | 60328142 | 60328240 | 60328142 | ID=Msa0414650-mRNA-1:exon:12599;Parent=Msa0414650-mRNA-1 |
| chr3_2 | five_prime_UTR | 60328142 | 60328240 | 60328142 | ID=Msa0414650-mRNA-1:five_prime_utr;Parent=Msa0414650-mRNA-1 |
| chr3_2 | five_prime_UTR | 60328081 | 60328106 | 60328081 | ID=Msa0414650-mRNA-1:five_prime_utr;Parent=Msa0414650-mRNA-1 |
| chr3_2 | CDS | 60328064 | 60328080 | 60328064 | ID=Msa0414650-mRNA-1:cds;Parent=Msa0414650-mRNA-1 |
| chr3_2 | CDS | 60327598 | 60327928 | 60327598 | ID=Msa0414650-mRNA-1:cds;Parent=Msa0414650-mRNA-1 |
| chr3_2 | CDS | 60325771 | 60326313 | 60325771 | ID=Msa0414650-mRNA-1:cds;Parent=Msa0414650-mRNA-1 |
| chr3_2 | CDS | 60324674 | 60325467 | 60324674 | ID=Msa0414650-mRNA-1:cds;Parent=Msa0414650-mRNA-1 |
| chr3_2 | CDS | 60322957 | 60323302 | 60322957 | ID=Msa0414650-mRNA-1:cds;Parent=Msa0414650-mRNA-1 |
| chr3_2 | CDS | 60321010 | 60321606 | 60321010 | ID=Msa0414650-mRNA-1:cds;Parent=Msa0414650-mRNA-1 |
| chr3_2 | CDS | 60319865 | 60320683 | 60319865 | ID=Msa0414650-mRNA-1:cds;Parent=Msa0414650-mRNA-1 |
| chr3_2 | three_prime_UTR | 60319725 | 60319864 | 60319725 | ID=Msa0414650-mRNA-1:three_prime_utr;Parent=Msa0414650-mRNA-1 |
| chr3_2 | three_prime_UTR | 60319398 | 60319532 | 60319398 | ID=Msa0414650-mRNA-1:three_prime_utr;Parent=Msa0414650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
