AlfalfaGEDB | Msa0377800

M. sativa cultivar zhongmu-4 / Msa0377800

KEGG: -
GO: GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009627 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009753 GO:0009755 GO:0009814 GO:0009862 GO:0009863 GO:0009864 GO:0009867 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0032870 GO:0035690 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0045087 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0046677 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048831 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071395 GO:0071407 GO:0071446 GO:0071495 GO:0080090 GO:0080134 GO:0098542 GO:0140110 GO:1900055 GO:1900056 GO:1901698 GO:1901700 GO:1901701 GO:1902679 GO:1903506 GO:1903507 GO:1905622 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377800	XP_013461494.1	93.210	324	8	3	1	324	1	310	0.0	603

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377800	sp\|Q9LY00\|WRK70_ARATH	44.144	222	106	5	13	234	7	210	1.57e-49	170

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377800	A0A072V0I2	93.210	324	8	3	1	324	1	310	0.0	603

TFs/TRs:

Gene ID	Type	Classification
Msa0377800	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0054310	Msa0377800	0.820038	8.470275e-53	-8.615850e-47
Msa0054330	Msa0377800	0.800683	1.284606e-48	-8.615850e-47
Msa0078830	Msa0377800	0.805018	1.634366e-49	-8.615850e-47
Msa0091930	Msa0377800	0.822698	2.060546e-53	-8.615850e-47
Msa0092910	Msa0377800	0.819240	1.288342e-52	-8.615850e-47
Msa0131420	Msa0377800	0.825422	4.729489e-54	-8.615850e-47
Msa0148720	Msa0377800	0.814025	1.900593e-51	-8.615850e-47
Msa0153450	Msa0377800	0.817907	2.584170e-52	-8.615850e-47
Msa0198640	Msa0377800	0.821150	4.705963e-53	-8.615850e-47
Msa0215590	Msa0377800	0.802321	5.931120e-49	-8.615850e-47
Msa0377800	Msa0414650	0.804880	1.746871e-49	-8.615850e-47
Msa0377800	Msa0419670	0.813937	1.987906e-51	-8.615850e-47
Msa0377800	Msa0426600	0.971274	6.602308e-133	-8.615850e-47
Msa0377800	Msa0431440	0.828826	7.245145e-55	-8.615850e-47
Msa0377800	Msa0459560	0.832477	9.244273e-56	-8.615850e-47
Msa0377800	Msa0466010	0.810901	9.152125e-51	-8.615850e-47
Msa0377800	Msa0472910	0.990975	2.947342e-185	-8.615850e-47
Msa0377800	Msa0476330	0.835626	1.504371e-56	-8.615850e-47
Msa0377800	Msa0506300	0.848395	6.297763e-60	-8.615850e-47
Msa0377800	Msa0517570	0.996583	2.011126e-229	-8.615850e-47
Msa0377800	Msa0518280	0.806390	8.419308e-50	-8.615850e-47
Msa0377800	Msa0520330	0.840637	7.712940e-58	-8.615850e-47
Msa0377800	Msa0568440	0.817250	3.635950e-52	-8.615850e-47
Msa0377800	Msa0574570	0.860556	1.902122e-63	-8.615850e-47
Msa0377800	Msa0574580	0.830585	2.703468e-55	-8.615850e-47
Msa0377800	Msa0647360	0.802938	4.424728e-49	-8.615850e-47
Msa0377800	Msa0708290	0.845407	4.139988e-59	-8.615850e-47
Msa0377800	Msa0708300	0.861878	7.526931e-64	-8.615850e-47
Msa0377800	Msa0745070	0.830969	2.177235e-55	-8.615850e-47
Msa0377800	Msa0780350	0.833172	6.211773e-56	-8.615850e-47
Msa0377800	Msa0780450	0.802479	5.502349e-49	-8.615850e-47
Msa0377800	Msa0825870	0.820036	8.477820e-53	-8.615850e-47
Msa0377800	Msa0834030	0.828941	6.794153e-55	-8.615850e-47
Msa0377800	Msa0870060	0.803064	4.165328e-49	-8.615850e-47
Msa0377800	Msa0936530	0.834536	2.831949e-56	-8.615850e-47
Msa0377800	Msa0936550	0.834624	2.691773e-56	-8.615850e-47
Msa0377800	Msa0952360	0.818960	1.491863e-52	-8.615850e-47
Msa0377800	Msa0972770	0.824393	8.272087e-54	-8.615850e-47
Msa0377800	Msa0973520	0.825818	3.810176e-54	-8.615850e-47
Msa0377800	Msa1026510	0.808616	2.837932e-50	-8.615850e-47
Msa0377800	Msa1074580	0.813163	2.941746e-51	-8.615850e-47
Msa0377800	Msa1154080	0.811304	7.486854e-51	-8.615850e-47
Msa0377800	Msa1177330	0.814860	1.242640e-51	-8.615850e-47
Msa0377800	Msa1201200	0.823177	1.593800e-53	-8.615850e-47
Msa0377800	Msa1236730	0.849006	4.264480e-60	-8.615850e-47
Msa0377800	Msa1252960	0.808106	3.644495e-50	-8.615850e-47
Msa0377800	Msa1269660	0.824402	8.230040e-54	-8.615850e-47
Msa0377800	Msa1317130	0.854800	9.668629e-62	-8.615850e-47
Msa0377800	Msa1344890	0.828365	9.361366e-55	-8.615850e-47
Msa0377800	Msa1353870	0.818892	1.546051e-52	-8.615850e-47
Msa0377800	Msa1353880	0.837943	3.856162e-57	-8.615850e-47
Msa0377800	Msa1418280	0.803736	3.023090e-49	-8.615850e-47
Msa0377800	Msa1458510	0.820964	5.191457e-53	-8.615850e-47
Msa0333650	Msa0377800	0.801303	9.595635e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377800	MtrunA17_Chr3g0128671	93.210	324	8	3	1	324	1	310	0.0	603
Msa0377800	MtrunA17_Chr5g0428351	40.816	294	101	11	5	289	82	311	2.53e-52	174
Msa0377800	MtrunA17_Chr7g0244971	39.000	200	93	5	17	210	15	191	5.53e-38	137
Msa0377800	MtrunA17_Chr7g0244981	37.915	211	100	7	7	210	4	190	2.08e-35	129
Msa0377800	MtrunA17_Chr8g0350621	38.806	201	99	6	18	216	8	186	1.18e-34	127
Msa0377800	MtrunA17_Chr8g0334541	38.571	210	97	6	18	226	6	184	3.57e-31	118
Msa0377800	MtrunA17_Chr3g0126391	33.190	232	123	9	15	229	5	221	8.38e-25	102
Msa0377800	MtrunA17_Chr2g0315361	32.819	259	132	10	14	256	13	245	1.00e-24	101
Msa0377800	MtrunA17_Chr2g0315371	33.772	228	125	7	3	222	5	214	2.10e-24	100
Msa0377800	MtrunA17_Chr2g0315381	34.783	230	115	8	9	222	7	217	3.36e-23	97.4
Msa0377800	MtrunA17_Chr7g0275531	30.097	206	126	4	7	212	2	189	2.54e-21	92.8
Msa0377800	MtrunA17_Chr8g0347251	56.716	67	29	0	134	200	129	195	1.33e-20	90.9
Msa0377800	MtrunA17_Chr8g0387981	33.679	193	106	6	17	200	12	191	5.21e-20	89.4
Msa0377800	MtrunA17_Chr5g0431811	39.706	68	41	0	142	209	673	740	8.76e-13	69.3
Msa0377800	MtrunA17_Chr7g0224801	46.377	69	33	2	131	199	84	148	3.10e-12	64.3
Msa0377800	MtrunA17_Chr4g0071521	40.000	90	44	2	125	206	221	308	5.05e-12	65.9
Msa0377800	MtrunA17_Chr8g0387501	46.154	65	33	1	134	198	122	184	5.80e-12	65.1
Msa0377800	MtrunA17_Chr8g0348311	41.026	78	41	2	125	199	136	211	9.86e-12	65.1
Msa0377800	MtrunA17_Chr1g0147881	38.462	91	44	3	125	205	238	326	1.12e-11	65.1
Msa0377800	MtrunA17_Chr5g0418781	38.372	86	49	2	142	227	125	206	1.54e-11	63.9
Msa0377800	MtrunA17_Chr7g0238921	52.632	57	24	1	142	198	125	178	6.73e-11	62.4
Msa0377800	MtrunA17_Chr8g0386241	32.110	109	64	3	90	198	59	157	9.76e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377800	AT3G56400.1	44.144	222	106	5	13	234	7	210	1.59e-50	170
Msa0377800	AT2G40750.1	34.259	324	185	7	10	310	8	326	1.80e-46	160
Msa0377800	AT5G24110.1	34.715	193	89	7	13	200	12	172	5.19e-23	97.4
Msa0377800	AT2G46400.1	30.357	224	102	5	13	226	4	183	9.03e-22	93.6
Msa0377800	AT4G11070.1	31.280	211	121	7	13	208	7	208	1.30e-21	93.6
Msa0377800	AT1G66550.1	34.054	185	97	4	18	202	10	169	2.78e-21	91.7
Msa0377800	AT1G66550.2	34.595	185	91	6	18	202	10	164	6.89e-21	90.5
Msa0377800	AT5G22570.1	28.704	216	114	4	18	217	11	202	7.42e-20	88.2
Msa0377800	AT1G66560.1	27.642	246	140	6	11	250	3	216	7.49e-20	87.4
Msa0377800	AT1G66600.1	29.752	242	136	5	18	259	10	217	9.50e-20	87.0
Msa0377800	AT5G01900.1	32.973	185	100	4	18	201	9	170	3.46e-19	85.9
Msa0377800	AT4G11070.2	29.126	206	100	6	13	208	7	176	1.27e-18	84.7
Msa0377800	AT2G40740.1	44.186	86	42	1	142	221	174	259	2.42e-18	84.0
Msa0377800	AT2G40740.3	44.186	86	42	1	142	221	183	268	3.06e-18	84.0
Msa0377800	AT4G23810.1	50.704	71	34	1	142	211	159	229	4.91e-18	83.6
Msa0377800	AT5G45260.1	35.714	154	92	4	47	198	1117	1265	2.58e-16	80.5
Msa0377800	AT1G80590.1	32.432	185	77	5	18	202	10	146	1.15e-14	72.8
Msa0377800	AT4G23550.1	49.153	59	28	1	140	198	139	195	7.44e-12	65.5
Msa0377800	AT5G52830.1	41.772	79	40	2	125	199	145	221	7.84e-12	65.9
Msa0377800	AT5G13080.1	43.243	74	38	2	126	199	53	122	2.50e-11	61.2
Msa0377800	AT2G46130.1	42.029	69	35	2	140	206	29	94	2.56e-11	60.5
Msa0377800	AT4G01250.1	38.961	77	42	3	125	198	109	183	5.73e-11	62.8
Msa0377800	AT1G69310.4	30.216	139	78	5	96	229	97	221	8.13e-11	62.4
Msa0377800	AT1G69310.2	30.216	139	78	5	96	229	97	221	8.13e-11	62.4
Msa0377800	AT1G69310.1	30.216	139	78	5	96	229	97	221	8.13e-11	62.4

Find 82 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAAATCTTGAAATTGATTT+TGG	0.027971	3_1:-78479565	Msa0377800:CDS
TATGTAATTTGGTACATTTC+TGG	0.119421	3_1:+78479898	None:intergenic
AACACTCATTTGCTATATTT+TGG	0.147599	3_1:+78481435	None:intergenic
TTGCAAGATGATCAAATTAA+TGG	0.188508	3_1:-78479273	Msa0377800:three_prime_UTR
TTGTTGGCAGTGACAGTTTC+AGG	0.206708	3_1:+78481406	None:intergenic
TGCAACCTTGGTCATGCTTC+CGG	0.212153	3_1:+78479956	None:intergenic
CATTCTCTGAAGATACTAAT+TGG	0.227820	3_1:-78479825	Msa0377800:CDS
TGATGTTACTGACAACTTAT+TGG	0.245112	3_1:-78479659	Msa0377800:CDS
GCAACCTTGGTCATGCTTCC+GGG	0.281835	3_1:+78479957	None:intergenic
TTCTATCAATTGTACCTGTT+TGG	0.295646	3_1:+78479927	None:intergenic
TTAAAATCAGACCACAAATT+AGG	0.299410	3_1:+78479634	None:intergenic
CAGAATCATGTGAATCATTC+AGG	0.322565	3_1:-78481190	Msa0377800:CDS
CATGTGAATCATTCAGGTTC+AGG	0.330373	3_1:-78481184	Msa0377800:CDS
CCTACATATAATATCATATA+TGG	0.331659	3_1:+78479344	None:intergenic
AGTAGTATTGTCGTCGTTGT+TGG	0.342310	3_1:+78479690	None:intergenic
GTAAATGAAAGGAAAATATT+AGG	0.347821	3_1:+78481571	None:intergenic
AAGAATCCTGTTTGTTCTGA+TGG	0.357623	3_1:-78481316	Msa0377800:CDS
GTCTCCTTCTGTTAAGGAAT+TGG	0.359709	3_1:-78481293	Msa0377800:CDS
GTTTGGTTGCTTTGCAACCT+TGG	0.376612	3_1:+78479944	None:intergenic
TAATTTGCAGGAGTTACTTC+AGG	0.382346	3_1:-78479984	Msa0377800:intron
GAAAGCCAATGTATGTAATT+TGG	0.392701	3_1:+78479887	None:intergenic
TGTTGGATTGGGTTAGGATT+TGG	0.397596	3_1:+78481493	None:intergenic
TCAGAGAATGAGACCATTTG+TGG	0.397937	3_1:+78479838	None:intergenic
TGATGGGTCTCCTTCTGTTA+AGG	0.399624	3_1:-78481299	Msa0377800:CDS
ACTCATAAAAGAGCTTCTTC+AGG	0.399737	3_1:-78481374	Msa0377800:CDS
TGTTGTTGTTGGATTGGGTT+AGG	0.404346	3_1:+78481487	None:intergenic
CAATTGGTGACACTCATTCC+TGG	0.409828	3_1:-78480846	Msa0377800:CDS
GTAGTATTGTCGTCGTTGTT+GGG	0.410207	3_1:+78479691	None:intergenic
TAAAACTTACAAATGGTAAC+TGG	0.414491	3_1:+78479371	None:intergenic
ATTCTCTGAAGATACTAATT+GGG	0.419258	3_1:-78479824	Msa0377800:CDS
CCTCTTCGATCCTTTGTAGT+TGG	0.426598	3_1:+78481079	None:intergenic
ACCATAGTCTCTAAAACAAT+TGG	0.428053	3_1:-78480862	Msa0377800:CDS
TTCAGGGGAACATGGTTCAT+TGG	0.430865	3_1:-78481167	Msa0377800:CDS
AGAATCCTGTTTGTTCTGAT+GGG	0.439454	3_1:-78481315	Msa0377800:CDS
ACCTTGGGAAATTAGAATTG+AGG	0.441878	3_1:+78480800	None:intergenic
TCCTTCTGTTAAGGAATTGG+TGG	0.442137	3_1:-78481290	Msa0377800:CDS
TAGTGGTGGAAGAAAAGAAA+AGG	0.447168	3_1:+78481522	None:intergenic
TTAGGATTTGGCAAATATAG+TGG	0.458785	3_1:+78481505	None:intergenic
TGCAATGAAACTAAAGGTTG+TGG	0.465134	3_1:-78479239	Msa0377800:three_prime_UTR
AGACCATTTGTGGAGTTTGT+AGG	0.471099	3_1:+78479848	None:intergenic
GTAGGCGTGTGCATATATAA+AGG	0.478171	3_1:-78479326	Msa0377800:three_prime_UTR
CTTCTGACCGTACTTTCTCC+AGG	0.478180	3_1:+78480828	None:intergenic
ACTTATTGGATCCTAATTTG+TGG	0.485951	3_1:-78479645	Msa0377800:CDS
CACCCTACAAACTCCACAAA+TGG	0.486229	3_1:-78479851	Msa0377800:CDS
ATGAAAGGAAAATATTAGGA+AGG	0.498685	3_1:+78481575	None:intergenic
ACAAAATGCAATGAAACTAA+AGG	0.505426	3_1:-78479245	Msa0377800:three_prime_UTR
ATGTGAATCATTCAGGTTCA+GGG	0.513638	3_1:-78481183	Msa0377800:CDS
CTCATAAAAGAGCTTCTTCA+GGG	0.513650	3_1:-78481373	Msa0377800:CDS
CATTCAGGTTCAGGGGAACA+TGG	0.514743	3_1:-78481175	Msa0377800:CDS
GCAGGAATACACAATATCCT+TGG	0.514816	3_1:+78479597	None:intergenic
TGGCAGATAAAACTTACAAA+TGG	0.519708	3_1:+78479364	None:intergenic
AGGTTGCAAAGCAACCAAAC+AGG	0.523803	3_1:-78479941	Msa0377800:CDS
GACCATTTGTGGAGTTTGTA+GGG	0.524922	3_1:+78479849	None:intergenic
AGTGGTGGAAGAAAAGAAAA+GGG	0.528613	3_1:+78481523	None:intergenic
AGGGGAACATGGTTCATTGG+TGG	0.531988	3_1:-78481164	Msa0377800:CDS
GGAGACCCATCAGAACAAAC+AGG	0.533380	3_1:+78481310	None:intergenic
GCAATGAAACTAAAGGTTGT+GGG	0.536305	3_1:-78479238	None:intergenic
CACATGTTATTAGCTCAGAA+AGG	0.537868	3_1:-78479735	Msa0377800:CDS
GAAGAGGTTCCTACAAAAGA+AGG	0.538026	3_1:-78481063	Msa0377800:intron
CCATATATGATATTATATGT+AGG	0.552215	3_1:-78479344	Msa0377800:three_prime_UTR
TGAAAGGAAAATATTAGGAA+GGG	0.553632	3_1:+78481576	None:intergenic
GCCACCAATTCCTTAACAGA+AGG	0.556097	3_1:+78481289	None:intergenic
TGAAGATTGTAGTTTAGATG+AGG	0.565987	3_1:-78481218	Msa0377800:CDS
ATGTACCAAATTACATACAT+TGG	0.567198	3_1:-78479892	Msa0377800:CDS
CTGGAGAAAGTACGGTCAGA+AGG	0.567429	3_1:-78480827	Msa0377800:CDS
TCCTCAATTCTAATTTCCCA+AGG	0.568294	3_1:-78480801	Msa0377800:intron
GTCAGAACCTCCTTTGAGTG+AGG	0.572819	3_1:+78479778	None:intergenic
GAAAGTGGGATGTAAATGAA+AGG	0.574023	3_1:+78481560	None:intergenic
GGAGTTACTTCAGGTGCACC+CGG	0.575709	3_1:-78479975	Msa0377800:CDS
ACTCATTCCTGGAGAAAGTA+CGG	0.586004	3_1:-78480835	Msa0377800:CDS
GAGATTGTCGCCAACTACAA+AGG	0.592832	3_1:-78481089	Msa0377800:CDS
GGATTTGGCAAATATAGTGG+TGG	0.605725	3_1:+78481508	None:intergenic
GAATTCTAATCCTCACTCAA+AGG	0.633382	3_1:-78479788	Msa0377800:CDS
CATTTGTGGAGTTTGTAGGG+TGG	0.641904	3_1:+78479852	None:intergenic
TTCTAATCCTCACTCAAAGG+AGG	0.641909	3_1:-78479785	Msa0377800:CDS
TTGTCAGTAACATCACTCCT+CGG	0.646183	3_1:+78479667	None:intergenic
TGTGAATCATTCAGGTTCAG+GGG	0.655461	3_1:-78481182	Msa0377800:CDS
TGCACCCGGAAGCATGACCA+AGG	0.656558	3_1:-78479961	Msa0377800:CDS
GTACATCAAATTGACAGACG+TGG	0.690360	3_1:+78479444	None:intergenic
GCAGGAAAACAGATGAGACA+AGG	0.694593	3_1:-78480885	Msa0377800:intron
CCAACTACAAAGGATCGAAG+AGG	0.701163	3_1:-78481079	Msa0377800:CDS
ACGACGACAATACTACTCCG+AGG	0.763721	3_1:-78479684	Msa0377800:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GATATTTATTAAAATTGATT+TGG	-	chr3_1:78480309-78480328	Msa0377800:intron	10.0%
!!!	AAATTTTACACTTAAATTTA+TGG	-	chr3_1:78480390-78480409	Msa0377800:intron	10.0%
!!	AAAAAAAAAAACTAATTAGT+GGG	+	chr3_1:78480701-78480720	None:intergenic	10.0%
!!	AAAAAAAAAAAACTAATTAG+TGG	+	chr3_1:78480702-78480721	None:intergenic	10.0%
!!	GATATTTATTAAAATTGATT+TGG	-	chr3_1:78480309-78480328	Msa0377800:intron	10.0%
!!!	AAATTTTACACTTAAATTTA+TGG	-	chr3_1:78480390-78480409	Msa0377800:intron	10.0%
!!	AAAAAAAAAAACTAATTAGT+GGG	+	chr3_1:78480701-78480720	None:intergenic	10.0%
!!	AAAAAAAAAAAACTAATTAG+TGG	+	chr3_1:78480702-78480721	None:intergenic	10.0%
!!	TTAAGTGTAAAATTTACTTT+GGG	+	chr3_1:78480385-78480404	None:intergenic	15.0%
!!	TTTAAGTGTAAAATTTACTT+TGG	+	chr3_1:78480386-78480405	None:intergenic	15.0%
!!	ATATAATCTCATTTCAAAAT+CGG	+	chr3_1:78480657-78480676	None:intergenic	15.0%
!!!	AAAATCTTGAAATTGATTTT+GGG	-	chr3_1:78481278-78481297	Msa0377800:CDS	15.0%
!!	TTAAGTGTAAAATTTACTTT+GGG	+	chr3_1:78480385-78480404	None:intergenic	15.0%
!!	TTTAAGTGTAAAATTTACTT+TGG	+	chr3_1:78480386-78480405	None:intergenic	15.0%
!!	ATATAATCTCATTTCAAAAT+CGG	+	chr3_1:78480657-78480676	None:intergenic	15.0%
!!!	AAAATCTTGAAATTGATTTT+GGG	-	chr3_1:78481278-78481297	Msa0377800:CDS	15.0%
!!	GTAAATGAAAGGAAAATATT+AGG	+	chr3_1:78479274-78479293	None:intergenic	20.0%
!!	TAGAAAACAAAAAAATCAAC+AGG	+	chr3_1:78479871-78479890	None:intergenic	20.0%
!!	TTTATTCTTAATTATTGTGC+AGG	-	chr3_1:78479939-78479958	Msa0377800:CDS	20.0%
!!	TTAGATGTGTATAATTGATT+TGG	-	chr3_1:78480274-78480293	Msa0377800:intron	20.0%
!!	TAAGTGTAAAATTTACTTTG+GGG	+	chr3_1:78480384-78480403	None:intergenic	20.0%
!!	TTACACTTAAATTTATGGTT+AGG	-	chr3_1:78480395-78480414	Msa0377800:intron	20.0%
!!	TTATAGTTTCAACAAAATCA+TGG	-	chr3_1:78480584-78480603	Msa0377800:intron	20.0%
!!	GAATTGATTAACTAATTAGT+GGG	+	chr3_1:78480734-78480753	None:intergenic	20.0%
!!	TGAATTGATTAACTAATTAG+TGG	+	chr3_1:78480735-78480754	None:intergenic	20.0%
!!!	CAAAATCTTGAAATTGATTT+TGG	-	chr3_1:78481277-78481296	Msa0377800:CDS	20.0%
!!!	AAATCTTGAAATTGATTTTG+GGG	-	chr3_1:78481279-78481298	Msa0377800:CDS	20.0%
!!	CCTACATATAATATCATATA+TGG	+	chr3_1:78481501-78481520	None:intergenic	20.0%
!!	CCATATATGATATTATATGT+AGG	-	chr3_1:78481498-78481517	Msa0377800:five_prime_UTR	20.0%
!!	GTAAATGAAAGGAAAATATT+AGG	+	chr3_1:78479274-78479293	None:intergenic	20.0%
!!	TAGAAAACAAAAAAATCAAC+AGG	+	chr3_1:78479871-78479890	None:intergenic	20.0%
!!	TTTATTCTTAATTATTGTGC+AGG	-	chr3_1:78479939-78479958	Msa0377800:CDS	20.0%
!!	TTAGATGTGTATAATTGATT+TGG	-	chr3_1:78480274-78480293	Msa0377800:intron	20.0%
!!	TAAGTGTAAAATTTACTTTG+GGG	+	chr3_1:78480384-78480403	None:intergenic	20.0%
!!	TTACACTTAAATTTATGGTT+AGG	-	chr3_1:78480395-78480414	Msa0377800:intron	20.0%
!!	TTATAGTTTCAACAAAATCA+TGG	-	chr3_1:78480584-78480603	Msa0377800:intron	20.0%
!!	GAATTGATTAACTAATTAGT+GGG	+	chr3_1:78480734-78480753	None:intergenic	20.0%
!!	TGAATTGATTAACTAATTAG+TGG	+	chr3_1:78480735-78480754	None:intergenic	20.0%
!!!	CAAAATCTTGAAATTGATTT+TGG	-	chr3_1:78481277-78481296	Msa0377800:CDS	20.0%
!!!	AAATCTTGAAATTGATTTTG+GGG	-	chr3_1:78481279-78481298	Msa0377800:CDS	20.0%
!!	CCTACATATAATATCATATA+TGG	+	chr3_1:78481501-78481520	None:intergenic	20.0%
!!	CCATATATGATATTATATGT+AGG	-	chr3_1:78481498-78481517	Msa0377800:five_prime_UTR	20.0%
!	TGAAAGGAAAATATTAGGAA+GGG	+	chr3_1:78479269-78479288	None:intergenic	25.0%
!	ATGAAAGGAAAATATTAGGA+AGG	+	chr3_1:78479270-78479289	None:intergenic	25.0%
!!!	AACACTCATTTGCTATATTT+TGG	+	chr3_1:78479410-78479429	None:intergenic	25.0%
!!	AAAATAGTACCTTCTTTTGT+AGG	+	chr3_1:78479791-78479810	None:intergenic	25.0%
!!!	AAGAAGGTACTATTTTTGTA+CGG	-	chr3_1:78479795-78479814	Msa0377800:CDS	25.0%
!	AGGAAAATAATGATTACCTT+GGG	+	chr3_1:78480060-78480079	None:intergenic	25.0%
!	ACTTGCTCATATTGTATAAA+TGG	+	chr3_1:78480143-78480162	None:intergenic	25.0%
!!!	AGATTATAGAAGCATTTTAG+AGG	-	chr3_1:78480246-78480265	Msa0377800:intron	25.0%
!	TCAACTCTTACAAAATCAAT+TGG	-	chr3_1:78480486-78480505	Msa0377800:intron	25.0%
!	TGAGATTATATACTATCAAG+TGG	-	chr3_1:78480666-78480685	Msa0377800:intron	25.0%
!	TATGTAATTTGGTACATTTC+TGG	+	chr3_1:78480947-78480966	None:intergenic	25.0%
!	ATGTACCAAATTACATACAT+TGG	-	chr3_1:78480950-78480969	Msa0377800:intron	25.0%
!!	ATTCTCTGAAGATACTAATT+GGG	-	chr3_1:78481018-78481037	Msa0377800:intron	25.0%
!	TTAAAATCAGACCACAAATT+AGG	+	chr3_1:78481211-78481230	None:intergenic	25.0%
!!!	TAATTTGTGGTCTGATTTTA+AGG	-	chr3_1:78481210-78481229	Msa0377800:CDS	25.0%
!	TAAAACTTACAAATGGTAAC+TGG	+	chr3_1:78481474-78481493	None:intergenic	25.0%
!	TTGCAAGATGATCAAATTAA+TGG	-	chr3_1:78481569-78481588	Msa0377800:five_prime_UTR	25.0%
!!!	TTTAGTTTCATTGCATTTTG+TGG	+	chr3_1:78481598-78481617	None:intergenic	25.0%
!	ACAAAATGCAATGAAACTAA+AGG	-	chr3_1:78481597-78481616	Msa0377800:five_prime_UTR	25.0%
!	TGAAAGGAAAATATTAGGAA+GGG	+	chr3_1:78479269-78479288	None:intergenic	25.0%
!	ATGAAAGGAAAATATTAGGA+AGG	+	chr3_1:78479270-78479289	None:intergenic	25.0%
!!!	AACACTCATTTGCTATATTT+TGG	+	chr3_1:78479410-78479429	None:intergenic	25.0%
!!	AAAATAGTACCTTCTTTTGT+AGG	+	chr3_1:78479791-78479810	None:intergenic	25.0%
!!!	AAGAAGGTACTATTTTTGTA+CGG	-	chr3_1:78479795-78479814	Msa0377800:CDS	25.0%
!	AGGAAAATAATGATTACCTT+GGG	+	chr3_1:78480060-78480079	None:intergenic	25.0%
!	ACTTGCTCATATTGTATAAA+TGG	+	chr3_1:78480143-78480162	None:intergenic	25.0%
!!!	AGATTATAGAAGCATTTTAG+AGG	-	chr3_1:78480246-78480265	Msa0377800:intron	25.0%
!	TCAACTCTTACAAAATCAAT+TGG	-	chr3_1:78480486-78480505	Msa0377800:intron	25.0%
!	TGAGATTATATACTATCAAG+TGG	-	chr3_1:78480666-78480685	Msa0377800:intron	25.0%
!	TATGTAATTTGGTACATTTC+TGG	+	chr3_1:78480947-78480966	None:intergenic	25.0%
!	ATGTACCAAATTACATACAT+TGG	-	chr3_1:78480950-78480969	Msa0377800:intron	25.0%
!!	ATTCTCTGAAGATACTAATT+GGG	-	chr3_1:78481018-78481037	Msa0377800:intron	25.0%
!	TTAAAATCAGACCACAAATT+AGG	+	chr3_1:78481211-78481230	None:intergenic	25.0%
!!!	TAATTTGTGGTCTGATTTTA+AGG	-	chr3_1:78481210-78481229	Msa0377800:CDS	25.0%
!	TAAAACTTACAAATGGTAAC+TGG	+	chr3_1:78481474-78481493	None:intergenic	25.0%
!	TTGCAAGATGATCAAATTAA+TGG	-	chr3_1:78481569-78481588	Msa0377800:five_prime_UTR	25.0%
!!!	TTTAGTTTCATTGCATTTTG+TGG	+	chr3_1:78481598-78481617	None:intergenic	25.0%
!	ACAAAATGCAATGAAACTAA+AGG	-	chr3_1:78481597-78481616	Msa0377800:five_prime_UTR	25.0%
!!	TATGTTTTTGCTAGGAAAGT+GGG	+	chr3_1:78479299-78479318	None:intergenic	30.0%
	TTAGGATTTGGCAAATATAG+TGG	+	chr3_1:78479340-78479359	None:intergenic	30.0%
!!!	TTTGCTATATTTTGGTGTAG+TGG	+	chr3_1:78479402-78479421	None:intergenic	30.0%
!	TATGAGTAGCTTCTTTTTGT+TGG	+	chr3_1:78479455-78479474	None:intergenic	30.0%
	TGAAGATTGTAGTTTAGATG+AGG	-	chr3_1:78479624-78479643	Msa0377800:CDS	30.0%
!!	ACCATAGTCTCTAAAACAAT+TGG	-	chr3_1:78479980-78479999	Msa0377800:intron	30.0%
!!!	ACCAATTGTTTTAGAGACTA+TGG	+	chr3_1:78479984-78480003	None:intergenic	30.0%
	GAGGAAAATAATGATTACCT+TGG	+	chr3_1:78480061-78480080	None:intergenic	30.0%
	AAATCAGTAGAAAAAAGCAG+AGG	+	chr3_1:78480080-78480099	None:intergenic	30.0%
	ATATTGAAACATGCACATAG+CGG	+	chr3_1:78480533-78480552	None:intergenic	30.0%
	ATGTGCATGTTTCAATATCA+TGG	-	chr3_1:78480535-78480554	Msa0377800:intron	30.0%
	CCTGCAAATTATCATTGAAA+AGG	+	chr3_1:78480849-78480868	None:intergenic	30.0%
!!	CCTTTTCAATGATAATTTGC+AGG	-	chr3_1:78480846-78480865	Msa0377800:CDS	30.0%
	TTCTATCAATTGTACCTGTT+TGG	+	chr3_1:78480918-78480937	None:intergenic	30.0%
	GAAAGCCAATGTATGTAATT+TGG	+	chr3_1:78480958-78480977	None:intergenic	30.0%
!	CATTCTCTGAAGATACTAAT+TGG	-	chr3_1:78481017-78481036	Msa0377800:intron	30.0%
	TGATGTTACTGACAACTTAT+TGG	-	chr3_1:78481183-78481202	Msa0377800:CDS	30.0%
	ACTTATTGGATCCTAATTTG+TGG	-	chr3_1:78481197-78481216	Msa0377800:CDS	30.0%
	TGGCAGATAAAACTTACAAA+TGG	+	chr3_1:78481481-78481500	None:intergenic	30.0%
!!	TATGTTTTTGCTAGGAAAGT+GGG	+	chr3_1:78479299-78479318	None:intergenic	30.0%
	TTAGGATTTGGCAAATATAG+TGG	+	chr3_1:78479340-78479359	None:intergenic	30.0%
!!!	TTTGCTATATTTTGGTGTAG+TGG	+	chr3_1:78479402-78479421	None:intergenic	30.0%
!	TATGAGTAGCTTCTTTTTGT+TGG	+	chr3_1:78479455-78479474	None:intergenic	30.0%
	TGAAGATTGTAGTTTAGATG+AGG	-	chr3_1:78479624-78479643	Msa0377800:CDS	30.0%
!!	ACCATAGTCTCTAAAACAAT+TGG	-	chr3_1:78479980-78479999	Msa0377800:intron	30.0%
!!!	ACCAATTGTTTTAGAGACTA+TGG	+	chr3_1:78479984-78480003	None:intergenic	30.0%
	GAGGAAAATAATGATTACCT+TGG	+	chr3_1:78480061-78480080	None:intergenic	30.0%
	AAATCAGTAGAAAAAAGCAG+AGG	+	chr3_1:78480080-78480099	None:intergenic	30.0%
	ATATTGAAACATGCACATAG+CGG	+	chr3_1:78480533-78480552	None:intergenic	30.0%
	ATGTGCATGTTTCAATATCA+TGG	-	chr3_1:78480535-78480554	Msa0377800:intron	30.0%
	CCTGCAAATTATCATTGAAA+AGG	+	chr3_1:78480849-78480868	None:intergenic	30.0%
!!	CCTTTTCAATGATAATTTGC+AGG	-	chr3_1:78480846-78480865	Msa0377800:CDS	30.0%
	TTCTATCAATTGTACCTGTT+TGG	+	chr3_1:78480918-78480937	None:intergenic	30.0%
	GAAAGCCAATGTATGTAATT+TGG	+	chr3_1:78480958-78480977	None:intergenic	30.0%
!	CATTCTCTGAAGATACTAAT+TGG	-	chr3_1:78481017-78481036	Msa0377800:intron	30.0%
	TGATGTTACTGACAACTTAT+TGG	-	chr3_1:78481183-78481202	Msa0377800:CDS	30.0%
	ACTTATTGGATCCTAATTTG+TGG	-	chr3_1:78481197-78481216	Msa0377800:CDS	30.0%
	TGGCAGATAAAACTTACAAA+TGG	+	chr3_1:78481481-78481500	None:intergenic	30.0%
	GAAAGTGGGATGTAAATGAA+AGG	+	chr3_1:78479285-78479304	None:intergenic	35.0%
!!	GTATGTTTTTGCTAGGAAAG+TGG	+	chr3_1:78479300-78479319	None:intergenic	35.0%
!!	GAAAAGGGTATGTTTTTGCT+AGG	+	chr3_1:78479307-78479326	None:intergenic	35.0%
!	AGTGGTGGAAGAAAAGAAAA+GGG	+	chr3_1:78479322-78479341	None:intergenic	35.0%
!	TAGTGGTGGAAGAAAAGAAA+AGG	+	chr3_1:78479323-78479342	None:intergenic	35.0%
!	GTTGTTGTTGTTGTTGGATT+GGG	+	chr3_1:78479363-78479382	None:intergenic	35.0%
!	TGTTGTTGTTGTTGTTGGAT+TGG	+	chr3_1:78479364-78479383	None:intergenic	35.0%
!	GTTTGTGTTGTTGTTGTTGT+TGG	+	chr3_1:78479369-78479388	None:intergenic	35.0%
!!!	ATATTTTGGTGTAGTGGATC+AGG	+	chr3_1:78479396-78479415	None:intergenic	35.0%
	ACTCATAAAAGAGCTTCTTC+AGG	-	chr3_1:78479468-78479487	Msa0377800:three_prime_UTR	35.0%
	CTCATAAAAGAGCTTCTTCA+GGG	-	chr3_1:78479469-78479488	Msa0377800:three_prime_UTR	35.0%
	AAGAATCCTGTTTGTTCTGA+TGG	-	chr3_1:78479526-78479545	Msa0377800:CDS	35.0%
	AGAATCCTGTTTGTTCTGAT+GGG	-	chr3_1:78479527-78479546	Msa0377800:CDS	35.0%
	CAGAATCATGTGAATCATTC+AGG	-	chr3_1:78479652-78479671	Msa0377800:CDS	35.0%
!	ATGTGAATCATTCAGGTTCA+GGG	-	chr3_1:78479659-78479678	Msa0377800:CDS	35.0%
!!!	ACTATTTTTGTACGGACACA+AGG	-	chr3_1:78479803-78479822	Msa0377800:CDS	35.0%
!	TCCTTGTTGTAATGAAAACG+TGG	-	chr3_1:78479842-78479861	Msa0377800:CDS	35.0%
!	CCTTGTTGTAATGAAAACGT+GGG	-	chr3_1:78479843-78479862	Msa0377800:CDS	35.0%
	TCCTCAATTCTAATTTCCCA+AGG	-	chr3_1:78480041-78480060	Msa0377800:intron	35.0%
	ACCTTGGGAAATTAGAATTG+AGG	+	chr3_1:78480045-78480064	None:intergenic	35.0%
	TATGGTTAGGTTCACTTGTA+CGG	-	chr3_1:78480408-78480427	Msa0377800:intron	35.0%
!	TAATTTGCAGGAGTTACTTC+AGG	-	chr3_1:78480858-78480877	Msa0377800:CDS	35.0%
	GAATTCTAATCCTCACTCAA+AGG	-	chr3_1:78481054-78481073	Msa0377800:intron	35.0%
	CACATGTTATTAGCTCAGAA+AGG	-	chr3_1:78481107-78481126	Msa0377800:CDS	35.0%
!	TAAGGATTTTGAACTCTCCA+AGG	-	chr3_1:78481228-78481247	Msa0377800:CDS	35.0%
!!!	AAGATTTTGAGATTCAGTGC+AGG	+	chr3_1:78481266-78481285	None:intergenic	35.0%
!	AGTTTCATTGCATTTTGTGG+AGG	+	chr3_1:78481595-78481614	None:intergenic	35.0%
	TGCAATGAAACTAAAGGTTG+TGG	-	chr3_1:78481603-78481622	Msa0377800:five_prime_UTR	35.0%
	GAAAGTGGGATGTAAATGAA+AGG	+	chr3_1:78479285-78479304	None:intergenic	35.0%
!!	GTATGTTTTTGCTAGGAAAG+TGG	+	chr3_1:78479300-78479319	None:intergenic	35.0%
!!	GAAAAGGGTATGTTTTTGCT+AGG	+	chr3_1:78479307-78479326	None:intergenic	35.0%
!	AGTGGTGGAAGAAAAGAAAA+GGG	+	chr3_1:78479322-78479341	None:intergenic	35.0%
!	TAGTGGTGGAAGAAAAGAAA+AGG	+	chr3_1:78479323-78479342	None:intergenic	35.0%
!	GTTGTTGTTGTTGTTGGATT+GGG	+	chr3_1:78479363-78479382	None:intergenic	35.0%
!	TGTTGTTGTTGTTGTTGGAT+TGG	+	chr3_1:78479364-78479383	None:intergenic	35.0%
!	GTTTGTGTTGTTGTTGTTGT+TGG	+	chr3_1:78479369-78479388	None:intergenic	35.0%
!!!	ATATTTTGGTGTAGTGGATC+AGG	+	chr3_1:78479396-78479415	None:intergenic	35.0%
	ACTCATAAAAGAGCTTCTTC+AGG	-	chr3_1:78479468-78479487	Msa0377800:three_prime_UTR	35.0%
	CTCATAAAAGAGCTTCTTCA+GGG	-	chr3_1:78479469-78479488	Msa0377800:three_prime_UTR	35.0%
	AAGAATCCTGTTTGTTCTGA+TGG	-	chr3_1:78479526-78479545	Msa0377800:CDS	35.0%
	AGAATCCTGTTTGTTCTGAT+GGG	-	chr3_1:78479527-78479546	Msa0377800:CDS	35.0%
	CAGAATCATGTGAATCATTC+AGG	-	chr3_1:78479652-78479671	Msa0377800:CDS	35.0%
!	ATGTGAATCATTCAGGTTCA+GGG	-	chr3_1:78479659-78479678	Msa0377800:CDS	35.0%
!!!	ACTATTTTTGTACGGACACA+AGG	-	chr3_1:78479803-78479822	Msa0377800:CDS	35.0%
!	TCCTTGTTGTAATGAAAACG+TGG	-	chr3_1:78479842-78479861	Msa0377800:CDS	35.0%
!	CCTTGTTGTAATGAAAACGT+GGG	-	chr3_1:78479843-78479862	Msa0377800:CDS	35.0%
	TCCTCAATTCTAATTTCCCA+AGG	-	chr3_1:78480041-78480060	Msa0377800:intron	35.0%
	ACCTTGGGAAATTAGAATTG+AGG	+	chr3_1:78480045-78480064	None:intergenic	35.0%
	TATGGTTAGGTTCACTTGTA+CGG	-	chr3_1:78480408-78480427	Msa0377800:intron	35.0%
!	TAATTTGCAGGAGTTACTTC+AGG	-	chr3_1:78480858-78480877	Msa0377800:CDS	35.0%
	GAATTCTAATCCTCACTCAA+AGG	-	chr3_1:78481054-78481073	Msa0377800:intron	35.0%
	CACATGTTATTAGCTCAGAA+AGG	-	chr3_1:78481107-78481126	Msa0377800:CDS	35.0%
!	TAAGGATTTTGAACTCTCCA+AGG	-	chr3_1:78481228-78481247	Msa0377800:CDS	35.0%
!!!	AAGATTTTGAGATTCAGTGC+AGG	+	chr3_1:78481266-78481285	None:intergenic	35.0%
!	AGTTTCATTGCATTTTGTGG+AGG	+	chr3_1:78481595-78481614	None:intergenic	35.0%
	GGATTTGGCAAATATAGTGG+TGG	+	chr3_1:78479337-78479356	None:intergenic	40.0%
!	TGTTGGATTGGGTTAGGATT+TGG	+	chr3_1:78479352-78479371	None:intergenic	40.0%
!	TGTTGTTGTTGGATTGGGTT+AGG	+	chr3_1:78479358-78479377	None:intergenic	40.0%
	GTCTCCTTCTGTTAAGGAAT+TGG	-	chr3_1:78479549-78479568	Msa0377800:CDS	40.0%
	TCCTTCTGTTAAGGAATTGG+TGG	-	chr3_1:78479552-78479571	Msa0377800:CDS	40.0%
!	CATGTGAATCATTCAGGTTC+AGG	-	chr3_1:78479658-78479677	Msa0377800:CDS	40.0%
!	TGTGAATCATTCAGGTTCAG+GGG	-	chr3_1:78479660-78479679	Msa0377800:CDS	40.0%
	GAAGAGGTTCCTACAAAAGA+AGG	-	chr3_1:78479779-78479798	Msa0377800:CDS	40.0%
!	CCCACGTTTTCATTACAACA+AGG	+	chr3_1:78479846-78479865	None:intergenic	40.0%
	ACTCATTCCTGGAGAAAGTA+CGG	-	chr3_1:78480007-78480026	Msa0377800:intron	40.0%
!!	ATAGCGGATGTTTGGTTATG+CGG	+	chr3_1:78480517-78480536	None:intergenic	40.0%
	GACCATTTGTGGAGTTTGTA+GGG	+	chr3_1:78480996-78481015	None:intergenic	40.0%
	AGACCATTTGTGGAGTTTGT+AGG	+	chr3_1:78480997-78481016	None:intergenic	40.0%
	TCAGAGAATGAGACCATTTG+TGG	+	chr3_1:78481007-78481026	None:intergenic	40.0%
	TTCTAATCCTCACTCAAAGG+AGG	-	chr3_1:78481057-78481076	Msa0377800:intron	40.0%
	GTAGTATTGTCGTCGTTGTT+GGG	+	chr3_1:78481154-78481173	None:intergenic	40.0%
	AGTAGTATTGTCGTCGTTGT+TGG	+	chr3_1:78481155-78481174	None:intergenic	40.0%
	TTGTCAGTAACATCACTCCT+CGG	+	chr3_1:78481178-78481197	None:intergenic	40.0%
	GCAGGAATACACAATATCCT+TGG	+	chr3_1:78481248-78481267	None:intergenic	40.0%
	GTACATCAAATTGACAGACG+TGG	+	chr3_1:78481401-78481420	None:intergenic	40.0%
	GTAGGCGTGTGCATATATAA+AGG	-	chr3_1:78481516-78481535	Msa0377800:five_prime_UTR	40.0%
	GGATTTGGCAAATATAGTGG+TGG	+	chr3_1:78479337-78479356	None:intergenic	40.0%
!	TGTTGGATTGGGTTAGGATT+TGG	+	chr3_1:78479352-78479371	None:intergenic	40.0%
!	TGTTGTTGTTGGATTGGGTT+AGG	+	chr3_1:78479358-78479377	None:intergenic	40.0%
	GTCTCCTTCTGTTAAGGAAT+TGG	-	chr3_1:78479549-78479568	Msa0377800:CDS	40.0%
	TCCTTCTGTTAAGGAATTGG+TGG	-	chr3_1:78479552-78479571	Msa0377800:CDS	40.0%
!	CATGTGAATCATTCAGGTTC+AGG	-	chr3_1:78479658-78479677	Msa0377800:CDS	40.0%
!	TGTGAATCATTCAGGTTCAG+GGG	-	chr3_1:78479660-78479679	Msa0377800:CDS	40.0%
	GAAGAGGTTCCTACAAAAGA+AGG	-	chr3_1:78479779-78479798	Msa0377800:CDS	40.0%
!	CCCACGTTTTCATTACAACA+AGG	+	chr3_1:78479846-78479865	None:intergenic	40.0%
	ACTCATTCCTGGAGAAAGTA+CGG	-	chr3_1:78480007-78480026	Msa0377800:intron	40.0%
!!	ATAGCGGATGTTTGGTTATG+CGG	+	chr3_1:78480517-78480536	None:intergenic	40.0%
	GACCATTTGTGGAGTTTGTA+GGG	+	chr3_1:78480996-78481015	None:intergenic	40.0%
	AGACCATTTGTGGAGTTTGT+AGG	+	chr3_1:78480997-78481016	None:intergenic	40.0%
	TCAGAGAATGAGACCATTTG+TGG	+	chr3_1:78481007-78481026	None:intergenic	40.0%
	TTCTAATCCTCACTCAAAGG+AGG	-	chr3_1:78481057-78481076	Msa0377800:intron	40.0%
	GTAGTATTGTCGTCGTTGTT+GGG	+	chr3_1:78481154-78481173	None:intergenic	40.0%
	AGTAGTATTGTCGTCGTTGT+TGG	+	chr3_1:78481155-78481174	None:intergenic	40.0%
	TTGTCAGTAACATCACTCCT+CGG	+	chr3_1:78481178-78481197	None:intergenic	40.0%
	GCAGGAATACACAATATCCT+TGG	+	chr3_1:78481248-78481267	None:intergenic	40.0%
	GTACATCAAATTGACAGACG+TGG	+	chr3_1:78481401-78481420	None:intergenic	40.0%
	GTAGGCGTGTGCATATATAA+AGG	-	chr3_1:78481516-78481535	Msa0377800:five_prime_UTR	40.0%
	TTGTTGGCAGTGACAGTTTC+AGG	+	chr3_1:78479439-78479458	None:intergenic	45.0%
!	TGATGGGTCTCCTTCTGTTA+AGG	-	chr3_1:78479543-78479562	Msa0377800:CDS	45.0%
	GCCACCAATTCCTTAACAGA+AGG	+	chr3_1:78479556-78479575	None:intergenic	45.0%
	TTCAGGGGAACATGGTTCAT+TGG	-	chr3_1:78479675-78479694	Msa0377800:CDS	45.0%
	GAGATTGTCGCCAACTACAA+AGG	-	chr3_1:78479753-78479772	Msa0377800:CDS	45.0%
	CCTCTTCGATCCTTTGTAGT+TGG	+	chr3_1:78479766-78479785	None:intergenic	45.0%
	CCAACTACAAAGGATCGAAG+AGG	-	chr3_1:78479763-78479782	Msa0377800:CDS	45.0%
	GCAGGAAAACAGATGAGACA+AGG	-	chr3_1:78479957-78479976	Msa0377800:CDS	45.0%
!	CAATTGGTGACACTCATTCC+TGG	-	chr3_1:78479996-78480015	Msa0377800:intron	45.0%
!	TAGCGGATGTTTGGTTATGC+GGG	+	chr3_1:78480516-78480535	None:intergenic	45.0%
!!	ACATGCACATAGCGGATGTT+TGG	+	chr3_1:78480525-78480544	None:intergenic	45.0%
	AAACACTATACCAGCTAGCG+CGG	+	chr3_1:78480793-78480812	None:intergenic	45.0%
!	GTTTGGTTGCTTTGCAACCT+TGG	+	chr3_1:78480901-78480920	None:intergenic	45.0%
	AGGTTGCAAAGCAACCAAAC+AGG	-	chr3_1:78480901-78480920	Msa0377800:intron	45.0%
	CATTTGTGGAGTTTGTAGGG+TGG	+	chr3_1:78480993-78481012	None:intergenic	45.0%
	CACCCTACAAACTCCACAAA+TGG	-	chr3_1:78480991-78481010	Msa0377800:intron	45.0%
	TTGTTGGCAGTGACAGTTTC+AGG	+	chr3_1:78479439-78479458	None:intergenic	45.0%
!	TGATGGGTCTCCTTCTGTTA+AGG	-	chr3_1:78479543-78479562	Msa0377800:CDS	45.0%
	GCCACCAATTCCTTAACAGA+AGG	+	chr3_1:78479556-78479575	None:intergenic	45.0%
	TTCAGGGGAACATGGTTCAT+TGG	-	chr3_1:78479675-78479694	Msa0377800:CDS	45.0%
	GAGATTGTCGCCAACTACAA+AGG	-	chr3_1:78479753-78479772	Msa0377800:CDS	45.0%
	CCTCTTCGATCCTTTGTAGT+TGG	+	chr3_1:78479766-78479785	None:intergenic	45.0%
	CCAACTACAAAGGATCGAAG+AGG	-	chr3_1:78479763-78479782	Msa0377800:CDS	45.0%
	GCAGGAAAACAGATGAGACA+AGG	-	chr3_1:78479957-78479976	Msa0377800:CDS	45.0%
!	CAATTGGTGACACTCATTCC+TGG	-	chr3_1:78479996-78480015	Msa0377800:intron	45.0%
!	TAGCGGATGTTTGGTTATGC+GGG	+	chr3_1:78480516-78480535	None:intergenic	45.0%
!!	ACATGCACATAGCGGATGTT+TGG	+	chr3_1:78480525-78480544	None:intergenic	45.0%
	AAACACTATACCAGCTAGCG+CGG	+	chr3_1:78480793-78480812	None:intergenic	45.0%
!	GTTTGGTTGCTTTGCAACCT+TGG	+	chr3_1:78480901-78480920	None:intergenic	45.0%
	AGGTTGCAAAGCAACCAAAC+AGG	-	chr3_1:78480901-78480920	Msa0377800:intron	45.0%
	CATTTGTGGAGTTTGTAGGG+TGG	+	chr3_1:78480993-78481012	None:intergenic	45.0%
	CACCCTACAAACTCCACAAA+TGG	-	chr3_1:78480991-78481010	Msa0377800:intron	45.0%
!!!	TAGTAAAAAATATTTTTTAA+CGG	-	chr3_1:78480203-78480222	Msa0377800:intron	5.0%
!!!	TAGTAAAAAATATTTTTTAA+CGG	-	chr3_1:78480203-78480222	Msa0377800:intron	5.0%
	GGAGACCCATCAGAACAAAC+AGG	+	chr3_1:78479535-78479554	None:intergenic	50.0%
!	CATTCAGGTTCAGGGGAACA+TGG	-	chr3_1:78479667-78479686	Msa0377800:CDS	50.0%
	AGGGGAACATGGTTCATTGG+TGG	-	chr3_1:78479678-78479697	Msa0377800:CDS	50.0%
	CTTCTGACCGTACTTTCTCC+AGG	+	chr3_1:78480017-78480036	None:intergenic	50.0%
!	CTGGAGAAAGTACGGTCAGA+AGG	-	chr3_1:78480015-78480034	Msa0377800:intron	50.0%
	ACAAATTAACCCGCGCTAGC+TGG	-	chr3_1:78480780-78480799	Msa0377800:intron	50.0%
	AACACTATACCAGCTAGCGC+GGG	+	chr3_1:78480792-78480811	None:intergenic	50.0%
	TGCAACCTTGGTCATGCTTC+CGG	+	chr3_1:78480889-78480908	None:intergenic	50.0%
	GTCAGAACCTCCTTTGAGTG+AGG	+	chr3_1:78481067-78481086	None:intergenic	50.0%
	ACGACGACAATACTACTCCG+AGG	-	chr3_1:78481158-78481177	Msa0377800:CDS	50.0%
	GGAGACCCATCAGAACAAAC+AGG	+	chr3_1:78479535-78479554	None:intergenic	50.0%
!	CATTCAGGTTCAGGGGAACA+TGG	-	chr3_1:78479667-78479686	Msa0377800:CDS	50.0%
	AGGGGAACATGGTTCATTGG+TGG	-	chr3_1:78479678-78479697	Msa0377800:CDS	50.0%
	CTTCTGACCGTACTTTCTCC+AGG	+	chr3_1:78480017-78480036	None:intergenic	50.0%
!	CTGGAGAAAGTACGGTCAGA+AGG	-	chr3_1:78480015-78480034	Msa0377800:intron	50.0%
	ACAAATTAACCCGCGCTAGC+TGG	-	chr3_1:78480780-78480799	Msa0377800:intron	50.0%
	AACACTATACCAGCTAGCGC+GGG	+	chr3_1:78480792-78480811	None:intergenic	50.0%
	TGCAACCTTGGTCATGCTTC+CGG	+	chr3_1:78480889-78480908	None:intergenic	50.0%
	GTCAGAACCTCCTTTGAGTG+AGG	+	chr3_1:78481067-78481086	None:intergenic	50.0%
	ACGACGACAATACTACTCCG+AGG	-	chr3_1:78481158-78481177	Msa0377800:CDS	50.0%
	GGAGTTACTTCAGGTGCACC+CGG	-	chr3_1:78480867-78480886	Msa0377800:CDS	55.0%
	GCAACCTTGGTCATGCTTCC+GGG	+	chr3_1:78480888-78480907	None:intergenic	55.0%
	GGAGTTACTTCAGGTGCACC+CGG	-	chr3_1:78480867-78480886	Msa0377800:CDS	55.0%
	GCAACCTTGGTCATGCTTCC+GGG	+	chr3_1:78480888-78480907	None:intergenic	55.0%
!	TGCACCCGGAAGCATGACCA+AGG	-	chr3_1:78480881-78480900	Msa0377800:CDS	60.0%
!	TGCACCCGGAAGCATGACCA+AGG	-	chr3_1:78480881-78480900	Msa0377800:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_1	gene	78479239	78481625	78479239	ID=Msa0377800;Name=Msa0377800
chr3_1	mRNA	78479239	78481625	78479239	ID=Msa0377800-mRNA-1;Parent=Msa0377800;Name=Msa0377800-mRNA-1;_AED=0.00;_eAED=0.00;_QI=182\|1\|1\|1\|1\|1\|3\|265\|324
chr3_1	exon	78479239	78479996	78479239	ID=Msa0377800-mRNA-1:exon:18900;Parent=Msa0377800-mRNA-1
chr3_1	exon	78480802	78480903	78480802	ID=Msa0377800-mRNA-1:exon:18899;Parent=Msa0377800-mRNA-1
chr3_1	exon	78481064	78481625	78481064	ID=Msa0377800-mRNA-1:exon:18898;Parent=Msa0377800-mRNA-1
chr3_1	five_prime_UTR	78481444	78481625	78481444	ID=Msa0377800-mRNA-1:five_prime_utr;Parent=Msa0377800-mRNA-1
chr3_1	CDS	78481064	78481443	78481064	ID=Msa0377800-mRNA-1:cds;Parent=Msa0377800-mRNA-1
chr3_1	CDS	78480802	78480903	78480802	ID=Msa0377800-mRNA-1:cds;Parent=Msa0377800-mRNA-1
chr3_1	CDS	78479504	78479996	78479504	ID=Msa0377800-mRNA-1:cds;Parent=Msa0377800-mRNA-1
chr3_1	three_prime_UTR	78479239	78479503	78479239	ID=Msa0377800-mRNA-1:three_prime_utr;Parent=Msa0377800-mRNA-1

Gene Sequence

>Msa0377800

ATGAGTGTTATTTTACCTGAAACTGTCACTGCCAACAAAAAGAAGCTACTCATAAAAGAGCTTCTTCAGGGTAAAGAATATGCTACTCAGCTAAAACTTTTGCTTAAGAATCCTGTTTGTTCTGATGGGTCTCCTTCTGTTAAGGAATTGGTGGCTAATGTGTTGAGATCTTTCTCTGAGACTATTTCTGTGATGAATTCTACTGAAGATTGTAGTTTAGATGAGGTTGCTCAGAATCATGTGAATCATTCAGGTTCAGGGGAACATGGTTCATTGGTGGAAGTTTCTTGTAATGATGATTTGAAGTCTGAAGATACAAGTGAGAGTAAGAAGAGATTGTCGCCAACTACAAAGGATCGAAGAGGTTCCTACAAAAGAAGGAAAACAGATGAGACAAGGACCATAGTCTCTAAAACAATTGGTGACACTCATTCCTGGAGAAAGTACGGTCAGAAGGAAATCCTCAATTCTAATTTCCCAAGGAGTTACTTCAGGTGCACCCGGAAGCATGACCAAGGTTGCAAAGCAACCAAACAGGTACAATTGATAGAAGAGAATCCAGAAATGTACCAAATTACATACATTGGCTTTCACACATGCAAATCCACCCTACAAACTCCACAAATGGTCTCATTCTCTGAAGATACTAATTGGGATTCAATTCTTGTGAATTCTAATCCTCACTCAAAGGAGGTTCTGACAAATTATGATCAACAAGATTCACATGTTATTAGCTCAGAAAGGTCAATTGTGAAACAAGAATATCCCAACAACGACGACAATACTACTCCGAGGAGTGATGTTACTGACAACTTATTGGATCCTAATTTGTGGTCTGATTTTAAGGATTTTGAACTCTCCAAGGATATTGTGTATTCCTGCACTGAATCTCAAAATCTTGAAATTGATTTTGGGGTGTTTTCTTCTGATTTCAGCAATGATTTGATATATTTTGATGAAAGTCATTTGCTTTAA

Protein sequence

>Msa0377800

MSVILPETVTANKKKLLIKELLQGKEYATQLKLLLKNPVCSDGSPSVKELVANVLRSFSETISVMNSTEDCSLDEVAQNHVNHSGSGEHGSLVEVSCNDDLKSEDTSESKKRLSPTTKDRRGSYKRRKTDETRTIVSKTIGDTHSWRKYGQKEILNSNFPRSYFRCTRKHDQGCKATKQVQLIEENPEMYQITYIGFHTCKSTLQTPQMVSFSEDTNWDSILVNSNPHSKEVLTNYDQQDSHVISSERSIVKQEYPNNDDNTTPRSDVTDNLLDPNLWSDFKDFELSKDIVYSCTESQNLEIDFGVFSSDFSNDLIYFDESHLL*