Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506300 | XP_024635249.1 | 76.117 | 582 | 123 | 6 | 534 | 1110 | 2 | 572 | 0.0 | 888 |
| Msa0506300 | XP_024635249.1 | 84.683 | 568 | 60 | 3 | 1 | 542 | 1 | 567 | 0.0 | 976 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506300 | sp|Q4F883|SG101_ARATH | 35.252 | 556 | 288 | 18 | 10 | 531 | 9 | 526 | 6.62e-88 | 297 |
| Msa0506300 | sp|Q4F883|SG101_ARATH | 33.675 | 585 | 306 | 17 | 542 | 1103 | 9 | 534 | 9.20e-85 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506300 | A0A072V8I6 | 76.460 | 582 | 124 | 5 | 534 | 1110 | 2 | 575 | 0.0 | 897 |
| Msa0506300 | A0A072V8I6 | 84.238 | 571 | 60 | 3 | 1 | 542 | 1 | 570 | 0.0 | 974 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007280 | Msa0506300 | 0.841317 | 5.114680e-58 | -8.615850e-47 |
| Msa0054240 | Msa0506300 | 0.813516 | 2.460958e-51 | -8.615850e-47 |
| Msa0054310 | Msa0506300 | 0.825972 | 3.502056e-54 | -8.615850e-47 |
| Msa0054330 | Msa0506300 | 0.809540 | 1.798705e-50 | -8.615850e-47 |
| Msa0055740 | Msa0506300 | 0.806918 | 6.512658e-50 | -8.615850e-47 |
| Msa0100070 | Msa0506300 | 0.806860 | 6.700152e-50 | -8.615850e-47 |
| Msa0131410 | Msa0506300 | 0.803486 | 3.407527e-49 | -8.615850e-47 |
| Msa0131420 | Msa0506300 | 0.821506 | 3.894208e-53 | -8.615850e-47 |
| Msa0141230 | Msa0506300 | 0.802744 | 4.851951e-49 | -8.615850e-47 |
| Msa0148720 | Msa0506300 | 0.822533 | 2.251993e-53 | -8.615850e-47 |
| Msa0153450 | Msa0506300 | 0.853740 | 1.957007e-61 | -8.615850e-47 |
| Msa0202750 | Msa0506300 | 0.803984 | 2.684681e-49 | -8.615850e-47 |
| Msa0212310 | Msa0506300 | 0.818417 | 1.981521e-52 | -8.615850e-47 |
| Msa0377800 | Msa0506300 | 0.848395 | 6.297763e-60 | -8.615850e-47 |
| Msa0414650 | Msa0506300 | 0.804618 | 1.981360e-49 | -8.615850e-47 |
| Msa0419670 | Msa0506300 | 0.827447 | 1.556825e-54 | -8.615850e-47 |
| Msa0426600 | Msa0506300 | 0.845706 | 3.434586e-59 | -8.615850e-47 |
| Msa0459560 | Msa0506300 | 0.862430 | 5.098273e-64 | -8.615850e-47 |
| Msa0472910 | Msa0506300 | 0.841403 | 4.853996e-58 | -8.615850e-47 |
| Msa0245880 | Msa0506300 | 0.821135 | 4.742146e-53 | -8.615850e-47 |
| Msa0506300 | Msa0517570 | 0.844870 | 5.782616e-59 | -8.615850e-47 |
| Msa0506300 | Msa0607180 | 0.804939 | 1.698116e-49 | -8.615850e-47 |
| Msa0506300 | Msa0647360 | 0.812918 | 3.329631e-51 | -8.615850e-47 |
| Msa0506300 | Msa0696740 | 0.802193 | 6.300184e-49 | -8.615850e-47 |
| Msa0506300 | Msa0936530 | 0.835015 | 2.145289e-56 | -8.615850e-47 |
| Msa0506300 | Msa0946680 | 0.812479 | 4.151998e-51 | -8.615850e-47 |
| Msa0506300 | Msa0972770 | 0.822599 | 2.173217e-53 | -8.615850e-47 |
| Msa0506300 | Msa0973520 | 0.800838 | 1.194198e-48 | -8.615850e-47 |
| Msa0506300 | Msa0976640 | 0.803837 | 2.880685e-49 | -8.615850e-47 |
| Msa0506300 | Msa0996130 | 0.817851 | 2.661062e-52 | -8.615850e-47 |
| Msa0506300 | Msa1029090 | 0.818699 | 1.710699e-52 | -8.615850e-47 |
| Msa0506300 | Msa1074580 | 0.808340 | 3.250386e-50 | -8.615850e-47 |
| Msa0506300 | Msa1111750 | 0.805708 | 1.171483e-49 | -8.615850e-47 |
| Msa0506300 | Msa1121660 | 0.831320 | 1.784996e-55 | -8.615850e-47 |
| Msa0506300 | Msa1154080 | 0.806660 | 7.383975e-50 | -8.615850e-47 |
| Msa0506300 | Msa1156180 | 0.840045 | 1.101207e-57 | -8.615850e-47 |
| Msa0506300 | Msa1201200 | 0.823613 | 1.260622e-53 | -8.615850e-47 |
| Msa0506300 | Msa1252960 | 0.806371 | 8.498422e-50 | -8.615850e-47 |
| Msa0506300 | Msa1458510 | 0.823640 | 1.242631e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506300 | MtrunA17_Chr3g0107671 | 84.238 | 571 | 60 | 3 | 1 | 542 | 1 | 570 | 0.0 | 974 |
| Msa0506300 | MtrunA17_Chr3g0107671 | 76.460 | 582 | 124 | 5 | 534 | 1110 | 2 | 575 | 0.0 | 897 |
| Msa0506300 | MtrunA17_Chr6g0451531 | 64.777 | 582 | 186 | 10 | 537 | 1110 | 7 | 577 | 0.0 | 720 |
| Msa0506300 | MtrunA17_Chr6g0451531 | 63.986 | 572 | 166 | 9 | 5 | 542 | 7 | 572 | 0.0 | 699 |
| Msa0506300 | MtrunA17_Chr6g0451541 | 62.651 | 581 | 201 | 7 | 537 | 1110 | 7 | 578 | 0.0 | 708 |
| Msa0506300 | MtrunA17_Chr6g0451541 | 60.908 | 573 | 183 | 8 | 5 | 542 | 7 | 573 | 0.0 | 665 |
| Msa0506300 | MtrunA17_Chr6g0451561 | 63.220 | 590 | 188 | 10 | 534 | 1110 | 2 | 575 | 0.0 | 702 |
| Msa0506300 | MtrunA17_Chr6g0451561 | 58.632 | 585 | 184 | 12 | 1 | 542 | 1 | 570 | 0.0 | 628 |
| Msa0506300 | MtrunA17_Chr6g0451511 | 55.965 | 570 | 204 | 11 | 1 | 532 | 1 | 561 | 0.0 | 582 |
| Msa0506300 | MtrunA17_Chr6g0451511 | 54.889 | 583 | 242 | 10 | 537 | 1109 | 5 | 576 | 0.0 | 578 |
| Msa0506300 | MtrunA17_Chr3g0107661 | 89.340 | 197 | 21 | 0 | 534 | 730 | 2 | 198 | 1.56e-115 | 358 |
| Msa0506300 | MtrunA17_Chr3g0107661 | 75.758 | 198 | 42 | 3 | 1 | 192 | 1 | 198 | 1.21e-92 | 296 |
| Msa0506300 | MtrunA17_Chr3g0107651 | 87.770 | 139 | 14 | 1 | 814 | 952 | 1 | 136 | 8.72e-79 | 254 |
| Msa0506300 | MtrunA17_Chr3g0107651 | 63.971 | 136 | 27 | 1 | 273 | 386 | 1 | 136 | 5.77e-52 | 179 |
| Msa0506300 | MtrunA17_Chr8g0384621 | 26.971 | 482 | 286 | 16 | 664 | 1081 | 132 | 611 | 1.71e-36 | 147 |
| Msa0506300 | MtrunA17_Chr8g0384621 | 24.040 | 495 | 259 | 18 | 126 | 518 | 132 | 611 | 1.52e-27 | 119 |
| Msa0506300 | MtrunA17_Chr3g0118251 | 27.042 | 355 | 202 | 14 | 746 | 1074 | 276 | 599 | 8.35e-23 | 104 |
| Msa0506300 | MtrunA17_Chr3g0118251 | 26.761 | 355 | 181 | 17 | 205 | 511 | 276 | 599 | 2.96e-20 | 96.7 |
| Msa0506300 | MtrunA17_Chr3g0118541 | 25.857 | 321 | 172 | 12 | 205 | 485 | 287 | 581 | 7.54e-17 | 85.9 |
| Msa0506300 | MtrunA17_Chr3g0118541 | 26.171 | 363 | 206 | 17 | 746 | 1079 | 287 | 616 | 1.96e-14 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506300 | AT5G14930.2 | 35.252 | 556 | 288 | 18 | 10 | 531 | 9 | 526 | 6.73e-89 | 297 |
| Msa0506300 | AT5G14930.2 | 33.675 | 585 | 306 | 17 | 542 | 1103 | 9 | 534 | 9.35e-86 | 288 |
| Msa0506300 | AT3G52430.1 | 27.880 | 434 | 272 | 14 | 664 | 1081 | 112 | 520 | 4.10e-38 | 151 |
| Msa0506300 | AT3G52430.1 | 24.706 | 425 | 272 | 12 | 126 | 518 | 112 | 520 | 2.35e-30 | 127 |
| Msa0506300 | AT5G14930.3 | 35.242 | 227 | 120 | 7 | 10 | 219 | 9 | 225 | 7.76e-30 | 119 |
| Msa0506300 | AT5G14930.3 | 34.211 | 228 | 130 | 4 | 542 | 760 | 9 | 225 | 2.73e-27 | 112 |
| Msa0506300 | AT3G48080.1 | 25.496 | 353 | 205 | 15 | 205 | 512 | 265 | 604 | 1.04e-11 | 69.7 |
Find 204 sgRNAs with CRISPR-Local
Find 555 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATGTCATTCAATTTCT+TGG | 0.175279 | 3_4:+52600472 | None:intergenic |
| GAATTTGAGGAGTATGTTTA+TGG | 0.181755 | 3_4:-52599942 | Msa0506300:CDS |
| ACCACCTTCACTGTAGTATT+TGG | 0.184967 | 3_4:+52600196 | None:intergenic |
| CTATATCACGTAGTTCTATT+TGG | 0.193281 | 3_4:-52596572 | Msa0506300:CDS |
| TACGGTTTGTAGAAACTTAT+TGG | 0.197065 | 3_4:-52594896 | Msa0506300:three_prime_UTR |
| CTTCACGTCATTCAATTTCT+TGG | 0.211999 | 3_4:+52595736 | Msa0506290:intron |
| GAACGAGTATAAAGCAATTA+AGG | 0.216540 | 3_4:-52595126 | Msa0506300:CDS |
| GAACTTGAATCTGTTGATTA+TGG | 0.222882 | 3_4:-52596354 | Msa0506300:CDS |
| CCATATCACGTAGTTCTATT+TGG | 0.224477 | 3_4:-52601208 | Msa0506300:CDS |
| TGACTATAGATTCTTGCTTT+TGG | 0.226808 | 3_4:-52600046 | Msa0506300:CDS |
| TGACTACAGATTCTTGCTTT+TGG | 0.265156 | 3_4:-52595319 | Msa0506300:CDS |
| GCAACTAAGAATCAACAAAT+AGG | 0.266910 | 3_4:-52595680 | Msa0506300:CDS |
| AAGACTATGTTCATAATAAA+AGG | 0.271277 | 3_4:-52595436 | Msa0506300:CDS |
| TTCCAGTGTTCAAGCTGATT+TGG | 0.274780 | 3_4:-52602781 | Msa0506300:CDS |
| GAACTCGAATCTGTTGATTA+TGG | 0.275822 | 3_4:-52600999 | Msa0506300:CDS |
| ACAGTTGGAGGAGTGGTTAT+TGG | 0.276000 | 3_4:-52600135 | Msa0506300:CDS |
| ACCAGTAATTACATGCCTTT+TGG | 0.278707 | 3_4:-52596474 | Msa0506300:CDS |
| TTCCAAATTTCTCTGTTAAC+AGG | 0.278809 | 3_4:-52598156 | Msa0506300:CDS |
| AGAATTTCCAAGATAGAATT+CGG | 0.286637 | 3_4:+52601056 | None:intergenic |
| CAGAGTCCATTGATTGTTAC+TGG | 0.288359 | 3_4:-52601362 | Msa0506300:CDS |
| TTTCGTACCCGTTGGTTATA+TGG | 0.289900 | 3_4:-52595524 | Msa0506300:CDS |
| GTCCTGTTAACAGAGAAATT+TGG | 0.290860 | 3_4:+52598154 | None:intergenic |
| AAAGAAATTGTTAGAATTTG+AGG | 0.296622 | 3_4:-52599955 | Msa0506300:CDS |
| TCCAAAAGGCATGTAATTAC+TGG | 0.303907 | 3_4:+52596473 | None:intergenic |
| ACCAGTATCTACATGCCTTT+TGG | 0.303945 | 3_4:-52601119 | Msa0506300:CDS |
| AGAATTTCCAAGATAGAATC+TGG | 0.305517 | 3_4:+52596411 | Msa0506290:CDS |
| ACGATGGTATTGATCTTTCT+TGG | 0.307765 | 3_4:-52598321 | Msa0506300:CDS |
| TGGTATTAGTTTGCAGTTGC+AGG | 0.313024 | 3_4:-52596241 | Msa0506300:CDS |
| CACCATCTACTGGGAGAAAA+TGG | 0.316081 | 3_4:-52595588 | Msa0506300:CDS |
| TATATCACGTAGTTCTATTT+GGG | 0.317373 | 3_4:-52596571 | Msa0506300:CDS |
| ATATCAGTTGCTAGTGAATC+TGG | 0.321829 | 3_4:+52600903 | None:intergenic |
| GGCTGAAAACATGACTAATA+AGG | 0.326531 | 3_4:-52596277 | Msa0506300:CDS |
| AAAGAAATTATTTGAATTTG+AGG | 0.327326 | 3_4:-52595228 | Msa0506300:CDS |
| TTTCGTACCCGTTGGTTATA+TGG | 0.328618 | 3_4:-52600260 | Msa0506300:CDS |
| TTGTACCTTGGAAACATCTT+TGG | 0.331477 | 3_4:-52594636 | Msa0506300:three_prime_UTR |
| CGCCCGCTCTGCATTACCTT+TGG | 0.333826 | 3_4:-52601266 | Msa0506300:CDS |
| CGAGAACCCGAATTCTATCT+TGG | 0.335853 | 3_4:-52601063 | Msa0506300:CDS |
| CCAAATAGAACTACGTGATA+TGG | 0.336582 | 3_4:+52601208 | Msa0506320:CDS |
| GGTTTCTTCTGCTGAACTTA+AGG | 0.337315 | 3_4:-52602760 | Msa0506300:CDS |
| TGGAAACTTGATAAAGAAAC+TGG | 0.339523 | 3_4:-52602837 | Msa0506300:CDS |
| TTACATAGAGAATACACTTC+AGG | 0.354520 | 3_4:+52595019 | Msa0506290:intron |
| TATATGGTGGGACTACTTAC+AGG | 0.360221 | 3_4:-52595508 | Msa0506300:CDS |
| GATAAAATGATATCTTCTTC+TGG | 0.362165 | 3_4:+52595762 | Msa0506290:intron |
| CCAACTTGAATGGTACAAAA+AGG | 0.362345 | 3_4:-52595702 | Msa0506300:CDS |
| CGTCCACTCTGCATCACATT+TGG | 0.372210 | 3_4:-52596630 | Msa0506300:CDS |
| AAAGCTGCACCTTCTCTTTG+TGG | 0.372497 | 3_4:+52600281 | None:intergenic |
| AGTTTCTTCAACTGAACTTA+AGG | 0.383974 | 3_4:-52598221 | Msa0506300:CDS |
| CTAGTATCCTTTGTAAATCA+TGG | 0.384350 | 3_4:-52598381 | Msa0506300:CDS |
| TTGGTATGTTTAACATGAAT+AGG | 0.385149 | 3_4:-52594851 | Msa0506300:three_prime_UTR |
| AAGATGGTGTTGGACTTTCT+TGG | 0.386462 | 3_4:-52602857 | Msa0506300:CDS |
| AGTGTCCCCTGAGATATTTC+TGG | 0.390259 | 3_4:-52599901 | Msa0506300:CDS |
| CTATTACAAAATGTTGGTTC+AGG | 0.398260 | 3_4:-52596660 | Msa0506300:CDS |
| ACCTTTGGTTCACCCCTTGT+TGG | 0.402209 | 3_4:-52601251 | Msa0506300:CDS |
| TCCAAAAGGCATGTAGATAC+TGG | 0.402853 | 3_4:+52601118 | None:intergenic |
| CACTATTTACTGGGAAAAGA+TGG | 0.411799 | 3_4:-52600324 | Msa0506300:CDS |
| CCACCATCCTTTGCAAATCA+TGG | 0.413072 | 3_4:-52602905 | Msa0506300:CDS |
| GTTCACCCCTTGTTGGTGAT+AGG | 0.416099 | 3_4:-52596608 | Msa0506300:CDS |
| TGAGAACCCAGATTCTATCT+TGG | 0.416920 | 3_4:-52596418 | Msa0506300:CDS |
| AATTTGAGGAGTATGTTTAT+GGG | 0.417132 | 3_4:-52599941 | Msa0506300:CDS |
| ACTCTTTCGTGATGATCATC+AGG | 0.417135 | 3_4:-52598122 | Msa0506300:CDS |
| GTATTGTTTGTATCACTTGT+TGG | 0.422070 | 3_4:+52595368 | Msa0506290:intron |
| GTCCATTTGTATTTGTACCT+TGG | 0.423701 | 3_4:-52594648 | Msa0506300:three_prime_UTR |
| GTTCACCCCTTGTTGGTGAC+AGG | 0.426704 | 3_4:-52601244 | Msa0506300:CDS |
| CTAATAATGAAGATATCGTT+TGG | 0.427657 | 3_4:-52598345 | Msa0506300:CDS |
| ATGTCATTCAATTTCTTGGA+TGG | 0.433231 | 3_4:+52600476 | None:intergenic |
| CCAACAGCATCATGGTCAAT+TGG | 0.440770 | 3_4:+52600362 | None:intergenic |
| AAAATCACCAGGAGCTTGAT+AGG | 0.441346 | 3_4:-52602650 | Msa0506300:CDS |
| TATCTTAAAGCAGAATGCTT+AGG | 0.442362 | 3_4:-52596312 | Msa0506300:CDS |
| AAGATTGAGCAATATGCTAT+AGG | 0.443681 | 3_4:-52595056 | Msa0506300:CDS |
| GTAAATGATGATTTGCTTCA+AGG | 0.445663 | 3_4:-52594874 | Msa0506300:three_prime_UTR |
| TCATCTGATAATTATGAAGA+TGG | 0.446459 | 3_4:-52602873 | Msa0506300:CDS |
| GAATGACATGAAGGTACATA+TGG | 0.447625 | 3_4:-52600462 | Msa0506300:CDS |
| GAATTTCCAAGATAGAATTC+GGG | 0.447857 | 3_4:+52601057 | None:intergenic |
| CTTGGAAATTCTCGTGGCAT+TGG | 0.448422 | 3_4:-52601045 | Msa0506300:CDS |
| ATTGACTTGGCAGCAGCAAC+AGG | 0.449441 | 3_4:-52595846 | Msa0506300:intron |
| CTTGGAAATTCTCGTGGCAT+TGG | 0.449984 | 3_4:-52596400 | Msa0506300:CDS |
| CAACTAAGAATCAACAAATA+GGG | 0.450207 | 3_4:-52595679 | Msa0506300:CDS |
| AACGAGTATAAAGCAATTAA+GGG | 0.451013 | 3_4:-52595125 | Msa0506300:CDS |
| GTCTGAACATTTCAAACAGT+TGG | 0.451266 | 3_4:-52600150 | Msa0506300:CDS |
| CTTCGTGCCAGAAATATCTC+AGG | 0.453015 | 3_4:+52599894 | None:intergenic |
| TATGATTCTGTCATATTGTA+CGG | 0.453928 | 3_4:-52594914 | Msa0506300:three_prime_UTR |
| AACTGATATCAGTTTGCAGT+TGG | 0.454655 | 3_4:-52600889 | Msa0506300:CDS |
| ACGTCATTCAATTTCTTGGA+TGG | 0.457785 | 3_4:+52595740 | Msa0506290:intron |
| ACTGATATCAGTTTGCAGTT+GGG | 0.461531 | 3_4:-52600888 | Msa0506300:CDS |
| CTGATATCAGTTTGCAGTTG+GGG | 0.462079 | 3_4:-52600887 | Msa0506300:CDS |
| TTCCAAGGTACAAATACAAA+TGG | 0.464703 | 3_4:+52594646 | Msa0506290:intron |
| ACAGTTGGAGGAATGGTTGA+TGG | 0.465873 | 3_4:-52595399 | Msa0506300:CDS |
| GAAGGTATTGCAAAGAAAGA+AGG | 0.478694 | 3_4:+52603213 | None:intergenic |
| AACTAAATCAGCTTGAACAT+TGG | 0.480618 | 3_4:+52598240 | None:intergenic |
| AATCAACGGAGTCGATAGAT+TGG | 0.480720 | 3_4:+52596734 | Msa0506310:CDS |
| AATAAGGATTCACTAGCAAC+TGG | 0.481982 | 3_4:-52596261 | Msa0506300:CDS |
| GTCTAAACACTTCAAACAGT+TGG | 0.484439 | 3_4:-52595414 | Msa0506300:CDS |
| TTGGAAGATGATCCTTTCAC+AGG | 0.487646 | 3_4:-52594617 | None:intergenic |
| ACATTTGGTTCACCCCTTGT+TGG | 0.489434 | 3_4:-52596615 | Msa0506300:CDS |
| CCATTGATTGTTACTGGACA+TGG | 0.489977 | 3_4:-52601356 | Msa0506300:CDS |
| TACATAGAGAATACACTTCA+GGG | 0.493529 | 3_4:+52595020 | Msa0506290:intron |
| CCATGTCCAGTAACAATCAA+TGG | 0.493890 | 3_4:+52601356 | Msa0506320:CDS |
| ATTGCTGAATACTATAGAAA+AGG | 0.497921 | 3_4:-52595464 | Msa0506300:CDS |
| TATTAGAAGAAGACGTGAAG+TGG | 0.497993 | 3_4:+52603247 | None:intergenic |
| ATGACAGAATCATAATTGTT+CGG | 0.498295 | 3_4:+52594923 | Msa0506290:intron |
| GAATGACGTGAAGGTACATA+TGG | 0.498676 | 3_4:-52595726 | Msa0506300:CDS |
| AACCAAATCAGCTTGAACAC+TGG | 0.498868 | 3_4:+52602779 | None:intergenic |
| CGTACCCGTTGGTTATATGG+TGG | 0.499140 | 3_4:-52595521 | Msa0506300:CDS |
| ATTGTTACTGGACATGGCCT+CGG | 0.505250 | 3_4:-52601350 | Msa0506300:CDS |
| AGAAGCCTTAAAAGCAAGAA+TGG | 0.505796 | 3_4:+52602803 | None:intergenic |
| ACTTCAAACAGTTGGAGGAA+TGG | 0.506869 | 3_4:-52595406 | Msa0506300:CDS |
| AAAACTAAGAATGAAAATGC+AGG | 0.513971 | 3_4:-52600416 | Msa0506300:CDS |
| AAGACTATGTTAATAACAAA+CGG | 0.514980 | 3_4:-52600172 | Msa0506300:CDS |
| TACATATGGCCCAACTTGAA+TGG | 0.515555 | 3_4:-52595712 | Msa0506300:CDS |
| TACATATGGCCCAACTTGAA+TGG | 0.515555 | 3_4:-52600448 | Msa0506300:CDS |
| CGCAAAGCAGCTATATTCGT+TGG | 0.515903 | 3_4:-52595151 | Msa0506300:CDS |
| AGTTTGCAGTTGCAGGAACT+AGG | 0.518078 | 3_4:-52596234 | Msa0506300:CDS |
| GTGGCATTGGTCTCAGTCCA+TGG | 0.519106 | 3_4:-52596387 | Msa0506300:CDS |
| TATTCACTTACCTGCATATG+TGG | 0.522090 | 3_4:+52596204 | Msa0506290:intron |
| GATAATTATGAAGATGGTGT+TGG | 0.522657 | 3_4:-52602867 | Msa0506300:CDS |
| ATATCACTATTACATAGCAT+TGG | 0.523245 | 3_4:-52601302 | Msa0506300:CDS |
| AACCAAAGGTAATGCAGAGC+GGG | 0.525547 | 3_4:+52601264 | Msa0506320:CDS |
| ACTCTTTCGCGAAAATCACC+AGG | 0.525563 | 3_4:-52602661 | Msa0506300:CDS |
| ATGATGATTTGCTTCAAGGT+TGG | 0.525855 | 3_4:-52594870 | Msa0506300:three_prime_UTR |
| GATGAAATTGATGAGAATGA+AGG | 0.528663 | 3_4:+52603195 | None:intergenic |
| CGTACCCGTTGGTTATATGG+AGG | 0.529527 | 3_4:-52600257 | Msa0506300:CDS |
| AGGATTGACACCACATATGC+AGG | 0.530379 | 3_4:-52596214 | Msa0506300:intron |
| AGATTGTGTCATAGTGAACT+TGG | 0.530927 | 3_4:+52603105 | None:intergenic |
| CAGCATCATGGTCAATTGGT+TGG | 0.530941 | 3_4:+52600366 | None:intergenic |
| ATATCACTATTACAAAATGT+TGG | 0.532409 | 3_4:-52596666 | Msa0506300:CDS |
| GTACCCGTTGGTTATATGGT+GGG | 0.534161 | 3_4:-52595520 | Msa0506300:CDS |
| CAATTGACCATGATGCTGTT+GGG | 0.534264 | 3_4:-52600361 | Msa0506300:CDS |
| TATGGAACCCAACAGCATCA+TGG | 0.536170 | 3_4:+52600354 | None:intergenic |
| AAGTTTGACACCACGTATGC+AGG | 0.536402 | 3_4:-52600859 | Msa0506300:intron |
| TTCTTCTGCTGAACTTAAGG+AGG | 0.536537 | 3_4:-52602757 | Msa0506300:CDS |
| CAAGAAATTGAATGACATGA+AGG | 0.541822 | 3_4:-52600471 | Msa0506300:CDS |
| CACATGATAAATGTTCCAAA+AGG | 0.544635 | 3_4:+52596459 | Msa0506290:CDS |
| AGTCCCACCATATAACCAAC+GGG | 0.547594 | 3_4:+52595517 | Msa0506290:intron |
| AGTCCCTCCATATAACCAAC+GGG | 0.547594 | 3_4:+52600253 | None:intergenic |
| CGATCTGTAATGAAGAGCCT+TGG | 0.549347 | 3_4:+52601143 | None:intergenic |
| TAAACACTTCAAACAGTTGG+AGG | 0.552501 | 3_4:-52595411 | Msa0506300:CDS |
| TGAACATTTCAAACAGTTGG+AGG | 0.555656 | 3_4:-52600147 | Msa0506300:CDS |
| ACTAGAGAAGTTGAAAATTG+AGG | 0.555998 | 3_4:-52598098 | Msa0506300:intron |
| CACATGATAAAAGTTCCAAA+AGG | 0.557037 | 3_4:+52601104 | None:intergenic |
| CAATCTCCTGTCACCAACAA+GGG | 0.557579 | 3_4:+52601238 | Msa0506320:CDS |
| TTCTATCTTGGAAATTCTCG+TGG | 0.561448 | 3_4:-52601051 | Msa0506300:CDS |
| GCAATCTCCTGTCACCAACA+AGG | 0.563457 | 3_4:+52601237 | Msa0506320:CDS |
| TTCTATCTTGGAAATTCTCG+TGG | 0.564113 | 3_4:-52596406 | Msa0506300:CDS |
| ATTTCAAACAGTTGGAGGAG+TGG | 0.565495 | 3_4:-52600142 | Msa0506300:CDS |
| TGTGTCATAGTGAACTTGGT+TGG | 0.568826 | 3_4:+52603109 | None:intergenic |
| ATCTCTATCGTAAAGCAACA+TGG | 0.570450 | 3_4:-52600962 | Msa0506300:CDS |
| CCATGATTTGCAAAGGATGG+TGG | 0.572173 | 3_4:+52602905 | None:intergenic |
| GTATGTTTATGGGTTACTCA+AGG | 0.572641 | 3_4:-52599931 | Msa0506300:CDS |
| ATCTTCCAAAGATGTTTCCA+AGG | 0.572701 | 3_4:+52594631 | Msa0506290:intron |
| CTTGGAAGTGGGTCTTTGTG+TGG | 0.573081 | 3_4:+52601161 | Msa0506320:CDS |
| CACGAAGCAGCTACAATCGT+TGG | 0.573825 | 3_4:-52599878 | Msa0506300:CDS |
| CCAATTGACCATGATGCTGT+TGG | 0.574111 | 3_4:-52600362 | Msa0506300:CDS |
| GTAATGAAGAGCCTTGGAAG+TGG | 0.574422 | 3_4:+52601149 | None:intergenic |
| CAGTTGGAGGAATGGTTGAT+GGG | 0.574475 | 3_4:-52595398 | Msa0506300:CDS |
| GTATTGCAAAGAAAGAAGGA+AGG | 0.575425 | 3_4:+52603217 | None:intergenic |
| ACCAACAAGGGGTGAACCAA+AGG | 0.576532 | 3_4:+52601250 | Msa0506320:CDS |
| AGGGACTACTTACAGAAGAA+TGG | 0.577212 | 3_4:-52600237 | Msa0506300:CDS |
| GTACCCGTTGGTTATATGGA+GGG | 0.577415 | 3_4:-52600256 | Msa0506300:CDS |
| GTAATGAAGAGCCTTGGAAG+TGG | 0.583493 | 3_4:+52596513 | None:intergenic |
| TGGGACTACTTACAGGAGAA+TGG | 0.583573 | 3_4:-52595501 | Msa0506300:CDS |
| GAAGCAGCTACAATCGTTGG+TGG | 0.584929 | 3_4:-52599875 | Msa0506300:CDS |
| GAATTTCCAAGATAGAATCT+GGG | 0.585398 | 3_4:+52596412 | Msa0506290:CDS |
| AGTCCATGATTTGCAAAGGA+TGG | 0.589663 | 3_4:+52602902 | None:intergenic |
| GCCAAATACTACAGTGAAGG+TGG | 0.590516 | 3_4:-52600197 | Msa0506300:CDS |
| TAATGAAGAGCCTTGGAAGT+GGG | 0.593330 | 3_4:+52596514 | None:intergenic |
| CACACAAAGACCCACTTCCA+AGG | 0.594406 | 3_4:-52596524 | Msa0506300:CDS |
| CACACAAAGACCCACTTCCA+AGG | 0.594406 | 3_4:-52601160 | Msa0506300:CDS |
| CAGCACACACAGCAAGAATG+TGG | 0.597435 | 3_4:-52600078 | Msa0506300:CDS |
| CAAGAAATTGAATGACGTGA+AGG | 0.598467 | 3_4:-52595735 | Msa0506300:CDS |
| TAGTATTTGGCAATAGCTAG+TGG | 0.599995 | 3_4:+52600209 | None:intergenic |
| AAACTAAGAATGAAAATGCA+GGG | 0.601227 | 3_4:-52600415 | Msa0506300:CDS |
| GAGATGAAGCCACAAAGAGA+AGG | 0.602952 | 3_4:-52600290 | Msa0506300:CDS |
| TAGTAGTCCATGATTTGCAA+AGG | 0.607664 | 3_4:+52602898 | None:intergenic |
| CAATACACGTAGAAAGAATG+TGG | 0.608038 | 3_4:-52595351 | Msa0506300:CDS |
| GCAATCTCCTATCACCAACA+AGG | 0.608291 | 3_4:+52596601 | Msa0506310:CDS |
| GAAGATATCGTTTGGAACGA+TGG | 0.609688 | 3_4:-52598337 | Msa0506300:CDS |
| AAAATGATATCTTCTTCTGG+TGG | 0.609974 | 3_4:+52595765 | Msa0506290:intron |
| GTATGTTTATAAGTTGCTCA+CGG | 0.612232 | 3_4:-52595204 | Msa0506300:CDS |
| TAGTCCCTCCATATAACCAA+CGG | 0.612991 | 3_4:+52600252 | None:intergenic |
| CAATCTCCTATCACCAACAA+GGG | 0.614885 | 3_4:+52596602 | Msa0506310:CDS |
| TAGAAGTCCATGATTTACAA+AGG | 0.620461 | 3_4:+52598374 | None:intergenic |
| TATTGCAAAGAAAGAAGGAA+GGG | 0.621155 | 3_4:+52603218 | None:intergenic |
| TAATGAAGAGCCTTGGAAGT+GGG | 0.621720 | 3_4:+52601150 | None:intergenic |
| ACAGAATCATAATTGTTCGG+AGG | 0.621721 | 3_4:+52594926 | Msa0506290:intron |
| TTCGTGCCAGAAATATCTCA+GGG | 0.622554 | 3_4:+52599895 | None:intergenic |
| TAGTCCCACCATATAACCAA+CGG | 0.625409 | 3_4:+52595516 | Msa0506290:intron |
| TATGGAACTCAGCAACATCA+CGG | 0.627880 | 3_4:+52595618 | Msa0506290:intron |
| AAAGCAGCTATATTCGTTGG+TGG | 0.633457 | 3_4:-52595148 | Msa0506300:CDS |
| TGATATCAGTTTGCAGTTGG+GGG | 0.634885 | 3_4:-52600886 | Msa0506300:CDS |
| GCTGAATACTATAGAAAAGG+CGG | 0.641083 | 3_4:-52595461 | Msa0506300:CDS |
| GTAACAATCAATGGACTCTG+TGG | 0.645494 | 3_4:+52601365 | Msa0506320:CDS |
| ATTGCCAAATACTACAGTGA+AGG | 0.647240 | 3_4:-52600200 | Msa0506300:CDS |
| TATTCACCTACCTGCATACG+TGG | 0.651228 | 3_4:+52600849 | None:intergenic |
| TAGTATTCAGCAATAACTAG+AGG | 0.662118 | 3_4:+52595473 | Msa0506290:intron |
| GTTACTGGACATGGCCTCGG+AGG | 0.668073 | 3_4:-52601347 | Msa0506300:CDS |
| ACATAGAGAATACACTTCAG+GGG | 0.668289 | 3_4:+52595021 | Msa0506290:intron |
| AATCTCCTGTCACCAACAAG+GGG | 0.681580 | 3_4:+52601239 | Msa0506320:CDS |
| GAACCAAATGTGATGCAGAG+TGG | 0.684884 | 3_4:+52596627 | Msa0506310:CDS |
| GCTTGATAGGTTGAAAACTG+AGG | 0.693692 | 3_4:-52602637 | Msa0506300:intron |
| GAGAAGCAATTGATCCTCCG+AGG | 0.698135 | 3_4:+52601333 | Msa0506320:CDS |
| TACACGTAGAAAGAATGTGG+AGG | 0.709499 | 3_4:-52595348 | Msa0506300:CDS |
| GAACCAAAGGTAATGCAGAG+CGG | 0.710727 | 3_4:+52601263 | Msa0506320:CDS |
| AATCTCCTATCACCAACAAG+GGG | 0.735230 | 3_4:+52596603 | Msa0506310:CDS |
| TCGTGCCAGAAATATCTCAG+GGG | 0.782489 | 3_4:+52599896 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAAATCAAGTAAA+TGG | - | chr3_4:52595763-52595782 | Msa0506300:CDS | 10.0% |
| !! | AAAAATAAAATCAAGTAAAT+GGG | - | chr3_4:52595764-52595783 | Msa0506300:CDS | 10.0% |
| !!! | AAGAATTTTTAAAATAATCA+CGG | + | chr3_4:52596373-52596392 | Msa0506290:CDS | 10.0% |
| !! | AATGAGTATAAAAAAATTAA+GGG | - | chr3_4:52598022-52598041 | Msa0506300:intron | 10.0% |
| !!! | AAATATAAAAAATTTGGTTT+TGG | - | chr3_4:52598823-52598842 | Msa0506300:intron | 10.0% |
| !!! | TCTCTATAAAAATATTTTTT+TGG | + | chr3_4:52599055-52599074 | None:intergenic | 10.0% |
| !! | TCTATTACAATAAATTAAAA+GGG | + | chr3_4:52599818-52599837 | None:intergenic | 10.0% |
| !! | TTCTATTACAATAAATTAAA+AGG | + | chr3_4:52599819-52599838 | None:intergenic | 10.0% |
| !! | GAAAATTAAAACAAAAATTA+AGG | - | chr3_4:52600229-52600248 | Msa0506300:CDS | 10.0% |
| !!! | GTTTTATTAAATGAGATAAT+TGG | + | chr3_4:52595184-52595203 | Msa0506290:intron | 15.0% |
| !! | AATCAGAAAAATAATCAAAA+AGG | + | chr3_4:52595279-52595298 | Msa0506290:intron | 15.0% |
| !! | TAAATGAAATTATAAAGCTA+AGG | + | chr3_4:52595744-52595763 | Msa0506290:intron | 15.0% |
| !! | GAATGAGTATAAAAAAATTA+AGG | - | chr3_4:52598021-52598040 | Msa0506300:intron | 15.0% |
| !! | ATTACAAAATCAGAAATATT+TGG | + | chr3_4:52598235-52598254 | None:intergenic | 15.0% |
| !! | TTTATATAAAAAAATCTAGG+TGG | + | chr3_4:52598690-52598709 | None:intergenic | 15.0% |
| !!! | CCAAATTTTTTATATTTGTA+GGG | + | chr3_4:52598820-52598839 | None:intergenic | 15.0% |
| !!! | ACCAAATTTTTTATATTTGT+AGG | + | chr3_4:52598821-52598840 | None:intergenic | 15.0% |
| !! | AGGATTAAAATGAATATTAT+AGG | - | chr3_4:52598940-52598959 | Msa0506300:intron | 15.0% |
| !! | GGATTAAAATGAATATTATA+GGG | - | chr3_4:52598941-52598960 | Msa0506300:intron | 15.0% |
| !! | AAATCATTTCATATTGAAAT+TGG | + | chr3_4:52598968-52598987 | None:intergenic | 15.0% |
| !!! | AATATGAAATGATTTTACAA+GGG | - | chr3_4:52598973-52598992 | Msa0506300:intron | 15.0% |
| !!! | AAATATAGAATATTTGGTTT+TGG | + | chr3_4:52599019-52599038 | None:intergenic | 15.0% |
| !! | AGATTTAATAGACTTAAATA+TGG | + | chr3_4:52599115-52599134 | None:intergenic | 15.0% |
| !! | TAGATGAAATTATAAATCTT+AGG | + | chr3_4:52600204-52600223 | None:intergenic | 15.0% |
| !! | AATCCAAATTATCAATTAAA+GGG | + | chr3_4:52600337-52600356 | None:intergenic | 15.0% |
| !! | TAATCCAAATTATCAATTAA+AGG | + | chr3_4:52600338-52600357 | None:intergenic | 15.0% |
| !!! | AGGGTTTTTTTTTTTTTTTT+TGG | - | chr3_4:52600556-52600575 | Msa0506300:intron | 15.0% |
| !!! | TTATTTTTGATAACATATCT+AGG | - | chr3_4:52600963-52600982 | Msa0506300:CDS | 15.0% |
| !!! | GGATTTTTTTTAAATAATCA+TGG | + | chr3_4:52600999-52601018 | None:intergenic | 15.0% |
| !! | AAAGAAATTATTTGAATTTG+AGG | - | chr3_4:52602646-52602665 | Msa0506300:CDS | 15.0% |
| !! | AAAAATAATCAAAAAGGTCA+AGG | + | chr3_4:52595273-52595292 | Msa0506290:intron | 20.0% |
| !! | GAATTTATAACCTTTCTATT+TGG | - | chr3_4:52595324-52595343 | Msa0506300:CDS | 20.0% |
| !!! | TTTTTTTTAGCCAAATAGAA+AGG | + | chr3_4:52595337-52595356 | Msa0506290:intron | 20.0% |
| !! | TGAATTATTAAGTATGTCTT+AGG | - | chr3_4:52595391-52595410 | Msa0506300:CDS | 20.0% |
| !! | GAATTATTAAGTATGTCTTA+GGG | - | chr3_4:52595392-52595411 | Msa0506300:CDS | 20.0% |
| !! | TTTAAGAAAGCTTATGAAAA+CGG | - | chr3_4:52595446-52595465 | Msa0506300:CDS | 20.0% |
| !!! | TATGCCTTATATTTTAAGTA+TGG | - | chr3_4:52595976-52595995 | Msa0506300:intron | 20.0% |
| !! | AACACCATACTTAAAATATA+AGG | + | chr3_4:52595983-52596002 | Msa0506290:intron | 20.0% |
| !! | ATAATCATCTAATACTGAAT+AGG | - | chr3_4:52597079-52597098 | Msa0506300:intron | 20.0% |
| !! | TTTAAAGATAACTAAAGTTC+TGG | - | chr3_4:52597196-52597215 | Msa0506300:intron | 20.0% |
| !! | GATGAATTATATAAAAAGAG+AGG | - | chr3_4:52597252-52597271 | Msa0506300:intron | 20.0% |
| !! | ACAAGTAAATGTTAGAAATA+AGG | + | chr3_4:52597353-52597372 | None:intergenic | 20.0% |
| !!! | AGTAAATAGTGAGTTTTTTA+TGG | + | chr3_4:52597541-52597560 | None:intergenic | 20.0% |
| !! | ATAAAAAACTCACTATTTAC+TGG | - | chr3_4:52597540-52597559 | Msa0506300:intron | 20.0% |
| !! | TAAAAAACTCACTATTTACT+GGG | - | chr3_4:52597541-52597560 | Msa0506300:intron | 20.0% |
| !! | AAGACTATGTTAATAACAAA+CGG | - | chr3_4:52597702-52597721 | Msa0506300:intron | 20.0% |
| !! | AAAGAAATTGTTAGAATTTG+AGG | - | chr3_4:52597919-52597938 | Msa0506300:intron | 20.0% |
| !!! | AAATTCACAAGTTTGTTTTA+AGG | + | chr3_4:52598190-52598209 | None:intergenic | 20.0% |
| !! | TTAAAACAAACTTGTGAATT+TGG | - | chr3_4:52598189-52598208 | Msa0506300:CDS | 20.0% |
| !! | TAAAACAAACTTGTGAATTT+GGG | - | chr3_4:52598190-52598209 | Msa0506300:CDS | 20.0% |
| !! | AAAATCAGAAATATTTGGAA+GGG | + | chr3_4:52598230-52598249 | None:intergenic | 20.0% |
| !!! | ATAATTTATATGTTTCTGCA+TGG | - | chr3_4:52598300-52598319 | Msa0506300:CDS | 20.0% |
| !!! | TCCCTGTAAAAATATTTTTT+CGG | - | chr3_4:52598787-52598806 | Msa0506300:intron | 20.0% |
| !!! | ACCGAAAAAATATTTTTACA+GGG | + | chr3_4:52598791-52598810 | None:intergenic | 20.0% |
| !!! | AACCGAAAAAATATTTTTAC+AGG | + | chr3_4:52598792-52598811 | None:intergenic | 20.0% |
| !! | CCCTACAAATATAAAAAATT+TGG | - | chr3_4:52598817-52598836 | Msa0506300:intron | 20.0% |
| !!! | CAATATGAATCAATTTTACA+AGG | + | chr3_4:52598870-52598889 | None:intergenic | 20.0% |
| !!! | CTTGTAAAATTGATTCATAT+TGG | - | chr3_4:52598868-52598887 | Msa0506300:intron | 20.0% |
| !!! | AAATTGATTCATATTGGATT+TGG | - | chr3_4:52598874-52598893 | Msa0506300:intron | 20.0% |
| !! | CAAATATTCTACATATTACA+AGG | + | chr3_4:52598901-52598920 | None:intergenic | 20.0% |
| !!! | CAATATGAAATGATTTTACA+AGG | - | chr3_4:52598972-52598991 | Msa0506300:intron | 20.0% |
| !! | AATAGACTTAAATATGGAAA+TGG | + | chr3_4:52599109-52599128 | None:intergenic | 20.0% |
| !! | GAAAATGATTGAAGATTATA+TGG | + | chr3_4:52599268-52599287 | None:intergenic | 20.0% |
| !!! | ATTTATAAGTTCAAGTTTTC+AGG | + | chr3_4:52599391-52599410 | None:intergenic | 20.0% |
| !!! | TTTTACAATTATAGCGTTTA+AGG | - | chr3_4:52599602-52599621 | Msa0506300:intron | 20.0% |
| !!! | ATTCCCTTTAATTGATAATT+TGG | - | chr3_4:52600331-52600350 | Msa0506300:CDS | 20.0% |
| !!! | ATATGCCTATATTTTAACAA+TGG | - | chr3_4:52600514-52600533 | Msa0506300:intron | 20.0% |
| !! | AAACACCATTGTTAAAATAT+AGG | + | chr3_4:52600522-52600541 | None:intergenic | 20.0% |
| !! | AAATGCAAACAAAGTAAAAA+TGG | + | chr3_4:52600687-52600706 | None:intergenic | 20.0% |
| !! | AAAATAAGAAATCATGAACT+CGG | + | chr3_4:52600864-52600883 | None:intergenic | 20.0% |
| !! | ATATCACTATTACAAAATGT+TGG | - | chr3_4:52601208-52601227 | Msa0506300:CDS | 20.0% |
| !! | AAGACTATGTTCATAATAAA+AGG | - | chr3_4:52602438-52602457 | Msa0506300:intron | 20.0% |
| !! | CTTAAAAAACTTGTGTATTT+GGG | - | chr3_4:52602909-52602928 | Msa0506300:CDS | 20.0% |
| ! | ATATGGTTAATTGAAGAGAA+TGG | + | chr3_4:52594726-52594745 | Msa0506290:intron | 25.0% |
| ! | ATGAAATGATTGAGATGATA+TGG | + | chr3_4:52594743-52594762 | Msa0506290:intron | 25.0% |
| !!! | GTTAGTGTCATTTATATATG+AGG | + | chr3_4:52594883-52594902 | Msa0506290:intron | 25.0% |
| ! | TCATCTGATAATTATGAAGA+TGG | - | chr3_4:52595001-52595020 | Msa0506300:three_prime_UTR | 25.0% |
| !!! | TTTTACCATTCTTGCTTTTA+AGG | - | chr3_4:52595066-52595085 | Msa0506300:CDS | 25.0% |
| ! | TAAAGTTTGATGTGTAGATT+TGG | - | chr3_4:52595358-52595377 | Msa0506300:CDS | 25.0% |
| ! | TAGCATATGAAAACAACTTA+TGG | - | chr3_4:52595522-52595541 | Msa0506300:CDS | 25.0% |
| ! | ATAAGCTGTTTATCCAAATA+TGG | - | chr3_4:52595564-52595583 | Msa0506300:CDS | 25.0% |
| !! | ATATGTTGTTTATCCAAACA+GGG | + | chr3_4:52595621-52595640 | Msa0506290:intron | 25.0% |
| !! | AATATGTTGTTTATCCAAAC+AGG | + | chr3_4:52595622-52595641 | Msa0506290:intron | 25.0% |
| !! | ATTCTTTATAAACGCTTTTC+AGG | - | chr3_4:52595661-52595680 | Msa0506300:CDS | 25.0% |
| !!! | ACAAAAGGAATCTTTTTTCA+AGG | + | chr3_4:52595797-52595816 | Msa0506290:intron | 25.0% |
| !! | TTGAAAAAAGATTCCTTTTG+TGG | - | chr3_4:52595796-52595815 | Msa0506300:CDS | 25.0% |
| ! | TCACTTATAAACACATCTAA+TGG | + | chr3_4:52595944-52595963 | Msa0506290:intron | 25.0% |
| !! | ATTTGTTTCATTAGTTTGGT+TGG | - | chr3_4:52596092-52596111 | Msa0506300:intron | 25.0% |
| ! | AAAATAATCACGGTAAAGTA+CGG | + | chr3_4:52596363-52596382 | Msa0506290:intron | 25.0% |
| ! | ATTGAAGGGAAAATGAAATA+CGG | + | chr3_4:52596449-52596468 | Msa0506290:CDS | 25.0% |
| ! | ATATCACTATTACATAGCAT+TGG | - | chr3_4:52596572-52596591 | Msa0506300:CDS | 25.0% |
| ! | AGAATTTCCAAGATAGAATT+CGG | + | chr3_4:52596821-52596840 | Msa0506310:CDS | 25.0% |
| !! | TTGATTTTTATCATAGACTG+AGG | + | chr3_4:52596855-52596874 | Msa0506310:intron | 25.0% |
| ! | GAAATAAGGTCATGAAAAAT+TGG | + | chr3_4:52597339-52597358 | None:intergenic | 25.0% |
| ! | AAAACTAAGAATGAAAATGC+AGG | - | chr3_4:52597458-52597477 | Msa0506300:intron | 25.0% |
| ! | AAACTAAGAATGAAAATGCA+GGG | - | chr3_4:52597459-52597478 | Msa0506300:intron | 25.0% |
| !! | AATTTGAGGAGTATGTTTAT+GGG | - | chr3_4:52597933-52597952 | Msa0506300:intron | 25.0% |
| ! | AAGATTAAACAGTATGCTAT+AGG | - | chr3_4:52598091-52598110 | Msa0506300:intron | 25.0% |
| ! | TACATAGTAATTACACTTCA+GGG | + | chr3_4:52598130-52598149 | None:intergenic | 25.0% |
| ! | TTACATAGTAATTACACTTC+AGG | + | chr3_4:52598131-52598150 | None:intergenic | 25.0% |
| ! | CAAAATCAGAAATATTTGGA+AGG | + | chr3_4:52598231-52598250 | None:intergenic | 25.0% |
| !! | TCTGATTTTGTAATATTGCA+TGG | - | chr3_4:52598241-52598260 | Msa0506300:CDS | 25.0% |
| !! | ATTTTGTAATATTGCATGGT+TGG | - | chr3_4:52598245-52598264 | Msa0506300:CDS | 25.0% |
| !! | TTTTGTAATATTGCATGGTT+GGG | - | chr3_4:52598246-52598265 | Msa0506300:CDS | 25.0% |
| !! | AATCATTTTGTAGAGCTAAT+AGG | - | chr3_4:52598462-52598481 | Msa0506300:intron | 25.0% |
| ! | ACCACCTAGATTTATTAAAT+CGG | - | chr3_4:52598716-52598735 | Msa0506300:intron | 25.0% |
| !! | TAAGCCGATTTAATAAATCT+AGG | + | chr3_4:52598723-52598742 | None:intergenic | 25.0% |
| !!! | CATTTTAATCCTCATTTTGA+GGG | + | chr3_4:52598932-52598951 | None:intergenic | 25.0% |
| !!! | TCATTTTAATCCTCATTTTG+AGG | + | chr3_4:52598933-52598952 | None:intergenic | 25.0% |
| ! | ACCAAATATTCTATATTTGC+AGG | - | chr3_4:52599021-52599040 | Msa0506300:intron | 25.0% |
| ! | CCAAATATTCTATATTTGCA+GGG | - | chr3_4:52599022-52599041 | Msa0506300:intron | 25.0% |
| ! | TGATTGAAGATTATATGGTT+AGG | + | chr3_4:52599263-52599282 | None:intergenic | 25.0% |
| ! | CTAATAATGAAGATATCGTT+TGG | - | chr3_4:52599529-52599548 | Msa0506300:intron | 25.0% |
| !! | GAATTTTGAACTGAACTATT+AGG | - | chr3_4:52599836-52599855 | Msa0506300:CDS | 25.0% |
| !!! | TGATACTATTTTAGAAATCG+TGG | - | chr3_4:52600035-52600054 | Msa0506300:CDS | 25.0% |
| !!! | AAGGGAATTTATTTTCTTCA+AGG | + | chr3_4:52600319-52600338 | None:intergenic | 25.0% |
| ! | GGTAAACTTATGATATTAGT+TGG | - | chr3_4:52600577-52600596 | Msa0506300:intron | 25.0% |
| ! | AAGTCTAGATACATCAAAAA+TGG | - | chr3_4:52600630-52600649 | Msa0506300:intron | 25.0% |
| ! | AGATACATCAAAAATGGAAA+AGG | - | chr3_4:52600636-52600655 | Msa0506300:intron | 25.0% |
| ! | ATATGAATACGGTATAATAC+GGG | + | chr3_4:52601029-52601048 | None:intergenic | 25.0% |
| ! | CATATGAATACGGTATAATA+CGG | + | chr3_4:52601030-52601049 | None:intergenic | 25.0% |
| ! | TACATATTGCCATATGAATA+CGG | + | chr3_4:52601040-52601059 | None:intergenic | 25.0% |
| ! | GCATTAACATTGTTACATAA+GGG | + | chr3_4:52601105-52601124 | None:intergenic | 25.0% |
| ! | TGCATTAACATTGTTACATA+AGG | + | chr3_4:52601106-52601125 | None:intergenic | 25.0% |
| !! | TATATCACGTAGTTCTATTT+GGG | - | chr3_4:52601303-52601322 | Msa0506300:CDS | 25.0% |
| ! | TGAAATATCTAATACTCAGT+AGG | - | chr3_4:52601708-52601727 | Msa0506300:intron | 25.0% |
| ! | TACACATAATGAGTCTAAAT+TGG | + | chr3_4:52601959-52601978 | None:intergenic | 25.0% |
| ! | GAAATAAGGTCATGAAAAAT+TGG | + | chr3_4:52597339-52597358 | None:intergenic | 25.0% |
| ! | GATAAAATGATATCTTCTTC+TGG | + | chr3_4:52602115-52602134 | None:intergenic | 25.0% |
| ! | CAACTAAGAATCAACAAATA+GGG | - | chr3_4:52602195-52602214 | Msa0506300:intron | 25.0% |
| ! | ATTGCTGAATACTATAGAAA+AGG | - | chr3_4:52602410-52602429 | Msa0506300:intron | 25.0% |
| ! | AACGAGTATAAAGCAATTAA+GGG | - | chr3_4:52602749-52602768 | Msa0506300:CDS | 25.0% |
| !!! | CCAAATACACAAGTTTTTTA+AGG | + | chr3_4:52602911-52602930 | None:intergenic | 25.0% |
| ! | CCTTAAAAAACTTGTGTATT+TGG | - | chr3_4:52602908-52602927 | Msa0506300:CDS | 25.0% |
| ! | ATGACAGAATCATAATTGTT+CGG | + | chr3_4:52602954-52602973 | None:intergenic | 25.0% |
| ! | TATGATTCTGTCATATTGTA+CGG | - | chr3_4:52602960-52602979 | Msa0506300:intron | 25.0% |
| ! | TTGGTATGTTTAACATGAAT+AGG | - | chr3_4:52603023-52603042 | Msa0506300:intron | 25.0% |
| ! | AGATAAATGAAAAATGTGAG+AGG | - | chr3_4:52603098-52603117 | Msa0506300:intron | 25.0% |
| ! | GATAAATGAAAAATGTGAGA+GGG | - | chr3_4:52603099-52603118 | Msa0506300:intron | 25.0% |
| ! | TTCTCAAATCTTAATTGCAT+TGG | + | chr3_4:52603128-52603147 | None:intergenic | 25.0% |
| ! | GTTATTACAGTAAGAAATTG+AGG | + | chr3_4:52603199-52603218 | None:intergenic | 25.0% |
| TATTGCAAAGAAAGAAGGAA+GGG | + | chr3_4:52594659-52594678 | Msa0506290:intron | 30.0% | |
| GATGAAATTGATGAGAATGA+AGG | + | chr3_4:52594682-52594701 | Msa0506290:intron | 30.0% | |
| AGAAATGAAAAAGTCATGCA+TGG | + | chr3_4:52594834-52594853 | Msa0506290:intron | 30.0% | |
| GATAATTATGAAGATGGTGT+TGG | - | chr3_4:52595007-52595026 | Msa0506300:three_prime_UTR | 30.0% | |
| TGGAAACTTGATAAAGAAAC+TGG | - | chr3_4:52595037-52595056 | Msa0506300:CDS | 30.0% | |
| !! | GTTGTTTTCATATGCTATCT+TGG | + | chr3_4:52595519-52595538 | Msa0506290:intron | 30.0% |
| TGGATAAACAACATATTCTC+TGG | - | chr3_4:52595625-52595644 | Msa0506300:CDS | 30.0% | |
| AAGGATTAAAACAAGTTGTG+AGG | + | chr3_4:52595725-52595744 | Msa0506290:intron | 30.0% | |
| TTTCTTCAAGGTCATTGTTT+AGG | + | chr3_4:52595847-52595866 | Msa0506290:intron | 30.0% | |
| AATCATGTCAACAAAACAAC+AGG | + | chr3_4:52595915-52595934 | Msa0506290:intron | 30.0% | |
| TTTAAGTATGGTGTTTGTGA+TGG | - | chr3_4:52595988-52596007 | Msa0506300:intron | 30.0% | |
| GAGCATTTGTTTCATTAGTT+TGG | - | chr3_4:52596088-52596107 | Msa0506300:intron | 30.0% | |
| TAGAGCAAGAAATGAGATTA+GGG | + | chr3_4:52596257-52596276 | Msa0506290:intron | 30.0% | |
| ! | CACATCTCTTTTCAAATATC+TGG | - | chr3_4:52596285-52596304 | Msa0506300:CDS | 30.0% |
| TTGCTACATAAGTGATTGAA+GGG | + | chr3_4:52596463-52596482 | Msa0506290:CDS | 30.0% | |
| ATTGCTACATAAGTGATTGA+AGG | + | chr3_4:52596464-52596483 | Msa0506290:CDS | 30.0% | |
| CACATGATAAAAGTTCCAAA+AGG | + | chr3_4:52596773-52596792 | Msa0506310:intron | 30.0% | |
| GAATTTCCAAGATAGAATTC+GGG | + | chr3_4:52596820-52596839 | Msa0506310:CDS | 30.0% | |
| ! | ACAAAACAACCCTTTTGATA+AGG | - | chr3_4:52597164-52597183 | Msa0506300:intron | 30.0% |
| ! | CAAAACAACCCTTTTGATAA+GGG | - | chr3_4:52597165-52597184 | Msa0506300:intron | 30.0% |
| !! | ATAACTAAAGTTCTGGAATG+AGG | - | chr3_4:52597203-52597222 | Msa0506300:intron | 30.0% |
| ATGTCATTCAATTTCTTGGA+TGG | + | chr3_4:52597401-52597420 | None:intergenic | 30.0% | |
| CTTCATGTCATTCAATTTCT+TGG | + | chr3_4:52597405-52597424 | None:intergenic | 30.0% | |
| CAAGAAATTGAATGACATGA+AGG | - | chr3_4:52597403-52597422 | Msa0506300:intron | 30.0% | |
| !! | CTTTTTGTACCATTCAAGTT+GGG | + | chr3_4:52597438-52597457 | None:intergenic | 30.0% |
| ! | TCTTTTTGTACCATTCAAGT+TGG | + | chr3_4:52597439-52597458 | None:intergenic | 30.0% |
| ! | TGACTATAGATTCTTGCTTT+TGG | - | chr3_4:52597828-52597847 | Msa0506300:intron | 30.0% |
| !! | GACTATAGATTCTTGCTTTT+GGG | - | chr3_4:52597829-52597848 | Msa0506300:intron | 30.0% |
| ! | GAATTTGAGGAGTATGTTTA+TGG | - | chr3_4:52597932-52597951 | Msa0506300:intron | 30.0% |
| ACATAGTAATTACACTTCAG+GGG | + | chr3_4:52598129-52598148 | None:intergenic | 30.0% | |
| !! | AAGTTTTGTGGATATTCAGT+TGG | - | chr3_4:52598275-52598294 | Msa0506300:CDS | 30.0% |
| !! | AGATACTGTTTCTATCTGAT+AGG | - | chr3_4:52598327-52598346 | Msa0506300:CDS | 30.0% |
| AACTGTGCAACTAACTAATT+AGG | - | chr3_4:52598389-52598408 | Msa0506300:CDS | 30.0% | |
| !! | GAATTTCTGGGAATTTTTCA+AGG | + | chr3_4:52598526-52598545 | None:intergenic | 30.0% |
| TTTAAGAGTAGGAATTTCTG+AGG | + | chr3_4:52598560-52598579 | None:intergenic | 30.0% | |
| CAAAATGTCAGATATTTGCA+GGG | + | chr3_4:52598760-52598779 | None:intergenic | 30.0% | |
| !!! | AAAAATTTGGTTTTGGTCCT+TGG | - | chr3_4:52598830-52598849 | Msa0506300:intron | 30.0% |
| AGGACTAAAACAAAATACCA+AGG | + | chr3_4:52598850-52598869 | None:intergenic | 30.0% | |
| AGGGTTAAAACAAAATACCA+AGG | - | chr3_4:52598992-52599011 | Msa0506300:intron | 30.0% | |
| CCCTGCAAATATAGAATATT+TGG | + | chr3_4:52599025-52599044 | None:intergenic | 30.0% | |
| AGTGGTCTTTAAATAGTTGA+AGG | + | chr3_4:52599238-52599257 | None:intergenic | 30.0% | |
| AGATTATATGGTTAGGAAAG+TGG | + | chr3_4:52599256-52599275 | None:intergenic | 30.0% | |
| ACAAATGAAGAAGTAATGCA+TGG | + | chr3_4:52599344-52599363 | None:intergenic | 30.0% | |
| CTAGTATCCTTTGTAAATCA+TGG | - | chr3_4:52599493-52599512 | Msa0506300:intron | 30.0% | |
| TAGAAGTCCATGATTTACAA+AGG | + | chr3_4:52599503-52599522 | None:intergenic | 30.0% | |
| AACTAAATCAGCTTGAACAT+TGG | + | chr3_4:52599637-52599656 | None:intergenic | 30.0% | |
| AGTTTCTTCAACTGAACTTA+AGG | - | chr3_4:52599653-52599672 | Msa0506300:intron | 30.0% | |
| TTCCAAATTTCTCTGTTAAC+AGG | - | chr3_4:52599718-52599737 | Msa0506300:intron | 30.0% | |
| ACTAGAGAAGTTGAAAATTG+AGG | - | chr3_4:52599776-52599795 | Msa0506300:intron | 30.0% | |
| GAACTATTAGGTAGAATTTC+TGG | - | chr3_4:52599848-52599867 | Msa0506300:CDS | 30.0% | |
| !! | TATTAGGTAGAATTTCTGGT+TGG | - | chr3_4:52599852-52599871 | Msa0506300:CDS | 30.0% |
| !! | ATTAGGTAGAATTTCTGGTT+GGG | - | chr3_4:52599853-52599872 | Msa0506300:CDS | 30.0% |
| TGGTGTTTGGATATAAATAG+TGG | - | chr3_4:52599969-52599988 | Msa0506300:CDS | 30.0% | |
| GGTGTTTGGATATAAATAGT+GGG | - | chr3_4:52599970-52599989 | Msa0506300:CDS | 30.0% | |
| !! | ACTATTTTAGAAATCGTGGT+TGG | - | chr3_4:52600039-52600058 | Msa0506300:CDS | 30.0% |
| !! | CTATTTTAGAAATCGTGGTT+GGG | - | chr3_4:52600040-52600059 | Msa0506300:CDS | 30.0% |
| TGAATTGCTTAATCGATCAT+TGG | + | chr3_4:52600393-52600412 | None:intergenic | 30.0% | |
| GTAGATGGACAAAACAATTT+GGG | + | chr3_4:52600728-52600747 | None:intergenic | 30.0% | |
| TGTAGATGGACAAAACAATT+TGG | + | chr3_4:52600729-52600748 | None:intergenic | 30.0% | |
| TATGAATACGGTATAATACG+GGG | + | chr3_4:52601028-52601047 | None:intergenic | 30.0% | |
| CGTATTATACCGTATTCATA+TGG | - | chr3_4:52601028-52601047 | Msa0506300:CDS | 30.0% | |
| TCATATGGCAATATGTATCT+AGG | - | chr3_4:52601043-52601062 | Msa0506300:CDS | 30.0% | |
| !! | CTATTACAAAATGTTGGTTC+AGG | - | chr3_4:52601214-52601233 | Msa0506300:CDS | 30.0% |
| ! | CTATATCACGTAGTTCTATT+TGG | - | chr3_4:52601302-52601321 | Msa0506300:CDS | 30.0% |
| CACATGATAAATGTTCCAAA+AGG | + | chr3_4:52601418-52601437 | None:intergenic | 30.0% | |
| GAATTTCCAAGATAGAATCT+GGG | + | chr3_4:52601465-52601484 | None:intergenic | 30.0% | |
| AGAATTTCCAAGATAGAATC+TGG | + | chr3_4:52601466-52601485 | None:intergenic | 30.0% | |
| !! | CAAGTTCTTCATTTTTACCA+TGG | + | chr3_4:52601507-52601526 | None:intergenic | 30.0% |
| ! | GAACTTGAATCTGTTGATTA+TGG | - | chr3_4:52601520-52601539 | Msa0506300:intron | 30.0% |
| TATCTTAAAGCAGAATGCTT+AGG | - | chr3_4:52601562-52601581 | Msa0506300:intron | 30.0% | |
| CCAAGTCAATTGTAGAAATA+AGG | + | chr3_4:52602018-52602037 | None:intergenic | 30.0% | |
| !! | CCTTATTTCTACAATTGACT+TGG | - | chr3_4:52602015-52602034 | Msa0506300:intron | 30.0% |
| AAAATGATATCTTCTTCTGG+TGG | + | chr3_4:52602112-52602131 | None:intergenic | 30.0% | |
| !! | CTTTTTGTACCATTCAAGTT+GGG | + | chr3_4:52597438-52597457 | None:intergenic | 30.0% |
| GCAACTAAGAATCAACAAAT+AGG | - | chr3_4:52602194-52602213 | Msa0506300:intron | 30.0% | |
| TAGTATTCAGCAATAACTAG+AGG | + | chr3_4:52602404-52602423 | None:intergenic | 30.0% | |
| GTATTGTTTGTATCACTTGT+TGG | + | chr3_4:52602509-52602528 | None:intergenic | 30.0% | |
| ! | ACTTTTATGCAGAGAGTTAA+AGG | - | chr3_4:52602598-52602617 | Msa0506300:intron | 30.0% |
| GTATGTTTATAAGTTGCTCA+CGG | - | chr3_4:52602670-52602689 | Msa0506300:CDS | 30.0% | |
| GAACGAGTATAAAGCAATTA+AGG | - | chr3_4:52602748-52602767 | Msa0506300:CDS | 30.0% | |
| AAGATTGAGCAATATGCTAT+AGG | - | chr3_4:52602818-52602837 | Msa0506300:CDS | 30.0% | |
| TACATAGAGAATACACTTCA+GGG | + | chr3_4:52602857-52602876 | None:intergenic | 30.0% | |
| TTACATAGAGAATACACTTC+AGG | + | chr3_4:52602858-52602877 | None:intergenic | 30.0% | |
| AAAAAACTTGTGTATTTGGG+AGG | - | chr3_4:52602912-52602931 | Msa0506300:CDS | 30.0% | |
| TACGGTTTGTAGAAACTTAT+TGG | - | chr3_4:52602978-52602997 | Msa0506300:intron | 30.0% | |
| !! | GTAAATGATGATTTGCTTCA+AGG | - | chr3_4:52603000-52603019 | Msa0506300:intron | 30.0% |
| CACATGTACAAAAATCTCAT+TGG | + | chr3_4:52603171-52603190 | None:intergenic | 30.0% | |
| TTCCAAGGTACAAATACAAA+TGG | + | chr3_4:52603231-52603250 | None:intergenic | 30.0% | |
| TATTAGAAGAAGACGTGAAG+TGG | + | chr3_4:52594630-52594649 | Msa0506290:intron | 35.0% | |
| GTATTGCAAAGAAAGAAGGA+AGG | + | chr3_4:52594660-52594679 | Msa0506290:intron | 35.0% | |
| !! | GAAGGTATTGCAAAGAAAGA+AGG | + | chr3_4:52594664-52594683 | Msa0506290:intron | 35.0% |
| AGATTGTGTCATAGTGAACT+TGG | + | chr3_4:52594772-52594791 | Msa0506290:intron | 35.0% | |
| ! | TTTTCTTGCAGATTTAGCAG+TGG | - | chr3_4:52594917-52594936 | Msa0506300:three_prime_UTR | 35.0% |
| ! | TAGTAGTCCATGATTTGCAA+AGG | + | chr3_4:52594979-52594998 | Msa0506290:intron | 35.0% |
| AGAAGCCTTAAAAGCAAGAA+TGG | + | chr3_4:52595074-52595093 | Msa0506290:intron | 35.0% | |
| !!! | GGATAAACAGCTTATTTTGC+AGG | + | chr3_4:52595559-52595578 | Msa0506290:intron | 35.0% |
| GTCTGATGTCATACCATATT+TGG | + | chr3_4:52595580-52595599 | Msa0506290:intron | 35.0% | |
| ACAACATATTCTCTGGCAAA+AGG | - | chr3_4:52595632-52595651 | Msa0506300:CDS | 35.0% | |
| AAACAGCAAGATACCACAAA+AGG | + | chr3_4:52595812-52595831 | Msa0506290:intron | 35.0% | |
| ACAAGCAGGCAAAGTAAAAA+TGG | + | chr3_4:52596035-52596054 | Msa0506290:intron | 35.0% | |
| CTAGAGCAAGAAATGAGATT+AGG | + | chr3_4:52596258-52596277 | Msa0506290:intron | 35.0% | |
| CCAAATAGAACTACGTGATA+TGG | + | chr3_4:52596669-52596688 | Msa0506310:CDS | 35.0% | |
| ! | CCATATCACGTAGTTCTATT+TGG | - | chr3_4:52596666-52596685 | Msa0506300:CDS | 35.0% |
| TTCTATCTTGGAAATTCTCG+TGG | - | chr3_4:52596823-52596842 | Msa0506300:intron | 35.0% | |
| ! | GAACTCGAATCTGTTGATTA+TGG | - | chr3_4:52596875-52596894 | Msa0506300:intron | 35.0% |
| ATCTCTATCGTAAAGCAACA+TGG | - | chr3_4:52596912-52596931 | Msa0506300:intron | 35.0% | |
| ! | AGCAACATGGATAGATTTTC+CGG | - | chr3_4:52596925-52596944 | Msa0506300:intron | 35.0% |
| ATATCAGTTGCTAGTGAATC+TGG | + | chr3_4:52596974-52596993 | Msa0506310:intron | 35.0% | |
| AACTGATATCAGTTTGCAGT+TGG | - | chr3_4:52596985-52597004 | Msa0506300:intron | 35.0% | |
| ACTGATATCAGTTTGCAGTT+GGG | - | chr3_4:52596986-52597005 | Msa0506300:intron | 35.0% | |
| CATCTAATACTGAATAGGTG+TGG | - | chr3_4:52597084-52597103 | Msa0506300:intron | 35.0% | |
| !! | ATCAAAAGGGTTGTTTTGTG+AGG | + | chr3_4:52597163-52597182 | None:intergenic | 35.0% |
| GTTCTTCACCCTTATCAAAA+GGG | + | chr3_4:52597176-52597195 | None:intergenic | 35.0% | |
| AGTTCTTCACCCTTATCAAA+AGG | + | chr3_4:52597177-52597196 | None:intergenic | 35.0% | |
| CATGAAAAATTGGCGTTTAC+AGG | + | chr3_4:52597329-52597348 | None:intergenic | 35.0% | |
| ! | GAATGACATGAAGGTACATA+TGG | - | chr3_4:52597412-52597431 | Msa0506300:intron | 35.0% |
| CACTATTTACTGGGAAAAGA+TGG | - | chr3_4:52597550-52597569 | Msa0506300:intron | 35.0% | |
| TAGTATTTGGCAATAGCTAG+TGG | + | chr3_4:52597668-52597687 | None:intergenic | 35.0% | |
| ATTGCCAAATACTACAGTGA+AGG | - | chr3_4:52597674-52597693 | Msa0506300:intron | 35.0% | |
| GTCTGAACATTTCAAACAGT+TGG | - | chr3_4:52597724-52597743 | Msa0506300:intron | 35.0% | |
| TGAACATTTCAAACAGTTGG+AGG | - | chr3_4:52597727-52597746 | Msa0506300:intron | 35.0% | |
| ! | ACTTTTATGCGAAGACTTGA+AGG | - | chr3_4:52597871-52597890 | Msa0506300:intron | 35.0% |
| ! | CTTTTATGCGAAGACTTGAA+GGG | - | chr3_4:52597872-52597891 | Msa0506300:intron | 35.0% |
| ! | GTATGTTTATGGGTTACTCA+AGG | - | chr3_4:52597943-52597962 | Msa0506300:intron | 35.0% |
| AACAAACTTGTGAATTTGGG+AGG | - | chr3_4:52598193-52598212 | Msa0506300:CDS | 35.0% | |
| ! | GTTGGGATTGTTAAGTTTTG+TGG | - | chr3_4:52598263-52598282 | Msa0506300:CDS | 35.0% |
| GTTAGGATCAGAGAATTTCT+GGG | + | chr3_4:52598538-52598557 | None:intergenic | 35.0% | |
| ! | GCCGATTTAATAAATCTAGG+TGG | + | chr3_4:52598720-52598739 | None:intergenic | 35.0% |
| CCAAAATGTCAGATATTTGC+AGG | + | chr3_4:52598761-52598780 | None:intergenic | 35.0% | |
| ! | CCTGCAAATATCTGACATTT+TGG | - | chr3_4:52598758-52598777 | Msa0506300:intron | 35.0% |
| !! | GATTTTAGTCCCTCAAAATG+AGG | - | chr3_4:52598920-52598939 | Msa0506300:intron | 35.0% |
| !!! | GAATATTTGGTTTTGGTCCT+TGG | + | chr3_4:52599012-52599031 | None:intergenic | 35.0% |
| !! | ATTGCAAAGAAGGGTACTAA+GGG | + | chr3_4:52599214-52599233 | None:intergenic | 35.0% |
| ! | TTTTCTTGCAGATTTAGCAG+TGG | - | chr3_4:52594917-52594936 | Msa0506300:three_prime_UTR | 35.0% |
| !! | ACGATGGTATTGATCTTTCT+TGG | - | chr3_4:52599553-52599572 | Msa0506300:intron | 35.0% |
| GTCCTGTTAACAGAGAAATT+TGG | + | chr3_4:52599723-52599742 | None:intergenic | 35.0% | |
| TATATCCAAACACCACTGTT+GGG | + | chr3_4:52599964-52599983 | None:intergenic | 35.0% | |
| TTATATCCAAACACCACTGT+TGG | + | chr3_4:52599965-52599984 | None:intergenic | 35.0% | |
| ! | CTAAAGGGAACTTCTTTTCA+AGG | + | chr3_4:52600263-52600282 | None:intergenic | 35.0% |
| ACAGCAACATACAGACTAAA+GGG | + | chr3_4:52600278-52600297 | None:intergenic | 35.0% | |
| AACAGCAACATACAGACTAA+AGG | + | chr3_4:52600279-52600298 | None:intergenic | 35.0% | |
| AATCATGTGAGCAAAACAAC+AGG | + | chr3_4:52600364-52600383 | None:intergenic | 35.0% | |
| ATCAGACTATCAGAGATGTT+TGG | - | chr3_4:52600416-52600435 | Msa0506300:CDS | 35.0% | |
| ! | TCAAGTACTTTTCACAAGTG+AGG | + | chr3_4:52600457-52600476 | None:intergenic | 35.0% |
| !! | TCACTTGTGAAAAGTACTTG+AGG | - | chr3_4:52600456-52600475 | Msa0506300:CDS | 35.0% |
| !! | TGAAAAGTACTTGAGGAGTA+GGG | - | chr3_4:52600463-52600482 | Msa0506300:CDS | 35.0% |
| ! | AATGGTGTTTGAGATAGTAG+TGG | - | chr3_4:52600532-52600551 | Msa0506300:intron | 35.0% |
| ! | TGTTTGAGATAGTAGTGGAA+GGG | - | chr3_4:52600537-52600556 | Msa0506300:intron | 35.0% |
| TTGTTACATAAGGGATTGCA+GGG | + | chr3_4:52601096-52601115 | None:intergenic | 35.0% | |
| ATTGTTACATAAGGGATTGC+AGG | + | chr3_4:52601097-52601116 | None:intergenic | 35.0% | |
| CCATGTCCAGTAAAAATCAA+CGG | + | chr3_4:52601157-52601176 | Msa0506320:CDS | 35.0% | |
| ! | ATTTTTACTGGACATGGTCT+CGG | - | chr3_4:52601160-52601179 | Msa0506300:CDS | 35.0% |
| ! | GATTTTGTAATGAAGAGCCT+TGG | + | chr3_4:52601370-52601389 | Msa0506320:CDS | 35.0% |
| ! | ACCAGTAATTACATGCCTTT+TGG | - | chr3_4:52601400-52601419 | Msa0506300:intron | 35.0% |
| ! | TCCAAAAGGCATGTAATTAC+TGG | + | chr3_4:52601404-52601423 | Msa0506320:CDS | 35.0% |
| TTCTATCTTGGAAATTCTCG+TGG | - | chr3_4:52596823-52596842 | Msa0506300:intron | 35.0% | |
| ! | ATTAGTCATGTTTTCAGCCT+GGG | + | chr3_4:52601596-52601615 | None:intergenic | 35.0% |
| ! | TATTAGTCATGTTTTCAGCC+TGG | + | chr3_4:52601597-52601616 | None:intergenic | 35.0% |
| GGCTGAAAACATGACTAATA+AGG | - | chr3_4:52601597-52601616 | Msa0506300:intron | 35.0% | |
| AATAAGGATTCACTAGCAAC+TGG | - | chr3_4:52601613-52601632 | Msa0506300:intron | 35.0% | |
| TATTCACTTACCTGCATATG+TGG | + | chr3_4:52601673-52601692 | None:intergenic | 35.0% | |
| TATCTAATACTCAGTAGGTG+TGG | - | chr3_4:52601713-52601732 | Msa0506300:intron | 35.0% | |
| ACGTCATTCAATTTCTTGGA+TGG | + | chr3_4:52602137-52602156 | None:intergenic | 35.0% | |
| CTTCACGTCATTCAATTTCT+TGG | + | chr3_4:52602141-52602160 | None:intergenic | 35.0% | |
| CAAGAAATTGAATGACGTGA+AGG | - | chr3_4:52602139-52602158 | Msa0506300:intron | 35.0% | |
| ! | CCTTTTTGTACCATTCAAGT+TGG | + | chr3_4:52602175-52602194 | None:intergenic | 35.0% |
| CCAACTTGAATGGTACAAAA+AGG | - | chr3_4:52597436-52597455 | Msa0506300:intron | 35.0% | |
| ! | AGTAGATGGTGAGCTTTTTA+TGG | + | chr3_4:52602277-52602296 | None:intergenic | 35.0% |
| ATAAAAAGCTCACCATCTAC+TGG | - | chr3_4:52602276-52602295 | Msa0506300:intron | 35.0% | |
| TAAAAAGCTCACCATCTACT+GGG | - | chr3_4:52602277-52602296 | Msa0506300:intron | 35.0% | |
| CAGATGAAACCTCAAAAAGA+AGG | - | chr3_4:52602320-52602339 | Msa0506300:intron | 35.0% | |
| GCTGAATACTATAGAAAAGG+CGG | - | chr3_4:52602413-52602432 | Msa0506300:intron | 35.0% | |
| GTCTAAACACTTCAAACAGT+TGG | - | chr3_4:52602460-52602479 | Msa0506300:intron | 35.0% | |
| TAAACACTTCAAACAGTTGG+AGG | - | chr3_4:52602463-52602482 | Msa0506300:intron | 35.0% | |
| CAATACACGTAGAAAGAATG+TGG | - | chr3_4:52602523-52602542 | Msa0506300:intron | 35.0% | |
| ! | TGACTACAGATTCTTGCTTT+TGG | - | chr3_4:52602555-52602574 | Msa0506300:intron | 35.0% |
| !! | GACTACAGATTCTTGCTTTT+GGG | - | chr3_4:52602556-52602575 | Msa0506300:intron | 35.0% |
| CTTTGCGCTAGAAAAATATC+TGG | + | chr3_4:52602710-52602729 | None:intergenic | 35.0% | |
| ACATAGAGAATACACTTCAG+GGG | + | chr3_4:52602856-52602875 | None:intergenic | 35.0% | |
| ACAGAATCATAATTGTTCGG+AGG | + | chr3_4:52602951-52602970 | None:intergenic | 35.0% | |
| !! | ATGATGATTTGCTTCAAGGT+TGG | - | chr3_4:52603004-52603023 | Msa0506300:intron | 35.0% |
| ! | ATTGGTCTCTGATTATCAAC+AGG | + | chr3_4:52603153-52603172 | None:intergenic | 35.0% |
| GTCCATTTGTATTTGTACCT+TGG | - | chr3_4:52603226-52603245 | Msa0506300:five_prime_UTR | 35.0% | |
| TTGTACCTTGGAAACATCTT+TGG | - | chr3_4:52603238-52603257 | Msa0506300:five_prime_UTR | 35.0% | |
| ATCTTCCAAAGATGTTTCCA+AGG | + | chr3_4:52603246-52603265 | None:intergenic | 35.0% | |
| TGTGTCATAGTGAACTTGGT+TGG | + | chr3_4:52594768-52594787 | Msa0506290:intron | 40.0% | |
| TGAAAAAGTCATGCATGGCA+TGG | + | chr3_4:52594829-52594848 | Msa0506290:intron | 40.0% | |
| ! | AGTCCATGATTTGCAAAGGA+TGG | + | chr3_4:52594975-52594994 | Msa0506290:intron | 40.0% |
| ! | AAGATGGTGTTGGACTTTCT+TGG | - | chr3_4:52595017-52595036 | Msa0506300:three_prime_UTR | 40.0% |
| TTCCAGTGTTCAAGCTGATT+TGG | - | chr3_4:52595093-52595112 | Msa0506300:CDS | 40.0% | |
| AACCAAATCAGCTTGAACAC+TGG | + | chr3_4:52595098-52595117 | Msa0506290:intron | 40.0% | |
| GGTTTCTTCTGCTGAACTTA+AGG | - | chr3_4:52595114-52595133 | Msa0506300:CDS | 40.0% | |
| TTCTTCTGCTGAACTTAAGG+AGG | - | chr3_4:52595117-52595136 | Msa0506300:CDS | 40.0% | |
| AAAATCACCAGGAGCTTGAT+AGG | - | chr3_4:52595224-52595243 | Msa0506300:CDS | 40.0% | |
| ! | TTTTCAACCTATCAAGCTCC+TGG | + | chr3_4:52595234-52595253 | Msa0506290:intron | 40.0% |
| ! | GCTTGATAGGTTGAAAACTG+AGG | - | chr3_4:52595237-52595256 | Msa0506300:CDS | 40.0% |
| TGTGAGGTTAAACAAGCTCA+AGG | + | chr3_4:52595709-52595728 | Msa0506290:intron | 40.0% | |
| !! | CAAGTTGGCACTTTTCTTCA+AGG | + | chr3_4:52595859-52595878 | Msa0506290:intron | 40.0% |
| !! | CTTGAAGAAAAGTGCCAACT+TGG | - | chr3_4:52595857-52595876 | Msa0506300:intron | 40.0% |
| CCAACTTGGATCGATAGTTT+GGG | - | chr3_4:52595871-52595890 | Msa0506300:intron | 40.0% | |
| AAGTATGGTGTTTGTGATGG+TGG | - | chr3_4:52595991-52596010 | Msa0506300:intron | 40.0% | |
| ! | TGGTGAGTTGCTGTTGTATT+TGG | - | chr3_4:52596066-52596085 | Msa0506300:intron | 40.0% |
| ATACGAGCTAGAAATGAGCT+TGG | + | chr3_4:52596154-52596173 | Msa0506290:intron | 40.0% | |
| GTGTATCTGCTTCATTGCTT+TGG | - | chr3_4:52596192-52596211 | Msa0506300:intron | 40.0% | |
| AGTACGAGTATGGTAGAATG+CGG | + | chr3_4:52596402-52596421 | Msa0506290:CDS | 40.0% | |
| CTAGATGCATAGTACGAGTA+TGG | + | chr3_4:52596412-52596431 | Msa0506290:CDS | 40.0% | |
| ! | GTAACAATCAATGGACTCTG+TGG | + | chr3_4:52596512-52596531 | None:intergenic | 40.0% |
| ! | CAGAGTCCATTGATTGTTAC+TGG | - | chr3_4:52596512-52596531 | Msa0506300:CDS | 40.0% |
| CCATGTCCAGTAACAATCAA+TGG | + | chr3_4:52596521-52596540 | Msa0506310:CDS | 40.0% | |
| ! | CCATTGATTGTTACTGGACA+TGG | - | chr3_4:52596518-52596537 | Msa0506300:CDS | 40.0% |
| TAATGAAGAGCCTTGGAAGT+GGG | + | chr3_4:52596727-52596746 | Msa0506310:CDS | 40.0% | |
| ! | ACCAGTATCTACATGCCTTT+TGG | - | chr3_4:52596755-52596774 | Msa0506300:intron | 40.0% |
| ! | TCCAAAAGGCATGTAGATAC+TGG | + | chr3_4:52596759-52596778 | Msa0506310:intron | 40.0% |
| CTGATATCAGTTTGCAGTTG+GGG | - | chr3_4:52596987-52597006 | Msa0506300:intron | 40.0% | |
| TGATATCAGTTTGCAGTTGG+GGG | - | chr3_4:52596988-52597007 | Msa0506300:intron | 40.0% | |
| AACCATTCCACTTACAAGCT+CGG | + | chr3_4:52597130-52597149 | None:intergenic | 40.0% | |
| GCTTGTAAGTGGAATGGTTA+AGG | - | chr3_4:52597131-52597150 | Msa0506300:intron | 40.0% | |
| CAAATGATATCGTCTTCTGC+AGG | + | chr3_4:52597376-52597395 | None:intergenic | 40.0% | |
| TACATATGGCCCAACTTGAA+TGG | - | chr3_4:52597426-52597445 | Msa0506300:intron | 40.0% | |
| CAATTGACCATGATGCTGTT+GGG | - | chr3_4:52597513-52597532 | Msa0506300:intron | 40.0% | |
| ! | TTTCGTACCCGTTGGTTATA+TGG | - | chr3_4:52597614-52597633 | Msa0506300:intron | 40.0% |
| TAGTCCCTCCATATAACCAA+CGG | + | chr3_4:52597625-52597644 | None:intergenic | 40.0% | |
| AGGGACTACTTACAGAAGAA+TGG | - | chr3_4:52597637-52597656 | Msa0506300:intron | 40.0% | |
| ACCACCTTCACTGTAGTATT+TGG | + | chr3_4:52597681-52597700 | None:intergenic | 40.0% | |
| ATTTCAAACAGTTGGAGGAG+TGG | - | chr3_4:52597732-52597751 | Msa0506300:intron | 40.0% | |
| TTCGTGCCAGAAATATCTCA+GGG | + | chr3_4:52597982-52598001 | None:intergenic | 40.0% | |
| TCAATACTCACTTCTGCACT+AGG | + | chr3_4:52598438-52598457 | None:intergenic | 40.0% | |
| TCAAGGACTAGATCAAGAGA+TGG | + | chr3_4:52598509-52598528 | None:intergenic | 40.0% | |
| GGTTAGGATCAGAGAATTTC+TGG | + | chr3_4:52598539-52598558 | None:intergenic | 40.0% | |
| !! | GAGTAGGAATTTCTGAGGTT+AGG | + | chr3_4:52598555-52598574 | None:intergenic | 40.0% |
| ! | CAAACTCGCTCTTTAAGAGT+AGG | + | chr3_4:52598571-52598590 | None:intergenic | 40.0% |
| ! | CGAGTTTGCGAGTTACATTT+TGG | - | chr3_4:52598583-52598602 | Msa0506300:intron | 40.0% |
| CAAAACGCCAGATATTTGCA+GGG | - | chr3_4:52599082-52599101 | Msa0506300:intron | 40.0% | |
| AAATGGTCCCTGCAAATATC+TGG | + | chr3_4:52599092-52599111 | None:intergenic | 40.0% | |
| !! | TGTTGACTTTACTCCACCTT+GGG | - | chr3_4:52599184-52599203 | Msa0506300:intron | 40.0% |
| !! | CATTGCAAAGAAGGGTACTA+AGG | + | chr3_4:52599215-52599234 | None:intergenic | 40.0% |
| !! | GTTGAAGGCATTGCAAAGAA+GGG | + | chr3_4:52599223-52599242 | None:intergenic | 40.0% |
| !! | AGTTGAAGGCATTGCAAAGA+AGG | + | chr3_4:52599224-52599243 | None:intergenic | 40.0% |
| ! | GAAGATATCGTTTGGAACGA+TGG | - | chr3_4:52599537-52599556 | Msa0506300:intron | 40.0% |
| ACTCTTTCGTGATGATCATC+AGG | - | chr3_4:52599752-52599771 | Msa0506300:intron | 40.0% | |
| AGTCTCCACTAAAATCCGTT+GGG | + | chr3_4:52600014-52600033 | None:intergenic | 40.0% | |
| ! | CAATCTCGCTAAGTCAGTTT+TGG | + | chr3_4:52600080-52600099 | None:intergenic | 40.0% |
| !! | GTGAAAAGTACTTGAGGAGT+AGG | - | chr3_4:52600462-52600481 | Msa0506300:CDS | 40.0% |
| !! | GAAAAGTACTTGAGGAGTAG+GGG | - | chr3_4:52600464-52600483 | Msa0506300:CDS | 40.0% |
| ! | GTGTTTGAGATAGTAGTGGA+AGG | - | chr3_4:52600536-52600555 | Msa0506300:intron | 40.0% |
| AACTAGAGCAACTCTGTAGA+TGG | + | chr3_4:52600743-52600762 | None:intergenic | 40.0% | |
| AAGACTATAGCAAGAAGGTC+AGG | + | chr3_4:52600891-52600910 | None:intergenic | 40.0% | |
| TGCAGAAGACTATAGCAAGA+AGG | + | chr3_4:52600896-52600915 | None:intergenic | 40.0% | |
| GTATCTAGGCTTCTCTTTCT+AGG | - | chr3_4:52601057-52601076 | Msa0506300:CDS | 40.0% | |
| AATCAACGGAGTCGATAGAT+TGG | + | chr3_4:52601143-52601162 | None:intergenic | 40.0% | |
| !!! | TCGACTCCGTTGATTTTTAC+TGG | - | chr3_4:52601148-52601167 | Msa0506300:CDS | 40.0% |
| !!! | CCGTTGATTTTTACTGGACA+TGG | - | chr3_4:52601154-52601173 | Msa0506300:CDS | 40.0% |
| AATCTCCTATCACCAACAAG+GGG | + | chr3_4:52601274-52601293 | Msa0506320:CDS | 40.0% | |
| CAATCTCCTATCACCAACAA+GGG | + | chr3_4:52601275-52601294 | Msa0506320:CDS | 40.0% | |
| TAATGAAGAGCCTTGGAAGT+GGG | + | chr3_4:52596727-52596746 | Msa0506310:CDS | 40.0% | |
| TGAGAACCCAGATTCTATCT+TGG | - | chr3_4:52601456-52601475 | Msa0506300:intron | 40.0% | |
| !! | TGGTATTAGTTTGCAGTTGC+AGG | - | chr3_4:52601633-52601652 | Msa0506300:intron | 40.0% |
| TATGGAACTAATCGTCAGTC+TGG | + | chr3_4:52601831-52601850 | None:intergenic | 40.0% | |
| ACACAATGTCGAAGCTTGTA+GGG | - | chr3_4:52601857-52601876 | Msa0506300:intron | 40.0% | |
| TCGAAGCTTGTAGGGATAAT+CGG | - | chr3_4:52601865-52601884 | Msa0506300:intron | 40.0% | |
| ! | GAATGACGTGAAGGTACATA+TGG | - | chr3_4:52602148-52602167 | Msa0506300:intron | 40.0% |
| TACATATGGCCCAACTTGAA+TGG | - | chr3_4:52597426-52597445 | Msa0506300:intron | 40.0% | |
| CTACAAAAACATGAGCTCAC+TGG | - | chr3_4:52602229-52602248 | Msa0506300:intron | 40.0% | |
| TATGGAACTCAGCAACATCA+CGG | + | chr3_4:52602259-52602278 | None:intergenic | 40.0% | |
| ! | AACCATTTTCTCCCAGTAGA+TGG | + | chr3_4:52602291-52602310 | None:intergenic | 40.0% |
| ! | AAAGCTGCACCTTCTTTTTG+AGG | + | chr3_4:52602332-52602351 | None:intergenic | 40.0% |
| ! | TTTCGTACCCGTTGGTTATA+TGG | - | chr3_4:52597614-52597633 | Msa0506300:intron | 40.0% |
| TAGTCCCACCATATAACCAA+CGG | + | chr3_4:52602361-52602380 | None:intergenic | 40.0% | |
| ! | TATATGGTGGGACTACTTAC+AGG | - | chr3_4:52602366-52602385 | Msa0506300:intron | 40.0% |
| ACTTCAAACAGTTGGAGGAA+TGG | - | chr3_4:52602468-52602487 | Msa0506300:intron | 40.0% | |
| TACACGTAGAAAGAATGTGG+AGG | - | chr3_4:52602526-52602545 | Msa0506300:intron | 40.0% | |
| AAAGCAGCTATATTCGTTGG+TGG | - | chr3_4:52602726-52602745 | Msa0506300:CDS | 40.0% | |
| ! | CCATGATTTGCAAAGGATGG+TGG | + | chr3_4:52594972-52594991 | Msa0506290:intron | 45.0% |
| CCACCATCCTTTGCAAATCA+TGG | - | chr3_4:52594969-52594988 | Msa0506300:three_prime_UTR | 45.0% | |
| ACTCTTTCGCGAAAATCACC+AGG | - | chr3_4:52595213-52595232 | Msa0506300:CDS | 45.0% | |
| GCCAACTTGGATCGATAGTT+TGG | - | chr3_4:52595870-52595889 | Msa0506300:intron | 45.0% | |
| CCCAAACTATCGATCCAAGT+TGG | + | chr3_4:52595874-52595893 | Msa0506290:intron | 45.0% | |
| ! | ATGGTGGAAATCCTCAGTTC+TGG | - | chr3_4:52596007-52596026 | Msa0506300:intron | 45.0% |
| TGGTGGAAATCCTCAGTTCT+GGG | - | chr3_4:52596008-52596027 | Msa0506300:intron | 45.0% | |
| TAAAAATGGCCCCAGAACTG+AGG | + | chr3_4:52596021-52596040 | Msa0506290:intron | 45.0% | |
| CCAACAAAGGATACACAAGC+AGG | + | chr3_4:52596049-52596068 | Msa0506290:intron | 45.0% | |
| CCTGCTTGTGTATCCTTTGT+TGG | - | chr3_4:52596046-52596065 | Msa0506300:intron | 45.0% | |
| CAACAGCAACTCACCAACAA+AGG | + | chr3_4:52596062-52596081 | Msa0506290:intron | 45.0% | |
| ATGAGCTTGGCTGGCAAAAT+AGG | + | chr3_4:52596141-52596160 | Msa0506290:intron | 45.0% | |
| TACGAGTATGGTAGAATGCG+GGG | + | chr3_4:52596400-52596419 | Msa0506290:CDS | 45.0% | |
| GTACGAGTATGGTAGAATGC+GGG | + | chr3_4:52596401-52596420 | Msa0506290:CDS | 45.0% | |
| ATTGTTACTGGACATGGCCT+CGG | - | chr3_4:52596524-52596543 | Msa0506300:CDS | 45.0% | |
| AACCAAAGGTAATGCAGAGC+GGG | + | chr3_4:52596613-52596632 | Msa0506310:CDS | 45.0% | |
| GAACCAAAGGTAATGCAGAG+CGG | + | chr3_4:52596614-52596633 | Msa0506310:CDS | 45.0% | |
| AATCTCCTGTCACCAACAAG+GGG | + | chr3_4:52596638-52596657 | Msa0506310:CDS | 45.0% | |
| CAATCTCCTGTCACCAACAA+GGG | + | chr3_4:52596639-52596658 | Msa0506310:CDS | 45.0% | |
| GTAATGAAGAGCCTTGGAAG+TGG | + | chr3_4:52596728-52596747 | Msa0506310:CDS | 45.0% | |
| CGATCTGTAATGAAGAGCCT+TGG | + | chr3_4:52596734-52596753 | Msa0506310:CDS | 45.0% | |
| CGAGAACCCGAATTCTATCT+TGG | - | chr3_4:52596811-52596830 | Msa0506300:intron | 45.0% | |
| CTTGGAAATTCTCGTGGCAT+TGG | - | chr3_4:52596829-52596848 | Msa0506300:intron | 45.0% | |
| ! | GTCAAGTTTTCAGCTTGAGC+CGG | + | chr3_4:52596947-52596966 | Msa0506310:intron | 45.0% |
| AAGTTTGACACCACGTATGC+AGG | - | chr3_4:52597015-52597034 | Msa0506300:intron | 45.0% | |
| TATTCACCTACCTGCATACG+TGG | + | chr3_4:52597028-52597047 | Msa0506310:CDS | 45.0% | |
| CAGCATCATGGTCAATTGGT+TGG | + | chr3_4:52597511-52597530 | None:intergenic | 45.0% | |
| CCAACAGCATCATGGTCAAT+TGG | + | chr3_4:52597515-52597534 | None:intergenic | 45.0% | |
| CCAATTGACCATGATGCTGT+TGG | - | chr3_4:52597512-52597531 | Msa0506300:intron | 45.0% | |
| TATGGAACCCAACAGCATCA+TGG | + | chr3_4:52597523-52597542 | None:intergenic | 45.0% | |
| GAGATGAAGCCACAAAGAGA+AGG | - | chr3_4:52597584-52597603 | Msa0506300:intron | 45.0% | |
| AAAGCTGCACCTTCTCTTTG+TGG | + | chr3_4:52597596-52597615 | None:intergenic | 45.0% | |
| ! | GTACCCGTTGGTTATATGGA+GGG | - | chr3_4:52597618-52597637 | Msa0506300:intron | 45.0% |
| AGTCCCTCCATATAACCAAC+GGG | + | chr3_4:52597624-52597643 | None:intergenic | 45.0% | |
| GCCAAATACTACAGTGAAGG+TGG | - | chr3_4:52597677-52597696 | Msa0506300:intron | 45.0% | |
| ACAGTTGGAGGAGTGGTTAT+TGG | - | chr3_4:52597739-52597758 | Msa0506300:intron | 45.0% | |
| ! | CTTTTGGGCACATGTTGAAG+AGG | - | chr3_4:52597844-52597863 | Msa0506300:intron | 45.0% |
| AGTGTCCCCTGAGATATTTC+TGG | - | chr3_4:52597973-52597992 | Msa0506300:intron | 45.0% | |
| TCGTGCCAGAAATATCTCAG+GGG | + | chr3_4:52597981-52598000 | None:intergenic | 45.0% | |
| CTTCGTGCCAGAAATATCTC+AGG | + | chr3_4:52597983-52598002 | None:intergenic | 45.0% | |
| ACTTGTGAATTTGGGAGGAG+TGG | - | chr3_4:52598198-52598217 | Msa0506300:CDS | 45.0% | |
| ! | CCTGCAAATATCTGGCGTTT+TGG | + | chr3_4:52599084-52599103 | None:intergenic | 45.0% |
| CCAAAACGCCAGATATTTGC+AGG | - | chr3_4:52599081-52599100 | Msa0506300:intron | 45.0% | |
| !! | GTGTTGACTTTACTCCACCT+TGG | - | chr3_4:52599183-52599202 | Msa0506300:intron | 45.0% |
| CTGTGTCATGCTGAAGTTCT+TGG | + | chr3_4:52599290-52599309 | None:intergenic | 45.0% | |
| !! | CTCACCTCACAAGGTTTTGT+GGG | + | chr3_4:52599890-52599909 | None:intergenic | 45.0% |
| TTCCCACTATCAACCGATGA+GGG | - | chr3_4:52599915-52599934 | Msa0506300:CDS | 45.0% | |
| ! | TGCGTTAAAGTGTCCCTCAT+CGG | + | chr3_4:52599931-52599950 | None:intergenic | 45.0% |
| GAGTCTCCACTAAAATCCGT+TGG | + | chr3_4:52600015-52600034 | None:intergenic | 45.0% | |
| !! | TCTCGCTAAGTCAGTTTTGG+CGG | + | chr3_4:52600077-52600096 | None:intergenic | 45.0% |
| CTACAGAGTTGCTCTAGTTG+AGG | - | chr3_4:52600744-52600763 | Msa0506300:intron | 45.0% | |
| GTGCATCTGCATCATTGCTT+CGG | - | chr3_4:52600826-52600845 | Msa0506300:intron | 45.0% | |
| GAACCAAATGTGATGCAGAG+TGG | + | chr3_4:52601250-52601269 | Msa0506320:CDS | 45.0% | |
| ! | ACATTTGGTTCACCCCTTGT+TGG | - | chr3_4:52601259-52601278 | Msa0506300:CDS | 45.0% |
| GCAATCTCCTATCACCAACA+AGG | + | chr3_4:52601276-52601295 | Msa0506320:CDS | 45.0% | |
| GTAATGAAGAGCCTTGGAAG+TGG | + | chr3_4:52596728-52596747 | Msa0506310:CDS | 45.0% | |
| CTTGGAAATTCTCGTGGCAT+TGG | - | chr3_4:52596829-52596848 | Msa0506300:intron | 45.0% | |
| ! | ATGCTTAGGTTTTTCCACCC+AGG | - | chr3_4:52601576-52601595 | Msa0506300:intron | 45.0% |
| AGTTTGCAGTTGCAGGAACT+AGG | - | chr3_4:52601640-52601659 | Msa0506300:intron | 45.0% | |
| AGGATTGACACCACATATGC+AGG | - | chr3_4:52601660-52601679 | Msa0506300:intron | 45.0% | |
| ! | ATCTAAAGGGTGGTTCTGTG+GGG | + | chr3_4:52601777-52601796 | None:intergenic | 45.0% |
| ! | CATCTAAAGGGTGGTTCTGT+GGG | + | chr3_4:52601778-52601797 | None:intergenic | 45.0% |
| CACAGAACCACCCTTTAGAT+GGG | - | chr3_4:52601777-52601796 | Msa0506300:intron | 45.0% | |
| ACAGAACCACCCTTTAGATG+GGG | - | chr3_4:52601778-52601797 | Msa0506300:intron | 45.0% | |
| ! | CTGACGATTAGTTCCATAGC+CGG | - | chr3_4:52601833-52601852 | Msa0506300:intron | 45.0% |
| CACACAATGTCGAAGCTTGT+AGG | - | chr3_4:52601856-52601875 | Msa0506300:intron | 45.0% | |
| CGAAGCTTGTAGGGATAATC+GGG | - | chr3_4:52601866-52601885 | Msa0506300:intron | 45.0% | |
| GAAGCTTGTAGGGATAATCG+GGG | - | chr3_4:52601867-52601886 | Msa0506300:intron | 45.0% | |
| CACCATCTACTGGGAGAAAA+TGG | - | chr3_4:52602286-52602305 | Msa0506300:intron | 45.0% | |
| ! | GTACCCGTTGGTTATATGGT+GGG | - | chr3_4:52602354-52602373 | Msa0506300:intron | 45.0% |
| AGTCCCACCATATAACCAAC+GGG | + | chr3_4:52602360-52602379 | None:intergenic | 45.0% | |
| TGGGACTACTTACAGGAGAA+TGG | - | chr3_4:52602373-52602392 | Msa0506300:intron | 45.0% | |
| ACAGTTGGAGGAATGGTTGA+TGG | - | chr3_4:52602475-52602494 | Msa0506300:intron | 45.0% | |
| CAGTTGGAGGAATGGTTGAT+GGG | - | chr3_4:52602476-52602495 | Msa0506300:intron | 45.0% | |
| ! | CTTTTGGGCACATGTTGAAG+AGG | - | chr3_4:52597844-52597863 | Msa0506300:intron | 45.0% |
| CGCAAAGCAGCTATATTCGT+TGG | - | chr3_4:52602723-52602742 | Msa0506300:CDS | 45.0% | |
| !!! | TTTTTTATATAAAAAAATCT+AGG | + | chr3_4:52598693-52598712 | None:intergenic | 5.0% |
| !! | AAAATTAAAACAAAAATTAA+GGG | - | chr3_4:52600230-52600249 | Msa0506300:CDS | 5.0% |
| CAGACTCTGTCCACACACTA+AGG | - | chr3_4:52595595-52595614 | Msa0506300:CDS | 50.0% | |
| GGTGGAAATCCTCAGTTCTG+GGG | - | chr3_4:52596009-52596028 | Msa0506300:intron | 50.0% | |
| TGGCTGGCAAAATAGGAACG+CGG | + | chr3_4:52596134-52596153 | Msa0506290:intron | 50.0% | |
| GAGCTAGAAATGAGCTTGGC+TGG | + | chr3_4:52596150-52596169 | Msa0506290:intron | 50.0% | |
| GAGAAGCAATTGATCCTCCG+AGG | + | chr3_4:52596544-52596563 | Msa0506310:CDS | 50.0% | |
| ! | ACCTTTGGTTCACCCCTTGT+TGG | - | chr3_4:52596623-52596642 | Msa0506300:CDS | 50.0% |
| ACCAACAAGGGGTGAACCAA+AGG | + | chr3_4:52596627-52596646 | Msa0506310:CDS | 50.0% | |
| GCAATCTCCTGTCACCAACA+AGG | + | chr3_4:52596640-52596659 | Msa0506310:CDS | 50.0% | |
| CTTGGAAGTGGGTCTTTGTG+TGG | + | chr3_4:52596716-52596735 | Msa0506310:CDS | 50.0% | |
| CACACAAAGACCCACTTCCA+AGG | - | chr3_4:52596714-52596733 | Msa0506300:CDS | 50.0% | |
| TTGACACCACGTATGCAGGT+AGG | - | chr3_4:52597019-52597038 | Msa0506300:intron | 50.0% | |
| !! | AGCTCGGTGTCTGTTCTCAA+TGG | + | chr3_4:52597114-52597133 | None:intergenic | 50.0% |
| ACAGACACCGAGCTTGTAAG+TGG | - | chr3_4:52597120-52597139 | Msa0506300:intron | 50.0% | |
| CACCGAGCTTGTAAGTGGAA+TGG | - | chr3_4:52597125-52597144 | Msa0506300:intron | 50.0% | |
| ! | CGTACCCGTTGGTTATATGG+AGG | - | chr3_4:52597617-52597636 | Msa0506300:intron | 50.0% |
| CAGCACACACAGCAAGAATG+TGG | - | chr3_4:52597796-52597815 | Msa0506300:intron | 50.0% | |
| CACGAAGCAGCTACAATCGT+TGG | - | chr3_4:52597996-52598015 | Msa0506300:intron | 50.0% | |
| GAAGCAGCTACAATCGTTGG+TGG | - | chr3_4:52597999-52598018 | Msa0506300:intron | 50.0% | |
| GCACTAGGACAAGACTTGCA+AGG | + | chr3_4:52598423-52598442 | None:intergenic | 50.0% | |
| TACTAAGGGAAGACCCAAGG+TGG | + | chr3_4:52599200-52599219 | None:intergenic | 50.0% | |
| CAAGCCCACAAAACCTTGTG+AGG | - | chr3_4:52599883-52599902 | Msa0506300:CDS | 50.0% | |
| ! | CCTCACCTCACAAGGTTTTG+TGG | + | chr3_4:52599891-52599910 | None:intergenic | 50.0% |
| CCACAAAACCTTGTGAGGTG+AGG | - | chr3_4:52599888-52599907 | Msa0506300:CDS | 50.0% | |
| GGAACAATCCTCACCTCACA+AGG | + | chr3_4:52599899-52599918 | None:intergenic | 50.0% | |
| GTTCCCACTATCAACCGATG+AGG | - | chr3_4:52599914-52599933 | Msa0506300:CDS | 50.0% | |
| !! | GTCCCTCATCGGTTGATAGT+GGG | + | chr3_4:52599920-52599939 | None:intergenic | 50.0% |
| !! | TGTCCCTCATCGGTTGATAG+TGG | + | chr3_4:52599921-52599940 | None:intergenic | 50.0% |
| AAACACCACTGTTGGGTGTG+AGG | + | chr3_4:52599957-52599976 | None:intergenic | 50.0% | |
| TCACACCCAACAGTGGTGTT+TGG | - | chr3_4:52599956-52599975 | Msa0506300:CDS | 50.0% | |
| !! | GATGGCCCAACGGATTTTAG+TGG | - | chr3_4:52600006-52600025 | Msa0506300:CDS | 50.0% |
| !! | CTCGCTAAGTCAGTTTTGGC+GGG | + | chr3_4:52600076-52600095 | None:intergenic | 50.0% |
| TGTCATCACTCACACTGCTG+AGG | - | chr3_4:52600661-52600680 | Msa0506300:intron | 50.0% | |
| CGGTATAATACGGGGAAGCA+AGG | + | chr3_4:52601020-52601039 | None:intergenic | 50.0% | |
| CGTCCACTCTGCATCACATT+TGG | - | chr3_4:52601244-52601263 | Msa0506300:CDS | 50.0% | |
| !! | GTTCACCCCTTGTTGGTGAT+AGG | - | chr3_4:52601266-52601285 | Msa0506300:CDS | 50.0% |
| CACACAAAGACCCACTTCCA+AGG | - | chr3_4:52596714-52596733 | Msa0506300:CDS | 50.0% | |
| ! | AGTCATGTTTTCAGCCTGGG+TGG | + | chr3_4:52601593-52601612 | None:intergenic | 50.0% |
| GATCAAACCTTGTGCGTGCA+CGG | + | chr3_4:52601755-52601774 | None:intergenic | 50.0% | |
| ! | CCATCTAAAGGGTGGTTCTG+TGG | + | chr3_4:52601779-52601798 | None:intergenic | 50.0% |
| CCACAGAACCACCCTTTAGA+TGG | - | chr3_4:52601776-52601795 | Msa0506300:intron | 50.0% | |
| CAGAACCACCCTTTAGATGG+GGG | - | chr3_4:52601779-52601798 | Msa0506300:intron | 50.0% | |
| GATCCTCACCCCCATCTAAA+GGG | + | chr3_4:52601790-52601809 | None:intergenic | 50.0% | |
| AGATCCTCACCCCCATCTAA+AGG | + | chr3_4:52601791-52601810 | None:intergenic | 50.0% | |
| CAAGCTTCGACATTGTGTGC+CGG | + | chr3_4:52601855-52601874 | None:intergenic | 50.0% | |
| !! | ATTGACTTGGCAGCAGCAAC+AGG | - | chr3_4:52602028-52602047 | Msa0506300:intron | 50.0% |
| ! | CGTACCCGTTGGTTATATGG+TGG | - | chr3_4:52597617-52597636 | Msa0506300:intron | 50.0% |
| CCAAACAGGGCCTTAGTGTG+TGG | + | chr3_4:52595608-52595627 | Msa0506290:intron | 55.0% | |
| CCACACACTAAGGCCCTGTT+TGG | - | chr3_4:52595605-52595624 | Msa0506300:CDS | 55.0% | |
| !! | GTTCACCCCTTGTTGGTGAC+AGG | - | chr3_4:52596630-52596649 | Msa0506300:CDS | 55.0% |
| ! | GTGCAGCTTTTCGTACCCGT+TGG | - | chr3_4:52597606-52597625 | Msa0506300:intron | 55.0% |
| GGGTACTAAGGGAAGACCCA+AGG | + | chr3_4:52599203-52599222 | None:intergenic | 55.0% | |
| GTGGGTGACCTGATAGCAGA+TGG | - | chr3_4:52599988-52600007 | Msa0506300:CDS | 55.0% | |
| CCTGATAGCAGATGGCCCAA+CGG | - | chr3_4:52599996-52600015 | Msa0506300:CDS | 55.0% | |
| !! | GTGGCATTGGTCTCAGTCCA+TGG | - | chr3_4:52601487-52601506 | Msa0506300:intron | 55.0% |
| !! | TCGACATTGTGTGCCGGCTA+TGG | + | chr3_4:52601849-52601868 | None:intergenic | 55.0% |
| ! | GTGCAGCTTTTCGTACCCGT+TGG | - | chr3_4:52597606-52597625 | Msa0506300:intron | 55.0% |
| GTTACTGGACATGGCCTCGG+AGG | - | chr3_4:52596527-52596546 | Msa0506300:CDS | 60.0% | |
| CGCCCGCTCTGCATTACCTT+TGG | - | chr3_4:52596608-52596627 | Msa0506300:CDS | 60.0% | |
| CACCTCCTCACACCCAACAG+TGG | - | chr3_4:52599949-52599968 | Msa0506300:CDS | 60.0% | |
| CACCACTGTTGGGTGTGAGG+AGG | + | chr3_4:52599954-52599973 | None:intergenic | 60.0% | |
| CCGTTGGGCCATCTGCTATC+AGG | + | chr3_4:52599999-52600018 | None:intergenic | 60.0% | |
| GACAACACCGTGCACGCACA+AGG | - | chr3_4:52601745-52601764 | Msa0506300:intron | 60.0% | |
| CCTCACCCCCATCTAAAGGG+TGG | + | chr3_4:52601787-52601806 | None:intergenic | 60.0% | |
| CCACCCTTTAGATGGGGGTG+AGG | - | chr3_4:52601784-52601803 | Msa0506300:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 52594620 | 52603276 | 52594620 | ID=Msa0506300;Name=Msa0506300 |
| chr3_4 | mRNA | 52594620 | 52603276 | 52594620 | ID=Msa0506300-mRNA-1;Parent=Msa0506300;Name=Msa0506300-mRNA-1;_AED=0.15;_eAED=0.15;_QI=125|0.87|0.88|1|0.75|0.55|9|312|1110 |
| chr3_4 | exon | 52594620 | 52594669 | 52594620 | ID=Msa0506300-mRNA-1:exon:11525;Parent=Msa0506300-mRNA-1 |
| chr3_4 | exon | 52594775 | 52595855 | 52594775 | ID=Msa0506300-mRNA-1:exon:11524;Parent=Msa0506300-mRNA-1 |
| chr3_4 | exon | 52596215 | 52596769 | 52596215 | ID=Msa0506300-mRNA-1:exon:11523;Parent=Msa0506300-mRNA-1 |
| chr3_4 | exon | 52598099 | 52598444 | 52598099 | ID=Msa0506300-mRNA-1:exon:11522;Parent=Msa0506300-mRNA-1 |
| chr3_4 | exon | 52599795 | 52600516 | 52599795 | ID=Msa0506300-mRNA-1:exon:11521;Parent=Msa0506300-mRNA-1 |
| chr3_4 | exon | 52600860 | 52601402 | 52600860 | ID=Msa0506300-mRNA-1:exon:11520;Parent=Msa0506300-mRNA-1 |
| chr3_4 | exon | 52602638 | 52602968 | 52602638 | ID=Msa0506300-mRNA-1:exon:11519;Parent=Msa0506300-mRNA-1 |
| chr3_4 | exon | 52603100 | 52603142 | 52603100 | ID=Msa0506300-mRNA-1:exon:11518;Parent=Msa0506300-mRNA-1 |
| chr3_4 | exon | 52603178 | 52603276 | 52603178 | ID=Msa0506300-mRNA-1:exon:11517;Parent=Msa0506300-mRNA-1 |
| chr3_4 | five_prime_UTR | 52603178 | 52603276 | 52603178 | ID=Msa0506300-mRNA-1:five_prime_utr;Parent=Msa0506300-mRNA-1 |
| chr3_4 | five_prime_UTR | 52603117 | 52603142 | 52603117 | ID=Msa0506300-mRNA-1:five_prime_utr;Parent=Msa0506300-mRNA-1 |
| chr3_4 | CDS | 52603100 | 52603116 | 52603100 | ID=Msa0506300-mRNA-1:cds;Parent=Msa0506300-mRNA-1 |
| chr3_4 | CDS | 52602638 | 52602968 | 52602638 | ID=Msa0506300-mRNA-1:cds;Parent=Msa0506300-mRNA-1 |
| chr3_4 | CDS | 52600860 | 52601402 | 52600860 | ID=Msa0506300-mRNA-1:cds;Parent=Msa0506300-mRNA-1 |
| chr3_4 | CDS | 52599795 | 52600516 | 52599795 | ID=Msa0506300-mRNA-1:cds;Parent=Msa0506300-mRNA-1 |
| chr3_4 | CDS | 52598099 | 52598444 | 52598099 | ID=Msa0506300-mRNA-1:cds;Parent=Msa0506300-mRNA-1 |
| chr3_4 | CDS | 52596215 | 52596769 | 52596215 | ID=Msa0506300-mRNA-1:cds;Parent=Msa0506300-mRNA-1 |
| chr3_4 | CDS | 52595037 | 52595855 | 52595037 | ID=Msa0506300-mRNA-1:cds;Parent=Msa0506300-mRNA-1 |
| chr3_4 | three_prime_UTR | 52594775 | 52595036 | 52594775 | ID=Msa0506300-mRNA-1:three_prime_utr;Parent=Msa0506300-mRNA-1 |
| chr3_4 | three_prime_UTR | 52594620 | 52594669 | 52594620 | ID=Msa0506300-mRNA-1:three_prime_utr;Parent=Msa0506300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
