AlfalfaGEDB | Msa0517570

M. sativa cultivar zhongmu-4 / Msa0517570

KEGG: -
GO: GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009862 GO:0009863 GO:0009864 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048831 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0080134 GO:0098542 GO:0140110 GO:1900055 GO:1900056 GO:1901698 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:1905622 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0517570	XP_013461494.1	93.210	324	8	3	1	324	1	310	0.0	603

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0517570	sp\|Q9LY00\|WRK70_ARATH	44.144	222	106	5	13	234	7	210	1.57e-49	170

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0517570	A0A072V0I2	93.210	324	8	3	1	324	1	310	0.0	603

TFs/TRs:

Gene ID	Type	Classification
Msa0517570	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0054310	Msa0517570	0.820468	6.751987e-53	-8.615850e-47
Msa0091930	Msa0517570	0.812214	4.745401e-51	-8.615850e-47
Msa0092910	Msa0517570	0.810802	9.614404e-51	-8.615850e-47
Msa0131420	Msa0517570	0.820563	6.421748e-53	-8.615850e-47
Msa0148720	Msa0517570	0.815990	6.963369e-52	-8.615850e-47
Msa0153450	Msa0517570	0.815513	8.896697e-52	-8.615850e-47
Msa0198640	Msa0517570	0.820474	6.731141e-53	-8.615850e-47
Msa0377800	Msa0517570	0.996583	2.011126e-229	-8.615850e-47
Msa0414650	Msa0517570	0.811155	8.066304e-51	-8.615850e-47
Msa0419670	Msa0517570	0.800384	1.478428e-48	-8.615850e-47
Msa0426600	Msa0517570	0.973497	1.574903e-136	-8.615850e-47
Msa0431440	Msa0517570	0.821827	3.282802e-53	-8.615850e-47
Msa0459560	Msa0517570	0.835478	1.638996e-56	-8.615850e-47
Msa0472910	Msa0517570	0.986807	4.873034e-168	-8.615850e-47
Msa0476330	Msa0517570	0.830282	3.206591e-55	-8.615850e-47
Msa0506300	Msa0517570	0.844870	5.782616e-59	-8.615850e-47
Msa0517570	Msa0518280	0.803689	3.092500e-49	-8.615850e-47
Msa0517570	Msa0520330	0.834892	2.304835e-56	-8.615850e-47
Msa0517570	Msa0568440	0.815217	1.035095e-51	-8.615850e-47
Msa0517570	Msa0574570	0.854573	1.124648e-61	-8.615850e-47
Msa0517570	Msa0574580	0.833788	4.359625e-56	-8.615850e-47
Msa0517570	Msa0708290	0.838418	2.909263e-57	-8.615850e-47
Msa0517570	Msa0708300	0.858172	9.885663e-63	-8.615850e-47
Msa0517570	Msa0745070	0.829736	4.357153e-55	-8.615850e-47
Msa0517570	Msa0780350	0.823214	1.562673e-53	-8.615850e-47
Msa0517570	Msa0825870	0.816709	4.808662e-52	-8.615850e-47
Msa0517570	Msa0834030	0.818691	1.717816e-52	-8.615850e-47
Msa0517570	Msa0936530	0.835556	1.566927e-56	-8.615850e-47
Msa0517570	Msa0936550	0.834646	2.656654e-56	-8.615850e-47
Msa0517570	Msa0952360	0.817993	2.471611e-52	-8.615850e-47
Msa0517570	Msa0972770	0.809107	2.227609e-50	-8.615850e-47
Msa0517570	Msa0973520	0.824807	6.605831e-54	-8.615850e-47
Msa0517570	Msa1026510	0.812543	4.020662e-51	-8.615850e-47
Msa0517570	Msa1074580	0.817373	3.411382e-52	-8.615850e-47
Msa0517570	Msa1154080	0.813212	2.869004e-51	-8.615850e-47
Msa0517570	Msa1177330	0.812159	4.877026e-51	-8.615850e-47
Msa0517570	Msa1201200	0.816788	4.616729e-52	-8.615850e-47
Msa0517570	Msa1236730	0.843910	1.047927e-58	-8.615850e-47
Msa0517570	Msa1269660	0.823772	1.157161e-53	-8.615850e-47
Msa0517570	Msa1317130	0.849796	2.568698e-60	-8.615850e-47
Msa0517570	Msa1344890	0.827400	1.597251e-54	-8.615850e-47
Msa0517570	Msa1353870	0.811512	6.747474e-51	-8.615850e-47
Msa0517570	Msa1353880	0.836960	6.887264e-57	-8.615850e-47
Msa0517570	Msa1458510	0.806603	7.592847e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0517570	MtrunA17_Chr3g0128671	93.210	324	8	3	1	324	1	310	0.0	603
Msa0517570	MtrunA17_Chr5g0428351	40.816	294	101	11	5	289	82	311	2.53e-52	174
Msa0517570	MtrunA17_Chr7g0244971	39.000	200	93	5	17	210	15	191	5.53e-38	137
Msa0517570	MtrunA17_Chr7g0244981	37.915	211	100	7	7	210	4	190	2.08e-35	129
Msa0517570	MtrunA17_Chr8g0350621	38.806	201	99	6	18	216	8	186	1.18e-34	127
Msa0517570	MtrunA17_Chr8g0334541	38.571	210	97	6	18	226	6	184	3.57e-31	118
Msa0517570	MtrunA17_Chr3g0126391	33.190	232	123	9	15	229	5	221	8.38e-25	102
Msa0517570	MtrunA17_Chr2g0315361	32.819	259	132	10	14	256	13	245	1.00e-24	101
Msa0517570	MtrunA17_Chr2g0315371	33.772	228	125	7	3	222	5	214	2.10e-24	100
Msa0517570	MtrunA17_Chr2g0315381	34.783	230	115	8	9	222	7	217	3.36e-23	97.4
Msa0517570	MtrunA17_Chr7g0275531	30.097	206	126	4	7	212	2	189	2.54e-21	92.8
Msa0517570	MtrunA17_Chr8g0347251	56.716	67	29	0	134	200	129	195	1.33e-20	90.9
Msa0517570	MtrunA17_Chr8g0387981	33.679	193	106	6	17	200	12	191	5.21e-20	89.4
Msa0517570	MtrunA17_Chr5g0431811	39.706	68	41	0	142	209	673	740	8.76e-13	69.3
Msa0517570	MtrunA17_Chr7g0224801	46.377	69	33	2	131	199	84	148	3.10e-12	64.3
Msa0517570	MtrunA17_Chr4g0071521	40.000	90	44	2	125	206	221	308	5.05e-12	65.9
Msa0517570	MtrunA17_Chr8g0387501	46.154	65	33	1	134	198	122	184	5.80e-12	65.1
Msa0517570	MtrunA17_Chr8g0348311	41.026	78	41	2	125	199	136	211	9.86e-12	65.1
Msa0517570	MtrunA17_Chr1g0147881	38.462	91	44	3	125	205	238	326	1.12e-11	65.1
Msa0517570	MtrunA17_Chr5g0418781	38.372	86	49	2	142	227	125	206	1.54e-11	63.9
Msa0517570	MtrunA17_Chr7g0238921	52.632	57	24	1	142	198	125	178	6.73e-11	62.4
Msa0517570	MtrunA17_Chr8g0386241	32.110	109	64	3	90	198	59	157	9.76e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0517570	AT3G56400.1	44.144	222	106	5	13	234	7	210	1.59e-50	170
Msa0517570	AT2G40750.1	34.259	324	185	7	10	310	8	326	1.80e-46	160
Msa0517570	AT5G24110.1	34.715	193	89	7	13	200	12	172	5.19e-23	97.4
Msa0517570	AT2G46400.1	30.357	224	102	5	13	226	4	183	9.03e-22	93.6
Msa0517570	AT4G11070.1	31.280	211	121	7	13	208	7	208	1.30e-21	93.6
Msa0517570	AT1G66550.1	34.054	185	97	4	18	202	10	169	2.78e-21	91.7
Msa0517570	AT1G66550.2	34.595	185	91	6	18	202	10	164	6.89e-21	90.5
Msa0517570	AT5G22570.1	28.704	216	114	4	18	217	11	202	7.42e-20	88.2
Msa0517570	AT1G66560.1	27.642	246	140	6	11	250	3	216	7.49e-20	87.4
Msa0517570	AT1G66600.1	29.752	242	136	5	18	259	10	217	9.50e-20	87.0
Msa0517570	AT5G01900.1	32.973	185	100	4	18	201	9	170	3.46e-19	85.9
Msa0517570	AT4G11070.2	29.126	206	100	6	13	208	7	176	1.27e-18	84.7
Msa0517570	AT2G40740.1	44.186	86	42	1	142	221	174	259	2.42e-18	84.0
Msa0517570	AT2G40740.3	44.186	86	42	1	142	221	183	268	3.06e-18	84.0
Msa0517570	AT4G23810.1	50.704	71	34	1	142	211	159	229	4.91e-18	83.6
Msa0517570	AT5G45260.1	35.714	154	92	4	47	198	1117	1265	2.58e-16	80.5
Msa0517570	AT1G80590.1	32.432	185	77	5	18	202	10	146	1.15e-14	72.8
Msa0517570	AT4G23550.1	49.153	59	28	1	140	198	139	195	7.44e-12	65.5
Msa0517570	AT5G52830.1	41.772	79	40	2	125	199	145	221	7.84e-12	65.9
Msa0517570	AT5G13080.1	43.243	74	38	2	126	199	53	122	2.50e-11	61.2
Msa0517570	AT2G46130.1	42.029	69	35	2	140	206	29	94	2.56e-11	60.5
Msa0517570	AT4G01250.1	38.961	77	42	3	125	198	109	183	5.73e-11	62.8
Msa0517570	AT1G69310.4	30.216	139	78	5	96	229	97	221	8.13e-11	62.4
Msa0517570	AT1G69310.2	30.216	139	78	5	96	229	97	221	8.13e-11	62.4
Msa0517570	AT1G69310.1	30.216	139	78	5	96	229	97	221	8.13e-11	62.4

Find 82 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAAATCTTGAAATTGATTT+TGG	0.027971	3_4:-69271390	Msa0517570:CDS
TATGTAATTTGGTACATTTC+TGG	0.119421	3_4:+69271723	None:intergenic
AACACTCATTTGCTATATTT+TGG	0.147599	3_4:+69273280	None:intergenic
TTGTTGGCAGTGACAGTTTC+AGG	0.206708	3_4:+69273251	None:intergenic
TGCAACCTTGGTCATGCTTC+CGG	0.212153	3_4:+69271781	None:intergenic
CATTCTCTGAAGATACTAAT+TGG	0.227820	3_4:-69271650	Msa0517570:CDS
TGATGTTACTGACAACTTAT+TGG	0.245112	3_4:-69271484	Msa0517570:CDS
GTATATGATGATCAAATTAA+TGG	0.270264	3_4:-69271086	Msa0517570:three_prime_UTR
GCAACCTTGGTCATGCTTCC+GGG	0.281835	3_4:+69271782	None:intergenic
TTCTATCAATTGTACCTGTT+TGG	0.295646	3_4:+69271752	None:intergenic
TTAAAATCAGACCACAAATT+AGG	0.299410	3_4:+69271459	None:intergenic
CAGAATCATGTGAATCATTC+AGG	0.322565	3_4:-69273035	Msa0517570:CDS
CATGTGAATCATTCAGGTTC+AGG	0.330373	3_4:-69273029	Msa0517570:CDS
CCTACATATAATATCATATA+TGG	0.331659	3_4:+69271169	None:intergenic
AGTAGTATTGTCGTCGTTGT+TGG	0.342310	3_4:+69271515	None:intergenic
GTAAATGAAAGGAAAATATT+AGG	0.347821	3_4:+69273416	None:intergenic
AAGAATCCTGTTTGTTCTGA+TGG	0.357623	3_4:-69273161	Msa0517570:CDS
GTCTCCTTCTGTTAAGGAAT+TGG	0.359709	3_4:-69273138	Msa0517570:CDS
GTTTGGTTGCTTTGCAACCT+TGG	0.376612	3_4:+69271769	None:intergenic
TAATTTGCAGGAGTTACTTC+AGG	0.382346	3_4:-69271809	Msa0517570:intron
GAAAGCCAATGTATGTAATT+TGG	0.392701	3_4:+69271712	None:intergenic
TGTTGGATTGGGTTAGGATT+TGG	0.397596	3_4:+69273338	None:intergenic
TCAGAGAATGAGACCATTTG+TGG	0.397937	3_4:+69271663	None:intergenic
TGATGGGTCTCCTTCTGTTA+AGG	0.399624	3_4:-69273144	Msa0517570:CDS
ACTCATAAAAGAGCTTCTTC+AGG	0.399737	3_4:-69273219	Msa0517570:CDS
TGTTGTTGTTGGATTGGGTT+AGG	0.404346	3_4:+69273332	None:intergenic
CAATTGGTGACACTCATTCC+TGG	0.409828	3_4:-69272687	Msa0517570:CDS
GTAGTATTGTCGTCGTTGTT+GGG	0.410207	3_4:+69271516	None:intergenic
TAAAACTTACAAATGGTAAC+TGG	0.414491	3_4:+69271196	None:intergenic
ATTCTCTGAAGATACTAATT+GGG	0.419258	3_4:-69271649	Msa0517570:CDS
CCTCTTCGATCCTTTGTAGT+TGG	0.426598	3_4:+69272924	None:intergenic
ACCATAGTCTCTAAAACAAT+TGG	0.428053	3_4:-69272703	Msa0517570:CDS
TTCAGGGGAACATGGTTCAT+TGG	0.430865	3_4:-69273012	Msa0517570:CDS
AGAATCCTGTTTGTTCTGAT+GGG	0.439454	3_4:-69273160	Msa0517570:CDS
ACCTTGGGAAATTAGAATTG+AGG	0.441878	3_4:+69272641	None:intergenic
TCCTTCTGTTAAGGAATTGG+TGG	0.442137	3_4:-69273135	Msa0517570:CDS
TAGTGGTGGAAGAAAAGAAA+AGG	0.447168	3_4:+69273367	None:intergenic
TTAGGATTTGGCAAATATAG+TGG	0.458785	3_4:+69273350	None:intergenic
TGCAATGAAACTAAAGGTTG+TGG	0.465134	3_4:-69271052	Msa0517570:three_prime_UTR
AGACCATTTGTGGAGTTTGT+AGG	0.471099	3_4:+69271673	None:intergenic
GTAGGCGTGTGCATATATAA+AGG	0.478171	3_4:-69271151	Msa0517570:three_prime_UTR
CTTCTGACCGTACTTTCTCC+AGG	0.478180	3_4:+69272669	None:intergenic
ACTTATTGGATCCTAATTTG+TGG	0.485951	3_4:-69271470	Msa0517570:CDS
CACCCTACAAACTCCACAAA+TGG	0.486229	3_4:-69271676	Msa0517570:CDS
ATGAAAGGAAAATATTAGGA+AGG	0.498685	3_4:+69273420	None:intergenic
ACAAAATGCAATGAAACTAA+AGG	0.505426	3_4:-69271058	Msa0517570:three_prime_UTR
ATGTGAATCATTCAGGTTCA+GGG	0.513638	3_4:-69273028	Msa0517570:CDS
CTCATAAAAGAGCTTCTTCA+GGG	0.513650	3_4:-69273218	Msa0517570:CDS
CATTCAGGTTCAGGGGAACA+TGG	0.514743	3_4:-69273020	Msa0517570:CDS
GCAGGAATACACAATATCCT+TGG	0.514816	3_4:+69271422	None:intergenic
TGGCAGATAAAACTTACAAA+TGG	0.519708	3_4:+69271189	None:intergenic
AGGTTGCAAAGCAACCAAAC+AGG	0.523803	3_4:-69271766	Msa0517570:CDS
GACCATTTGTGGAGTTTGTA+GGG	0.524922	3_4:+69271674	None:intergenic
AGTGGTGGAAGAAAAGAAAA+GGG	0.528613	3_4:+69273368	None:intergenic
AGGGGAACATGGTTCATTGG+TGG	0.531988	3_4:-69273009	Msa0517570:CDS
GGAGACCCATCAGAACAAAC+AGG	0.533380	3_4:+69273155	None:intergenic
GCAATGAAACTAAAGGTTGT+GGG	0.536305	3_4:-69271051	None:intergenic
CACATGTTATTAGCTCAGAA+AGG	0.537868	3_4:-69271560	Msa0517570:CDS
GAAGAGGTTCCTACAAAAGA+AGG	0.538026	3_4:-69272908	Msa0517570:intron
CCATATATGATATTATATGT+AGG	0.552215	3_4:-69271169	Msa0517570:three_prime_UTR
TGAAAGGAAAATATTAGGAA+GGG	0.553632	3_4:+69273421	None:intergenic
GCCACCAATTCCTTAACAGA+AGG	0.556097	3_4:+69273134	None:intergenic
TGAAGATTGTAGTTTAGATG+AGG	0.565987	3_4:-69273063	Msa0517570:CDS
ATGTACCAAATTACATACAT+TGG	0.567198	3_4:-69271717	Msa0517570:CDS
CTGGAGAAAGTACGGTCAGA+AGG	0.567429	3_4:-69272668	Msa0517570:CDS
TCCTCAATTCTAATTTCCCA+AGG	0.568294	3_4:-69272642	Msa0517570:intron
GTCAGAACCTCCTTTGAGTG+AGG	0.572819	3_4:+69271603	None:intergenic
GAAAGTGGGATGTAAATGAA+AGG	0.574023	3_4:+69273405	None:intergenic
GGAGTTACTTCAGGTGCACC+CGG	0.575709	3_4:-69271800	Msa0517570:CDS
ACTCATTCCTGGAGAAAGTA+CGG	0.586004	3_4:-69272676	Msa0517570:CDS
GAGATTGTCGCCAACTACAA+AGG	0.592832	3_4:-69272934	Msa0517570:CDS
GGATTTGGCAAATATAGTGG+TGG	0.605725	3_4:+69273353	None:intergenic
GAATTCTAATCCTCACTCAA+AGG	0.633382	3_4:-69271613	Msa0517570:CDS
CATTTGTGGAGTTTGTAGGG+TGG	0.641904	3_4:+69271677	None:intergenic
TTCTAATCCTCACTCAAAGG+AGG	0.641909	3_4:-69271610	Msa0517570:CDS
TTGTCAGTAACATCACTCCT+CGG	0.646183	3_4:+69271492	None:intergenic
TGTGAATCATTCAGGTTCAG+GGG	0.655461	3_4:-69273027	Msa0517570:CDS
TGCACCCGGAAGCATGACCA+AGG	0.656558	3_4:-69271786	Msa0517570:CDS
GTACATCAAATTGACAGACG+TGG	0.690360	3_4:+69271269	None:intergenic
GCAGGAAAACAGATGAGACA+AGG	0.694593	3_4:-69272726	Msa0517570:intron
CCAACTACAAAGGATCGAAG+AGG	0.701163	3_4:-69272924	Msa0517570:CDS
ACGACGACAATACTACTCCG+AGG	0.763721	3_4:-69271509	Msa0517570:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GATATTTATTAAAATTGATT+TGG	-	chr3_4:69272130-69272149	Msa0517570:intron	10.0%
!!!	AAATTTTACACTTAAATTTA+TGG	-	chr3_4:69272211-69272230	Msa0517570:intron	10.0%
!!	AAAAAAAAAAACTAATTAGT+GGG	+	chr3_4:69272518-69272537	None:intergenic	10.0%
!!	AAAAAAAAAAAACTAATTAG+TGG	+	chr3_4:69272519-69272538	None:intergenic	10.0%
!!	GATATTTATTAAAATTGATT+TGG	-	chr3_4:69272130-69272149	Msa0517570:intron	10.0%
!!!	AAATTTTACACTTAAATTTA+TGG	-	chr3_4:69272211-69272230	Msa0517570:intron	10.0%
!!	AAAAAAAAAAACTAATTAGT+GGG	+	chr3_4:69272518-69272537	None:intergenic	10.0%
!!	AAAAAAAAAAAACTAATTAG+TGG	+	chr3_4:69272519-69272538	None:intergenic	10.0%
!!	TTAAGTGTAAAATTTACTTT+GGG	+	chr3_4:69272206-69272225	None:intergenic	15.0%
!!	TTTAAGTGTAAAATTTACTT+TGG	+	chr3_4:69272207-69272226	None:intergenic	15.0%
!!	ATATAATCTCATTTCAAAAT+CGG	+	chr3_4:69272474-69272493	None:intergenic	15.0%
!!!	AAAATCTTGAAATTGATTTT+GGG	-	chr3_4:69273111-69273130	Msa0517570:CDS	15.0%
!!	TTAAGTGTAAAATTTACTTT+GGG	+	chr3_4:69272206-69272225	None:intergenic	15.0%
!!	TTTAAGTGTAAAATTTACTT+TGG	+	chr3_4:69272207-69272226	None:intergenic	15.0%
!!	ATATAATCTCATTTCAAAAT+CGG	+	chr3_4:69272474-69272493	None:intergenic	15.0%
!!!	AAAATCTTGAAATTGATTTT+GGG	-	chr3_4:69273111-69273130	Msa0517570:CDS	15.0%
!!	GTAAATGAAAGGAAAATATT+AGG	+	chr3_4:69271087-69271106	None:intergenic	20.0%
!!	TAGAAAACAAAAAAATCAAC+AGG	+	chr3_4:69271688-69271707	None:intergenic	20.0%
!!	TTTATTCTTAATTATTGTGC+AGG	-	chr3_4:69271756-69271775	Msa0517570:CDS	20.0%
!!	TTAGATGTGTATAATTGATT+TGG	-	chr3_4:69272095-69272114	Msa0517570:intron	20.0%
!!	TAAGTGTAAAATTTACTTTG+GGG	+	chr3_4:69272205-69272224	None:intergenic	20.0%
!!	TTACACTTAAATTTATGGTT+AGG	-	chr3_4:69272216-69272235	Msa0517570:intron	20.0%
!!	TTATAGTTTCAACAAAATCA+TGG	-	chr3_4:69272401-69272420	Msa0517570:intron	20.0%
!!	GAATTGATTAACTAATTAGT+GGG	+	chr3_4:69272552-69272571	None:intergenic	20.0%
!!	TGAATTGATTAACTAATTAG+TGG	+	chr3_4:69272553-69272572	None:intergenic	20.0%
!!!	CAAAATCTTGAAATTGATTT+TGG	-	chr3_4:69273110-69273129	Msa0517570:CDS	20.0%
!!!	AAATCTTGAAATTGATTTTG+GGG	-	chr3_4:69273112-69273131	Msa0517570:CDS	20.0%
!!	CCTACATATAATATCATATA+TGG	+	chr3_4:69273334-69273353	None:intergenic	20.0%
!!	CCATATATGATATTATATGT+AGG	-	chr3_4:69273331-69273350	Msa0517570:five_prime_UTR	20.0%
!!	GTATATGATGATCAAATTAA+TGG	-	chr3_4:69273414-69273433	Msa0517570:five_prime_UTR	20.0%
!!	GTAAATGAAAGGAAAATATT+AGG	+	chr3_4:69271087-69271106	None:intergenic	20.0%
!!	TAGAAAACAAAAAAATCAAC+AGG	+	chr3_4:69271688-69271707	None:intergenic	20.0%
!!	TTTATTCTTAATTATTGTGC+AGG	-	chr3_4:69271756-69271775	Msa0517570:CDS	20.0%
!!	TTAGATGTGTATAATTGATT+TGG	-	chr3_4:69272095-69272114	Msa0517570:intron	20.0%
!!	TAAGTGTAAAATTTACTTTG+GGG	+	chr3_4:69272205-69272224	None:intergenic	20.0%
!!	TTACACTTAAATTTATGGTT+AGG	-	chr3_4:69272216-69272235	Msa0517570:intron	20.0%
!!	TTATAGTTTCAACAAAATCA+TGG	-	chr3_4:69272401-69272420	Msa0517570:intron	20.0%
!!	GAATTGATTAACTAATTAGT+GGG	+	chr3_4:69272552-69272571	None:intergenic	20.0%
!!	TGAATTGATTAACTAATTAG+TGG	+	chr3_4:69272553-69272572	None:intergenic	20.0%
!!!	CAAAATCTTGAAATTGATTT+TGG	-	chr3_4:69273110-69273129	Msa0517570:CDS	20.0%
!!!	AAATCTTGAAATTGATTTTG+GGG	-	chr3_4:69273112-69273131	Msa0517570:CDS	20.0%
!!	CCTACATATAATATCATATA+TGG	+	chr3_4:69273334-69273353	None:intergenic	20.0%
!!	CCATATATGATATTATATGT+AGG	-	chr3_4:69273331-69273350	Msa0517570:five_prime_UTR	20.0%
!!	GTATATGATGATCAAATTAA+TGG	-	chr3_4:69273414-69273433	Msa0517570:five_prime_UTR	20.0%
!	TGAAAGGAAAATATTAGGAA+GGG	+	chr3_4:69271082-69271101	None:intergenic	25.0%
!	ATGAAAGGAAAATATTAGGA+AGG	+	chr3_4:69271083-69271102	None:intergenic	25.0%
!!!	AACACTCATTTGCTATATTT+TGG	+	chr3_4:69271223-69271242	None:intergenic	25.0%
!!	AAAATAGTACCTTCTTTTGT+AGG	+	chr3_4:69271604-69271623	None:intergenic	25.0%
!!!	AAGAAGGTACTATTTTTGTA+CGG	-	chr3_4:69271608-69271627	Msa0517570:CDS	25.0%
!!!	ACATGTTTTTTTTTCCTTGT+TGG	-	chr3_4:69271641-69271660	Msa0517570:CDS	25.0%
!	AGGAAAATAATGATTACCTT+GGG	+	chr3_4:69271877-69271896	None:intergenic	25.0%
!	ACTTGCTCATATTGTATAAA+TGG	+	chr3_4:69271964-69271983	None:intergenic	25.0%
!!!	AGATTATAGAAGCATTTTAG+AGG	-	chr3_4:69272067-69272086	Msa0517570:intron	25.0%
!	TCAACTCTTACAAAATCAAT+TGG	-	chr3_4:69272307-69272326	Msa0517570:intron	25.0%
!	TGAGATTATATACTATCAAG+TGG	-	chr3_4:69272483-69272502	Msa0517570:intron	25.0%
!	TATGTAATTTGGTACATTTC+TGG	+	chr3_4:69272780-69272799	None:intergenic	25.0%
!	ATGTACCAAATTACATACAT+TGG	-	chr3_4:69272783-69272802	Msa0517570:intron	25.0%
!!	ATTCTCTGAAGATACTAATT+GGG	-	chr3_4:69272851-69272870	Msa0517570:intron	25.0%
!	TTAAAATCAGACCACAAATT+AGG	+	chr3_4:69273044-69273063	None:intergenic	25.0%
!!!	TAATTTGTGGTCTGATTTTA+AGG	-	chr3_4:69273043-69273062	Msa0517570:CDS	25.0%
!	TAAAACTTACAAATGGTAAC+TGG	+	chr3_4:69273307-69273326	None:intergenic	25.0%
!!!	TTTAGTTTCATTGCATTTTG+TGG	+	chr3_4:69273443-69273462	None:intergenic	25.0%
!	ACAAAATGCAATGAAACTAA+AGG	-	chr3_4:69273442-69273461	Msa0517570:five_prime_UTR	25.0%
!	TGAAAGGAAAATATTAGGAA+GGG	+	chr3_4:69271082-69271101	None:intergenic	25.0%
!	ATGAAAGGAAAATATTAGGA+AGG	+	chr3_4:69271083-69271102	None:intergenic	25.0%
!!!	AACACTCATTTGCTATATTT+TGG	+	chr3_4:69271223-69271242	None:intergenic	25.0%
!!	AAAATAGTACCTTCTTTTGT+AGG	+	chr3_4:69271604-69271623	None:intergenic	25.0%
!!!	AAGAAGGTACTATTTTTGTA+CGG	-	chr3_4:69271608-69271627	Msa0517570:CDS	25.0%
!!!	ACATGTTTTTTTTTCCTTGT+TGG	-	chr3_4:69271641-69271660	Msa0517570:CDS	25.0%
!	AGGAAAATAATGATTACCTT+GGG	+	chr3_4:69271877-69271896	None:intergenic	25.0%
!	ACTTGCTCATATTGTATAAA+TGG	+	chr3_4:69271964-69271983	None:intergenic	25.0%
!!!	AGATTATAGAAGCATTTTAG+AGG	-	chr3_4:69272067-69272086	Msa0517570:intron	25.0%
!	TCAACTCTTACAAAATCAAT+TGG	-	chr3_4:69272307-69272326	Msa0517570:intron	25.0%
!	TGAGATTATATACTATCAAG+TGG	-	chr3_4:69272483-69272502	Msa0517570:intron	25.0%
!	TATGTAATTTGGTACATTTC+TGG	+	chr3_4:69272780-69272799	None:intergenic	25.0%
!	ATGTACCAAATTACATACAT+TGG	-	chr3_4:69272783-69272802	Msa0517570:intron	25.0%
!!	ATTCTCTGAAGATACTAATT+GGG	-	chr3_4:69272851-69272870	Msa0517570:intron	25.0%
!	TTAAAATCAGACCACAAATT+AGG	+	chr3_4:69273044-69273063	None:intergenic	25.0%
!!!	TAATTTGTGGTCTGATTTTA+AGG	-	chr3_4:69273043-69273062	Msa0517570:CDS	25.0%
!	TAAAACTTACAAATGGTAAC+TGG	+	chr3_4:69273307-69273326	None:intergenic	25.0%
!!!	TTTAGTTTCATTGCATTTTG+TGG	+	chr3_4:69273443-69273462	None:intergenic	25.0%
!	ACAAAATGCAATGAAACTAA+AGG	-	chr3_4:69273442-69273461	Msa0517570:five_prime_UTR	25.0%
!!	TATGTTTTTGCTAGGAAAGT+GGG	+	chr3_4:69271112-69271131	None:intergenic	30.0%
	TTAGGATTTGGCAAATATAG+TGG	+	chr3_4:69271153-69271172	None:intergenic	30.0%
!!!	TTTGCTATATTTTGGTGTAG+TGG	+	chr3_4:69271215-69271234	None:intergenic	30.0%
!	TATGAGTAGCTTCTTTTTGT+TGG	+	chr3_4:69271268-69271287	None:intergenic	30.0%
	TGAAGATTGTAGTTTAGATG+AGG	-	chr3_4:69271437-69271456	Msa0517570:CDS	30.0%
!	GTTTTCATTTCATTCCAACA+AGG	+	chr3_4:69271658-69271677	None:intergenic	30.0%
	TTGGAATGAAATGAAAACGT+GGG	-	chr3_4:69271660-69271679	Msa0517570:CDS	30.0%
!!	ACCATAGTCTCTAAAACAAT+TGG	-	chr3_4:69271797-69271816	Msa0517570:CDS	30.0%
!!!	ACCAATTGTTTTAGAGACTA+TGG	+	chr3_4:69271801-69271820	None:intergenic	30.0%
	GAGGAAAATAATGATTACCT+TGG	+	chr3_4:69271878-69271897	None:intergenic	30.0%
	AAATCAGTAGAAAAAAGCAG+AGG	+	chr3_4:69271897-69271916	None:intergenic	30.0%
!!	TATGGTTAGGTTCACTTTTA+CGG	-	chr3_4:69272229-69272248	Msa0517570:intron	30.0%
	ATATTGAAACATGCACATAG+CGG	+	chr3_4:69272354-69272373	None:intergenic	30.0%
	ATGTGCATGTTTCAATATCA+TGG	-	chr3_4:69272356-69272375	Msa0517570:intron	30.0%
	CCTGCAAATTATCATTGAAA+AGG	+	chr3_4:69272682-69272701	None:intergenic	30.0%
!!	CCTTTTCAATGATAATTTGC+AGG	-	chr3_4:69272679-69272698	Msa0517570:CDS	30.0%
	TTCTATCAATTGTACCTGTT+TGG	+	chr3_4:69272751-69272770	None:intergenic	30.0%
	GAAAGCCAATGTATGTAATT+TGG	+	chr3_4:69272791-69272810	None:intergenic	30.0%
!	CATTCTCTGAAGATACTAAT+TGG	-	chr3_4:69272850-69272869	Msa0517570:intron	30.0%
	TGATGTTACTGACAACTTAT+TGG	-	chr3_4:69273016-69273035	Msa0517570:CDS	30.0%
	ACTTATTGGATCCTAATTTG+TGG	-	chr3_4:69273030-69273049	Msa0517570:CDS	30.0%
	TGGCAGATAAAACTTACAAA+TGG	+	chr3_4:69273314-69273333	None:intergenic	30.0%
!!	TATGTTTTTGCTAGGAAAGT+GGG	+	chr3_4:69271112-69271131	None:intergenic	30.0%
	TTAGGATTTGGCAAATATAG+TGG	+	chr3_4:69271153-69271172	None:intergenic	30.0%
!!!	TTTGCTATATTTTGGTGTAG+TGG	+	chr3_4:69271215-69271234	None:intergenic	30.0%
!	TATGAGTAGCTTCTTTTTGT+TGG	+	chr3_4:69271268-69271287	None:intergenic	30.0%
	TGAAGATTGTAGTTTAGATG+AGG	-	chr3_4:69271437-69271456	Msa0517570:CDS	30.0%
!	GTTTTCATTTCATTCCAACA+AGG	+	chr3_4:69271658-69271677	None:intergenic	30.0%
	TTGGAATGAAATGAAAACGT+GGG	-	chr3_4:69271660-69271679	Msa0517570:CDS	30.0%
!!	ACCATAGTCTCTAAAACAAT+TGG	-	chr3_4:69271797-69271816	Msa0517570:CDS	30.0%
!!!	ACCAATTGTTTTAGAGACTA+TGG	+	chr3_4:69271801-69271820	None:intergenic	30.0%
	GAGGAAAATAATGATTACCT+TGG	+	chr3_4:69271878-69271897	None:intergenic	30.0%
	AAATCAGTAGAAAAAAGCAG+AGG	+	chr3_4:69271897-69271916	None:intergenic	30.0%
!!	TATGGTTAGGTTCACTTTTA+CGG	-	chr3_4:69272229-69272248	Msa0517570:intron	30.0%
	ATATTGAAACATGCACATAG+CGG	+	chr3_4:69272354-69272373	None:intergenic	30.0%
	ATGTGCATGTTTCAATATCA+TGG	-	chr3_4:69272356-69272375	Msa0517570:intron	30.0%
	CCTGCAAATTATCATTGAAA+AGG	+	chr3_4:69272682-69272701	None:intergenic	30.0%
!!	CCTTTTCAATGATAATTTGC+AGG	-	chr3_4:69272679-69272698	Msa0517570:CDS	30.0%
	TTCTATCAATTGTACCTGTT+TGG	+	chr3_4:69272751-69272770	None:intergenic	30.0%
	GAAAGCCAATGTATGTAATT+TGG	+	chr3_4:69272791-69272810	None:intergenic	30.0%
!	CATTCTCTGAAGATACTAAT+TGG	-	chr3_4:69272850-69272869	Msa0517570:intron	30.0%
	TGATGTTACTGACAACTTAT+TGG	-	chr3_4:69273016-69273035	Msa0517570:CDS	30.0%
	ACTTATTGGATCCTAATTTG+TGG	-	chr3_4:69273030-69273049	Msa0517570:CDS	30.0%
	TGGCAGATAAAACTTACAAA+TGG	+	chr3_4:69273314-69273333	None:intergenic	30.0%
	GAAAGTGGGATGTAAATGAA+AGG	+	chr3_4:69271098-69271117	None:intergenic	35.0%
!!	GTATGTTTTTGCTAGGAAAG+TGG	+	chr3_4:69271113-69271132	None:intergenic	35.0%
!!	GAAAAGGGTATGTTTTTGCT+AGG	+	chr3_4:69271120-69271139	None:intergenic	35.0%
!	AGTGGTGGAAGAAAAGAAAA+GGG	+	chr3_4:69271135-69271154	None:intergenic	35.0%
!	TAGTGGTGGAAGAAAAGAAA+AGG	+	chr3_4:69271136-69271155	None:intergenic	35.0%
!	GTTGTTGTTGTTGTTGGATT+GGG	+	chr3_4:69271176-69271195	None:intergenic	35.0%
!	TGTTGTTGTTGTTGTTGGAT+TGG	+	chr3_4:69271177-69271196	None:intergenic	35.0%
!	GTTTGTGTTGTTGTTGTTGT+TGG	+	chr3_4:69271182-69271201	None:intergenic	35.0%
!!!	ATATTTTGGTGTAGTGGATC+AGG	+	chr3_4:69271209-69271228	None:intergenic	35.0%
	ACTCATAAAAGAGCTTCTTC+AGG	-	chr3_4:69271281-69271300	Msa0517570:three_prime_UTR	35.0%
	CTCATAAAAGAGCTTCTTCA+GGG	-	chr3_4:69271282-69271301	Msa0517570:three_prime_UTR	35.0%
	AAGAATCCTGTTTGTTCTGA+TGG	-	chr3_4:69271339-69271358	Msa0517570:CDS	35.0%
	AGAATCCTGTTTGTTCTGAT+GGG	-	chr3_4:69271340-69271359	Msa0517570:CDS	35.0%
	CAGAATCATGTGAATCATTC+AGG	-	chr3_4:69271465-69271484	Msa0517570:CDS	35.0%
!	ATGTGAATCATTCAGGTTCA+GGG	-	chr3_4:69271472-69271491	Msa0517570:CDS	35.0%
!!!	ACTATTTTTGTACGGACACA+AGG	-	chr3_4:69271616-69271635	Msa0517570:CDS	35.0%
	GTTGGAATGAAATGAAAACG+TGG	-	chr3_4:69271659-69271678	Msa0517570:CDS	35.0%
	TCCTCAATTCTAATTTCCCA+AGG	-	chr3_4:69271858-69271877	Msa0517570:intron	35.0%
	ACCTTGGGAAATTAGAATTG+AGG	+	chr3_4:69271862-69271881	None:intergenic	35.0%
!	TAATTTGCAGGAGTTACTTC+AGG	-	chr3_4:69272691-69272710	Msa0517570:CDS	35.0%
	GAATTCTAATCCTCACTCAA+AGG	-	chr3_4:69272887-69272906	Msa0517570:intron	35.0%
	CACATGTTATTAGCTCAGAA+AGG	-	chr3_4:69272940-69272959	Msa0517570:CDS	35.0%
!	TAAGGATTTTGAACTCTCCA+AGG	-	chr3_4:69273061-69273080	Msa0517570:CDS	35.0%
!!!	AAGATTTTGAGATTCAGTGC+AGG	+	chr3_4:69273099-69273118	None:intergenic	35.0%
!	AGTTTCATTGCATTTTGTGG+AGG	+	chr3_4:69273440-69273459	None:intergenic	35.0%
	TGCAATGAAACTAAAGGTTG+TGG	-	chr3_4:69273448-69273467	Msa0517570:five_prime_UTR	35.0%
	GAAAGTGGGATGTAAATGAA+AGG	+	chr3_4:69271098-69271117	None:intergenic	35.0%
!!	GTATGTTTTTGCTAGGAAAG+TGG	+	chr3_4:69271113-69271132	None:intergenic	35.0%
!!	GAAAAGGGTATGTTTTTGCT+AGG	+	chr3_4:69271120-69271139	None:intergenic	35.0%
!	AGTGGTGGAAGAAAAGAAAA+GGG	+	chr3_4:69271135-69271154	None:intergenic	35.0%
!	TAGTGGTGGAAGAAAAGAAA+AGG	+	chr3_4:69271136-69271155	None:intergenic	35.0%
!	GTTGTTGTTGTTGTTGGATT+GGG	+	chr3_4:69271176-69271195	None:intergenic	35.0%
!	TGTTGTTGTTGTTGTTGGAT+TGG	+	chr3_4:69271177-69271196	None:intergenic	35.0%
!	GTTTGTGTTGTTGTTGTTGT+TGG	+	chr3_4:69271182-69271201	None:intergenic	35.0%
!!!	ATATTTTGGTGTAGTGGATC+AGG	+	chr3_4:69271209-69271228	None:intergenic	35.0%
	ACTCATAAAAGAGCTTCTTC+AGG	-	chr3_4:69271281-69271300	Msa0517570:three_prime_UTR	35.0%
	CTCATAAAAGAGCTTCTTCA+GGG	-	chr3_4:69271282-69271301	Msa0517570:three_prime_UTR	35.0%
	AAGAATCCTGTTTGTTCTGA+TGG	-	chr3_4:69271339-69271358	Msa0517570:CDS	35.0%
	AGAATCCTGTTTGTTCTGAT+GGG	-	chr3_4:69271340-69271359	Msa0517570:CDS	35.0%
	CAGAATCATGTGAATCATTC+AGG	-	chr3_4:69271465-69271484	Msa0517570:CDS	35.0%
!	ATGTGAATCATTCAGGTTCA+GGG	-	chr3_4:69271472-69271491	Msa0517570:CDS	35.0%
!!!	ACTATTTTTGTACGGACACA+AGG	-	chr3_4:69271616-69271635	Msa0517570:CDS	35.0%
	GTTGGAATGAAATGAAAACG+TGG	-	chr3_4:69271659-69271678	Msa0517570:CDS	35.0%
	TCCTCAATTCTAATTTCCCA+AGG	-	chr3_4:69271858-69271877	Msa0517570:intron	35.0%
	ACCTTGGGAAATTAGAATTG+AGG	+	chr3_4:69271862-69271881	None:intergenic	35.0%
!	TAATTTGCAGGAGTTACTTC+AGG	-	chr3_4:69272691-69272710	Msa0517570:CDS	35.0%
	GAATTCTAATCCTCACTCAA+AGG	-	chr3_4:69272887-69272906	Msa0517570:intron	35.0%
	CACATGTTATTAGCTCAGAA+AGG	-	chr3_4:69272940-69272959	Msa0517570:CDS	35.0%
!	TAAGGATTTTGAACTCTCCA+AGG	-	chr3_4:69273061-69273080	Msa0517570:CDS	35.0%
!!!	AAGATTTTGAGATTCAGTGC+AGG	+	chr3_4:69273099-69273118	None:intergenic	35.0%
!	AGTTTCATTGCATTTTGTGG+AGG	+	chr3_4:69273440-69273459	None:intergenic	35.0%
	GGATTTGGCAAATATAGTGG+TGG	+	chr3_4:69271150-69271169	None:intergenic	40.0%
!	TGTTGGATTGGGTTAGGATT+TGG	+	chr3_4:69271165-69271184	None:intergenic	40.0%
!	TGTTGTTGTTGGATTGGGTT+AGG	+	chr3_4:69271171-69271190	None:intergenic	40.0%
	GTCTCCTTCTGTTAAGGAAT+TGG	-	chr3_4:69271362-69271381	Msa0517570:CDS	40.0%
	TCCTTCTGTTAAGGAATTGG+TGG	-	chr3_4:69271365-69271384	Msa0517570:CDS	40.0%
!	CATGTGAATCATTCAGGTTC+AGG	-	chr3_4:69271471-69271490	Msa0517570:CDS	40.0%
!	TGTGAATCATTCAGGTTCAG+GGG	-	chr3_4:69271473-69271492	Msa0517570:CDS	40.0%
	GAAGAGGTTCCTACAAAAGA+AGG	-	chr3_4:69271592-69271611	Msa0517570:CDS	40.0%
	ACTCATTCCTGGAGAAAGTA+CGG	-	chr3_4:69271824-69271843	Msa0517570:intron	40.0%
!!	ATAGCGGATGTTTGGTTATG+CGG	+	chr3_4:69272338-69272357	None:intergenic	40.0%
	GACCATTTGTGGAGTTTGTA+GGG	+	chr3_4:69272829-69272848	None:intergenic	40.0%
	AGACCATTTGTGGAGTTTGT+AGG	+	chr3_4:69272830-69272849	None:intergenic	40.0%
	TCAGAGAATGAGACCATTTG+TGG	+	chr3_4:69272840-69272859	None:intergenic	40.0%
	TTCTAATCCTCACTCAAAGG+AGG	-	chr3_4:69272890-69272909	Msa0517570:intron	40.0%
	GTAGTATTGTCGTCGTTGTT+GGG	+	chr3_4:69272987-69273006	None:intergenic	40.0%
	AGTAGTATTGTCGTCGTTGT+TGG	+	chr3_4:69272988-69273007	None:intergenic	40.0%
	TTGTCAGTAACATCACTCCT+CGG	+	chr3_4:69273011-69273030	None:intergenic	40.0%
	GCAGGAATACACAATATCCT+TGG	+	chr3_4:69273081-69273100	None:intergenic	40.0%
	GTACATCAAATTGACAGACG+TGG	+	chr3_4:69273234-69273253	None:intergenic	40.0%
	GTAGGCGTGTGCATATATAA+AGG	-	chr3_4:69273349-69273368	Msa0517570:five_prime_UTR	40.0%
	GGATTTGGCAAATATAGTGG+TGG	+	chr3_4:69271150-69271169	None:intergenic	40.0%
!	TGTTGGATTGGGTTAGGATT+TGG	+	chr3_4:69271165-69271184	None:intergenic	40.0%
!	TGTTGTTGTTGGATTGGGTT+AGG	+	chr3_4:69271171-69271190	None:intergenic	40.0%
	GTCTCCTTCTGTTAAGGAAT+TGG	-	chr3_4:69271362-69271381	Msa0517570:CDS	40.0%
	TCCTTCTGTTAAGGAATTGG+TGG	-	chr3_4:69271365-69271384	Msa0517570:CDS	40.0%
!	CATGTGAATCATTCAGGTTC+AGG	-	chr3_4:69271471-69271490	Msa0517570:CDS	40.0%
!	TGTGAATCATTCAGGTTCAG+GGG	-	chr3_4:69271473-69271492	Msa0517570:CDS	40.0%
	GAAGAGGTTCCTACAAAAGA+AGG	-	chr3_4:69271592-69271611	Msa0517570:CDS	40.0%
	ACTCATTCCTGGAGAAAGTA+CGG	-	chr3_4:69271824-69271843	Msa0517570:intron	40.0%
!!	ATAGCGGATGTTTGGTTATG+CGG	+	chr3_4:69272338-69272357	None:intergenic	40.0%
	GACCATTTGTGGAGTTTGTA+GGG	+	chr3_4:69272829-69272848	None:intergenic	40.0%
	AGACCATTTGTGGAGTTTGT+AGG	+	chr3_4:69272830-69272849	None:intergenic	40.0%
	TCAGAGAATGAGACCATTTG+TGG	+	chr3_4:69272840-69272859	None:intergenic	40.0%
	TTCTAATCCTCACTCAAAGG+AGG	-	chr3_4:69272890-69272909	Msa0517570:intron	40.0%
	GTAGTATTGTCGTCGTTGTT+GGG	+	chr3_4:69272987-69273006	None:intergenic	40.0%
	AGTAGTATTGTCGTCGTTGT+TGG	+	chr3_4:69272988-69273007	None:intergenic	40.0%
	TTGTCAGTAACATCACTCCT+CGG	+	chr3_4:69273011-69273030	None:intergenic	40.0%
	GCAGGAATACACAATATCCT+TGG	+	chr3_4:69273081-69273100	None:intergenic	40.0%
	GTACATCAAATTGACAGACG+TGG	+	chr3_4:69273234-69273253	None:intergenic	40.0%
	GTAGGCGTGTGCATATATAA+AGG	-	chr3_4:69273349-69273368	Msa0517570:five_prime_UTR	40.0%
	TTGTTGGCAGTGACAGTTTC+AGG	+	chr3_4:69271252-69271271	None:intergenic	45.0%
!	TGATGGGTCTCCTTCTGTTA+AGG	-	chr3_4:69271356-69271375	Msa0517570:CDS	45.0%
	GCCACCAATTCCTTAACAGA+AGG	+	chr3_4:69271369-69271388	None:intergenic	45.0%
	TTCAGGGGAACATGGTTCAT+TGG	-	chr3_4:69271488-69271507	Msa0517570:CDS	45.0%
	GAGATTGTCGCCAACTACAA+AGG	-	chr3_4:69271566-69271585	Msa0517570:CDS	45.0%
	CCTCTTCGATCCTTTGTAGT+TGG	+	chr3_4:69271579-69271598	None:intergenic	45.0%
	CCAACTACAAAGGATCGAAG+AGG	-	chr3_4:69271576-69271595	Msa0517570:CDS	45.0%
	GCAGGAAAACAGATGAGACA+AGG	-	chr3_4:69271774-69271793	Msa0517570:CDS	45.0%
!	CAATTGGTGACACTCATTCC+TGG	-	chr3_4:69271813-69271832	Msa0517570:intron	45.0%
!	TAGCGGATGTTTGGTTATGC+GGG	+	chr3_4:69272337-69272356	None:intergenic	45.0%
!!	ACATGCACATAGCGGATGTT+TGG	+	chr3_4:69272346-69272365	None:intergenic	45.0%
	AAACACTATACCAGCTAGCG+CGG	+	chr3_4:69272611-69272630	None:intergenic	45.0%
!	GTTTGGTTGCTTTGCAACCT+TGG	+	chr3_4:69272734-69272753	None:intergenic	45.0%
	AGGTTGCAAAGCAACCAAAC+AGG	-	chr3_4:69272734-69272753	Msa0517570:intron	45.0%
	CATTTGTGGAGTTTGTAGGG+TGG	+	chr3_4:69272826-69272845	None:intergenic	45.0%
	CACCCTACAAACTCCACAAA+TGG	-	chr3_4:69272824-69272843	Msa0517570:intron	45.0%
	TTGTTGGCAGTGACAGTTTC+AGG	+	chr3_4:69271252-69271271	None:intergenic	45.0%
!	TGATGGGTCTCCTTCTGTTA+AGG	-	chr3_4:69271356-69271375	Msa0517570:CDS	45.0%
	GCCACCAATTCCTTAACAGA+AGG	+	chr3_4:69271369-69271388	None:intergenic	45.0%
	TTCAGGGGAACATGGTTCAT+TGG	-	chr3_4:69271488-69271507	Msa0517570:CDS	45.0%
	GAGATTGTCGCCAACTACAA+AGG	-	chr3_4:69271566-69271585	Msa0517570:CDS	45.0%
	CCTCTTCGATCCTTTGTAGT+TGG	+	chr3_4:69271579-69271598	None:intergenic	45.0%
	CCAACTACAAAGGATCGAAG+AGG	-	chr3_4:69271576-69271595	Msa0517570:CDS	45.0%
	GCAGGAAAACAGATGAGACA+AGG	-	chr3_4:69271774-69271793	Msa0517570:CDS	45.0%
!	CAATTGGTGACACTCATTCC+TGG	-	chr3_4:69271813-69271832	Msa0517570:intron	45.0%
!	TAGCGGATGTTTGGTTATGC+GGG	+	chr3_4:69272337-69272356	None:intergenic	45.0%
!!	ACATGCACATAGCGGATGTT+TGG	+	chr3_4:69272346-69272365	None:intergenic	45.0%
	AAACACTATACCAGCTAGCG+CGG	+	chr3_4:69272611-69272630	None:intergenic	45.0%
!	GTTTGGTTGCTTTGCAACCT+TGG	+	chr3_4:69272734-69272753	None:intergenic	45.0%
	AGGTTGCAAAGCAACCAAAC+AGG	-	chr3_4:69272734-69272753	Msa0517570:intron	45.0%
	CATTTGTGGAGTTTGTAGGG+TGG	+	chr3_4:69272826-69272845	None:intergenic	45.0%
	CACCCTACAAACTCCACAAA+TGG	-	chr3_4:69272824-69272843	Msa0517570:intron	45.0%
!!!	TAGTAAAAAATATTTTTTAA+CGG	-	chr3_4:69272024-69272043	Msa0517570:intron	5.0%
!!!	TAGTAAAAAATATTTTTTAA+CGG	-	chr3_4:69272024-69272043	Msa0517570:intron	5.0%
	GGAGACCCATCAGAACAAAC+AGG	+	chr3_4:69271348-69271367	None:intergenic	50.0%
!	CATTCAGGTTCAGGGGAACA+TGG	-	chr3_4:69271480-69271499	Msa0517570:CDS	50.0%
	AGGGGAACATGGTTCATTGG+TGG	-	chr3_4:69271491-69271510	Msa0517570:CDS	50.0%
	CTTCTGACCGTACTTTCTCC+AGG	+	chr3_4:69271834-69271853	None:intergenic	50.0%
!	CTGGAGAAAGTACGGTCAGA+AGG	-	chr3_4:69271832-69271851	Msa0517570:intron	50.0%
	ACAAATTAACCCGCGCTAGC+TGG	-	chr3_4:69272598-69272617	Msa0517570:intron	50.0%
	AACACTATACCAGCTAGCGC+GGG	+	chr3_4:69272610-69272629	None:intergenic	50.0%
	TGCAACCTTGGTCATGCTTC+CGG	+	chr3_4:69272722-69272741	None:intergenic	50.0%
	GTCAGAACCTCCTTTGAGTG+AGG	+	chr3_4:69272900-69272919	None:intergenic	50.0%
	ACGACGACAATACTACTCCG+AGG	-	chr3_4:69272991-69273010	Msa0517570:CDS	50.0%
	GGAGACCCATCAGAACAAAC+AGG	+	chr3_4:69271348-69271367	None:intergenic	50.0%
!	CATTCAGGTTCAGGGGAACA+TGG	-	chr3_4:69271480-69271499	Msa0517570:CDS	50.0%
	AGGGGAACATGGTTCATTGG+TGG	-	chr3_4:69271491-69271510	Msa0517570:CDS	50.0%
	CTTCTGACCGTACTTTCTCC+AGG	+	chr3_4:69271834-69271853	None:intergenic	50.0%
!	CTGGAGAAAGTACGGTCAGA+AGG	-	chr3_4:69271832-69271851	Msa0517570:intron	50.0%
	ACAAATTAACCCGCGCTAGC+TGG	-	chr3_4:69272598-69272617	Msa0517570:intron	50.0%
	AACACTATACCAGCTAGCGC+GGG	+	chr3_4:69272610-69272629	None:intergenic	50.0%
	TGCAACCTTGGTCATGCTTC+CGG	+	chr3_4:69272722-69272741	None:intergenic	50.0%
	GTCAGAACCTCCTTTGAGTG+AGG	+	chr3_4:69272900-69272919	None:intergenic	50.0%
	ACGACGACAATACTACTCCG+AGG	-	chr3_4:69272991-69273010	Msa0517570:CDS	50.0%
	GGAGTTACTTCAGGTGCACC+CGG	-	chr3_4:69272700-69272719	Msa0517570:CDS	55.0%
	GCAACCTTGGTCATGCTTCC+GGG	+	chr3_4:69272721-69272740	None:intergenic	55.0%
	GGAGTTACTTCAGGTGCACC+CGG	-	chr3_4:69272700-69272719	Msa0517570:CDS	55.0%
	GCAACCTTGGTCATGCTTCC+GGG	+	chr3_4:69272721-69272740	None:intergenic	55.0%
!	TGCACCCGGAAGCATGACCA+AGG	-	chr3_4:69272714-69272733	Msa0517570:CDS	60.0%
!	TGCACCCGGAAGCATGACCA+AGG	-	chr3_4:69272714-69272733	Msa0517570:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_4	gene	69271052	69273470	69271052	ID=Msa0517570;Name=Msa0517570
chr3_4	mRNA	69271052	69273470	69271052	ID=Msa0517570-mRNA-1;Parent=Msa0517570;Name=Msa0517570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=182\|1\|1\|1\|1\|1\|3\|277\|324
chr3_4	exon	69271052	69271821	69271052	ID=Msa0517570-mRNA-1:exon:18406;Parent=Msa0517570-mRNA-1
chr3_4	exon	69272643	69272744	69272643	ID=Msa0517570-mRNA-1:exon:18405;Parent=Msa0517570-mRNA-1
chr3_4	exon	69272909	69273470	69272909	ID=Msa0517570-mRNA-1:exon:18404;Parent=Msa0517570-mRNA-1
chr3_4	five_prime_UTR	69273289	69273470	69273289	ID=Msa0517570-mRNA-1:five_prime_utr;Parent=Msa0517570-mRNA-1
chr3_4	CDS	69272909	69273288	69272909	ID=Msa0517570-mRNA-1:cds;Parent=Msa0517570-mRNA-1
chr3_4	CDS	69272643	69272744	69272643	ID=Msa0517570-mRNA-1:cds;Parent=Msa0517570-mRNA-1
chr3_4	CDS	69271329	69271821	69271329	ID=Msa0517570-mRNA-1:cds;Parent=Msa0517570-mRNA-1
chr3_4	three_prime_UTR	69271052	69271328	69271052	ID=Msa0517570-mRNA-1:three_prime_utr;Parent=Msa0517570-mRNA-1

Gene Sequence

>Msa0517570

ATGAGTGTTATTTTACCTGAAACTGTCACTGCCAACAAAAAGAAGCTACTCATAAAAGAGCTTCTTCAGGGTAAAGAATATGCTACTCAGCTAAAACTTTTGCTTAAGAATCCTGTTTGTTCTGATGGGTCTCCTTCTGTTAAGGAATTGGTGGCTAATGTGTTGAGATCTTTCTCTGAGACTATTTCTGTGATGAATTCTACTGAAGATTGTAGTTTAGATGAGGTTGCTCAGAATCATGTGAATCATTCAGGTTCAGGGGAACATGGTTCATTGGTGGAAGTTTCTTGTAATGATGATTTGAAGTCTGAAGATACAAGTGAGAGTAAGAAGAGATTGTCGCCAACTACAAAGGATCGAAGAGGTTCCTACAAAAGAAGGAAAACAGATGAGACAAGGACCATAGTCTCTAAAACAATTGGTGACACTCATTCCTGGAGAAAGTACGGTCAGAAGGAAATCCTCAATTCTAATTTCCCAAGGAGTTACTTCAGGTGCACCCGGAAGCATGACCAAGGTTGCAAAGCAACCAAACAGGTACAATTGATAGAAGAGAATCCAGAAATGTACCAAATTACATACATTGGCTTTCACACATGCAAATCCACCCTACAAACTCCACAAATGGTCTCATTCTCTGAAGATACTAATTGGGATTCAATTCTTGTGAATTCTAATCCTCACTCAAAGGAGGTTCTGACAAATTATGATCAACAAGATTCACATGTTATTAGCTCAGAAAGGTCAATTGTGAAACAAGAATATCCCAACAACGACGACAATACTACTCCGAGGAGTGATGTTACTGACAACTTATTGGATCCTAATTTGTGGTCTGATTTTAAGGATTTTGAACTCTCCAAGGATATTGTGTATTCCTGCACTGAATCTCAAAATCTTGAAATTGATTTTGGGGTGTTTTCTTCTGATTTCAGCAATGATTTGATATATTTTGATGAAAGTCATTTGCTTTAA

Protein sequence

>Msa0517570

MSVILPETVTANKKKLLIKELLQGKEYATQLKLLLKNPVCSDGSPSVKELVANVLRSFSETISVMNSTEDCSLDEVAQNHVNHSGSGEHGSLVEVSCNDDLKSEDTSESKKRLSPTTKDRRGSYKRRKTDETRTIVSKTIGDTHSWRKYGQKEILNSNFPRSYFRCTRKHDQGCKATKQVQLIEENPEMYQITYIGFHTCKSTLQTPQMVSFSEDTNWDSILVNSNPHSKEVLTNYDQQDSHVISSERSIVKQEYPNNDDNTTPRSDVTDNLLDPNLWSDFKDFELSKDIVYSCTESQNLEIDFGVFSSDFSNDLIYFDESHLL*