AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0973520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0973520 MtrunA17_Chr6g0452371 95.745 517 21 1 425 941 3 518 0.0 944
Msa0973520 MtrunA17_Chr6g0452371 76.346 520 26 6 1 425 1 518 0.0 682
Msa0973520 MtrunA17_Chr6g0452391 87.234 517 65 1 425 941 1 516 0.0 859
Msa0973520 MtrunA17_Chr6g0452391 70.849 518 54 6 3 425 1 516 0.0 633
Msa0973520 MtrunA17_Chr6g0452451 73.559 503 113 5 424 913 2 497 0.0 710
Msa0973520 MtrunA17_Chr6g0452451 61.407 469 76 9 1 365 1 468 1.54e-176 522
Msa0973520 MtrunA17_Chr6g0452401 75.442 452 92 3 447 883 1 448 0.0 689
Msa0973520 MtrunA17_Chr6g0452401 64.336 429 66 6 26 367 21 449 1.82e-171 508
Msa0973520 MtrunA17_Chr6g0466811 66.019 515 142 6 434 947 21 503 0.0 645
Msa0973520 MtrunA17_Chr6g0466811 57.111 450 79 8 12 366 21 451 7.69e-154 463
Msa0973520 MtrunA17_Chr7g0215951 67.171 463 143 4 427 883 1 460 0.0 644
Msa0973520 MtrunA17_Chr7g0215951 55.076 463 104 11 5 366 1 460 3.66e-152 459
Msa0973520 MtrunA17_Chr4g0059811 57.708 506 196 8 429 919 8 510 0.0 589
Msa0973520 MtrunA17_Chr4g0059811 48.842 475 131 13 7 374 8 477 4.64e-133 410
Msa0973520 MtrunA17_Chr1g0155131 58.996 478 179 5 425 899 1 464 0.0 576
Msa0973520 MtrunA17_Chr1g0155131 49.574 470 141 11 3 382 1 464 3.29e-139 424
Msa0973520 MtrunA17_Chr6g0452411 76.216 370 71 3 527 883 1 366 0.0 567
Msa0973520 MtrunA17_Chr6g0452411 63.215 367 58 6 78 367 1 367 6.18e-141 426
Msa0973520 MtrunA17_Chr2g0292561 57.872 470 181 5 429 894 8 464 0.0 556
Msa0973520 MtrunA17_Chr2g0292561 47.732 463 148 10 7 383 8 462 1.09e-130 402
Msa0973520 MtrunA17_Chr1g0155121 52.155 464 206 5 429 882 3 460 3.09e-166 495
Msa0973520 MtrunA17_Chr1g0155121 42.765 463 156 11 7 365 3 460 8.16e-107 340
Msa0973520 MtrunA17_Chr6g0452361 81.333 300 29 3 637 936 1 273 6.90e-146 434
Msa0973520 MtrunA17_Chr6g0452361 71.127 284 30 6 161 420 18 273 6.49e-106 330
Msa0973520 MtrunA17_Chr6g0452481 70.533 319 75 5 616 933 2 302 3.01e-136 410
Msa0973520 MtrunA17_Chr6g0452481 68.519 270 63 7 162 417 41 302 1.20e-100 317
Msa0973520 MtrunA17_Chr4g0072491 44.470 443 234 6 429 863 3 441 9.28e-123 383
Msa0973520 MtrunA17_Chr4g0072491 35.837 466 203 9 7 377 3 467 1.17e-79 268
Msa0973520 MtrunA17_Chr5g0404651 39.192 495 259 8 430 912 13 477 8.08e-113 356
Msa0973520 MtrunA17_Chr5g0404651 31.568 491 237 10 8 410 13 492 6.82e-69 238
Msa0973520 MtrunA17_Chr2g0315921 40.638 470 228 12 436 891 14 446 1.11e-105 335
Msa0973520 MtrunA17_Chr2g0315921 36.085 424 199 10 12 375 35 446 7.19e-72 244
Msa0973520 MtrunA17_Chr2g0308991 40.181 443 239 9 427 863 4 426 5.09e-103 331
Msa0973520 MtrunA17_Chr2g0308991 33.410 434 198 11 5 356 4 428 6.58e-65 228
Msa0973520 MtrunA17_Chr2g0315991 38.956 498 248 12 434 922 13 463 3.12e-102 327
Msa0973520 MtrunA17_Chr2g0315991 35.146 478 216 14 12 419 13 466 3.32e-70 241
Msa0973520 MtrunA17_Chr2g0315911 40.041 482 235 13 436 904 16 456 4.82e-102 326
Msa0973520 MtrunA17_Chr2g0315911 36.512 430 209 10 12 387 37 456 3.84e-73 248
Msa0973520 MtrunA17_Chr8g0372701 38.689 473 259 9 435 903 28 473 2.23e-101 326
Msa0973520 MtrunA17_Chr8g0372701 33.971 418 189 9 36 386 76 473 2.36e-63 223
Msa0973520 MtrunA17_Chr2g0315971 41.037 463 233 10 434 891 7 434 6.63e-101 332
Msa0973520 MtrunA17_Chr2g0315971 48.592 284 114 6 602 883 450 703 3.92e-79 272
Msa0973520 MtrunA17_Chr2g0315971 38.015 413 193 10 17 377 35 436 7.32e-72 252
Msa0973520 MtrunA17_Chr2g0315971 49.065 214 92 4 164 367 498 704 1.56e-56 208
Msa0973520 MtrunA17_Chr2g0315981 39.167 480 257 10 434 907 7 457 7.51e-100 320
Msa0973520 MtrunA17_Chr2g0315981 36.364 396 186 10 38 377 58 443 4.57e-67 232
Msa0973520 MtrunA17_Chr2g0316041 42.092 411 202 9 487 891 1 381 9.80e-98 314
Msa0973520 MtrunA17_Chr2g0316041 37.371 388 185 9 38 374 1 381 9.80e-67 230
Msa0973520 MtrunA17_Chr5g0404661 37.449 486 265 12 425 894 19 481 8.51e-91 297
Msa0973520 MtrunA17_Chr5g0404661 38.166 338 151 8 74 354 117 453 1.27e-56 203
Msa0973520 MtrunA17_Chr2g0316021 36.810 489 230 12 434 918 7 420 7.36e-88 288
Msa0973520 MtrunA17_Chr2g0316021 32.000 450 199 13 12 408 30 425 1.94e-54 196
Msa0973520 MtrunA17_Chr3g0134831 45.033 302 148 5 584 884 4 288 1.44e-80 263
Msa0973520 MtrunA17_Chr3g0134831 38.028 284 124 6 135 366 4 287 2.94e-50 179
Msa0973520 MtrunA17_Chr3g0127381 30.342 468 257 12 430 883 2 414 6.37e-63 221
Msa0973520 MtrunA17_Chr3g0127381 27.020 396 192 10 32 367 57 415 1.83e-39 153
Msa0973520 MtrunA17_Chr7g0276031 32.921 404 209 11 485 883 59 405 6.92e-62 218
Msa0973520 MtrunA17_Chr7g0276031 27.094 406 188 12 23 366 46 405 5.32e-39 151
Msa0973520 MtrunA17_Chr8g0346371 30.425 447 259 12 462 902 35 435 3.23e-60 213
Msa0973520 MtrunA17_Chr8g0346371 26.786 392 202 12 32 367 53 415 7.22e-38 148
Msa0973520 MtrunA17_Chr6g0452351 58.678 121 49 1 433 552 20 140 6.94e-43 152
Msa0973520 MtrunA17_Chr6g0452351 49.587 121 33 2 11 103 20 140 3.63e-30 116
Msa0973520 MtrunA17_Chr1g0148871 60.741 135 48 3 750 882 2 133 3.95e-41 149
Msa0973520 MtrunA17_Chr1g0148871 65.060 83 28 1 273 355 34 115 2.29e-26 107
Msa0973520 MtrunA17_Chr5g0404671 52.294 109 48 2 777 884 1 106 4.52e-30 117
Msa0973520 MtrunA17_Chr5g0404671 55.422 83 36 1 273 354 6 88 9.21e-25 102
Msa0973520 MtrunA17_Chr5g0404681 41.935 124 62 1 568 691 39 152 2.98e-29 114
Msa0973520 MtrunA17_Chr5g0404681 36.842 114 38 2 119 198 39 152 5.29e-17 79.0
Msa0973520 MtrunA17_Chr5g0404691 38.286 175 81 5 711 884 2 150 6.50e-23 96.3
Msa0973520 MtrunA17_Chr5g0404691 39.695 131 66 3 225 354 14 132 3.58e-18 82.8
Msa0973520 MtrunA17_Chr1g0211521 51.429 105 49 2 810 913 5 108 3.99e-21 89.7
Msa0973520 MtrunA17_Chr1g0211521 44.000 125 55 5 301 424 5 115 1.08e-16 77.0
Msa0973520 MtrunA17_Chr1g0192151 32.105 190 96 6 643 823 180 345 3.31e-13 72.8
Msa0973520 MtrunA17_Chr4g0014731 32.105 190 96 6 643 823 181 346 3.64e-13 72.8
Msa0973520 MtrunA17_Chr7g0260601 30.052 193 104 6 632 816 242 411 1.43e-12 71.6
Msa0973520 MtrunA17_Chr8g0362771 28.641 206 125 6 611 814 218 403 4.84e-12 70.1
Msa0973520 MtrunA17_Chr3g0145011 31.429 175 89 6 657 823 166 317 5.48e-12 68.9
Msa0973520 MtrunA17_Chr6g0476861 27.517 298 170 13 627 902 194 467 1.46e-11 68.6
Msa0973520 MtrunA17_Chr2g0315961 41.558 77 44 1 301 377 1 76 4.25e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0973520 AT5G40010.1 62.609 460 162 5 427 879 4 460 0.0 592
Msa0973520 AT5G40010.1 49.130 460 129 11 5 362 4 460 5.49e-132 407
Msa0973520 AT3G28580.1 60.390 462 164 8 427 879 4 455 0.0 550
Msa0973520 AT3G28580.1 50.110 455 127 11 5 362 4 455 1.92e-129 400
Msa0973520 AT3G28510.1 59.219 461 186 2 428 888 5 463 0.0 535
Msa0973520 AT3G28510.1 47.289 461 146 7 6 371 5 463 2.74e-118 372
Msa0973520 AT3G28580.2 56.926 462 158 9 427 879 4 433 1.82e-170 505
Msa0973520 AT3G28580.2 50.113 441 126 9 5 362 4 433 2.51e-126 391
Msa0973520 AT3G28540.2 57.298 459 183 6 428 881 5 455 9.29e-167 497
Msa0973520 AT3G28540.2 47.277 459 134 10 6 364 5 455 1.85e-113 358
Msa0973520 AT3G28540.1 57.298 459 183 6 428 881 5 455 1.65e-166 496
Msa0973520 AT3G28540.1 47.277 459 134 10 6 364 5 455 2.70e-113 358
Msa0973520 AT3G28610.1 51.143 481 176 10 432 887 4 450 2.15e-160 479
Msa0973520 AT3G28610.1 44.186 430 123 12 26 370 53 450 2.42e-103 330
Msa0973520 AT3G28600.1 51.709 468 188 7 434 887 7 450 2.60e-158 474
Msa0973520 AT3G28600.1 44.903 412 145 9 26 370 54 450 1.23e-101 326
Msa0973520 AT5G40000.1 48.770 488 207 10 425 896 2 462 9.66e-151 454
Msa0973520 AT5G40000.1 38.431 497 175 12 3 398 2 468 5.02e-94 306
Msa0973520 AT3G28520.1 55.902 449 184 6 439 882 2 441 9.27e-149 449
Msa0973520 AT3G28520.1 48.869 442 143 11 21 392 41 469 1.45e-98 318
Msa0973520 AT3G28600.2 48.718 468 163 7 434 887 7 411 9.80e-140 424
Msa0973520 AT3G28600.2 44.216 389 142 12 26 370 54 411 9.53e-84 277
Msa0973520 AT3G28570.2 47.009 468 197 8 432 886 14 443 5.81e-139 423
Msa0973520 AT3G28570.2 38.344 459 149 11 10 366 14 440 8.66e-90 294
Msa0973520 AT3G28570.1 47.009 468 197 8 432 886 7 436 6.27e-139 423
Msa0973520 AT3G28570.1 38.344 459 149 11 10 366 7 433 8.59e-90 293
Msa0973520 AT5G57480.1 40.756 476 266 6 429 894 3 472 2.26e-121 380
Msa0973520 AT5G57480.1 33.474 475 207 10 7 386 3 463 2.46e-75 257
Msa0973520 AT4G25835.1 41.053 475 267 7 429 899 3 468 3.64e-120 376
Msa0973520 AT4G25835.1 33.761 468 216 9 7 382 3 468 2.89e-77 261
Msa0973520 AT4G30250.2 40.126 476 263 8 425 888 1 466 3.78e-110 350
Msa0973520 AT4G30250.2 33.778 450 197 10 3 356 1 445 1.29e-67 235
Msa0973520 AT4G30250.1 40.084 474 262 8 427 888 1 464 1.53e-109 348
Msa0973520 AT4G30250.1 33.705 448 196 10 5 356 1 443 5.08e-67 234
Msa0973520 AT3G50930.1 38.340 506 273 10 442 941 73 545 1.05e-104 337
Msa0973520 AT3G50930.1 34.904 467 207 13 36 430 114 555 3.13e-69 241
Msa0973520 AT3G50940.1 39.644 449 226 9 450 893 43 451 4.81e-104 332
Msa0973520 AT3G50940.1 36.641 393 184 9 38 376 70 451 3.34e-71 243
Msa0973520 AT2G18193.1 39.212 482 258 10 435 913 19 468 3.27e-101 325
Msa0973520 AT2G18193.1 33.775 453 192 14 21 396 43 464 1.46e-60 215
Msa0973520 AT5G17740.1 36.328 512 286 12 428 930 11 491 1.91e-99 322
Msa0973520 AT5G17740.1 35.971 417 189 12 42 390 73 479 1.19e-63 225
Msa0973520 AT4G05380.1 38.936 470 256 10 426 890 11 454 3.05e-97 314
Msa0973520 AT4G05380.1 35.035 431 195 13 21 380 44 460 1.35e-60 214
Msa0973520 AT5G17730.1 36.382 492 266 12 427 904 10 468 4.97e-97 313
Msa0973520 AT5G17730.1 35.279 377 163 10 41 356 72 428 3.91e-63 221
Msa0973520 AT5G17760.1 40.000 445 213 9 490 909 72 487 7.16e-96 311
Msa0973520 AT5G17760.1 36.300 427 196 11 41 397 72 492 2.43e-66 231
Msa0973520 AT2G18190.1 38.261 460 253 9 430 886 15 446 1.40e-94 308
Msa0973520 AT2G18190.1 31.954 435 185 11 8 354 15 426 6.72e-54 196
Msa0973520 AT1G43910.1 38.559 472 260 10 427 893 11 457 2.19e-92 301
Msa0973520 AT1G43910.1 35.750 400 190 9 35 376 67 457 1.22e-57 206
Msa0973520 AT5G17750.1 33.800 429 223 8 430 848 13 390 6.37e-79 262
Msa0973520 AT5G17750.1 30.846 402 184 12 8 339 13 390 7.62e-51 184
Msa0973520 AT2G46620.1 31.385 462 266 8 427 883 1 416 1.20e-67 234
Msa0973520 AT2G46620.1 28.101 395 192 10 32 366 54 416 3.83e-42 162
Msa0973520 AT5G17760.2 37.405 262 138 4 490 736 72 322 7.87e-50 180
Msa0973520 AT5G17760.2 33.202 253 112 6 41 238 72 322 1.38e-32 130
Msa0973520 AT3G28560.1 42.661 218 115 4 428 643 5 214 1.63e-46 167
Msa0973520 AT3G28560.1 38.624 189 94 3 6 173 5 192 3.99e-31 123
Msa0973520 AT3G29800.1 30.541 370 201 10 565 925 104 426 2.90e-44 167
Msa0973520 AT3G29800.1 30.169 295 115 8 116 354 104 363 2.52e-28 119
Msa0973520 AT4G05340.1 50.000 96 42 1 739 834 4 93 1.76e-22 93.2
Msa0973520 AT4G05340.1 43.750 96 37 2 241 325 4 93 5.26e-14 68.9
Msa0973520 AT1G09100.1 32.632 190 95 6 643 823 180 345 8.20e-14 75.1
Msa0973520 AT3G05530.1 32.105 190 96 6 643 823 181 346 3.53e-13 73.2

Find 131 sgRNAs with CRISPR-Local

Find 802 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGTAAGGTAACTCTTTC+TGG 0.086559 6_4:-5986569 Msa0973520:CDS
GAAAGTAAGGTAACTCTTTC+TGG 0.086559 6_4:-5997416 Msa0973520:intron
AAACGTGGTTATCTACTTTA+TGG 0.185533 6_4:-5986863 Msa0973520:CDS
AAACGTGGTTATCTACTTTA+TGG 0.185533 6_4:-5997710 Msa0973520:CDS
TTTGAGCATCCTGCAAGATT+TGG 0.271233 6_4:-5986986 Msa0973520:CDS
CAAAGTATGAAGATGGGAAT+TGG 0.285135 6_4:-5987601 Msa0973520:intron
CAAAGTATGAAGATGGGAAT+TGG 0.285135 6_4:-5998448 None:intergenic
ATGGTAGACTTTCCAGTTCC+TGG 0.297845 6_4:+5997683 None:intergenic
TCTTGAGATTGCAAAGAAAA+AGG 0.305733 6_4:-5997066 Msa0973520:CDS
CAAATAACCCTAGTAGTAAT+TGG 0.316335 6_4:-5987045 Msa0973520:CDS
ATAAAGTTTCATGAATTATC+AGG 0.317330 6_4:-5987433 Msa0973520:CDS
TGAGGAGGAAGCAAGGAAAA+AGG 0.320155 6_4:-5997042 Msa0973520:CDS
AAAGTATGAAGATGGGAATT+GGG 0.332092 6_4:-5987600 Msa0973520:intron
AAAGTATGAAGATGGGAATT+GGG 0.332092 6_4:-5998447 None:intergenic
AGAAAATATCTACGAAGATT+AGG 0.335237 6_4:+5987502 None:intergenic
AACTTGATCCTGCTCTTATA+AGG 0.349513 6_4:-5997313 Msa0973520:CDS
TAAGGTTGATGAAAAGTTAG+AGG 0.361170 6_4:-5986099 Msa0973520:CDS
AATGGATAAGCATATAGAAA+TGG 0.368048 6_4:-5997282 Msa0973520:CDS
GCTAGGTTTCCAAATCTTGC+AGG 0.369566 6_4:+5986977 None:intergenic
TTGTAGCTATCAAGCTTTCA+AGG 0.388003 6_4:-5997255 Msa0973520:CDS
TCCAATTATTGAAAAGTTGT+TGG 0.390561 6_4:-5986339 Msa0973520:CDS
TCCAATTATTGAAAAGTTGT+TGG 0.390561 6_4:-5997186 Msa0973520:CDS
CCAATTATTGAAAAGTTGTT+GGG 0.400795 6_4:-5986338 Msa0973520:CDS
CCAATTATTGAAAAGTTGTT+GGG 0.400795 6_4:-5997185 Msa0973520:CDS
AAAAGGATGAGGAGGAAGCA+AGG 0.404612 6_4:-5997049 Msa0973520:CDS
AGTTCAATGGAGTCAAAGTT+TGG 0.406209 6_4:-5987255 Msa0973520:CDS
AGTTCAATGGAGTCAAAGTT+TGG 0.406209 6_4:-5998102 Msa0973520:CDS
CTTTATGGTCCTCCAGGAAC+TGG 0.407812 6_4:-5986848 Msa0973520:CDS
TGAAACTTTATGTGGATGTA+TGG 0.409252 6_4:+5987445 None:intergenic
GGTTCTTGCAAGAAACTACT+TGG 0.415265 6_4:-5986387 Msa0973520:CDS
TTCTTTCTTCTTCCTTTGCC+CGG 0.416876 6_4:+5997508 None:intergenic
CTTTATGGTCCACCAGGAAC+TGG 0.417256 6_4:-5997695 Msa0973520:CDS
AAATCTTCAGTGATTGACTT+TGG 0.418717 6_4:+5986272 None:intergenic
AGAAAATATGCACGAAGATA+AGG 0.421661 6_4:+5998349 None:intergenic
AACATTTCAAAGTATGAAGA+TGG 0.422358 6_4:-5998455 None:intergenic
ATGGATAAGCATATAGAAAT+GGG 0.422830 6_4:-5997281 Msa0973520:CDS
CAACACATGTTGAATGTAAG+AGG 0.425064 6_4:+5987117 None:intergenic
CAACACATGTTGAATGTAAG+AGG 0.425064 6_4:+5997964 None:intergenic
CCAATTACTACTAGGGTTGT+TGG 0.427886 6_4:+5997892 None:intergenic
CTCTTACATTCAACATGTGT+TGG 0.428090 6_4:-5987116 Msa0973520:CDS
CTCTTACATTCAACATGTGT+TGG 0.428090 6_4:-5997963 Msa0973520:CDS
AAAGAGTATTATGCTAAAGT+TGG 0.429304 6_4:-5986896 Msa0973520:CDS
AAAGAGTATTATGCTAAAGT+TGG 0.429304 6_4:-5997743 Msa0973520:CDS
TGATGAAAAGTTAGAGGAAA+AGG 0.438341 6_4:-5986093 Msa0973520:CDS
TCTTGAGTTAACAACTGTTA+AGG 0.446059 6_4:-5986771 Msa0973520:CDS
TCTTGAGTTAACAACTGTTA+AGG 0.446059 6_4:-5997618 Msa0973520:CDS
AGTTTGCACTAAGATATGTT+TGG 0.446804 6_4:+5987374 None:intergenic
AGTTTGCACTAAGATATGTT+TGG 0.446804 6_4:+5998221 None:intergenic
ATTCAACATGTGTTGGATGA+AGG 0.453587 6_4:-5997956 Msa0973520:CDS
ATTCAACATGTGTTGGATGA+AGG 0.454671 6_4:-5987109 Msa0973520:CDS
GATCTTCTTAAGTTCAAGAA+AGG 0.458025 6_4:-5986920 Msa0973520:CDS
AGATGGGAATTGGGGAACTA+TGG 0.460698 6_4:-5987591 Msa0973520:CDS
AGATGGGAATTGGGGAACTA+TGG 0.460698 6_4:-5998438 Msa0973520:CDS
AACTTGATCCTGCTCTCATA+AGG 0.476557 6_4:-5986466 Msa0973520:CDS
GAGGAAAAGGTGAAGGAGAA+TGG 0.482194 6_4:-5986080 Msa0973520:CDS
ATGCTAAAGTTGGAAAAGCT+TGG 0.482796 6_4:-5986886 Msa0973520:CDS
ATGCTAAAGTTGGAAAAGCT+TGG 0.482796 6_4:-5997733 Msa0973520:CDS
TTCAACATGTGTTGGATGAA+GGG 0.485677 6_4:-5997955 Msa0973520:CDS
CTTCCCCTCCTTATAAGAGC+AGG 0.487071 6_4:+5997305 None:intergenic
ATTGACTCAAGAGGAAGAAA+AGG 0.488311 6_4:-5996967 Msa0973520:CDS
CTTCCCCTCCTTATGAGAGC+AGG 0.493116 6_4:+5986458 None:intergenic
AAGCTATTATGAGCAAGAAT+AGG 0.495148 6_4:-5987084 Msa0973520:CDS
GATCACTCAAGAGGAAGAAA+AGG 0.500014 6_4:-5986123 Msa0973520:CDS
AAGCTATTATGAGCAAGAAT+AGG 0.501969 6_4:-5997931 Msa0973520:CDS
CTCTCGATCTCACCGGGCAA+AGG 0.502496 6_4:-5986673 Msa0973520:CDS
CTCTCGATCTCACCGGGCAA+AGG 0.502496 6_4:-5997520 Msa0973520:CDS
TATCTACTTTATGGTCCTCC+AGG 0.505261 6_4:-5986854 Msa0973520:CDS
GACTTTGATTCAATCTCTTG+AGG 0.516280 6_4:-5986234 Msa0973520:CDS
GATTGTTCTCTCGATCTCAC+CGG 0.518830 6_4:-5986680 Msa0973520:CDS
GATTGTTCTCTCGATCTCAC+CGG 0.518830 6_4:-5997527 Msa0973520:CDS
ATAATTCATGAAACTTTATG+TGG 0.520872 6_4:+5987437 None:intergenic
ATTTGCTATAGCTGATATCA+TGG 0.523985 6_4:+5997664 None:intergenic
AAATTCTCAGCAACATCAGC+AGG 0.526229 6_4:+5986299 None:intergenic
AAATTCTCAGCAACATCAGC+AGG 0.526229 6_4:+5997146 None:intergenic
GAAATCATAGATGAGTTCAA+TGG 0.530945 6_4:-5987268 Msa0973520:CDS
GAAATCATAGATGAGTTCAA+TGG 0.530945 6_4:-5998115 Msa0973520:CDS
GAGAATGGTGTCAAAGAGAA+TGG 0.531190 6_4:-5986065 Msa0973520:CDS
TCTCATAAGGAGGGGAAGAA+TGG 0.535990 6_4:-5986453 Msa0973520:CDS
TCAAGAGGAAGAAAAGGTTA+AGG 0.538611 6_4:-5986117 Msa0973520:CDS
TCAAGAGGAAGAAAAGGTTA+AGG 0.538611 6_4:-5996961 Msa0973520:CDS
ACATCCACCAATTACTACTA+GGG 0.539649 6_4:+5997885 None:intergenic
TCATCCATGCTTAGAACAAG+TGG 0.540829 6_4:+5998145 None:intergenic
TCTTATAAGGAGGGGAAGAA+TGG 0.542051 6_4:-5997300 Msa0973520:CDS
ATTGTTCTCTCGATCTCACC+GGG 0.546404 6_4:-5986679 Msa0973520:CDS
ATTGTTCTCTCGATCTCACC+GGG 0.546404 6_4:-5997526 Msa0973520:CDS
TAACCCTAGTAGTAATTGGT+GGG 0.547641 6_4:-5987041 Msa0973520:CDS
AAATATCTACGAAGATTAGG+TGG 0.547924 6_4:+5987505 None:intergenic
AAAACCACTTGTTCTTAGCA+TGG 0.557204 6_4:-5987302 Msa0973520:CDS
GTTGGAAAAGCTTGGAAACG+TGG 0.566291 6_4:-5986878 Msa0973520:CDS
GTTGGAAAAGCTTGGAAACG+TGG 0.566291 6_4:-5997725 Msa0973520:CDS
AAAGTTAGAGGAAAAGGTGA+AGG 0.570385 6_4:-5986087 Msa0973520:CDS
CAACTAGGTTCAATCACGGC+TGG 0.570804 6_4:-5998412 Msa0973520:CDS
CATCCATGCTTAGAACAAGT+GGG 0.570942 6_4:+5998146 None:intergenic
TGATGAGAATGATGAAAAGA+AGG 0.571153 6_4:-5997474 Msa0973520:CDS
AAATATGCACGAAGATAAGG+TGG 0.571817 6_4:+5998352 None:intergenic
AACCCTAGTAGTAATTGGTG+GGG 0.572012 6_4:-5987040 Msa0973520:CDS
TCATCCATGCTAAGAACAAG+TGG 0.573558 6_4:+5987298 None:intergenic
AACCCCACTTGTTCTAAGCA+TGG 0.576665 6_4:-5998149 Msa0973520:CDS
ACAAGAATTGATCACTCAAG+AGG 0.581772 6_4:-5986132 Msa0973520:CDS
TGATGAGACTGATGAAAAGA+AGG 0.583033 6_4:-5986627 Msa0973520:CDS
AAGTATGAAGATGGGAATTG+GGG 0.585836 6_4:-5987599 Msa0973520:intron
AAGTATGAAGATGGGAATTG+GGG 0.585836 6_4:-5998446 None:intergenic
TTGATCCTGCTCTCATAAGG+AGG 0.589263 6_4:-5986463 Msa0973520:CDS
TGATCCTGCTCTTATAAGGA+GGG 0.590776 6_4:-5997309 Msa0973520:CDS
TGATCCTGCTCTCATAAGGA+GGG 0.594215 6_4:-5986462 Msa0973520:CDS
TCAATGGAGTCAAAGTTTGG+TGG 0.596166 6_4:-5987252 Msa0973520:CDS
TCAATGGAGTCAAAGTTTGG+TGG 0.596166 6_4:-5998099 Msa0973520:CDS
ACATTTCAAAGTATGAAGAT+GGG 0.598757 6_4:-5998454 None:intergenic
TTGATCCTGCTCTTATAAGG+AGG 0.600009 6_4:-5997310 Msa0973520:CDS
GGATGAGGAAGCTCGGCTCA+AGG 0.601592 6_4:-5997015 Msa0973520:CDS
AAGATTTGGAAACCTAGCTA+TGG 0.607202 6_4:-5986972 Msa0973520:CDS
GTAGACTTTCCAGTTCCTGG+TGG 0.611663 6_4:+5997686 None:intergenic
AGGTAGAGGATGAGGAAGCT+CGG 0.611983 6_4:-5997022 Msa0973520:CDS
GGATGAGGAAGCAAAGCTCA+AGG 0.616773 6_4:-5986168 Msa0973520:CDS
GAGAATGGTGTGAAAGAGAA+CGG 0.617159 6_4:-5986050 Msa0973520:CDS
TATCTACTTTATGGTCCACC+AGG 0.617929 6_4:-5997701 Msa0973520:CDS
ACCCTAGTAGTAATTGGTGG+GGG 0.617964 6_4:-5987039 Msa0973520:CDS
GGGGAACTATGGTCACAACT+AGG 0.620126 6_4:-5987580 Msa0973520:CDS
GGGGAACTATGGTCACAACT+AGG 0.620126 6_4:-5998427 Msa0973520:CDS
ATAACCCTAGTAGTAATTGG+TGG 0.620183 6_4:-5987042 Msa0973520:CDS
GATGGGATTTGGTCAGCATG+TGG 0.620826 6_4:-5986530 Msa0973520:CDS
GGTCAGCATGTGGATCAGAA+AGG 0.624596 6_4:-5986520 Msa0973520:CDS
AATATCTACGAAGATTAGGT+GGG 0.627753 6_4:+5987506 None:intergenic
GATCCTGCTCTCATAAGGAG+GGG 0.632718 6_4:-5986461 Msa0973520:CDS
ATCCATGCTTAGAACAAGTG+GGG 0.634090 6_4:+5998147 None:intergenic
GAGAATGGTGTCAAAGACAA+TGG 0.641961 6_4:-5996909 Msa0973520:CDS
GTCACAACTAGGTTCAATCA+CGG 0.654145 6_4:-5987569 Msa0973520:CDS
GTCACAACTAGGTTCAATCA+CGG 0.654145 6_4:-5998416 Msa0973520:CDS
GATCCTGCTCTTATAAGGAG+GGG 0.654308 6_4:-5997308 Msa0973520:CDS
AATATGCACGAAGATAAGGT+GGG 0.699030 6_4:+5998353 None:intergenic
GGTCAGCTTGTGGATCAGAG+AGG 0.714357 6_4:-5997367 Msa0973520:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GGATTTTTTTTTTTTTTTTT+TGG + chr6_4:5988052-5988071 None:intergenic 10.0%
!!! CAATAATAATAATTTTTTTG+GGG + chr6_4:5988296-5988315 None:intergenic 10.0%
!!! CTCAATAATAATAATTTTTT+TGG + chr6_4:5988298-5988317 None:intergenic 10.0%
!!! TAGCTAAATATTTTTTATTT+GGG + chr6_4:5988350-5988369 None:intergenic 10.0%
!!! TTAATAAATAAATTTGTTTG+AGG + chr6_4:5988373-5988392 None:intergenic 10.0%
!! AATAACTATTTAAAAAAGTT+AGG + chr6_4:5988658-5988677 None:intergenic 10.0%
!! CTAAAGTTAAATAAAATATT+AGG + chr6_4:5988744-5988763 None:intergenic 10.0%
!! CTTAAAAAGTTATAATTTAT+TGG - chr6_4:5988852-5988871 Msa0973520:intron 10.0%
!! AATAAAATGTTTAATTAAGT+TGG - chr6_4:5989926-5989945 Msa0973520:intron 10.0%
!! AAATATATAAAAACGAAAAA+TGG - chr6_4:5990082-5990101 Msa0973520:intron 10.0%
!!! AATAATTTTTTCATAAAGAA+TGG + chr6_4:5990203-5990222 None:intergenic 10.0%
!! TAAAAGCAAATATAAATTAA+AGG + chr6_4:5992033-5992052 None:intergenic 10.0%
!! TAGTATTATTAATAAAAAAG+AGG + chr6_4:5993587-5993606 None:intergenic 10.0%
!! AAATATGGTTAAAATATATA+TGG - chr6_4:5994115-5994134 Msa0973520:intron 10.0%
!! ATCTAAATATGAAAAAAAAT+TGG - chr6_4:5996162-5996181 Msa0973520:intron 10.0%
!!! TAAAATTCATTTTTTGATTA+AGG + chr6_4:5996545-5996564 None:intergenic 10.0%
!! CTAAATATTATTTAGATTAG+TGG + chr6_4:5987656-5987675 None:intergenic 15.0%
!! ACATTATAATAGATAAAGAT+AGG + chr6_4:5987768-5987787 None:intergenic 15.0%
!! ATCTTTATCTATTATAATGT+AGG - chr6_4:5987768-5987787 Msa0973520:intron 15.0%
!! GAATAAAAGAAATAAGTTAA+GGG + chr6_4:5987812-5987831 None:intergenic 15.0%
!! TGAATAAAAGAAATAAGTTA+AGG + chr6_4:5987813-5987832 None:intergenic 15.0%
!!! CTTATTTCTTTTATTCAATT+TGG - chr6_4:5987816-5987835 Msa0973520:intron 15.0%
!! GAATAAAAGAAATAAGTTAA+GGG + chr6_4:5987812-5987831 None:intergenic 15.0%
!! TGAATAAAAGAAATAAGTTA+AGG + chr6_4:5987813-5987832 None:intergenic 15.0%
!!! CTTATTTCTTTTATTCAATT+TGG - chr6_4:5987816-5987835 Msa0973520:intron 15.0%
!! ATTATTATTATTGAGTATGT+TGG - chr6_4:5988303-5988322 Msa0973520:intron 15.0%
!!! AGCTAAATATTTTTTATTTG+GGG + chr6_4:5988349-5988368 None:intergenic 15.0%
!!! GTAGCTAAATATTTTTTATT+TGG + chr6_4:5988351-5988370 None:intergenic 15.0%
!!! AATAGTTATTGTCAATTTTT+AGG - chr6_4:5988668-5988687 Msa0973520:intron 15.0%
!!! ATAGTTATTGTCAATTTTTA+GGG - chr6_4:5988669-5988688 Msa0973520:intron 15.0%
!! ATATGAAATGTTTAAATGTT+AGG - chr6_4:5989693-5989712 Msa0973520:intron 15.0%
!!! TCGTTTTTATATATTTTCTT+TGG + chr6_4:5990078-5990097 None:intergenic 15.0%
!! GTATTTGAACATTATTTATT+TGG - chr6_4:5990104-5990123 Msa0973520:intron 15.0%
!!! TTATTTATTTTTACTGTAGA+AGG + chr6_4:5990622-5990641 None:intergenic 15.0%
!!! TCATTTATACTTTTTTTTCA+TGG + chr6_4:5992599-5992618 None:intergenic 15.0%
!!! TGAAAAAAAAGTATAAATGA+TGG - chr6_4:5992599-5992618 Msa0973520:intron 15.0%
!! ATGTTTACATATGAAAAAAT+TGG - chr6_4:5993106-5993125 Msa0973520:intron 15.0%
!! AGAGGAAAATAAAAAATTAT+GGG + chr6_4:5993569-5993588 None:intergenic 15.0%
!! AAGAGGAAAATAAAAAATTA+TGG + chr6_4:5993570-5993589 None:intergenic 15.0%
!! AAATTAAGATACTTTGTATT+TGG - chr6_4:5994033-5994052 Msa0973520:intron 15.0%
!!! ATTTTAAGTTGACAATAAAA+TGG + chr6_4:5994099-5994118 None:intergenic 15.0%
!! TTTATTGTCAACTTAAAATA+TGG - chr6_4:5994100-5994119 Msa0973520:intron 15.0%
!! TAAATTAAGTTTAAGTGTAT+TGG - chr6_4:5994258-5994277 Msa0973520:intron 15.0%
!!! ATCAAATATGAAATTTTGAT+AGG + chr6_4:5994379-5994398 None:intergenic 15.0%
!!! TTGTTTTGTTTTATTTTGTT+TGG + chr6_4:5994843-5994862 None:intergenic 15.0%
!!! ATATGTGATTTTTTTTTAGA+CGG + chr6_4:5996503-5996522 None:intergenic 15.0%
!!! TGAATTTTATTGATGGAATT+TGG - chr6_4:5987091-5987110 Msa0973520:CDS 20.0%
!!! AATTTTCACAACAAATTTTG+TGG - chr6_4:5987140-5987159 Msa0973520:CDS 20.0%
!! ATTAATCCAATCCAAATTAA+TGG + chr6_4:5987602-5987621 None:intergenic 20.0%
!! GGGATTAAAATTATCAAAAT+TGG + chr6_4:5987903-5987922 None:intergenic 20.0%
!! AAGAAGAACCTAAATAAATT+AGG + chr6_4:5987985-5988004 None:intergenic 20.0%
!! AGAAAGTTAAGAAATTACAT+GGG - chr6_4:5988408-5988427 Msa0973520:intron 20.0%
!!! TCAATTTTTAGGGTTAAATT+TGG - chr6_4:5988679-5988698 Msa0973520:intron 20.0%
!!! TTTTAATTTAGTGTTGTTGA+TGG + chr6_4:5989048-5989067 None:intergenic 20.0%
!! TAAATGTTAGGTAATATGTA+TGG - chr6_4:5989705-5989724 Msa0973520:intron 20.0%
!! AGTAATACAAATAGAATTGT+AGG + chr6_4:5990514-5990533 None:intergenic 20.0%
!!! GAAATAGTACTTCTTTTTAT+TGG + chr6_4:5990814-5990833 None:intergenic 20.0%
!!! CTTTTTTTTTACCACATTTA+TGG - chr6_4:5991512-5991531 Msa0973520:intron 20.0%
!! AAATTAAAGGAACAAAATTG+AGG + chr6_4:5992020-5992039 None:intergenic 20.0%
!!! AAGTATAAATGATGGAATTT+TGG - chr6_4:5992607-5992626 Msa0973520:intron 20.0%
!!! TTTTTTCAGATTTTGTAATC+CGG + chr6_4:5993256-5993275 None:intergenic 20.0%
!!! CATTTTCATGTTGAAATTTT+GGG - chr6_4:5993411-5993430 Msa0973520:intron 20.0%
!!! TTGAATTTTCATCACAAATT+TGG - chr6_4:5993511-5993530 Msa0973520:intron 20.0%
!! GAGGAAAATAAAAAATTATG+GGG + chr6_4:5993568-5993587 None:intergenic 20.0%
!! AAATAAATGTCTTCTTCTAT+AGG - chr6_4:5993754-5993773 Msa0973520:intron 20.0%
!!! CTTTTTGTCACATTAAAAAA+AGG - chr6_4:5993906-5993925 Msa0973520:intron 20.0%
!!! AAAAAAGAGAGTTGATTATA+TGG + chr6_4:5993941-5993960 None:intergenic 20.0%
!!! ATATGGAGTGTTTTTAAAAT+TGG - chr6_4:5994132-5994151 Msa0973520:intron 20.0%
!! GATGAAGAAAATACTAATAA+AGG - chr6_4:5994204-5994223 Msa0973520:intron 20.0%
!! TTTATGAAATAATAGCCAAT+TGG - chr6_4:5994672-5994691 Msa0973520:intron 20.0%
!! TATAAACCAATATGACAAAA+GGG + chr6_4:5994707-5994726 None:intergenic 20.0%
!!! TATTTTGTTTGGTTCTTTTT+GGG + chr6_4:5994832-5994851 None:intergenic 20.0%
!!! TTATTTTGTTTGGTTCTTTT+TGG + chr6_4:5994833-5994852 None:intergenic 20.0%
!! AAAACAATTAGAAACTCAAA+AGG - chr6_4:5994856-5994875 Msa0973520:intron 20.0%
!!! TTTGATTTATGTAGTTATAC+TGG + chr6_4:5994898-5994917 Msa0973530:CDS 20.0%
!! CACATTCTATTTGAATAAAA+TGG + chr6_4:5995219-5995238 Msa0973530:CDS 20.0%
!!! TTTCTTCTTTTGAGTTTATA+AGG + chr6_4:5995359-5995378 Msa0973530:CDS 20.0%
!!! TTCTGTTATGATATTTCTAA+AGG - chr6_4:5995474-5995493 Msa0973520:intron 20.0%
!!! TCTGTTATGATATTTCTAAA+GGG - chr6_4:5995475-5995494 Msa0973520:intron 20.0%
!!! TGGATATTGAATATGTTTTA+AGG + chr6_4:5996441-5996460 None:intergenic 20.0%
!!! GGTATTGAAACATTATTATT+TGG + chr6_4:5996616-5996635 None:intergenic 20.0%
!! GAAAATATAAAGAACCTAAT+TGG - chr6_4:5996713-5996732 Msa0973520:intron 20.0%
!!! AAAATACTTTGAAGTGTTTT+TGG + chr6_4:5996839-5996858 None:intergenic 20.0%
!!! TTCATACTTTGAAATGTTTT+TGG + chr6_4:5996869-5996888 None:intergenic 20.0%
!! ATAATTCATGAAACTTTATG+TGG + chr6_4:5997045-5997064 None:intergenic 20.0%
!! ATAAAGTTTCATGAATTATC+AGG - chr6_4:5997046-5997065 Msa0973520:CDS 20.0%
!!! GTTTGTTGAATTTTATTGAT+GGG - chr6_4:5997932-5997951 Msa0973520:CDS 20.0%
!!! AATTTTCACAACAAATTTTG+TGG - chr6_4:5987140-5987159 Msa0973520:CDS 20.0%
! TGAAACTTTATGTTGATGTA+TGG + chr6_4:5986190-5986209 None:intergenic 25.0%
! ATAAAGTTTCATGAGTTATC+AGG - chr6_4:5986199-5986218 Msa0973520:CDS 25.0%
!! AGAAAATGATTGTGATTTTG+AGG + chr6_4:5986422-5986441 None:intergenic 25.0%
!!! AATCTTTTTTCATCTGAAGT+AGG + chr6_4:5986451-5986470 None:intergenic 25.0%
!!! AAAGAGTATTATGCTAAAGT+TGG - chr6_4:5986736-5986755 Msa0973520:CDS 25.0%
!!! TCTTTTTCAGCTTTCTTAAT+AGG + chr6_4:5987033-5987052 None:intergenic 25.0%
! AGAAGAGAAAAATGAAAGTA+AGG - chr6_4:5987050-5987069 Msa0973520:CDS 25.0%
! AATGGATAAGCATATAGAAA+TGG - chr6_4:5987197-5987216 Msa0973520:CDS 25.0%
! ATGGATAAGCATATAGAAAT+GGG - chr6_4:5987198-5987217 Msa0973520:CDS 25.0%
! TCCAATTATTGAAAAGTTGT+TGG - chr6_4:5987293-5987312 Msa0973520:CDS 25.0%
! CCAATTATTGAAAAGTTGTT+GGG - chr6_4:5987294-5987313 Msa0973520:CDS 25.0%
!!! TAAGGTTGATGAAAAATTAG+AGG - chr6_4:5987536-5987555 Msa0973520:CDS 25.0%
! AAAATTAGAGGAAAAAGTGA+AGG - chr6_4:5987548-5987567 Msa0973520:CDS 25.0%
! TTGAGAAAGTTAAGACTTAT+GGG + chr6_4:5987843-5987862 None:intergenic 25.0%
! TTTGAGAAAGTTAAGACTTA+TGG + chr6_4:5987844-5987863 None:intergenic 25.0%
!!! ATTCAACGGTCTTTTTTTTA+GGG + chr6_4:5987924-5987943 None:intergenic 25.0%
!!! AATTCAACGGTCTTTTTTTT+AGG + chr6_4:5987925-5987944 None:intergenic 25.0%
! AAAAAAAGACCGTTGAATTA+CGG - chr6_4:5987926-5987945 Msa0973520:intron 25.0%
! AACCTAAATAAATTAGGTGT+TGG + chr6_4:5987979-5987998 None:intergenic 25.0%
! ATTTATCTAAGAAGTGATGA+AGG + chr6_4:5988102-5988121 None:intergenic 25.0%
! GAGAAAGTTAAGAAATTACA+TGG - chr6_4:5988407-5988426 Msa0973520:intron 25.0%
! TTCAGTCTCAATAAGAAATT+TGG - chr6_4:5988463-5988482 Msa0973520:intron 25.0%
! ATCTTGATAAGAGCAAATTA+AGG + chr6_4:5988768-5988787 None:intergenic 25.0%
!! TTCATCAATGAGAGATTTTA+GGG + chr6_4:5989105-5989124 None:intergenic 25.0%
! ATTGAAAATGATTGTGTTCT+TGG - chr6_4:5989284-5989303 Msa0973520:intron 25.0%
! TTGAAAATGATTGTGTTCTT+GGG - chr6_4:5989285-5989304 Msa0973520:intron 25.0%
! ATTTCTCATAGAAGGTTATT+TGG - chr6_4:5989510-5989529 Msa0973520:intron 25.0%
! CATTTCATATCATAAGAGAT+GGG + chr6_4:5989683-5989702 None:intergenic 25.0%
! ACATTTCATATCATAAGAGA+TGG + chr6_4:5989684-5989703 None:intergenic 25.0%
! GTTTATACAACACAAAAGTT+AGG + chr6_4:5989738-5989757 None:intergenic 25.0%
! TTGTGTTGTATAAACTCAAA+AGG - chr6_4:5989743-5989762 Msa0973520:intron 25.0%
! TTGTGTCTTATAGTAAAACA+TGG + chr6_4:5989885-5989904 None:intergenic 25.0%
! ATTAAACTCATCAAAAAGAG+TGG - chr6_4:5990004-5990023 Msa0973520:intron 25.0%
!! ACATTATTTATTTGGAATGC+CGG - chr6_4:5990112-5990131 Msa0973520:intron 25.0%
!! ACGATATATTTTGTCTTACT+GGG + chr6_4:5990150-5990169 None:intergenic 25.0%
!! AACGATATATTTTGTCTTAC+TGG + chr6_4:5990151-5990170 None:intergenic 25.0%
! TTAATAGAAAGCCAAAGTAA+AGG - chr6_4:5990421-5990440 Msa0973520:intron 25.0%
!! ATTTTTACTGTAGAAGGTAA+GGG + chr6_4:5990616-5990635 None:intergenic 25.0%
!!! TATTTTTACTGTAGAAGGTA+AGG + chr6_4:5990617-5990636 None:intergenic 25.0%
!! TTTTAGACACAATTCTCTAA+TGG - chr6_4:5990693-5990712 Msa0973520:intron 25.0%
!!! ATTTTCATTGTTGATGGATT+CGG + chr6_4:5990788-5990807 None:intergenic 25.0%
! GTTAGATCAAGATCAAATAA+TGG - chr6_4:5990933-5990952 Msa0973520:intron 25.0%
!! TTCTCAAGAACACATTTTTA+TGG - chr6_4:5991437-5991456 Msa0973520:intron 25.0%
!!! TAAAGTTTGTTAAAAACGTG+TGG + chr6_4:5991490-5991509 None:intergenic 25.0%
! AAAGAAAGAAGAGAAATAGA+GGG + chr6_4:5991634-5991653 None:intergenic 25.0%
! AAAAGAAAGAAGAGAAATAG+AGG + chr6_4:5991635-5991654 None:intergenic 25.0%
! TTCTTTCTATATTCTCTTTG+TGG - chr6_4:5991659-5991678 Msa0973520:intron 25.0%
!! AAAAAGTGATCAATTTTCGT+CGG - chr6_4:5991683-5991702 Msa0973520:intron 25.0%
! CAGGTTTATAATTATCTCAA+GGG + chr6_4:5991747-5991766 None:intergenic 25.0%
! ACAGGTTTATAATTATCTCA+AGG + chr6_4:5991748-5991767 None:intergenic 25.0%
!!! AATCTACTTATTTTCTCCTT+GGG + chr6_4:5991922-5991941 None:intergenic 25.0%
!!! AAATCTACTTATTTTCTCCT+TGG + chr6_4:5991923-5991942 None:intergenic 25.0%
!!! AATGATGGAATTTTGGATTT+TGG - chr6_4:5992614-5992633 Msa0973520:intron 25.0%
!! GATTTTGGATGTAAAAATCA+TGG - chr6_4:5992629-5992648 Msa0973520:intron 25.0%
! TTGAGCAAGAAAAACTTAAT+AGG - chr6_4:5992670-5992689 Msa0973520:intron 25.0%
! TTCATGTTACAAACTAACAA+AGG - chr6_4:5992858-5992877 Msa0973520:intron 25.0%
! TCATGTTACAAACTAACAAA+GGG - chr6_4:5992859-5992878 Msa0973520:intron 25.0%
!!! ATTTTTTCACCCTTTAACAA+AGG - chr6_4:5993286-5993305 Msa0973520:intron 25.0%
!! AATTTCCGGATTTTATAATC+CGG + chr6_4:5993323-5993342 None:intergenic 25.0%
! TATAAAATCCGGAAATTCAA+AGG - chr6_4:5993326-5993345 Msa0973520:intron 25.0%
!!! AAGGCATTTTTGGAAAAAAT+AGG - chr6_4:5993345-5993364 Msa0973520:intron 25.0%
!!! AGGCATTTTTGGAAAAAATA+GGG - chr6_4:5993346-5993365 Msa0973520:intron 25.0%
!! GCATTTTCATGTTGAAATTT+TGG - chr6_4:5993410-5993429 Msa0973520:intron 25.0%
! TAAAAGGTTAAAAGGACATA+TGG - chr6_4:5993697-5993716 Msa0973520:intron 25.0%
! AAAAGGTTAAAAGGACATAT+GGG - chr6_4:5993698-5993717 Msa0973520:intron 25.0%
! TTCTATTATTTGTATGATGC+CGG + chr6_4:5994068-5994087 None:intergenic 25.0%
! AGTTGACAATAAAATGGAAA+AGG + chr6_4:5994093-5994112 None:intergenic 25.0%
! AGAAAATACTAATAAAGGAG+AGG - chr6_4:5994209-5994228 Msa0973520:intron 25.0%
!! ATTTCATATTTGATTCGTCT+CGG - chr6_4:5994385-5994404 Msa0973520:intron 25.0%
! AGAATAGTCCATATTAAATG+CGG - chr6_4:5994421-5994440 Msa0973520:intron 25.0%
! CATAATATGTATAATTTCCG+AGG - chr6_4:5994572-5994591 Msa0973520:intron 25.0%
! CTATAAACCAATATGACAAA+AGG + chr6_4:5994708-5994727 None:intergenic 25.0%
!!! ATTTTGTTTGGTTCTTTTTG+GGG + chr6_4:5994831-5994850 None:intergenic 25.0%
! TCATAAACTTTCAACCAAAA+TGG + chr6_4:5995108-5995127 Msa0973530:CDS 25.0%
! AATTCAAACATATGATTGCA+AGG - chr6_4:5995173-5995192 Msa0973520:intron 25.0%
! TGTGATTATTGTCAACTATT+TGG - chr6_4:5995235-5995254 Msa0973520:intron 25.0%
!! TGTAACTGCTGTTTAATTAA+TGG - chr6_4:5995283-5995302 Msa0973520:intron 25.0%
! AAATATCATAACAGAAGAGA+AGG + chr6_4:5995470-5995489 None:intergenic 25.0%
!! CTGTTATGATATTTCTAAAG+GGG - chr6_4:5995476-5995495 Msa0973520:intron 25.0%
!! ATTTTGAATTTGAGTGATTC+TGG + chr6_4:5995830-5995849 None:intergenic 25.0%
!!! AGCTTTGTTTTGAAAAACTA+AGG - chr6_4:5996110-5996129 Msa0973520:intron 25.0%
! ATCTGTAATCTACATGAAAA+AGG - chr6_4:5996137-5996156 Msa0973520:intron 25.0%
! AAGCAAATGAAGTTTAATTG+TGG - chr6_4:5996307-5996326 Msa0973520:intron 25.0%
! AGCAAATGAAGTTTAATTGT+GGG - chr6_4:5996308-5996327 Msa0973520:intron 25.0%
! TTCACAACCATTAGATTTAT+TGG + chr6_4:5996369-5996388 None:intergenic 25.0%
!!! ATGTTTTAAGGCATAAGTTA+TGG + chr6_4:5996429-5996448 None:intergenic 25.0%
! TCCACTAAATCACATATTAT+TGG - chr6_4:5996457-5996476 Msa0973520:intron 25.0%
! TCCAATAATATGTGATTTAG+TGG + chr6_4:5996461-5996480 None:intergenic 25.0%
!!! TGGATCACTTTTTAGATTTT+TGG - chr6_4:5996477-5996496 Msa0973520:intron 25.0%
!! TTTTACTATATGACAAGAGT+TGG + chr6_4:5996670-5996689 None:intergenic 25.0%
!! ATATTTTCTTGTGAGTTTCT+TGG + chr6_4:5996701-5996720 None:intergenic 25.0%
! TTGTGTTGTATGAACTAAAA+GGG + chr6_4:5996801-5996820 None:intergenic 25.0%
! TTTGTGTTGTATGAACTAAA+AGG + chr6_4:5996802-5996821 None:intergenic 25.0%
! AACATTTCAAAGTATGAAGA+TGG - chr6_4:5996871-5996890 Msa0973520:intron 25.0%
! ACATTTCAAAGTATGAAGAT+GGG - chr6_4:5996872-5996891 Msa0973520:intron 25.0%
! AGAAAATATCTACGAAGATT+AGG + chr6_4:5996980-5996999 None:intergenic 25.0%
!! AGAAAATGATTGTGATTTTG+AGG + chr6_4:5986422-5986441 None:intergenic 25.0%
!!! AATCTTTTTTCATCTGAAGT+AGG + chr6_4:5986451-5986470 None:intergenic 25.0%
!!! AAAATCTCTTGTTTCTTTTC+TGG + chr6_4:5997535-5997554 None:intergenic 25.0%
!!! AAAGAGTATTATGCTAAAGT+TGG - chr6_4:5986736-5986755 Msa0973520:CDS 25.0%
!!! TCTTTTTCAGCTTTCTTAAT+AGG + chr6_4:5987033-5987052 None:intergenic 25.0%
! AGAAGAGAAAAATGAAAGTA+AGG - chr6_4:5987050-5987069 Msa0973520:CDS 25.0%
!!! GGTTTGTTGAATTTTATTGA+TGG - chr6_4:5997931-5997950 Msa0973520:CDS 25.0%
!! TGAATTTTATTGATGGGATT+TGG - chr6_4:5997938-5997957 Msa0973520:CDS 25.0%
! TCCAATTATTGAAAAGTTGT+TGG - chr6_4:5987293-5987312 Msa0973520:CDS 25.0%
! CCAATTATTGAAAAGTTGTT+GGG - chr6_4:5987294-5987313 Msa0973520:CDS 25.0%
! TCTTGAGGAAAAAAAGAAAA+AGG - chr6_4:5998260-5998279 Msa0973520:CDS 25.0%
TGGGAAAAATTTGTCAAACA+TGG + chr6_4:5986110-5986129 None:intergenic 30.0%
AGAAAATATGCACGAAGATA+AGG + chr6_4:5986133-5986152 None:intergenic 30.0%
AGTTTGCACTAAGATATGTT+TGG + chr6_4:5986261-5986280 None:intergenic 30.0%
GAAATCATAGATGAGTTCAA+TGG - chr6_4:5986364-5986383 Msa0973520:CDS 30.0%
!! AAATGATTGTGATTTTGAGG+TGG + chr6_4:5986419-5986438 None:intergenic 30.0%
!! ATGCTTTTTGTGGAAAGTTA+GGG + chr6_4:5986479-5986498 None:intergenic 30.0%
AAGCTATTATGAGCAAGAAT+AGG - chr6_4:5986548-5986567 Msa0973520:CDS 30.0%
! AGAATCTCTTCTTTCTTTTC+TGG + chr6_4:5986688-5986707 None:intergenic 30.0%
GATCTTCTTAAGTTCAAGAA+AGG - chr6_4:5986712-5986731 Msa0973520:CDS 30.0%
AAACGTGGTTATCTACTTTA+TGG - chr6_4:5986769-5986788 Msa0973520:CDS 30.0%
!! ATTTGCTATAGCTGATATCA+TGG + chr6_4:5986818-5986837 None:intergenic 30.0%
TCTTGAGTTAACAACTGTTA+AGG - chr6_4:5986861-5986880 Msa0973520:CDS 30.0%
TGATGAGAATGATGAAAAGA+AGG - chr6_4:5987005-5987024 Msa0973520:CDS 30.0%
!!! GGTTTGCTGAATTTTATTGA+TGG - chr6_4:5987084-5987103 Msa0973520:CDS 30.0%
! CCCAACAACTTTTCAATAAT+TGG + chr6_4:5987297-5987316 None:intergenic 30.0%
! AAATCTTCAGTGATTGACTT+TGG + chr6_4:5987363-5987382 None:intergenic 30.0%
TCTTGAGATTGCAAAGAAAA+AGG - chr6_4:5987413-5987432 Msa0973520:CDS 30.0%
! GAAACAAAAATTGACTCAAG+AGG - chr6_4:5987503-5987522 Msa0973520:CDS 30.0%
!! AATGGTGTCATCCATTAATT+TGG - chr6_4:5987588-5987607 Msa0973520:CDS 30.0%
! TGTCATCCATTAATTTGGAT+TGG - chr6_4:5987593-5987612 Msa0973520:intron 30.0%
AAAGAAATAAGTTAAGGGAC+CGG + chr6_4:5987807-5987826 None:intergenic 30.0%
!!! TTCAACGGTCTTTTTTTTAG+GGG + chr6_4:5987923-5987942 None:intergenic 30.0%
AAAAAAGACCGTTGAATTAC+GGG - chr6_4:5987927-5987946 Msa0973520:intron 30.0%
CACCAACACCTAATTTATTT+AGG - chr6_4:5987974-5987993 Msa0973520:intron 30.0%
ATGAAGATGATGAAATTTGC+TGG + chr6_4:5988019-5988038 None:intergenic 30.0%
AAACAGAAGCTTGTAAAAAC+AGG - chr6_4:5988134-5988153 Msa0973520:intron 30.0%
ACCAAAAACACTCATTGTTT+AGG - chr6_4:5988794-5988813 Msa0973520:intron 30.0%
! CTAGCGTAAATTTTATGTAG+GGG + chr6_4:5988950-5988969 None:intergenic 30.0%
! GCTAGCGTAAATTTTATGTA+GGG + chr6_4:5988951-5988970 None:intergenic 30.0%
! AGCTAGCGTAAATTTTATGT+AGG + chr6_4:5988952-5988971 None:intergenic 30.0%
!! ATGAGAGATTTTAGGGATTT+TGG + chr6_4:5989098-5989117 None:intergenic 30.0%
! CTTCATCAATGAGAGATTTT+AGG + chr6_4:5989106-5989125 None:intergenic 30.0%
CTAAAATCTCTCATTGATGA+AGG - chr6_4:5989104-5989123 Msa0973520:intron 30.0%
! AATGAAGAATAGGGATTTTG+GGG + chr6_4:5989150-5989169 None:intergenic 30.0%
! CAATGAAGAATAGGGATTTT+GGG + chr6_4:5989151-5989170 None:intergenic 30.0%
! ACAATGAAGAATAGGGATTT+TGG + chr6_4:5989152-5989171 None:intergenic 30.0%
GGCAATAACAATGAAGAATA+GGG + chr6_4:5989159-5989178 None:intergenic 30.0%
AGGCAATAACAATGAAGAAT+AGG + chr6_4:5989160-5989179 None:intergenic 30.0%
! ATGTCTTTTATGGAAGGTTA+GGG - chr6_4:5989229-5989248 Msa0973520:intron 30.0%
! AATCTTTTCTCATCTGACTT+AGG - chr6_4:5989257-5989276 Msa0973520:intron 30.0%
! ATCTTTTCTCATCTGACTTA+GGG - chr6_4:5989258-5989277 Msa0973520:intron 30.0%
TGAAAATGATTGTGTTCTTG+GGG - chr6_4:5989286-5989305 Msa0973520:intron 30.0%
ATAACCTTCTATGAGAAATC+AGG + chr6_4:5989509-5989528 None:intergenic 30.0%
TAGAAGGTTATTTGGATGTA+AGG - chr6_4:5989518-5989537 Msa0973520:intron 30.0%
AGAAGGTTATTTGGATGTAA+GGG - chr6_4:5989519-5989538 Msa0973520:intron 30.0%
AGATGGGAATTAGTGAAATA+TGG + chr6_4:5989667-5989686 None:intergenic 30.0%
! AAAGGTGTGTGGTATTTATA+AGG - chr6_4:5989761-5989780 Msa0973520:intron 30.0%
TACTGGGAAAAATATGTAAC+CGG + chr6_4:5990134-5990153 None:intergenic 30.0%
TTTCATAAAGAATGGTGCAA+AGG + chr6_4:5990195-5990214 None:intergenic 30.0%
! CACTCTCTATCACTTTAAAA+AGG + chr6_4:5990308-5990327 None:intergenic 30.0%
TTCTATTAATGCTCTGTAAC+TGG + chr6_4:5990381-5990400 None:intergenic 30.0%
AAAGCCAAAGTAAAGGAAAA+TGG - chr6_4:5990428-5990447 Msa0973520:intron 30.0%
TCATCTTTGTTAATGCAGTT+TGG - chr6_4:5990456-5990475 Msa0973520:intron 30.0%
! TTTTTACTGTAGAAGGTAAG+GGG + chr6_4:5990615-5990634 None:intergenic 30.0%
ATGTTGAAAAACTAGAGACT+CGG + chr6_4:5990739-5990758 None:intergenic 30.0%
!!! TTTTCATTGTTGATGGATTC+GGG + chr6_4:5990787-5990806 None:intergenic 30.0%
!! TGGCTTATTTTCATTGTTGA+TGG + chr6_4:5990794-5990813 None:intergenic 30.0%
ATCCTCCAAACTTAATCTAA+TGG - chr6_4:5990991-5991010 Msa0973520:intron 30.0%
AACGACCATTAGATTAAGTT+TGG + chr6_4:5990999-5991018 None:intergenic 30.0%
TTGGGAATTGGTCAAATTAA+AGG + chr6_4:5991082-5991101 None:intergenic 30.0%
AATTTGACCAATTCCCAATT+TGG - chr6_4:5991084-5991103 Msa0973520:intron 30.0%
TAGTTTCGTCCAATTAACTT+TGG - chr6_4:5991137-5991156 Msa0973520:intron 30.0%
AGTTTCGTCCAATTAACTTT+GGG - chr6_4:5991138-5991157 Msa0973520:intron 30.0%
! TTTTCTTAGCCAACTTTGAT+GGG - chr6_4:5991192-5991211 Msa0973520:intron 30.0%
AAGAATTCATTGTGGTAGTA+TGG + chr6_4:5991223-5991242 None:intergenic 30.0%
ACATGCAAAAGAATTCATTG+TGG + chr6_4:5991231-5991250 None:intergenic 30.0%
ATTTATGGTAGTTACAACCT+AGG - chr6_4:5991527-5991546 Msa0973520:intron 30.0%
GGGTATTTATAGGTAGAAAT+GGG + chr6_4:5991555-5991574 None:intergenic 30.0%
TAGTATGGTGTAAGGAATTA+GGG + chr6_4:5991588-5991607 None:intergenic 30.0%
! AAAAGTGATCAATTTTCGTC+GGG - chr6_4:5991684-5991703 Msa0973520:intron 30.0%
ACAGATTTAAATTTAGCCCA+AGG - chr6_4:5991828-5991847 Msa0973520:intron 30.0%
CAGATTTAAATTTAGCCCAA+GGG - chr6_4:5991829-5991848 Msa0973520:intron 30.0%
AAAATACATCATCAACCCTT+GGG + chr6_4:5991847-5991866 None:intergenic 30.0%
AAAAAGTGAACAATCTTCGT+GGG + chr6_4:5991897-5991916 None:intergenic 30.0%
TAAAAAGTGAACAATCTTCG+TGG + chr6_4:5991898-5991917 None:intergenic 30.0%
!! ATCTACTTATTTTCTCCTTG+GGG + chr6_4:5991921-5991940 None:intergenic 30.0%
!! GTGATTTATTGTAGCTTTAG+AGG - chr6_4:5992454-5992473 Msa0973520:intron 30.0%
!! TTATTGTAGCTTTAGAGGTT+AGG - chr6_4:5992459-5992478 Msa0973520:intron 30.0%
!! GCGTTTTTGGAAAATTTACA+GGG + chr6_4:5992535-5992554 None:intergenic 30.0%
!! AGCGTTTTTGGAAAATTTAC+AGG + chr6_4:5992536-5992555 None:intergenic 30.0%
AGTTTGACATATATCAACCT+TGG - chr6_4:5992693-5992712 Msa0973520:intron 30.0%
ATATATTCACTAGTGATCCA+AGG + chr6_4:5992713-5992732 None:intergenic 30.0%
TAAGAATTCATAGACATGCA+TGG + chr6_4:5993020-5993039 None:intergenic 30.0%
ACATATGAAAAAATTGGTGC+TGG - chr6_4:5993112-5993131 Msa0973520:intron 30.0%
!! CATGAAAAAAAGGGTGTTTA+GGG - chr6_4:5993172-5993191 Msa0973520:intron 30.0%
!! ATGAAAAAAAGGGTGTTTAG+GGG - chr6_4:5993173-5993192 Msa0973520:intron 30.0%
!!! ACCCTATTTTTTGAGATTTC+CGG - chr6_4:5993234-5993253 Msa0973520:intron 30.0%
TCCGGAAATCTCAAAAAATA+GGG + chr6_4:5993238-5993257 None:intergenic 30.0%
ATCCGGAAATCTCAAAAAAT+AGG + chr6_4:5993239-5993258 None:intergenic 30.0%
! TGGTGTTTTCCTTTGTTAAA+GGG + chr6_4:5993298-5993317 None:intergenic 30.0%
! ATGGTGTTTTCCTTTGTTAA+AGG + chr6_4:5993299-5993318 None:intergenic 30.0%
CAAAAATGCCTTTGAATTTC+CGG + chr6_4:5993337-5993356 None:intergenic 30.0%
! CAAATTTGGTGACTTAATCT+TGG - chr6_4:5993525-5993544 Msa0973520:intron 30.0%
! CCTTTTAACCTTTTAGTACT+GGG + chr6_4:5993692-5993711 None:intergenic 30.0%
! TCCTTTTAACCTTTTAGTAC+TGG + chr6_4:5993693-5993712 None:intergenic 30.0%
AAAGGTTAAAAGGACATATG+GGG - chr6_4:5993699-5993718 Msa0973520:intron 30.0%
AATCAAACAAGTCCAAAATG+AGG - chr6_4:5993871-5993890 Msa0973520:intron 30.0%
TGTGACAAAAAGAAGAAGTA+GGG + chr6_4:5993898-5993917 None:intergenic 30.0%
ATGTGACAAAAAGAAGAAGT+AGG + chr6_4:5993899-5993918 None:intergenic 30.0%
TCTATTATTTGTATGATGCC+GGG + chr6_4:5994067-5994086 None:intergenic 30.0%
AAATACTAATAAAGGAGAGG+AGG - chr6_4:5994212-5994231 Msa0973520:intron 30.0%
AGTTTAAGTGTATTGGATCT+TGG - chr6_4:5994265-5994284 Msa0973520:intron 30.0%
TGTACTTAAGATTAAGAGAG+CGG - chr6_4:5994299-5994318 Msa0973520:intron 30.0%
!!! GTGATTTTAGCTTGGAATAT+TGG - chr6_4:5994345-5994364 Msa0973520:intron 30.0%
ATAGATCACTGACATAGTTA+TGG - chr6_4:5994520-5994539 Msa0973520:intron 30.0%
! TGTTGGGGATCTATTATTTT+TGG + chr6_4:5994615-5994634 None:intergenic 30.0%
ATTATGTTGGGATTTATGCA+CGG + chr6_4:5994797-5994816 None:intergenic 30.0%
!! TTAGCTCTGATGTTTATCTA+TGG + chr6_4:5995005-5995024 Msa0973530:CDS 30.0%
!! GGAATGCTTTTTATGGAAAT+TGG + chr6_4:5995031-5995050 Msa0973530:CDS 30.0%
!! ATTTCCATAAAAAGCATTCC+AGG - chr6_4:5995031-5995050 Msa0973520:intron 30.0%
! AACTGCTGTTTAATTAATGG+TGG - chr6_4:5995286-5995305 Msa0973520:intron 30.0%
! ACTGCTGTTTAATTAATGGT+GGG - chr6_4:5995287-5995306 Msa0973520:intron 30.0%
AAGGCTTAATAGTGTAAACT+TGG + chr6_4:5995396-5995415 Msa0973530:CDS 30.0%
ACGGAGTTATAACTATTGTA+AGG + chr6_4:5995415-5995434 Msa0973530:CDS 30.0%
AAAGATTCAGAAGTTCTTGA+CGG + chr6_4:5995434-5995453 Msa0973530:CDS 30.0%
! TTTCCATAGCAAAATGGTTT+TGG + chr6_4:5995538-5995557 None:intergenic 30.0%
!! AAACCATTTTGCTATGGAAA+TGG - chr6_4:5995538-5995557 Msa0973520:intron 30.0%
AAACCATTTCCATAGCAAAA+TGG + chr6_4:5995544-5995563 None:intergenic 30.0%
!! TACTCAAAACCATTTTGATG+TGG - chr6_4:5995574-5995593 Msa0973520:intron 30.0%
!! AAACCATTTTGATGTGGAAA+TGG - chr6_4:5995580-5995599 Msa0973520:intron 30.0%
AAACCATTTCCACATCAAAA+TGG + chr6_4:5995586-5995605 None:intergenic 30.0%
! TTTCCACAACAAAATGGTTT+TGG + chr6_4:5995623-5995642 None:intergenic 30.0%
!! AAACCATTTTGTTGTGGAAA+TGG - chr6_4:5995623-5995642 Msa0973520:intron 30.0%
AAACCATTTCCACAACAAAA+TGG + chr6_4:5995629-5995648 None:intergenic 30.0%
! GATGATGAGATTGAAGATTT+TGG + chr6_4:5995652-5995671 None:intergenic 30.0%
TTTATGTACAGTTCTCTTTG+CGG + chr6_4:5996040-5996059 None:intergenic 30.0%
TTTCATGTAGATTACAGATC+TGG + chr6_4:5996136-5996155 None:intergenic 30.0%
GCAAATGAAGTTTAATTGTG+GGG - chr6_4:5996309-5996328 Msa0973520:intron 30.0%
CAAGTGTCCAATAAATCTAA+TGG - chr6_4:5996359-5996378 Msa0973520:intron 30.0%
! GACGTGTGAAATTTAGAATT+TGG + chr6_4:5996575-5996594 None:intergenic 30.0%
!! GAGTTGGTAAATTCATTCAT+GGG + chr6_4:5996654-5996673 None:intergenic 30.0%
!! AGAGTTGGTAAATTCATTCA+TGG + chr6_4:5996655-5996674 None:intergenic 30.0%
! AAAAGGGTGTGGTATTTATA+AGG + chr6_4:5996785-5996804 None:intergenic 30.0%
AAAGTATGAAGATGGGAATT+GGG - chr6_4:5996879-5996898 Msa0973520:intron 30.0%
TGGGAAAAATTTGTCAAACA+TGG + chr6_4:5986110-5986129 None:intergenic 30.0%
AATATCTACGAAGATTAGGT+GGG + chr6_4:5996976-5996995 None:intergenic 30.0%
AAATATCTACGAAGATTAGG+TGG + chr6_4:5996977-5996996 None:intergenic 30.0%
TGAAACTTTATGTGGATGTA+TGG + chr6_4:5997037-5997056 None:intergenic 30.0%
AGTTTGCACTAAGATATGTT+TGG + chr6_4:5986261-5986280 None:intergenic 30.0%
GAAATCATAGATGAGTTCAA+TGG - chr6_4:5986364-5986383 Msa0973520:CDS 30.0%
!! AAATGATTGTGATTTTGAGG+TGG + chr6_4:5986419-5986438 None:intergenic 30.0%
!! ATGCTTTTTATGGAAGGTTA+GGG + chr6_4:5997326-5997345 None:intergenic 30.0%
AAGCTATTATGAGCAAGAAT+AGG - chr6_4:5986548-5986567 Msa0973520:CDS 30.0%
CAAATAACCCTAGTAGTAAT+TGG - chr6_4:5997434-5997453 Msa0973520:CDS 30.0%
GATCTTCTTAAGTTCAAGAA+AGG - chr6_4:5986712-5986731 Msa0973520:CDS 30.0%
AAACGTGGTTATCTACTTTA+TGG - chr6_4:5986769-5986788 Msa0973520:CDS 30.0%
TCTTGAGTTAACAACTGTTA+AGG - chr6_4:5986861-5986880 Msa0973520:CDS 30.0%
! TTGTAGCTATCAAGCTTTTA+AGG - chr6_4:5998071-5998090 Msa0973520:CDS 30.0%
! CCCAACAACTTTTCAATAAT+TGG + chr6_4:5987297-5987316 None:intergenic 30.0%
! AAATCTTCAGTGATTGACTT+TGG + chr6_4:5987363-5987382 None:intergenic 30.0%
GGAAAAAAAGAAAAAGGATG+AGG - chr6_4:5998266-5998285 Msa0973520:intron 30.0%
AAAAAAGAAAAAGGATGAGG+AGG - chr6_4:5998269-5998288 Msa0973520:intron 30.0%
AAAGAAAAAGATAGAGGATG+AGG - chr6_4:5998296-5998315 Msa0973520:intron 30.0%
!! TAAGGTTGATGAAAAGTTAG+AGG - chr6_4:5998380-5998399 Msa0973520:CDS 30.0%
TGATGAAAAGTTAGAGGAAA+AGG - chr6_4:5998386-5998405 Msa0973520:CDS 30.0%
AATATGCACGAAGATAAGGT+GGG + chr6_4:5986129-5986148 None:intergenic 35.0%
AAATATGCACGAAGATAAGG+TGG + chr6_4:5986130-5986149 None:intergenic 35.0%
AGTTCAATGGAGTCAAAGTT+TGG - chr6_4:5986377-5986396 Msa0973520:CDS 35.0%
!! GATGCTTTTTGTGGAAAGTT+AGG + chr6_4:5986480-5986499 None:intergenic 35.0%
CAACACATGTTGAATGTAAG+AGG + chr6_4:5986518-5986537 None:intergenic 35.0%
CTCTTACATTCAACATGTGT+TGG - chr6_4:5986516-5986535 Msa0973520:CDS 35.0%
ATTCAACATGTGTTGGATGA+AGG - chr6_4:5986523-5986542 Msa0973520:CDS 35.0%
TTCAACATGTGTTGGATGAA+GGG - chr6_4:5986524-5986543 Msa0973520:CDS 35.0%
ACATCCACCAATTACTACTA+GGG + chr6_4:5986597-5986616 None:intergenic 35.0%
TACATCCACCAATTACTACT+AGG + chr6_4:5986598-5986617 None:intergenic 35.0%
! GGATGTATAAAAGCACAAAG+TGG - chr6_4:5986611-5986630 Msa0973520:CDS 35.0%
ATGCTAAAGTTGGAAAAGCT+TGG - chr6_4:5986746-5986765 Msa0973520:CDS 35.0%
GAAAGTAAGGTAACTCTTTC+TGG - chr6_4:5987063-5987082 Msa0973520:CDS 35.0%
AACTTGATCCTGCTCTTATA+AGG - chr6_4:5987166-5987185 Msa0973520:CDS 35.0%
TTGTAGCTATCAAGCTTTCA+AGG - chr6_4:5987224-5987243 Msa0973520:CDS 35.0%
GATTGCAAAGAAAAAGGATG+AGG - chr6_4:5987419-5987438 Msa0973520:CDS 35.0%
! ATTGACTCAAGAGGAAGAAA+AGG - chr6_4:5987512-5987531 Msa0973520:CDS 35.0%
TCAAGAGGAAGAAAAGGTTA+AGG - chr6_4:5987518-5987537 Msa0973520:CDS 35.0%
! GTTTTCATCGTGCAATTTAG+TGG - chr6_4:5987734-5987753 Msa0973520:intron 35.0%
AAAAAGACCGTTGAATTACG+GGG - chr6_4:5987928-5987947 Msa0973520:intron 35.0%
ATTATCTTCTCCCTCTTTCT+TGG - chr6_4:5988202-5988221 Msa0973520:intron 35.0%
!!! TAATTTTTTTGGGGTAGCCA+TGG + chr6_4:5988287-5988306 None:intergenic 35.0%
! GCCTAAACAATGAGTGTTTT+TGG + chr6_4:5988798-5988817 None:intergenic 35.0%
TGAGATTGTGATGTTGGATT+TGG + chr6_4:5989013-5989032 None:intergenic 35.0%
! TGATGATGAGATTGTGATGT+TGG + chr6_4:5989019-5989038 None:intergenic 35.0%
!! TTTGGGGATTTTAGGGATTT+TGG + chr6_4:5989134-5989153 None:intergenic 35.0%
!! TAGGGATTTTGGGGATTTTA+GGG + chr6_4:5989141-5989160 None:intergenic 35.0%
!! ATAGGGATTTTGGGGATTTT+AGG + chr6_4:5989142-5989161 None:intergenic 35.0%
!!! ACATGTTTTGGAACAAGGAA+AGG + chr6_4:5989180-5989199 None:intergenic 35.0%
TTCCTTGTTCCAAAACATGT+TGG - chr6_4:5989180-5989199 Msa0973520:intron 35.0%
!!! ATCCAACATGTTTTGGAACA+AGG + chr6_4:5989185-5989204 None:intergenic 35.0%
! CTCTTACATCCAACATGTTT+TGG + chr6_4:5989192-5989211 None:intergenic 35.0%
CAAAACATGTTGGATGTAAG+AGG - chr6_4:5989190-5989209 Msa0973520:intron 35.0%
! TGAGATCACGATGTCTTTTA+TGG - chr6_4:5989219-5989238 Msa0973520:intron 35.0%
! ATCACGATGTCTTTTATGGA+AGG - chr6_4:5989223-5989242 Msa0973520:intron 35.0%
! GATGTCTTTTATGGAAGGTT+AGG - chr6_4:5989228-5989247 Msa0973520:intron 35.0%
! AGTTCAATGGTGTCAAAGTT+TGG + chr6_4:5989331-5989350 None:intergenic 35.0%
! AAATCCACTTGTTCTAAGCA+TGG + chr6_4:5989378-5989397 None:intergenic 35.0%
!! TGCTTAGAACAAGTGGATTT+TGG - chr6_4:5989378-5989397 Msa0973520:intron 35.0%
!!! TCTAGCTCTTTTTGAAGAGT+TGG - chr6_4:5989430-5989449 Msa0973520:intron 35.0%
AGTTGGCACTAAGATATGTT+TGG - chr6_4:5989447-5989466 Msa0973520:intron 35.0%
ATCTCCTGATTTCTCATAGA+AGG - chr6_4:5989502-5989521 Msa0973520:intron 35.0%
TTAACAAATCTACGAAGTGC+TGG - chr6_4:5989575-5989594 Msa0973520:intron 35.0%
TGGGAAGAATTTCTCATACA+TGG - chr6_4:5989598-5989617 Msa0973520:intron 35.0%
AGTGAAATATGGTCAAACCT+AGG + chr6_4:5989656-5989675 None:intergenic 35.0%
! GTATAAACTCAAAAGGTGTG+TGG - chr6_4:5989750-5989769 Msa0973520:intron 35.0%
AGTGTTCTTCTTTCACAACT+TGG - chr6_4:5989811-5989830 Msa0973520:intron 35.0%
CAACTTGGAAAATACCATGT+AGG - chr6_4:5989826-5989845 Msa0973520:intron 35.0%
GAAAACAAAGAGAACCTACA+TGG + chr6_4:5989843-5989862 None:intergenic 35.0%
! TTGTTTTCCTGTGAGTTTCT+TGG - chr6_4:5989855-5989874 Msa0973520:intron 35.0%
! TGTTTTCCTGTGAGTTTCTT+GGG - chr6_4:5989856-5989875 Msa0973520:intron 35.0%
! GTGTCCATTTTCCTTTACTT+TGG + chr6_4:5990435-5990454 None:intergenic 35.0%
GACCATTAGATTAAGTTTGG+AGG + chr6_4:5990996-5991015 None:intergenic 35.0%
GGATATATGCTTCTCAACAA+AGG + chr6_4:5991112-5991131 None:intergenic 35.0%
TAATTGGACGAAACTAGACT+AGG + chr6_4:5991133-5991152 None:intergenic 35.0%
CAACGAAACCCAAAGTTAAT+TGG + chr6_4:5991149-5991168 None:intergenic 35.0%
! GTTTTCTTAGCCAACTTTGA+TGG - chr6_4:5991191-5991210 Msa0973520:intron 35.0%
! AACTAACGCAAGGGTATATT+TGG + chr6_4:5991308-5991327 None:intergenic 35.0%
! GAACACATTTTTATGGACAG+TGG - chr6_4:5991444-5991463 Msa0973520:intron 35.0%
! GTTAAAAACGTGTGGATTGA+AGG + chr6_4:5991482-5991501 None:intergenic 35.0%
GGTTGTAACTACCATAAATG+TGG + chr6_4:5991526-5991545 None:intergenic 35.0%
! GGGGTATTTATAGGTAGAAA+TGG + chr6_4:5991556-5991575 None:intergenic 35.0%
!! AAGTATGGAGGGGTATTTAT+AGG + chr6_4:5991565-5991584 None:intergenic 35.0%
TGTAAGGAATTAGGGAAGTA+TGG + chr6_4:5991580-5991599 None:intergenic 35.0%
GTAGTATGGTGTAAGGAATT+AGG + chr6_4:5991589-5991608 None:intergenic 35.0%
! AAAGTGATCAATTTTCGTCG+GGG - chr6_4:5991685-5991704 Msa0973520:intron 35.0%
GTTTCTGCGGTTAAAAAAAC+AGG + chr6_4:5991766-5991785 None:intergenic 35.0%
! CAAGAAGTTCTTTTTACCCA+CGG + chr6_4:5991795-5991814 None:intergenic 35.0%
TGGGTAAAAAGAACTTCTTG+TGG - chr6_4:5991795-5991814 Msa0973520:intron 35.0%
GAAAATACATCATCAACCCT+TGG + chr6_4:5991848-5991867 None:intergenic 35.0%
! ATGATGTATTTTCCCCAAGA+AGG - chr6_4:5991855-5991874 Msa0973520:intron 35.0%
AAAAGTGAACAATCTTCGTG+GGG + chr6_4:5991896-5991915 None:intergenic 35.0%
!!! ATTGTTCACTTTTTACCCCA+AGG - chr6_4:5991903-5991922 Msa0973520:intron 35.0%
! AAAAACGCTTTTGTGCATTC+CGG - chr6_4:5992547-5992566 Msa0973520:intron 35.0%
AAAACACATGATTGCAGCAA+TGG + chr6_4:5992758-5992777 None:intergenic 35.0%
! TTGCTGCAATCATGTGTTTT+AGG - chr6_4:5992758-5992777 Msa0973520:intron 35.0%
TTCCTGCAAAAACGAGAATT+CGG - chr6_4:5992825-5992844 Msa0973520:intron 35.0%
TGCATATGTGTTTGTGAGAT+TGG - chr6_4:5992882-5992901 Msa0973520:intron 35.0%
TGTGAGATTGGTGAATGAAT+TGG - chr6_4:5992894-5992913 Msa0973520:intron 35.0%
AGAGACACATTACACAATGT+AGG - chr6_4:5992971-5992990 Msa0973520:intron 35.0%
GTTAAGAATGTCATGAACTC+AGG + chr6_4:5992998-5993017 None:intergenic 35.0%
CATCAGCACCATGAAAAAAA+GGG - chr6_4:5993163-5993182 Msa0973520:intron 35.0%
!!! CCTAAACACCCTTTTTTTCA+TGG + chr6_4:5993174-5993193 None:intergenic 35.0%
!! CCATGAAAAAAAGGGTGTTT+AGG - chr6_4:5993171-5993190 Msa0973520:intron 35.0%
!! TGAAAAAAAGGGTGTTTAGG+GGG - chr6_4:5993174-5993193 Msa0973520:intron 35.0%
!!! GGTGCGTTACATGATTTTTT+CGG + chr6_4:5993217-5993236 None:intergenic 35.0%
AACAAAGGAAAACACCATTC+CGG - chr6_4:5993301-5993320 Msa0973520:intron 35.0%
CCATTCCGGATTATAAAATC+CGG - chr6_4:5993315-5993334 Msa0973520:intron 35.0%
!!! CGGAAATTCAAAGGCATTTT+TGG - chr6_4:5993335-5993354 Msa0973520:intron 35.0%
! GGTTTGTTTCACACTATGTT+GGG - chr6_4:5993432-5993451 Msa0973520:intron 35.0%
ATTCAACACACCATGAACTA+GGG + chr6_4:5993497-5993516 None:intergenic 35.0%
AATTCAACACACCATGAACT+AGG + chr6_4:5993498-5993517 None:intergenic 35.0%
ATGTGAACTTTCCTTAACGA+TGG - chr6_4:5993660-5993679 Msa0973520:intron 35.0%
!! TTAACCTTTTAGTACTGGGA+TGG + chr6_4:5993688-5993707 None:intergenic 35.0%
CCCAGTACTAAAAGGTTAAA+AGG - chr6_4:5993689-5993708 Msa0973520:intron 35.0%
TATTATTTGTATGATGCCGG+GGG + chr6_4:5994065-5994084 None:intergenic 35.0%
CTATTATTTGTATGATGCCG+GGG + chr6_4:5994066-5994085 None:intergenic 35.0%
CTTAATCTTAAGTACAGCCA+CGG + chr6_4:5994295-5994314 None:intergenic 35.0%
!!! TTGGTTGAGTGATTTTAGCT+TGG - chr6_4:5994337-5994356 Msa0973520:intron 35.0%
CTGACCATTGTCTATTTACA+GGG + chr6_4:5994448-5994467 None:intergenic 35.0%
TCTGACCATTGTCTATTTAC+AGG + chr6_4:5994449-5994468 None:intergenic 35.0%
TGGTAGTCAGATTTAAACCT+CGG + chr6_4:5994592-5994611 None:intergenic 35.0%
!!! TGGGGATCTATTATTTTTGG+TGG + chr6_4:5994612-5994631 None:intergenic 35.0%
TCAACATGAAGACTATGTTG+GGG + chr6_4:5994630-5994649 None:intergenic 35.0%
GTCAACATGAAGACTATGTT+GGG + chr6_4:5994631-5994650 None:intergenic 35.0%
! AACCTTCCCTTTTGTCATAT+TGG - chr6_4:5994698-5994717 Msa0973520:intron 35.0%
AACCAATATGACAAAAGGGA+AGG + chr6_4:5994703-5994722 None:intergenic 35.0%
CAAAGAGAAAACCTTACTAG+TGG - chr6_4:5994740-5994759 Msa0973520:intron 35.0%
GTGTAGGAAGCAATTATGTT+GGG + chr6_4:5994809-5994828 None:intergenic 35.0%
GAGAAAGAAACACTGATATG+TGG + chr6_4:5994959-5994978 Msa0973530:CDS 35.0%
! CTTACTGGTTATGAAGAACA+AGG + chr6_4:5995064-5995083 Msa0973530:CDS 35.0%
CTTGTTCTTCATAACCAGTA+AGG - chr6_4:5995062-5995081 Msa0973520:intron 35.0%
TAATTAATGGTGTGCCTTAC+TGG + chr6_4:5995079-5995098 Msa0973530:CDS 35.0%
AGTAAGGCACACCATTAATT+AGG - chr6_4:5995078-5995097 Msa0973520:intron 35.0%
AAAATGGCTCGCCTAATTAA+TGG + chr6_4:5995092-5995111 Msa0973530:CDS 35.0%
! ATTAATTAGGCGAGCCATTT+TGG - chr6_4:5995091-5995110 Msa0973520:intron 35.0%
! TGATTGCAAGGTTGATTGAA+AGG - chr6_4:5995185-5995204 Msa0973520:intron 35.0%
! CTGCTGTTTAATTAATGGTG+GGG - chr6_4:5995288-5995307 Msa0973520:intron 35.0%
!!! CAAAATGGTTTTGGCATTCA+GGG + chr6_4:5995529-5995548 None:intergenic 35.0%
! ATGCCAAAACCATTTTGCTA+TGG - chr6_4:5995532-5995551 Msa0973520:intron 35.0%
! ACTCCAAAACCATTTTGTTG+TGG - chr6_4:5995617-5995636 Msa0973520:intron 35.0%
! TTTCCACAGCAAAATGGTTT+TGG + chr6_4:5995704-5995723 None:intergenic 35.0%
!! AAACCATTTTGCTGTGGAAA+TGG - chr6_4:5995704-5995723 Msa0973520:intron 35.0%
AAACCATTTCCACAGCAAAA+TGG + chr6_4:5995710-5995729 None:intergenic 35.0%
! TTTCCACAGCAAAATGGTTT+TGG + chr6_4:5995704-5995723 None:intergenic 35.0%
!! AAACCATTTTGCTGTGGAAA+TGG - chr6_4:5995704-5995723 Msa0973520:intron 35.0%
AAACCATTTCCACAGCAAAA+TGG + chr6_4:5995710-5995729 None:intergenic 35.0%
!!! GTTGTGTTGTTTGATTTTGG+TGG + chr6_4:5995796-5995815 None:intergenic 35.0%
!!! GGTGTTGTGTTGTTTGATTT+TGG + chr6_4:5995799-5995818 None:intergenic 35.0%
TTGAATTTGAGTGATTCTGG+AGG + chr6_4:5995827-5995846 None:intergenic 35.0%
AGCTTGAACGAATTCGATTT+CGG + chr6_4:5995897-5995916 None:intergenic 35.0%
AGATCCGTAGAAGAACATAT+CGG - chr6_4:5995978-5995997 Msa0973520:intron 35.0%
CATTCCGATATGTTCTTCTA+CGG + chr6_4:5995985-5996004 None:intergenic 35.0%
TCAGAGCAAAACTGTGAAAA+AGG - chr6_4:5996013-5996032 Msa0973520:intron 35.0%
AGAACTGTACATAAACCTCA+AGG - chr6_4:5996045-5996064 Msa0973520:intron 35.0%
!!! TCAGAGTTGTTTTGAAACTC+CGG - chr6_4:5996187-5996206 Msa0973520:intron 35.0%
TTGCTTATGCACAATGCATA+AGG + chr6_4:5996394-5996413 None:intergenic 35.0%
ATGCATTGTGCATAAGCAAA+TGG - chr6_4:5996395-5996414 Msa0973520:intron 35.0%
! CATGGGTGTGTTGAATATTT+TGG + chr6_4:5996637-5996656 None:intergenic 35.0%
CTAATTGGTACTTTCCATGT+GGG - chr6_4:5996728-5996747 Msa0973520:intron 35.0%
TTGTATGAACTAAAAGGGTG+TGG + chr6_4:5996796-5996815 None:intergenic 35.0%
CAAAGTATGAAGATGGGAAT+TGG - chr6_4:5996878-5996897 Msa0973520:intron 35.0%
AAGTATGAAGATGGGAATTG+GGG - chr6_4:5996880-5996899 Msa0973520:intron 35.0%
! TGCTAAGAACAAGTGGTTTT+TGG + chr6_4:5997177-5997196 None:intergenic 35.0%
AAAACCACTTGTTCTTAGCA+TGG - chr6_4:5997177-5997196 Msa0973520:CDS 35.0%
AGTTCAATGGAGTCAAAGTT+TGG - chr6_4:5986377-5986396 Msa0973520:CDS 35.0%
!! GATGCTTTTTATGGAAGGTT+AGG + chr6_4:5997327-5997346 None:intergenic 35.0%
!! TTCACGATGCTTTTTATGGA+AGG + chr6_4:5997332-5997351 None:intergenic 35.0%
!! TGAGTTCACGATGCTTTTTA+TGG + chr6_4:5997336-5997355 None:intergenic 35.0%
CAACACATGTTGAATGTAAG+AGG + chr6_4:5986518-5986537 None:intergenic 35.0%
CTCTTACATTCAACATGTGT+TGG - chr6_4:5986516-5986535 Msa0973520:CDS 35.0%
ATTCAACATGTGTTGGATGA+AGG - chr6_4:5986523-5986542 Msa0973520:CDS 35.0%
ATAACCCTAGTAGTAATTGG+TGG - chr6_4:5997437-5997456 Msa0973520:CDS 35.0%
TAACCCTAGTAGTAATTGGT+GGG - chr6_4:5997438-5997457 Msa0973520:CDS 35.0%
AAGATTTGGAAACCTAGCTA+TGG - chr6_4:5997507-5997526 Msa0973520:CDS 35.0%
ATGCTAAAGTTGGAAAAGCT+TGG - chr6_4:5986746-5986765 Msa0973520:CDS 35.0%
! ATTGTAGATTTTCCAGTTCC+TGG + chr6_4:5997646-5997665 None:intergenic 35.0%
!!! TTTTTTCTTCTTCCTTTGCC+CGG + chr6_4:5997821-5997840 None:intergenic 35.0%
TGATGAGACTGATGAAAAGA+AGG - chr6_4:5997852-5997871 Msa0973520:intron 35.0%
GAAAGTAAGGTAACTCTTTC+TGG - chr6_4:5987063-5987082 Msa0973520:CDS 35.0%
GACTTTGATTCAATCTCTTG+AGG - chr6_4:5998245-5998264 Msa0973520:CDS 35.0%
GGAAGCAAAGAAAAAGATAG+AGG - chr6_4:5998290-5998309 Msa0973520:intron 35.0%
ACAAGAATTGATCACTCAAG+AGG - chr6_4:5998347-5998366 Msa0973520:intron 35.0%
TCAAGAGGAAGAAAAGGTTA+AGG - chr6_4:5987518-5987537 Msa0973520:CDS 35.0%
AAAGTTAGAGGAAAAGGTGA+AGG - chr6_4:5998392-5998411 Msa0973520:CDS 35.0%
GTCACAACTAGGTTCAATCA+CGG - chr6_4:5986063-5986082 Msa0973520:CDS 40.0%
ATCCATGCTTAGAACAAGTG+GGG + chr6_4:5989373-5989392 None:intergenic 40.0%
CATCCATGCTTAGAACAAGT+GGG + chr6_4:5989372-5989391 None:intergenic 40.0%
TCATCCATGCTTAGAACAAG+TGG + chr6_4:5989371-5989390 None:intergenic 40.0%
TCAATGGAGTCAAAGTTTGG+TGG - chr6_4:5986380-5986399 Msa0973520:CDS 40.0%
!! TGAGTTCACGATGCTTTTTG+TGG + chr6_4:5986489-5986508 None:intergenic 40.0%
CCAATTACTACTAGGGTTGT+TGG + chr6_4:5986590-5986609 None:intergenic 40.0%
CCAACAACCCTAGTAGTAAT+TGG - chr6_4:5986587-5986606 Msa0973520:CDS 40.0%
ACAACCCTAGTAGTAATTGG+TGG - chr6_4:5986590-5986609 Msa0973520:CDS 40.0%
TTTGAGCATCCTGCAAGATT+TGG - chr6_4:5986646-5986665 Msa0973520:CDS 40.0%
! AAGATTTGGAACCCTAGCTA+TGG - chr6_4:5986660-5986679 Msa0973520:CDS 40.0%
!!! CTTTTCTGGTTCCATAGCTA+GGG + chr6_4:5986674-5986693 None:intergenic 40.0%
!!! TCTTTTCTGGTTCCATAGCT+AGG + chr6_4:5986675-5986694 None:intergenic 40.0%
TATCTACTTTATGGTCCACC+AGG - chr6_4:5986778-5986797 Msa0973520:CDS 40.0%
TTCTTTCTTCTTCCTTTGCC+CGG + chr6_4:5986974-5986993 None:intergenic 40.0%
TTGATCCTGCTCTTATAAGG+AGG - chr6_4:5987169-5987188 Msa0973520:CDS 40.0%
TGATCCTGCTCTTATAAGGA+GGG - chr6_4:5987170-5987189 Msa0973520:CDS 40.0%
TCTTATAAGGAGGGGAAGAA+TGG - chr6_4:5987179-5987198 Msa0973520:CDS 40.0%
AAATTCTCAGCAACATCAGC+AGG + chr6_4:5987336-5987355 None:intergenic 40.0%
TGCAAAGAAAAAGGATGAGG+AGG - chr6_4:5987422-5987441 Msa0973520:CDS 40.0%
AAGGAAAAAGGTAGAGGATG+AGG - chr6_4:5987449-5987468 Msa0973520:CDS 40.0%
GAGGAAAAAGTGAAGGAGAA+TGG - chr6_4:5987555-5987574 Msa0973520:CDS 40.0%
! GAGAATGGTGTCAAAGACAA+TGG - chr6_4:5987570-5987589 Msa0973520:CDS 40.0%
AAAAGACCGTTGAATTACGG+GGG - chr6_4:5987929-5987948 Msa0973520:intron 40.0%
TATAGACCCCCGTAATTCAA+CGG + chr6_4:5987938-5987957 None:intergenic 40.0%
CCTGGAAATGAGTGACAAAA+CGG + chr6_4:5988236-5988255 None:intergenic 40.0%
! CGTTTTGTCACTCATTTCCA+GGG - chr6_4:5988234-5988253 Msa0973520:intron 40.0%
! GTTTTGTCACTCATTTCCAG+GGG - chr6_4:5988235-5988254 Msa0973520:intron 40.0%
TGAAGCTGTGAAAAGATCAG+CGG + chr6_4:5988978-5988997 None:intergenic 40.0%
! TCAATGGTGTCAAAGTTTGG+TGG + chr6_4:5989328-5989347 None:intergenic 40.0%
GAGATCACAGATGAGTTCAA+TGG + chr6_4:5989344-5989363 None:intergenic 40.0%
TGAACTCATCTGTGATCTCT+TGG - chr6_4:5989345-5989364 Msa0973520:intron 40.0%
TCATCCATGCTTAGAACAAG+TGG - chr6_4:5989371-5989390 Msa0973520:intron 40.0%
GGCACTAAGATATGTTTGGA+TGG - chr6_4:5989451-5989470 Msa0973520:intron 40.0%
GTCAAACCTAGGCTCAATAA+TGG + chr6_4:5989645-5989664 None:intergenic 40.0%
! GTTTTCCTGTGAGTTTCTTG+GGG - chr6_4:5989857-5989876 Msa0973520:intron 40.0%
! TTTTCCTGTGAGTTTCTTGG+GGG - chr6_4:5989858-5989877 Msa0973520:intron 40.0%
AAGAATGGTGCAAAGGATGA+AGG + chr6_4:5990188-5990207 None:intergenic 40.0%
! GTGATAGAGAGTGCGATATT+TGG - chr6_4:5990315-5990334 Msa0973520:intron 40.0%
AAAGGCTCCAAATTGGGAAT+TGG + chr6_4:5991094-5991113 None:intergenic 40.0%
CTCAACAAAGGCTCCAAATT+GGG + chr6_4:5991100-5991119 None:intergenic 40.0%
TCTCAACAAAGGCTCCAAAT+TGG + chr6_4:5991101-5991120 None:intergenic 40.0%
TTCATTGTGGTAGTATGGTG+TGG + chr6_4:5991218-5991237 None:intergenic 40.0%
GTATATTTGGAAGCAGTGCA+GGG + chr6_4:5991295-5991314 None:intergenic 40.0%
! AGGAATTAGGGAAGTATGGA+GGG + chr6_4:5991576-5991595 None:intergenic 40.0%
! AAGGAATTAGGGAAGTATGG+AGG + chr6_4:5991577-5991596 None:intergenic 40.0%
GGAGAAAGTAGTATGGTGTA+AGG + chr6_4:5991596-5991615 None:intergenic 40.0%
AAAATAGTGAGTAGCCGACT+TGG - chr6_4:5991709-5991728 Msa0973520:intron 40.0%
! AAATAGTGAGTAGCCGACTT+GGG - chr6_4:5991710-5991729 Msa0973520:intron 40.0%
AAATAGTGAGCAGCCTTCTT+GGG + chr6_4:5991871-5991890 None:intergenic 40.0%
AAAATAGTGAGCAGCCTTCT+TGG + chr6_4:5991872-5991891 None:intergenic 40.0%
!!! GGAATGCACAAAAGCGTTTT+TGG + chr6_4:5992548-5992567 None:intergenic 40.0%
! TTCATGGTGCTAATGCAATC+CGG + chr6_4:5992583-5992602 None:intergenic 40.0%
TATTTGTTTGAGCTCGTTGC+TGG + chr6_4:5992784-5992803 None:intergenic 40.0%
!! AACCGAATTCTCGTTTTTGC+AGG + chr6_4:5992830-5992849 None:intergenic 40.0%
TGGAGTGGTGATTTATAGGA+AGG - chr6_4:5992933-5992952 Msa0973520:intron 40.0%
ATAGGAAGGAAAGAAGAGTG+AGG - chr6_4:5992947-5992966 Msa0973520:intron 40.0%
TAGGAAGGAAAGAAGAGTGA+GGG - chr6_4:5992948-5992967 Msa0973520:intron 40.0%
GTTGTCTGGATTACGTAATC+CGG - chr6_4:5993136-5993155 Msa0973520:intron 40.0%
GCATCAGCACCATGAAAAAA+AGG - chr6_4:5993162-5993181 Msa0973520:intron 40.0%
! CCGGATTTTATAATCCGGAA+TGG + chr6_4:5993318-5993337 None:intergenic 40.0%
! GGGTTTGTTTCACACTATGT+TGG - chr6_4:5993431-5993450 Msa0973520:intron 40.0%
CGGATTAATTCCCTAGTTCA+TGG - chr6_4:5993484-5993503 Msa0973520:intron 40.0%
ATGGGGACAAGATTACTTGA+TGG + chr6_4:5993551-5993570 None:intergenic 40.0%
CATATTAACCATCCACCAAG+AGG - chr6_4:5993723-5993742 Msa0973520:intron 40.0%
!!! TTTATTTTGCCTGCTCCTCT+TGG + chr6_4:5993741-5993760 None:intergenic 40.0%
GCTGAACAAGACTAACGTTA+AGG + chr6_4:5993808-5993827 None:intergenic 40.0%
! AAGAAGTAGGGTCCTCATTT+TGG + chr6_4:5993886-5993905 None:intergenic 40.0%
TATTGGATCTTGGAAATCCG+TGG - chr6_4:5994275-5994294 Msa0973520:intron 40.0%
GCGGCAAAACTCATTTAAGT+TGG - chr6_4:5994318-5994337 Msa0973520:intron 40.0%
TACAGGGTCCGCATTTAATA+TGG + chr6_4:5994432-5994451 None:intergenic 40.0%
GGTCAACATGAAGACTATGT+TGG + chr6_4:5994632-5994651 None:intergenic 40.0%
AGAGAAAACCTTACTAGTGG+TGG - chr6_4:5994743-5994762 Msa0973520:intron 40.0%
GGTGTAGGAAGCAATTATGT+TGG + chr6_4:5994810-5994829 None:intergenic 40.0%
!!! TTTGGTTCTTTTTGGGGTGT+AGG + chr6_4:5994825-5994844 None:intergenic 40.0%
!! CGAACCTGGAATGCTTTTTA+TGG + chr6_4:5995038-5995057 Msa0973530:CDS 40.0%
! TTGCAAGGTTGATTGAAAGG+TGG - chr6_4:5995188-5995207 Msa0973520:intron 40.0%
GGTGGGGAATATTTCGAATT+TGG - chr6_4:5995304-5995323 Msa0973520:intron 40.0%
!!! GCAAAATGGTTTTGGCATTC+AGG + chr6_4:5995530-5995549 None:intergenic 40.0%
! TTCTGGTATAGTGATGACGA+CGG + chr6_4:5995679-5995698 None:intergenic 40.0%
!!! GCAAAATGGTTTTGGCATTC+TGG + chr6_4:5995530-5995549 None:intergenic 40.0%
! ATGCCAAAACCATTTTGCTG+TGG - chr6_4:5995698-5995717 Msa0973520:intron 40.0%
! ACTCCAAAACCATTTTGCTG+TGG - chr6_4:5995741-5995760 Msa0973520:intron 40.0%
ACCAACACACATCACAGATT+CGG - chr6_4:5995852-5995871 Msa0973520:intron 40.0%
TTGAACGAATTCGATTTCGG+TGG + chr6_4:5995894-5995913 None:intergenic 40.0%
TGCTTGTATAGTTTGGGTAG+TGG + chr6_4:5995951-5995970 None:intergenic 40.0%
ACCCAAACTATACAAGCAAC+CGG - chr6_4:5995953-5995972 Msa0973520:intron 40.0%
GAGACGAAAAAGAAACCTTG+AGG + chr6_4:5996063-5996082 None:intergenic 40.0%
CATTTCTCTCACCAAAACAC+AGG + chr6_4:5996280-5996299 None:intergenic 40.0%
!!! CTGTGTTTTGGTGAGAGAAA+TGG - chr6_4:5996278-5996297 Msa0973520:intron 40.0%
!! CCACATGGAAAGTACCAATT+AGG + chr6_4:5996730-5996749 None:intergenic 40.0%
CCTAATTGGTACTTTCCATG+TGG - chr6_4:5996727-5996746 Msa0973520:intron 40.0%
GTCACAACTAGGTTCAATCA+CGG - chr6_4:5986063-5986082 Msa0973520:CDS 40.0%
TCATCCATGCTAAGAACAAG+TGG + chr6_4:5997184-5997203 None:intergenic 40.0%
TCAATGGAGTCAAAGTTTGG+TGG - chr6_4:5986380-5986399 Msa0973520:CDS 40.0%
AACCCTAGTAGTAATTGGTG+GGG - chr6_4:5986592-5986611 Msa0973520:CDS 40.0%
TTTGAGCATCCTGCAAGATT+TGG - chr6_4:5986646-5986665 Msa0973520:CDS 40.0%
!!! TCTTTTCTGGTTCCATAGCT+AGG + chr6_4:5986675-5986694 None:intergenic 40.0%
TATCTACTTTATGGTCCTCC+AGG - chr6_4:5997625-5997644 Msa0973520:CDS 40.0%
AACTTGATCCTGCTCTCATA+AGG - chr6_4:5998013-5998032 Msa0973520:CDS 40.0%
GGTTCTTGCAAGAAACTACT+TGG - chr6_4:5987245-5987264 Msa0973520:CDS 40.0%
AAATTCTCAGCAACATCAGC+AGG + chr6_4:5987336-5987355 None:intergenic 40.0%
GATCACTCAAGAGGAAGAAA+AGG - chr6_4:5998356-5998375 Msa0973520:intron 40.0%
! GAGAATGGTGTCAAAGAGAA+TGG - chr6_4:5998414-5998433 Msa0973520:CDS 40.0%
GAGAATGGTGTGAAAGAGAA+CGG - chr6_4:5998429-5998448 Msa0973520:CDS 40.0%
AGATGGGAATTGGGGAACTA+TGG - chr6_4:5986041-5986060 Msa0973520:CDS 45.0%
! AACCCCACTTGTTCTAAGCA+TGG - chr6_4:5986330-5986349 Msa0973520:CDS 45.0%
GTTGGAAAAGCTTGGAAACG+TGG - chr6_4:5986754-5986773 Msa0973520:CDS 45.0%
ATGGTAGACTTTCCAGTTCC+TGG + chr6_4:5986799-5986818 None:intergenic 45.0%
GATTGTTCTCTCGATCTCAC+CGG - chr6_4:5986952-5986971 Msa0973520:CDS 45.0%
ATTGTTCTCTCGATCTCACC+GGG - chr6_4:5986953-5986972 Msa0973520:CDS 45.0%
GATGGAATTTGGTCAGCTTG+TGG - chr6_4:5987102-5987121 Msa0973520:CDS 45.0%
GATCCTGCTCTTATAAGGAG+GGG - chr6_4:5987171-5987190 Msa0973520:CDS 45.0%
AAAAGGATGAGGAGGAAGCA+AGG - chr6_4:5987430-5987449 Msa0973520:CDS 45.0%
TGAGGAGGAAGCAAGGAAAA+AGG - chr6_4:5987437-5987456 Msa0973520:CDS 45.0%
GGAAGCAAGGAAAAAGGTAG+AGG - chr6_4:5987443-5987462 Msa0973520:CDS 45.0%
TGTAGGCTTAACTGATCTGC+CGG - chr6_4:5987785-5987804 Msa0973520:intron 45.0%
GGAGGTTAGACCAAGAAAGA+GGG + chr6_4:5988215-5988234 None:intergenic 45.0%
GGAAATGAGTGACAAAACGG+AGG + chr6_4:5988233-5988252 None:intergenic 45.0%
! CCGTTTTGTCACTCATTTCC+AGG - chr6_4:5988233-5988252 Msa0973520:intron 45.0%
GGCTACCTCATGCTAATGAA+GGG + chr6_4:5988266-5988285 None:intergenic 45.0%
TGGCTACCTCATGCTAATGA+AGG + chr6_4:5988267-5988286 None:intergenic 45.0%
TCATTAGCATGAGGTAGCCA+TGG - chr6_4:5988267-5988286 Msa0973520:intron 45.0%
!! ACAAATCTACGAAGTGCTGG+TGG - chr6_4:5989578-5989597 Msa0973520:intron 45.0%
!! CAAATCTACGAAGTGCTGGT+GGG - chr6_4:5989579-5989598 Msa0973520:intron 45.0%
TGCTAGCCATTATTGAGCCT+AGG - chr6_4:5989636-5989655 Msa0973520:intron 45.0%
TTTCCTGTGAGTTTCTTGGG+GGG - chr6_4:5989859-5989878 Msa0973520:intron 45.0%
! TTTGAGGCATGCTTTGATGC+TGG + chr6_4:5989965-5989984 None:intergenic 45.0%
AGCATGCCTCAAAGTTCACA+TGG - chr6_4:5989972-5989991 Msa0973520:intron 45.0%
CACTGTCCATGTGAACTTTG+AGG + chr6_4:5989981-5990000 None:intergenic 45.0%
TTACTGTAGAAGGTAAGGGG+CGG + chr6_4:5990612-5990631 None:intergenic 45.0%
ATGCAGTCCTCACATTCATG+CGG - chr6_4:5990893-5990912 Msa0973520:intron 45.0%
GGTATATTTGGAAGCAGTGC+AGG + chr6_4:5991296-5991315 None:intergenic 45.0%
GCGTGACTTAACTAACGCAA+GGG + chr6_4:5991317-5991336 None:intergenic 45.0%
TGCGTGACTTAACTAACGCA+AGG + chr6_4:5991318-5991337 None:intergenic 45.0%
TGCATGACTTAAGTCACGCA+TGG + chr6_4:5991369-5991388 None:intergenic 45.0%
TGACTTAAGTCATGCACCAC+TGG - chr6_4:5991373-5991392 Msa0973520:intron 45.0%
ATAGGTAGAAATGGGAGCCT+AGG + chr6_4:5991547-5991566 None:intergenic 45.0%
! GGAATTAGGGAAGTATGGAG+GGG + chr6_4:5991575-5991594 None:intergenic 45.0%
AGGAGAGGGAGAAAGTAGTA+TGG + chr6_4:5991603-5991622 None:intergenic 45.0%
AGAAATAGAGGGAGAGAGTG+AGG + chr6_4:5991623-5991642 None:intergenic 45.0%
!! AATAGTGAGTAGCCGACTTG+GGG - chr6_4:5991711-5991730 Msa0973520:intron 45.0%
! ACCGCAGAAACTTTTTACCG+TGG - chr6_4:5991775-5991794 Msa0973520:intron 45.0%
CCCACGGTAAAAAGTTTCTG+CGG + chr6_4:5991779-5991798 None:intergenic 45.0%
! CCGCAGAAACTTTTTACCGT+GGG - chr6_4:5991776-5991795 Msa0973520:intron 45.0%
AATAGTGAGCAGCCTTCTTG+GGG + chr6_4:5991870-5991889 None:intergenic 45.0%
! AACTAGCGCATGGGCATTTT+CGG - chr6_4:5992382-5992401 Msa0973520:intron 45.0%
ACGAGAGAAGGTTATAGGGT+GGG + chr6_4:5992509-5992528 None:intergenic 45.0%
GCACACGAGAGAAGGTTATA+GGG + chr6_4:5992513-5992532 None:intergenic 45.0%
GCATTCCGGATTACGTAATC+CGG - chr6_4:5992561-5992580 Msa0973520:intron 45.0%
GCAATCCGGATTACGTAATC+CGG + chr6_4:5992569-5992588 None:intergenic 45.0%
TACTCATAACCAGCGTTGTG+TGG - chr6_4:5992802-5992821 Msa0973520:intron 45.0%
TTGGTGAAGAGAAGAACCTG+TGG - chr6_4:5992913-5992932 Msa0973520:intron 45.0%
CCTATAAATCACCACTCCAC+AGG + chr6_4:5992932-5992951 None:intergenic 45.0%
CCTGTGGAGTGGTGATTTAT+AGG - chr6_4:5992929-5992948 Msa0973520:intron 45.0%
!! AAATTGGTGCTGGTGTTGTC+TGG - chr6_4:5993122-5993141 Msa0973520:intron 45.0%
!! TTCATGGTGCTGATGCAATC+CGG + chr6_4:5993158-5993177 None:intergenic 45.0%
!!! AAGGGTGTTTAGGGGGTTTT+CGG - chr6_4:5993181-5993200 Msa0973520:intron 45.0%
GCACATGTGCAAGTGTTTCT+CGG - chr6_4:5993464-5993483 Msa0973520:intron 45.0%
GGTTCCATCCCAGTACTAAA+AGG - chr6_4:5993681-5993700 Msa0973520:intron 45.0%
! TTGTATTTGGTGAGATCCCC+CGG - chr6_4:5994046-5994065 Msa0973520:intron 45.0%
CGGACCCTGTAAATAGACAA+TGG - chr6_4:5994441-5994460 Msa0973520:intron 45.0%
CATAGTCTTCATGTTGACCG+CGG - chr6_4:5994633-5994652 Msa0973520:intron 45.0%
ATAGTCTTCATGTTGACCGC+GGG - chr6_4:5994634-5994653 Msa0973520:intron 45.0%
AAGTGTATCTTCAACTCCCG+CGG + chr6_4:5994653-5994672 None:intergenic 45.0%
AAAGGGAAGGTTCGACCAAT+TGG + chr6_4:5994690-5994709 None:intergenic 45.0%
AACCTTACTAGTGGTGGTCA+TGG - chr6_4:5994749-5994768 Msa0973520:intron 45.0%
CTATGGTTGTTGAGAACGAG+AGG + chr6_4:5994988-5995007 Msa0973530:CDS 45.0%
CATTCAGGGCAATGCTCTAA+TGG + chr6_4:5995515-5995534 None:intergenic 45.0%
! TGAGTGATTCTGGAGGACTA+TGG + chr6_4:5995820-5995839 None:intergenic 45.0%
GAATCTGTGATGTGTGTTGG+TGG + chr6_4:5995853-5995872 None:intergenic 45.0%
TCCGAATCTGTGATGTGTGT+TGG + chr6_4:5995856-5995875 None:intergenic 45.0%
! ATTCGATTTCGGTGGTGTTG+TGG + chr6_4:5995886-5995905 None:intergenic 45.0%
GCCGGTTGCTTGTATAGTTT+GGG + chr6_4:5995957-5995976 None:intergenic 45.0%
AGCCGGTTGCTTGTATAGTT+TGG + chr6_4:5995958-5995977 None:intergenic 45.0%
TGTTCTTCTACGGATCTAGC+CGG + chr6_4:5995975-5995994 None:intergenic 45.0%
!!! GTTGTTTTGAAACTCCGGCA+CGG - chr6_4:5996192-5996211 Msa0973520:intron 45.0%
TTGTGGGGTATGAGCTGAAA+AGG - chr6_4:5996324-5996343 Msa0973520:intron 45.0%
CACGTCATCACAAGTACTAG+TGG - chr6_4:5996589-5996608 Msa0973520:intron 45.0%
AGATGGGAATTGGGGAACTA+TGG - chr6_4:5986041-5986060 Msa0973520:CDS 45.0%
ACCCTAGTAGTAATTGGTGG+GGG - chr6_4:5986593-5986612 Msa0973520:CDS 45.0%
ACCCCCACCAATTACTACTA+GGG + chr6_4:5997444-5997463 None:intergenic 45.0%
TACCCCCACCAATTACTACT+AGG + chr6_4:5997445-5997464 None:intergenic 45.0%
! GGGGGTATAAAAGCACAAAG+TGG - chr6_4:5997458-5997477 Msa0973520:CDS 45.0%
GCTAGGTTTCCAAATCTTGC+AGG + chr6_4:5997505-5997524 None:intergenic 45.0%
GTTGGAAAAGCTTGGAAACG+TGG - chr6_4:5986754-5986773 Msa0973520:CDS 45.0%
! GTAGATTTTCCAGTTCCTGG+AGG + chr6_4:5997643-5997662 None:intergenic 45.0%
GATTGTTCTCTCGATCTCAC+CGG - chr6_4:5986952-5986971 Msa0973520:CDS 45.0%
ATTGTTCTCTCGATCTCACC+GGG - chr6_4:5986953-5986972 Msa0973520:CDS 45.0%
TTGATCCTGCTCTCATAAGG+AGG - chr6_4:5998016-5998035 Msa0973520:CDS 45.0%
TGATCCTGCTCTCATAAGGA+GGG - chr6_4:5998017-5998036 Msa0973520:CDS 45.0%
TCTCATAAGGAGGGGAAGAA+TGG - chr6_4:5998026-5998045 Msa0973520:CDS 45.0%
GAGGAAAAGGTGAAGGAGAA+TGG - chr6_4:5998399-5998418 Msa0973520:CDS 45.0%
!!! TTAATTTTTTTTATTTTTTC+TGG + chr6_4:5988073-5988092 None:intergenic 5.0%
!!! TCAATAATAATAATTTTTTT+GGG + chr6_4:5988297-5988316 None:intergenic 5.0%
!!! TTAATTTTTTTCTTTAAATT+TGG - chr6_4:5988924-5988943 Msa0973520:intron 5.0%
!!! TTTCTATTAATATTTTTTTT+TGG + chr6_4:5990411-5990430 None:intergenic 5.0%
!! ATAAATACAAATATAAATAA+AGG + chr6_4:5992075-5992094 None:intergenic 5.0%
!!! TATTTTTTTATTTTTTTTAG+TGG + chr6_4:5993632-5993651 None:intergenic 5.0%
!!! TTAATTTTTTTTTTTTAACT+CGG + chr6_4:5994474-5994493 None:intergenic 5.0%
GGGGAACTATGGTCACAACT+AGG - chr6_4:5986052-5986071 Msa0973520:CDS 50.0%
CAACTAGGTTCAATCACGGC+TGG - chr6_4:5986067-5986086 Msa0973520:CDS 50.0%
GCTAGGGTTCCAAATCTTGC+AGG + chr6_4:5986658-5986677 None:intergenic 50.0%
CTTTATGGTCCACCAGGAAC+TGG - chr6_4:5986784-5986803 Msa0973520:CDS 50.0%
GTAGACTTTCCAGTTCCTGG+TGG + chr6_4:5986796-5986815 None:intergenic 50.0%
CTTCCCCTCCTTATAAGAGC+AGG + chr6_4:5987177-5987196 None:intergenic 50.0%
AGGTAGAGGATGAGGAAGCT+CGG - chr6_4:5987457-5987476 Msa0973520:CDS 50.0%
CGGAGGTTAGACCAAGAAAG+AGG + chr6_4:5988216-5988235 None:intergenic 50.0%
TTGTCACTCATTTCCAGGGG+CGG - chr6_4:5988238-5988257 Msa0973520:intron 50.0%
CGGTTCCCTTCATTAGCATG+AGG - chr6_4:5988258-5988277 Msa0973520:intron 50.0%
GCATGAATGTGAGGACTGCA+TGG + chr6_4:5990894-5990913 None:intergenic 50.0%
GTTGTGACCGCATGAATGTG+AGG + chr6_4:5990903-5990922 None:intergenic 50.0%
ATGGTGTGGCCCATCAAAGT+TGG + chr6_4:5991204-5991223 None:intergenic 50.0%
GTTAACTCACGCACGTTGGT+CGG - chr6_4:5991407-5991426 Msa0973520:intron 50.0%
GTGCATGTTAACTGGCGCAA+GGG + chr6_4:5992320-5992339 None:intergenic 50.0%
GTCACGTGGTGCATGTTAAC+TGG + chr6_4:5992328-5992347 None:intergenic 50.0%
ACTGCGCAAGTTAAGTCACG+TGG + chr6_4:5992342-5992361 None:intergenic 50.0%
TGCGCAAGTTAACTAGCGCA+TGG - chr6_4:5992372-5992391 Msa0973520:intron 50.0%
GCGCAAGTTAACTAGCGCAT+GGG - chr6_4:5992373-5992392 Msa0973520:intron 50.0%
CACGAGAGAAGGTTATAGGG+TGG + chr6_4:5992510-5992529 None:intergenic 50.0%
GGCACACGAGAGAAGGTTAT+AGG + chr6_4:5992514-5992533 None:intergenic 50.0%
TTTACAGGGCACACGAGAGA+AGG + chr6_4:5992521-5992540 None:intergenic 50.0%
GAAGAGAAGAACCTGTGGAG+TGG - chr6_4:5992918-5992937 Msa0973520:intron 50.0%
!! TGCACTCTGAGATGTCTCTG+TGG + chr6_4:5993075-5993094 None:intergenic 50.0%
CGCGAGAAAAGTCATAGGGT+GGG - chr6_4:5993371-5993390 Msa0973520:intron 50.0%
CTGGGATGGAACCATCGTTA+AGG + chr6_4:5993674-5993693 None:intergenic 50.0%
! ATTTTGCCTGCTCCTCTTGG+TGG + chr6_4:5993738-5993757 None:intergenic 50.0%
CATGCGCATCGCTTTCTATG+TGG + chr6_4:5994178-5994197 None:intergenic 50.0%
CACATAGAAAGCGATGCGCA+TGG - chr6_4:5994176-5994195 Msa0973520:intron 50.0%
GAAAGCGATGCGCATGGAAA+AGG - chr6_4:5994182-5994201 Msa0973520:intron 50.0%
CACCATGACCACCACTAGTA+AGG + chr6_4:5994754-5994773 None:intergenic 50.0%
AGTGGTGGTCATGGTGCATA+AGG - chr6_4:5994758-5994777 Msa0973520:intron 50.0%
GAAGAACAAGGATGCGAACC+TGG + chr6_4:5995052-5995071 Msa0973530:CDS 50.0%
CAGATTCACACTCGTGGTTG+TGG + chr6_4:5995925-5995944 None:intergenic 50.0%
TGGTGACAGATTCACACTCG+TGG + chr6_4:5995931-5995950 None:intergenic 50.0%
TCCGACGAGCAAAACGATTC+CGG + chr6_4:5996240-5996259 None:intergenic 50.0%
! GTTTTGCTCGTCGGAGAAGA+AGG - chr6_4:5996245-5996264 Msa0973520:intron 50.0%
TCTCTCACCAAAACACAGGC+CGG + chr6_4:5996276-5996295 None:intergenic 50.0%
GGGTATGAGCTGAAAAGGCT+AGG - chr6_4:5996329-5996348 Msa0973520:intron 50.0%
TCATCACGTGTTCTCCCACA+TGG + chr6_4:5996745-5996764 None:intergenic 50.0%
GGGGAACTATGGTCACAACT+AGG - chr6_4:5986052-5986071 Msa0973520:CDS 50.0%
CTTTATGGTCCTCCAGGAAC+TGG - chr6_4:5997631-5997650 Msa0973520:CDS 50.0%
! GATGGGATTTGGTCAGCATG+TGG - chr6_4:5997949-5997968 Msa0973520:CDS 50.0%
GGTCAGCATGTGGATCAGAA+AGG - chr6_4:5997959-5997978 Msa0973520:CDS 50.0%
GATCCTGCTCTCATAAGGAG+GGG - chr6_4:5998018-5998037 Msa0973520:CDS 50.0%
GGATGAGGAAGCAAAGCTCA+AGG - chr6_4:5998311-5998330 Msa0973520:intron 50.0%
GGTCAGCTTGTGGATCAGAG+AGG - chr6_4:5987112-5987131 Msa0973520:CDS 55.0%
TGTAGAAGGTAAGGGGCGGA+TGG + chr6_4:5990608-5990627 None:intergenic 55.0%
TTAACTCGCGCATAGGCCAG+TGG + chr6_4:5991392-5991411 None:intergenic 55.0%
GCGTGAGTTAACTCGCGCAT+AGG + chr6_4:5991399-5991418 None:intergenic 55.0%
GCGAGTTAACTCACGCACGT+TGG - chr6_4:5991403-5991422 Msa0973520:intron 55.0%
AGAGGGAGAGAGTGAGGAGA+GGG + chr6_4:5991617-5991636 None:intergenic 55.0%
TAGAGGGAGAGAGTGAGGAG+AGG + chr6_4:5991618-5991637 None:intergenic 55.0%
GGTCGATCACTTCCCCAAGT+CGG + chr6_4:5991726-5991745 None:intergenic 55.0%
GGTGCATGTTAACTGGCGCA+AGG + chr6_4:5992321-5992340 None:intergenic 55.0%
! GCATTTTCGGCATGGCTGCA+GGG - chr6_4:5992395-5992414 Msa0973520:intron 55.0%
TGCGAGCAAAACGTGCTTGG+TGG - chr6_4:5992418-5992437 Msa0973520:intron 55.0%
TTGCAGGAACCACACAACGC+TGG + chr6_4:5992814-5992833 None:intergenic 55.0%
GGCGCGCGAGAAAAGTCATA+GGG - chr6_4:5993367-5993386 Msa0973520:intron 55.0%
GCGCGAGAAAAGTCATAGGG+TGG - chr6_4:5993370-5993389 Msa0973520:intron 55.0%
AACCATCCACCAAGAGGAGC+AGG - chr6_4:5993729-5993748 Msa0973520:intron 55.0%
!!! GTTTTGAAACTCCGGCACGG+TGG - chr6_4:5996195-5996214 Msa0973520:intron 55.0%
CGAGCAAAACGATTCCGGCA+CGG + chr6_4:5996235-5996254 None:intergenic 55.0%
! GCCGGAATCGTTTTGCTCGT+CGG - chr6_4:5996236-5996255 Msa0973520:intron 55.0%
CTTCCCCTCCTTATGAGAGC+AGG + chr6_4:5998024-5998043 None:intergenic 55.0%
CTCTCGATCTCACCGGGCAA+AGG - chr6_4:5986959-5986978 Msa0973520:CDS 60.0%
GGATGAGGAAGCTCGGCTCA+AGG - chr6_4:5987464-5987483 Msa0973520:CDS 60.0%
CTAATGAAGGGAACCGCCCC+TGG + chr6_4:5988254-5988273 None:intergenic 60.0%
TGGCCCCCCAAGAAACTCAC+AGG + chr6_4:5989865-5989884 None:intergenic 60.0%
CGCGAGCAAAATGTGCTGGG+TGG + chr6_4:5991272-5991291 None:intergenic 60.0%
GGGCGCGAGCAAAATGTGCT+GGG + chr6_4:5991275-5991294 None:intergenic 60.0%
AGGGCGCGAGCAAAATGTGC+TGG + chr6_4:5991276-5991295 None:intergenic 60.0%
AACTCACGCACGTTGGTCGG+TGG - chr6_4:5991410-5991429 Msa0973520:intron 60.0%
! GCGCATGGGCATTTTCGGCA+TGG - chr6_4:5992387-5992406 Msa0973520:intron 60.0%
! GGCATTTTCGGCATGGCTGC+AGG - chr6_4:5992394-5992413 Msa0973520:intron 60.0%
GGGTGCGAGCAAAACGTGCT+TGG - chr6_4:5992415-5992434 Msa0973520:intron 60.0%
GGGCGCGCGAGAAAAGTCAT+AGG - chr6_4:5993366-5993385 Msa0973520:intron 60.0%
TGCCTGCTCCTCTTGGTGGA+TGG + chr6_4:5993734-5993753 None:intergenic 60.0%
GCAAAACGATTCCGGCACGG+TGG + chr6_4:5996232-5996251 None:intergenic 60.0%
GCTCGTCGGAGAAGAAGGAG+TGG - chr6_4:5996250-5996269 Msa0973520:intron 60.0%
GTCGGAGAAGAAGGAGTGGC+CGG - chr6_4:5996254-5996273 Msa0973520:intron 60.0%
CTCTCGATCTCACCGGGCAA+AGG - chr6_4:5986959-5986978 Msa0973520:CDS 60.0%
! GGAGTGGCCGGCCTGTGTTT+TGG - chr6_4:5996266-5996285 Msa0973520:intron 65.0%
CCGATGGTGCACCACCGTGC+CGG + chr6_4:5996209-5996228 None:intergenic 70.0%
CCGGCACGGTGGTGCACCAT+CGG - chr6_4:5996206-5996225 Msa0973520:intron 70.0%
TGCACCATCGGCCACCGTGC+CGG - chr6_4:5996218-5996237 Msa0973520:intron 70.0%
GATTCCGGCACGGTGGCCGA+TGG + chr6_4:5996225-5996244 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 5986037 5998464 5986037 ID=Msa0973520;Name=Msa0973520
chr6_4 mRNA 5986037 5998464 5986037 ID=Msa0973520-mRNA-1;Parent=Msa0973520;Name=Msa0973520-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|0|0.14|7|0|948
chr6_4 exon 5998362 5998464 5998362 ID=Msa0973520-mRNA-1:exon:2536;Parent=Msa0973520-mRNA-1
chr6_4 exon 5997900 5998280 5997900 ID=Msa0973520-mRNA-1:exon:2535;Parent=Msa0973520-mRNA-1
chr6_4 exon 5997579 5997767 5997579 ID=Msa0973520-mRNA-1:exon:2534;Parent=Msa0973520-mRNA-1
chr6_4 exon 5997417 5997563 5997417 ID=Msa0973520-mRNA-1:exon:2533;Parent=Msa0973520-mRNA-1
chr6_4 exon 5997137 5997383 5997137 ID=Msa0973520-mRNA-1:exon:2532;Parent=Msa0973520-mRNA-1
chr6_4 exon 5996908 5997112 5996908 ID=Msa0973520-mRNA-1:exon:2531;Parent=Msa0973520-mRNA-1
chr6_4 exon 5986037 5987611 5986037 ID=Msa0973520-mRNA-1:exon:2530;Parent=Msa0973520-mRNA-1
chr6_4 CDS 5998362 5998464 5998362 ID=Msa0973520-mRNA-1:cds;Parent=Msa0973520-mRNA-1
chr6_4 CDS 5997900 5998280 5997900 ID=Msa0973520-mRNA-1:cds;Parent=Msa0973520-mRNA-1
chr6_4 CDS 5997579 5997767 5997579 ID=Msa0973520-mRNA-1:cds;Parent=Msa0973520-mRNA-1
chr6_4 CDS 5997417 5997563 5997417 ID=Msa0973520-mRNA-1:cds;Parent=Msa0973520-mRNA-1
chr6_4 CDS 5997137 5997383 5997137 ID=Msa0973520-mRNA-1:cds;Parent=Msa0973520-mRNA-1
chr6_4 CDS 5996908 5997112 5996908 ID=Msa0973520-mRNA-1:cds;Parent=Msa0973520-mRNA-1
chr6_4 CDS 5986037 5987611 5986037 ID=Msa0973520-mRNA-1:cds;Parent=Msa0973520-mRNA-1
Gene Sequence

>Msa0973520

ATGAAGATGGGAATTGGGGAACTATGGTCACAACTAGGTTCAATCACGGCTGGCATAATGTTTGTGTATGCCATGTTTGACAAATTTTTCCCACCTTATCTTCGTGAACGTCTCAAACAAAGTGAAACTTACAAAATCATCCAAACATATCTTAGTGCAAACTCATCACAAAGAGCAAGAAGACTTAAAGCTGAAGTTGTGAAAGATAGTCAAACCCCACTTGTTCTAAGCATGGATGATAATGAAGAAATCATAGATGAGTTCAATGGAGTCAAAGTTTGGTGGACTGCTAATTACACCACCTCAAAATCACAATCATTTTCTTACTATCCTACTTCAGATGAAAAAAGATTCTTAACCCTAACTTTCCACAAAAAGCATCGTGAACTCATCACTACCTCTTACATTCAACATGTGTTGGATGAAGGGAAAGCTATTATGAGCAAGAATAGGCAGTTAAAGCTTTACACCAACAACCCTAGTAGTAAAGAGTATTATGCTAAAGTTGGAAAAGCTTGGAAACGTGGTTATCTACTTTATGGTCCACCAGGAACTGGAAAGTCTACCATGATATCAGCTATAGCAAATTTCATGAACTATGATGTGTATGATCTTGAGTTAACAACTGTTAAGGATAACAATGAGTTGAAGAGACTCTTGATTGAGACGTCGATTATCGAAGATATTGATTGTTCTCTCGATCTCACCGGGCAAAGGAAGAAGAAAGAAGAGAAAGATGATGATGAGAATGATGAAAAGAAGGATCCTATTAAGAAAGCTGAAAAAGAAGAGAAAAATGAAAGTAAGGTAACTCTTTCTGCTTGTGGATCAGAGAGGATCATAATTTTCACAACAAATTTTGTGGATAAACTTGATCCTGCTCTTATAAGGAGGGGAAGAATGGATAAGCATATAGAAATGGGTTATTGTAGCTATCAAGCTTTCAAGGTTCTTGCAAGAAACTACTTAGATGTTGAGTCTCATGAAGATTTGTTTCCAATTATTGAAAAGTTGTTGGGAGAGACTAATATGACACCTGCTGATGTTGCTGAGAATTTGATGCCAAATTGCTTGAAGAATTTGATTCAATCTCTTGAGATTGCAAAGAAAAAGGATGAGGAGGAAGCAAGGAAAAAGGTAGAGGATGAGGAAGCTCGGCTCAAGGCAGAGAAAGAGAAAGAGAAACAAAAATTGACTCAAGAGGAAGAAAAGGTTAAGGTTGATGAAAAATTAGAGGAAAAAGTGAAGGAGAATGGTGTCAAAGACAATGGTATGGGAATTGGGGAACTATGGTCACAACTAGGTTCAATCACGGCTAGCATAATGTTTGTGTATGCCATGTTTGACAAATTTTTCCCACCTAATCTTCGTAGATATTTTCTAAAATACACAAACAAATTCACAAACTTTATGTATCCATACATCCACATAAAGTTTCATGAATTATCAGGAGAACGTCTCAAACAAAGTGAAACTTACAAAATCATCCAAACATATCTTAGTGCAAACTCATCACAAAGAGCAAGAAGACTTAAAGCTGAAGTTGTCAAAGATAGCCAAAAACCACTTGTTCTTAGCATGGATGACAATGAAGAAATCATAGATGAGTTCAATGGAGTCAAAGTTTGGTGGACTGCTAATTACACCACCTCAAAATCACAATCATTTTCTTACTATCCTACTTCAGATGAAAAAAGATTCTTAACCCTAACCTTCCATAAAAAGCATCGTGAACTCATCACTACCTCTTACATTCAACATGTGTTGGATGAAGGAAAAGCTATTATGAGCAAGAATAGGCAACTAAAGCTTTACACAAATAACCCTAGTAGTAATTGGTGGGGGTATAAAAGCACAAAGTGGAATCACACAACTTTTGAGCATCCTGCAAGATTTGGAAACCTAGCTATGGAACCAGAAAAGAAACAAGAGATTTTAAATGATCTTCTTAAGTTCAAGAAAGGTAAAGAGTATTATGCTAAAGTTGGAAAAGCTTGGAAACGTGGTTATCTACTTTATGGTCCTCCAGGAACTGGAAAATCTACAATGATATCTGCTATAGCAAATTTCATGAACTATGATGTGTATGATCTTGAGTTAACAACTGTTAAGGATAACAATGAGTTGAAAAGACTCTTGATTGAGACGTCGAGTAAATCGATTATAGTTATCGAAGATATTGATTGTTCTCTCGATCTCACCGGGCAAAGGAAGAAGAAAAAAGAGAAAGATGATGATGAGACTGATGAAAAGAAGGATCCTATTAAGAAAGCTGAAAAAGAAGAGAAAAATGAAAGTAAGGTAACTCTTTCTGGTTTGTTGAATTTTATTGATGGGATTTGGTCAGCATGTGGATCAGAAAGGATCATAATTTTCACAACAAATTTTGTGGACAAACTTGATCCTGCTCTCATAAGGAGGGGAAGAATGGATAAGCATATTGAAATGTCTTATTGTAGCTATCAAGCTTTTAAGGTTCTTGCAAGAAACTACTTGGATGTTGAGTCTCATGATGATTTGTTTCCAATTATTGAAAAGTTGTTGGGAGAGACTAATATGACACCTGCTGATGTTGCTGAGAATTTGATGCCAAAGTCAATCACTGAAGATTTTGAAAGTTGCTTGAAGACTTTGATTCAATCTCTTGAGGAAAAAAAGAAAAAGGATGAGGAGGAAGCAAAGAAAAAGATAGAGGATGAGGAAGCAAAGCTCAAGGCAGAGAAAGAGAAACAAGAATTGATCACTCAAGAGGAAGAAAAGGTTAAGGTTGATGAAAAGTTAGAGGAAAAGGTGAAGGAGAATGGTGTCAAAGAGAATGGTGTGAAAGAGAACGGTGTCATCACTTAA
Protein sequence

>Msa0973520

MKMGIGELWSQLGSITAGIMFVYAMFDKFFPPYLRERLKQSETYKIIQTYLSANSSQRARRLKAEVVKDSQTPLVLSMDDNEEIIDEFNGVKVWWTANYTTSKSQSFSYYPTSDEKRFLTLTFHKKHRELITTSYIQHVLDEGKAIMSKNRQLKLYTNNPSSKEYYAKVGKAWKRGYLLYGPPGTGKSTMISAIANFMNYDVYDLELTTVKDNNELKRLLIETSIIEDIDCSLDLTGQRKKKEEKDDDENDEKKDPIKKAEKEEKNESKVTLSACGSERIIIFTTNFVDKLDPALIRRGRMDKHIEMGYCSYQAFKVLARNYLDVESHEDLFPIIEKLLGETNMTPADVAENLMPNCLKNLIQSLEIAKKKDEEEARKKVEDEEARLKAEKEKEKQKLTQEEEKVKVDEKLEEKVKENGVKDNGMGIGELWSQLGSITASIMFVYAMFDKFFPPNLRRYFLKYTNKFTNFMYPYIHIKFHELSGERLKQSETYKIIQTYLSANSSQRARRLKAEVVKDSQKPLVLSMDDNEEIIDEFNGVKVWWTANYTTSKSQSFSYYPTSDEKRFLTLTFHKKHRELITTSYIQHVLDEGKAIMSKNRQLKLYTNNPSSNWWGYKSTKWNHTTFEHPARFGNLAMEPEKKQEILNDLLKFKKGKEYYAKVGKAWKRGYLLYGPPGTGKSTMISAIANFMNYDVYDLELTTVKDNNELKRLLIETSSKSIIVIEDIDCSLDLTGQRKKKKEKDDDETDEKKDPIKKAEKEEKNESKVTLSGLLNFIDGIWSACGSERIIIFTTNFVDKLDPALIRRGRMDKHIEMSYCSYQAFKVLARNYLDVESHDDLFPIIEKLLGETNMTPADVAENLMPKSITEDFESCLKTLIQSLEEKKKKDEEEAKKKIEDEEAKLKAEKEKQELITQEEEKVKVDEKLEEKVKENGVKENGVKENGVIT*