Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416830 | XP_003600919.1 | 93.810 | 517 | 32 | 0 | 1 | 517 | 1 | 517 | 0.0 | 1015 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416830 | sp|Q93ZS9|C3H47_ARATH | 47.993 | 573 | 211 | 19 | 9 | 516 | 29 | 579 | 6.67e-154 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416830 | G7JBT0 | 93.810 | 517 | 32 | 0 | 1 | 517 | 1 | 517 | 0.0 | 1015 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0416830 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0416830 | Msa0463490 | 0.853676 | 2.041842e-61 | -8.615850e-47 |
| Msa0416830 | Msa0481740 | 0.801821 | 7.515067e-49 | -8.615850e-47 |
| Msa0416830 | Msa0858680 | 0.803510 | 3.368646e-49 | -8.615850e-47 |
| Msa0416830 | Msa1025750 | 0.839271 | 1.750745e-57 | -8.615850e-47 |
| Msa0416830 | Msa1064510 | 0.809500 | 1.835332e-50 | -8.615850e-47 |
| Msa0416830 | Msa1080650 | 0.806661 | 7.381090e-50 | -8.615850e-47 |
| Msa0416830 | Msa1126440 | 0.803820 | 2.905097e-49 | -8.615850e-47 |
| Msa0416830 | Msa1361710 | 0.813710 | 2.229608e-51 | -8.615850e-47 |
| Msa0246890 | Msa0416830 | 0.829404 | 5.246730e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416830 | MtrunA17_Chr3g0113651 | 93.810 | 517 | 32 | 0 | 1 | 517 | 1 | 517 | 0.0 | 1015 |
| Msa0416830 | MtrunA17_Chr5g0437251 | 60.199 | 402 | 91 | 7 | 1 | 336 | 16 | 414 | 5.47e-160 | 470 |
| Msa0416830 | MtrunA17_Chr5g0437251 | 51.037 | 241 | 90 | 9 | 298 | 515 | 439 | 674 | 7.22e-51 | 184 |
| Msa0416830 | MtrunA17_Chr1g0187591 | 43.841 | 552 | 213 | 17 | 2 | 463 | 25 | 569 | 1.14e-125 | 381 |
| Msa0416830 | MtrunA17_Chr5g0430211 | 44.875 | 439 | 156 | 7 | 8 | 369 | 33 | 462 | 4.24e-120 | 369 |
| Msa0416830 | MtrunA17_Chr5g0430211 | 32.870 | 216 | 120 | 9 | 322 | 515 | 483 | 695 | 6.48e-15 | 77.8 |
| Msa0416830 | MtrunA17_Chr7g0257831 | 41.410 | 454 | 153 | 9 | 10 | 360 | 47 | 490 | 1.29e-102 | 324 |
| Msa0416830 | MtrunA17_Chr3g0105101 | 42.787 | 409 | 140 | 12 | 13 | 362 | 28 | 401 | 1.65e-90 | 282 |
| Msa0416830 | MtrunA17_Chr3g0105131 | 38.610 | 518 | 188 | 16 | 26 | 464 | 33 | 499 | 2.12e-90 | 286 |
| Msa0416830 | MtrunA17_Chr1g0171151 | 41.791 | 335 | 127 | 5 | 10 | 280 | 31 | 361 | 1.04e-78 | 258 |
| Msa0416830 | MtrunA17_Chr3g0088521 | 37.500 | 472 | 156 | 17 | 138 | 492 | 241 | 690 | 3.36e-78 | 259 |
| Msa0416830 | MtrunA17_Chr3g0088521 | 43.860 | 114 | 64 | 0 | 8 | 121 | 43 | 156 | 5.60e-25 | 109 |
| Msa0416830 | MtrunA17_Chr3g0092171 | 43.464 | 306 | 134 | 5 | 8 | 274 | 81 | 386 | 1.05e-76 | 250 |
| Msa0416830 | MtrunA17_Chr3g0092221 | 49.020 | 204 | 88 | 2 | 149 | 340 | 144 | 343 | 1.91e-61 | 207 |
| Msa0416830 | MtrunA17_Chr3g0105141 | 67.176 | 131 | 40 | 2 | 140 | 269 | 15 | 143 | 6.34e-58 | 190 |
| Msa0416830 | MtrunA17_Chr3g0105121 | 36.631 | 374 | 160 | 16 | 162 | 483 | 8 | 356 | 1.81e-48 | 171 |
| Msa0416830 | MtrunA17_Chr3g0135351 | 53.247 | 154 | 58 | 3 | 153 | 305 | 43 | 183 | 5.36e-48 | 167 |
| Msa0416830 | MtrunA17_Chr6g0487481 | 62.963 | 108 | 40 | 0 | 158 | 265 | 98 | 205 | 2.52e-47 | 168 |
| Msa0416830 | MtrunA17_Chr8g0389561 | 57.377 | 122 | 52 | 0 | 159 | 280 | 77 | 198 | 3.73e-47 | 168 |
| Msa0416830 | MtrunA17_Chr2g0324781 | 58.559 | 111 | 46 | 0 | 163 | 273 | 77 | 187 | 9.00e-43 | 157 |
| Msa0416830 | MtrunA17_Chr4g0040391 | 58.879 | 107 | 44 | 0 | 159 | 265 | 56 | 162 | 1.86e-42 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416830 | AT3G55980.1 | 47.993 | 573 | 211 | 19 | 9 | 516 | 29 | 579 | 6.78e-155 | 454 |
| Msa0416830 | AT3G55980.2 | 47.818 | 573 | 212 | 18 | 9 | 516 | 96 | 646 | 1.19e-153 | 453 |
| Msa0416830 | AT2G40140.2 | 47.561 | 574 | 230 | 16 | 2 | 515 | 25 | 587 | 8.89e-153 | 449 |
| Msa0416830 | AT2G40140.1 | 47.561 | 574 | 230 | 16 | 2 | 515 | 25 | 587 | 8.89e-153 | 449 |
| Msa0416830 | AT5G58620.1 | 44.597 | 583 | 208 | 18 | 8 | 485 | 12 | 584 | 1.90e-144 | 428 |
| Msa0416830 | AT2G41900.1 | 43.349 | 436 | 151 | 11 | 10 | 352 | 48 | 480 | 7.05e-104 | 327 |
| Msa0416830 | AT5G12850.1 | 42.093 | 430 | 150 | 12 | 8 | 342 | 40 | 465 | 9.93e-104 | 327 |
| Msa0416830 | AT4G29190.1 | 49.718 | 177 | 77 | 3 | 136 | 300 | 52 | 228 | 1.60e-49 | 174 |
| Msa0416830 | AT2G19810.1 | 56.818 | 132 | 57 | 0 | 136 | 267 | 51 | 182 | 2.69e-49 | 174 |
| Msa0416830 | AT2G25900.2 | 62.500 | 112 | 42 | 0 | 159 | 270 | 86 | 197 | 8.39e-49 | 171 |
| Msa0416830 | AT2G25900.1 | 62.500 | 112 | 42 | 0 | 159 | 270 | 86 | 197 | 8.39e-49 | 171 |
| Msa0416830 | AT5G07500.1 | 56.098 | 123 | 54 | 0 | 143 | 265 | 32 | 154 | 6.73e-48 | 166 |
| Msa0416830 | AT1G03790.1 | 49.333 | 150 | 66 | 3 | 132 | 277 | 57 | 200 | 3.39e-41 | 152 |
| Msa0416830 | AT5G44260.1 | 51.880 | 133 | 57 | 2 | 139 | 270 | 42 | 168 | 9.44e-40 | 148 |
Find 109 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCTTAACAATCTCAAATT+TGG | 0.138458 | 3_2:-63869506 | None:intergenic |
| CTTGAACATGGTTCCTGTTT+TGG | 0.154085 | 3_2:-63870275 | None:intergenic |
| GACACGAAGCCAAAGCTTTA+TGG | 0.159998 | 3_2:+63870416 | Msa0416830:CDS |
| TCTGAGAATTCTGAGATATT+TGG | 0.200828 | 3_2:+63870663 | Msa0416830:CDS |
| CTTCTTTGTTTGGAAGCATT+AGG | 0.245406 | 3_2:+63869380 | Msa0416830:CDS |
| AATAATCAAGCAGAAAATTT+TGG | 0.246655 | 3_2:+63869567 | Msa0416830:CDS |
| CTTATGGTTGCTTCTTTGTT+TGG | 0.265933 | 3_2:+63869370 | Msa0416830:CDS |
| CAGATTGGATTTCAAATGAT+TGG | 0.284767 | 3_2:+63870505 | Msa0416830:CDS |
| CAGCTATAAGGATACTTCTT+TGG | 0.295350 | 3_2:-63869796 | None:intergenic |
| ATTCAAGTAAAACTGAGTTT+TGG | 0.311642 | 3_2:-63869216 | None:intergenic |
| TTCTTTGTTTGGAAGCATTA+GGG | 0.311661 | 3_2:+63869381 | Msa0416830:CDS |
| AAAACACCATTGTTTATATC+AGG | 0.317396 | 3_2:-63869655 | None:intergenic |
| CTCATAGATTGGAATTGATT+AGG | 0.322495 | 3_2:-63870237 | None:intergenic |
| TGAAAAGAGAACACCCCTTA+TGG | 0.338972 | 3_2:+63869354 | Msa0416830:CDS |
| GGTGTAGAAACATTTGAAAT+TGG | 0.340801 | 3_2:-63870045 | None:intergenic |
| ACTCACATGCATCTTTCTTC+TGG | 0.348032 | 3_2:-63869852 | None:intergenic |
| GCTTCTAATTCCTTTAAATC+AGG | 0.352563 | 3_2:-63869592 | None:intergenic |
| ATGTAAATGAGGCAGGTTAT+TGG | 0.356150 | 3_2:+63869296 | Msa0416830:CDS |
| GCATTACATTGTGCTGTTGC+TGG | 0.358959 | 3_2:+63869472 | Msa0416830:CDS |
| TCGATTCGGAAGCACCGATA+TGG | 0.364885 | 3_2:-63870458 | None:intergenic |
| CACGTGTAATTTCCATTCTT+AGG | 0.368515 | 3_2:-63870099 | None:intergenic |
| GAAGCTGAGAAGAAAGATTC+AGG | 0.379366 | 3_2:+63869610 | Msa0416830:CDS |
| AGGCCTTTGTATGCTTCTAC+TGG | 0.382036 | 3_2:+63869994 | Msa0416830:CDS |
| ATGAGAAAATCATCAGCATA+TGG | 0.391943 | 3_2:+63870333 | Msa0416830:CDS |
| GCATGTCCCTTTGCGAAACT+CGG | 0.397119 | 3_2:-63869830 | None:intergenic |
| GTTAAGCTCTTGCTTGATGC+TGG | 0.411467 | 3_2:+63869520 | Msa0416830:CDS |
| CAAAAGGGAAGTAGAAGAAA+AGG | 0.421816 | 3_2:+63869267 | Msa0416830:CDS |
| GCATTGACATACCATGTAAC+AGG | 0.426134 | 3_2:-63870203 | None:intergenic |
| GCATGTTGAGGCCGTGCAAC+GGG | 0.432944 | 3_2:-63870594 | None:intergenic |
| TGGAATTGATTAGGAGTTGA+AGG | 0.434731 | 3_2:-63870228 | None:intergenic |
| ATGATATTGAAGCATTCAAA+AGG | 0.436887 | 3_2:+63869251 | Msa0416830:CDS |
| CAAACAAAGAAGCAACCATA+AGG | 0.445004 | 3_2:-63869369 | None:intergenic |
| GCTGAAACCTACTCATAGAT+TGG | 0.445115 | 3_2:-63870248 | None:intergenic |
| GGGCACGGAACACAGCTATA+AGG | 0.448836 | 3_2:-63869808 | None:intergenic |
| CACCGCGATCCATAAAGCTT+TGG | 0.452463 | 3_2:-63870425 | None:intergenic |
| TTCTCCCCTGGATGAACAAA+TGG | 0.453606 | 3_2:-63869757 | None:intergenic |
| TGAACTCTGGTCTGTCAGAT+TGG | 0.454046 | 3_2:+63870490 | Msa0416830:CDS |
| GCTACAATTTGCTCTGTCCA+TGG | 0.454559 | 3_2:-63870729 | None:intergenic |
| CTGCAGCAGTGATGAATTCA+AGG | 0.455073 | 3_2:+63870379 | Msa0416830:CDS |
| AGATTGGATTTCAAATGATT+GGG | 0.455339 | 3_2:+63870506 | Msa0416830:CDS |
| CATGTCCCTTTGCGAAACTC+GGG | 0.458325 | 3_2:-63869829 | None:intergenic |
| AATCTCATCTTTACAAAGCC+TGG | 0.458636 | 3_2:-63869923 | None:intergenic |
| GGTTTCAGCAGAACCAAAAC+AGG | 0.464964 | 3_2:+63870262 | Msa0416830:CDS |
| GGCTTTGTAAAGATGAGATT+AGG | 0.465521 | 3_2:+63869926 | Msa0416830:CDS |
| AAAAGGGAAGTAGAAGAAAA+GGG | 0.470783 | 3_2:+63869268 | Msa0416830:CDS |
| GTTTGATTCATCAGCTGCTA+TGG | 0.471231 | 3_2:+63870356 | Msa0416830:CDS |
| GAGTGTCCATTTGTTCATCC+AGG | 0.473709 | 3_2:+63869751 | Msa0416830:CDS |
| AAACAAAGAAGCAACCATAA+GGG | 0.473747 | 3_2:-63869368 | None:intergenic |
| GCTGATTCATCTCCTAAGAA+TGG | 0.478855 | 3_2:+63870087 | Msa0416830:CDS |
| GTTCATCCTACTGTTCGATT+CGG | 0.479491 | 3_2:-63870472 | None:intergenic |
| TTCATCCAGGGGAGAATGCT+AGG | 0.479775 | 3_2:+63869764 | Msa0416830:CDS |
| GGTTATGATGTAAATGAGGC+AGG | 0.483515 | 3_2:+63869289 | Msa0416830:CDS |
| CTACAATTTGCTCTGTCCAT+GGG | 0.485011 | 3_2:-63870728 | None:intergenic |
| CTGCTTGATTATTTCATCAA+GGG | 0.490204 | 3_2:-63869557 | None:intergenic |
| TATGAAACAATGCTGTTGAA+TGG | 0.490726 | 3_2:-63870306 | None:intergenic |
| TCTGCTTGATTATTTCATCA+AGG | 0.491359 | 3_2:-63869558 | None:intergenic |
| GGCATGTTGAGGCCGTGCAA+CGG | 0.492495 | 3_2:-63870595 | None:intergenic |
| AAGGGATTTGTATCAAGAAA+TGG | 0.494896 | 3_2:+63870179 | Msa0416830:CDS |
| CAAGGGGTTACACTCATGAT+TGG | 0.497804 | 3_2:+63869725 | Msa0416830:CDS |
| GAATGAACCCACGAGACATC+TGG | 0.502120 | 3_2:-63870621 | None:intergenic |
| AACCCACGAGACATCTGGTT+CGG | 0.516681 | 3_2:-63870616 | None:intergenic |
| CAAGAAATGGACCTGTTACA+TGG | 0.528005 | 3_2:+63870192 | Msa0416830:CDS |
| TGATATTGAAGCATTCAAAA+GGG | 0.532093 | 3_2:+63869252 | Msa0416830:CDS |
| CTTCTCCTAGCATTCTCCCC+TGG | 0.532406 | 3_2:-63869769 | None:intergenic |
| ATTGGTAAAGATTCTTGTGA+AGG | 0.532807 | 3_2:-63870027 | None:intergenic |
| CTGCTGCTTCGCCCGTTGCA+CGG | 0.534070 | 3_2:+63870583 | Msa0416830:CDS |
| TACACCACCTATGTCTCCAT+TGG | 0.535040 | 3_2:+63870062 | Msa0416830:CDS |
| GTTAATGTGAACATGGCAAT+TGG | 0.535532 | 3_2:+63869433 | Msa0416830:CDS |
| TGAGAAAATCATCAGCATAT+GGG | 0.536370 | 3_2:+63870334 | Msa0416830:CDS |
| GGTTCATTCGCTTGTTCAAG+AGG | 0.536739 | 3_2:+63870635 | Msa0416830:CDS |
| CCGTGCCCCGAGTTTCGCAA+AGG | 0.542263 | 3_2:+63869823 | Msa0416830:CDS |
| CGTGCCCCGAGTTTCGCAAA+GGG | 0.545575 | 3_2:+63869824 | Msa0416830:CDS |
| CAAAGTGAAGACTTGCTCAA+GGG | 0.550348 | 3_2:+63869708 | Msa0416830:CDS |
| AAAGGGTTATGATGTAAATG+AGG | 0.551386 | 3_2:+63869285 | Msa0416830:CDS |
| AGTGTCCATTTGTTCATCCA+GGG | 0.552058 | 3_2:+63869752 | Msa0416830:CDS |
| TCAGCTACCAATGGAGACAT+AGG | 0.556570 | 3_2:-63870069 | None:intergenic |
| TCAAAGTGAAGACTTGCTCA+AGG | 0.569283 | 3_2:+63869707 | Msa0416830:CDS |
| ATCAATTCCAATCTATGAGT+AGG | 0.579232 | 3_2:+63870241 | Msa0416830:CDS |
| AGCCTGGTTCTGTATTGTGC+AGG | 0.587665 | 3_2:-63869907 | None:intergenic |
| CCTTTGCGAAACTCGGGGCA+CGG | 0.588011 | 3_2:-63869823 | None:intergenic |
| ATGCCGAACCAGATGTCTCG+TGG | 0.590815 | 3_2:+63870613 | Msa0416830:CDS |
| TTACATTGTGCTGTTGCTGG+TGG | 0.591769 | 3_2:+63869475 | Msa0416830:CDS |
| ATCCTGCACAATACAGAACC+AGG | 0.592720 | 3_2:+63869905 | Msa0416830:CDS |
| GGAGATGAATCAGCTACCAA+TGG | 0.593824 | 3_2:-63870078 | None:intergenic |
| AACAAAGAAGCAACCATAAG+GGG | 0.599426 | 3_2:-63869367 | None:intergenic |
| AAAGTGAAGACTTGCTCAAG+GGG | 0.602277 | 3_2:+63869709 | Msa0416830:CDS |
| CTGAGATATTTGGTGCTGAG+AGG | 0.605138 | 3_2:+63870673 | Msa0416830:CDS |
| ACATCTGGTTCGGCATGTTG+AGG | 0.605882 | 3_2:-63870606 | None:intergenic |
| AAACATGGTTAATGTGAACA+TGG | 0.608674 | 3_2:+63869426 | Msa0416830:CDS |
| ATGGATAACTTGCTTGAACA+TGG | 0.610654 | 3_2:-63870287 | None:intergenic |
| GTGCTTCCGAATCGAACAGT+AGG | 0.611938 | 3_2:+63870466 | Msa0416830:CDS |
| TTTGTTTGGAAGCATTAGGG+TGG | 0.614081 | 3_2:+63869384 | Msa0416830:CDS |
| CACACAAACATGAAGAGTTG+AGG | 0.614467 | 3_2:+63869974 | Msa0416830:CDS |
| TACAATTTGCTCTGTCCATG+GGG | 0.617465 | 3_2:-63870727 | None:intergenic |
| ATGTCCCTTTGCGAAACTCG+GGG | 0.621584 | 3_2:-63869828 | None:intergenic |
| TCATTGCCTGATATAAACAA+TGG | 0.636775 | 3_2:+63869649 | Msa0416830:CDS |
| TCGAACAGTAGGATGAACTC+TGG | 0.639055 | 3_2:+63870477 | Msa0416830:CDS |
| GTGTCCATTTGTTCATCCAG+GGG | 0.641621 | 3_2:+63869753 | Msa0416830:CDS |
| TGCCGAACCAGATGTCTCGT+GGG | 0.643543 | 3_2:+63870614 | Msa0416830:CDS |
| CTAAGAATGGAAATTACACG+TGG | 0.648009 | 3_2:+63870100 | Msa0416830:CDS |
| GGTGTGTCAAGACACCATAT+CGG | 0.652931 | 3_2:+63870444 | Msa0416830:CDS |
| AGCCAAAGCTTTATGGATCG+CGG | 0.654674 | 3_2:+63870423 | Msa0416830:CDS |
| GCTTTGGCTTCGTGTCACAA+AGG | 0.657576 | 3_2:-63870409 | None:intergenic |
| ATAAACAGAAGTTATCCCCA+TGG | 0.657774 | 3_2:+63870712 | Msa0416830:CDS |
| ATACATCATTGAAACAAACA+TGG | 0.679707 | 3_2:+63869411 | Msa0416830:CDS |
| GCTACCAATGGAGACATAGG+TGG | 0.695473 | 3_2:-63870066 | None:intergenic |
| GAACCAGTAGAAGCATACAA+AGG | 0.717416 | 3_2:-63869997 | None:intergenic |
| AAATATCTCAGAATTCTCAG+AGG | 0.724613 | 3_2:-63870661 | None:intergenic |
| GATGCATGTGAGTATTCACA+TGG | 0.742964 | 3_2:+63869862 | Msa0416830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTGGTATTTTAGAAAAAT+AGG | + | chr3_2:63869313-63869332 | Msa0416830:CDS | 15.0% |
| !!! | TTTTGGATTTAGAAATAATA+TGG | + | chr3_2:63870560-63870579 | Msa0416830:CDS | 15.0% |
| !!! | TATTGGTATTTTAGAAAAAT+AGG | + | chr3_2:63869313-63869332 | Msa0416830:CDS | 15.0% |
| !!! | TTTTGGATTTAGAAATAATA+TGG | + | chr3_2:63870560-63870579 | Msa0416830:CDS | 15.0% |
| !!! | AATAATCAAGCAGAAAATTT+TGG | + | chr3_2:63869567-63869586 | Msa0416830:CDS | 20.0% |
| !!! | AATAATCAAGCAGAAAATTT+TGG | + | chr3_2:63869567-63869586 | Msa0416830:CDS | 20.0% |
| !! | ATTCAAGTAAAACTGAGTTT+TGG | - | chr3_2:63869219-63869238 | None:intergenic | 25.0% |
| !! | ATGATATTGAAGCATTCAAA+AGG | + | chr3_2:63869251-63869270 | Msa0416830:CDS | 25.0% |
| !! | TGATATTGAAGCATTCAAAA+GGG | + | chr3_2:63869252-63869271 | Msa0416830:CDS | 25.0% |
| ! | ATACATCATTGAAACAAACA+TGG | + | chr3_2:63869411-63869430 | Msa0416830:CDS | 25.0% |
| ! | AAAACACCATTGTTTATATC+AGG | - | chr3_2:63869658-63869677 | None:intergenic | 25.0% |
| ! | AGATTGGATTTCAAATGATT+GGG | + | chr3_2:63870506-63870525 | Msa0416830:CDS | 25.0% |
| !! | TTGAAAAAATCTGCTTCTTT+TGG | + | chr3_2:63870543-63870562 | Msa0416830:CDS | 25.0% |
| !! | ATTCAAGTAAAACTGAGTTT+TGG | - | chr3_2:63869219-63869238 | None:intergenic | 25.0% |
| !! | ATGATATTGAAGCATTCAAA+AGG | + | chr3_2:63869251-63869270 | Msa0416830:CDS | 25.0% |
| !! | TGATATTGAAGCATTCAAAA+GGG | + | chr3_2:63869252-63869271 | Msa0416830:CDS | 25.0% |
| ! | ATACATCATTGAAACAAACA+TGG | + | chr3_2:63869411-63869430 | Msa0416830:CDS | 25.0% |
| ! | AAAACACCATTGTTTATATC+AGG | - | chr3_2:63869658-63869677 | None:intergenic | 25.0% |
| ! | AGATTGGATTTCAAATGATT+GGG | + | chr3_2:63870506-63870525 | Msa0416830:CDS | 25.0% |
| !! | TTGAAAAAATCTGCTTCTTT+TGG | + | chr3_2:63870543-63870562 | Msa0416830:CDS | 25.0% |
| AAAAGGGAAGTAGAAGAAAA+GGG | + | chr3_2:63869268-63869287 | Msa0416830:CDS | 30.0% | |
| AAAGGGTTATGATGTAAATG+AGG | + | chr3_2:63869285-63869304 | Msa0416830:CDS | 30.0% | |
| AAACAAAGAAGCAACCATAA+GGG | - | chr3_2:63869371-63869390 | None:intergenic | 30.0% | |
| !! | TTCTTTGTTTGGAAGCATTA+GGG | + | chr3_2:63869381-63869400 | Msa0416830:CDS | 30.0% |
| AAACATGGTTAATGTGAACA+TGG | + | chr3_2:63869426-63869445 | Msa0416830:CDS | 30.0% | |
| GAGCTTAACAATCTCAAATT+TGG | - | chr3_2:63869509-63869528 | None:intergenic | 30.0% | |
| CTGCTTGATTATTTCATCAA+GGG | - | chr3_2:63869560-63869579 | None:intergenic | 30.0% | |
| TCTGCTTGATTATTTCATCA+AGG | - | chr3_2:63869561-63869580 | None:intergenic | 30.0% | |
| !!! | AATTTTGGTGCCTGATTTAA+AGG | + | chr3_2:63869582-63869601 | Msa0416830:CDS | 30.0% |
| GCTTCTAATTCCTTTAAATC+AGG | - | chr3_2:63869595-63869614 | None:intergenic | 30.0% | |
| TCATTGCCTGATATAAACAA+TGG | + | chr3_2:63869649-63869668 | Msa0416830:CDS | 30.0% | |
| ATTGGTAAAGATTCTTGTGA+AGG | - | chr3_2:63870030-63870049 | None:intergenic | 30.0% | |
| ! | GGTGTAGAAACATTTGAAAT+TGG | - | chr3_2:63870048-63870067 | None:intergenic | 30.0% |
| TGAAAAATTCTTTGAGTGCA+AGG | + | chr3_2:63870160-63870179 | Msa0416830:CDS | 30.0% | |
| GAAAAATTCTTTGAGTGCAA+GGG | + | chr3_2:63870161-63870180 | Msa0416830:CDS | 30.0% | |
| AAGGGATTTGTATCAAGAAA+TGG | + | chr3_2:63870179-63870198 | Msa0416830:CDS | 30.0% | |
| CTCATAGATTGGAATTGATT+AGG | - | chr3_2:63870240-63870259 | None:intergenic | 30.0% | |
| ATCAATTCCAATCTATGAGT+AGG | + | chr3_2:63870241-63870260 | Msa0416830:CDS | 30.0% | |
| TATGAAACAATGCTGTTGAA+TGG | - | chr3_2:63870309-63870328 | None:intergenic | 30.0% | |
| ! | TATGCTGATGATTTTCTCAT+AGG | - | chr3_2:63870333-63870352 | None:intergenic | 30.0% |
| ATGAGAAAATCATCAGCATA+TGG | + | chr3_2:63870333-63870352 | Msa0416830:CDS | 30.0% | |
| TGAGAAAATCATCAGCATAT+GGG | + | chr3_2:63870334-63870353 | Msa0416830:CDS | 30.0% | |
| CAGATTGGATTTCAAATGAT+TGG | + | chr3_2:63870505-63870524 | Msa0416830:CDS | 30.0% | |
| AAATATCTCAGAATTCTCAG+AGG | - | chr3_2:63870664-63870683 | None:intergenic | 30.0% | |
| !! | TCTGAGAATTCTGAGATATT+TGG | + | chr3_2:63870663-63870682 | Msa0416830:CDS | 30.0% |
| AAAAGGGAAGTAGAAGAAAA+GGG | + | chr3_2:63869268-63869287 | Msa0416830:CDS | 30.0% | |
| AAAGGGTTATGATGTAAATG+AGG | + | chr3_2:63869285-63869304 | Msa0416830:CDS | 30.0% | |
| AAACAAAGAAGCAACCATAA+GGG | - | chr3_2:63869371-63869390 | None:intergenic | 30.0% | |
| !! | TTCTTTGTTTGGAAGCATTA+GGG | + | chr3_2:63869381-63869400 | Msa0416830:CDS | 30.0% |
| AAACATGGTTAATGTGAACA+TGG | + | chr3_2:63869426-63869445 | Msa0416830:CDS | 30.0% | |
| GAGCTTAACAATCTCAAATT+TGG | - | chr3_2:63869509-63869528 | None:intergenic | 30.0% | |
| CTGCTTGATTATTTCATCAA+GGG | - | chr3_2:63869560-63869579 | None:intergenic | 30.0% | |
| TCTGCTTGATTATTTCATCA+AGG | - | chr3_2:63869561-63869580 | None:intergenic | 30.0% | |
| !!! | AATTTTGGTGCCTGATTTAA+AGG | + | chr3_2:63869582-63869601 | Msa0416830:CDS | 30.0% |
| GCTTCTAATTCCTTTAAATC+AGG | - | chr3_2:63869595-63869614 | None:intergenic | 30.0% | |
| TCATTGCCTGATATAAACAA+TGG | + | chr3_2:63869649-63869668 | Msa0416830:CDS | 30.0% | |
| ATTGGTAAAGATTCTTGTGA+AGG | - | chr3_2:63870030-63870049 | None:intergenic | 30.0% | |
| ! | GGTGTAGAAACATTTGAAAT+TGG | - | chr3_2:63870048-63870067 | None:intergenic | 30.0% |
| TGAAAAATTCTTTGAGTGCA+AGG | + | chr3_2:63870160-63870179 | Msa0416830:CDS | 30.0% | |
| GAAAAATTCTTTGAGTGCAA+GGG | + | chr3_2:63870161-63870180 | Msa0416830:CDS | 30.0% | |
| AAGGGATTTGTATCAAGAAA+TGG | + | chr3_2:63870179-63870198 | Msa0416830:CDS | 30.0% | |
| CTCATAGATTGGAATTGATT+AGG | - | chr3_2:63870240-63870259 | None:intergenic | 30.0% | |
| ATCAATTCCAATCTATGAGT+AGG | + | chr3_2:63870241-63870260 | Msa0416830:CDS | 30.0% | |
| TATGAAACAATGCTGTTGAA+TGG | - | chr3_2:63870309-63870328 | None:intergenic | 30.0% | |
| ! | TATGCTGATGATTTTCTCAT+AGG | - | chr3_2:63870333-63870352 | None:intergenic | 30.0% |
| ATGAGAAAATCATCAGCATA+TGG | + | chr3_2:63870333-63870352 | Msa0416830:CDS | 30.0% | |
| TGAGAAAATCATCAGCATAT+GGG | + | chr3_2:63870334-63870353 | Msa0416830:CDS | 30.0% | |
| CAGATTGGATTTCAAATGAT+TGG | + | chr3_2:63870505-63870524 | Msa0416830:CDS | 30.0% | |
| AAATATCTCAGAATTCTCAG+AGG | - | chr3_2:63870664-63870683 | None:intergenic | 30.0% | |
| !! | TCTGAGAATTCTGAGATATT+TGG | + | chr3_2:63870663-63870682 | Msa0416830:CDS | 30.0% |
| CAAAAGGGAAGTAGAAGAAA+AGG | + | chr3_2:63869267-63869286 | Msa0416830:CDS | 35.0% | |
| ATGTAAATGAGGCAGGTTAT+TGG | + | chr3_2:63869296-63869315 | Msa0416830:CDS | 35.0% | |
| AACAAAGAAGCAACCATAAG+GGG | - | chr3_2:63869370-63869389 | None:intergenic | 35.0% | |
| CAAACAAAGAAGCAACCATA+AGG | - | chr3_2:63869372-63869391 | None:intergenic | 35.0% | |
| CTTATGGTTGCTTCTTTGTT+TGG | + | chr3_2:63869370-63869389 | Msa0416830:CDS | 35.0% | |
| !! | CTTCTTTGTTTGGAAGCATT+AGG | + | chr3_2:63869380-63869399 | Msa0416830:CDS | 35.0% |
| GTTAATGTGAACATGGCAAT+TGG | + | chr3_2:63869433-63869452 | Msa0416830:CDS | 35.0% | |
| CAGCTATAAGGATACTTCTT+TGG | - | chr3_2:63869799-63869818 | None:intergenic | 35.0% | |
| AATCTCATCTTTACAAAGCC+TGG | - | chr3_2:63869926-63869945 | None:intergenic | 35.0% | |
| ! | GGCTTTGTAAAGATGAGATT+AGG | + | chr3_2:63869926-63869945 | Msa0416830:CDS | 35.0% |
| CACGTGTAATTTCCATTCTT+AGG | - | chr3_2:63870102-63870121 | None:intergenic | 35.0% | |
| CTAAGAATGGAAATTACACG+TGG | + | chr3_2:63870100-63870119 | Msa0416830:CDS | 35.0% | |
| !! | GAATTTTTCAGCTGCAATGA+AGG | - | chr3_2:63870150-63870169 | None:intergenic | 35.0% |
| TGGAATTGATTAGGAGTTGA+AGG | - | chr3_2:63870231-63870250 | None:intergenic | 35.0% | |
| !! | ATGGATAACTTGCTTGAACA+TGG | - | chr3_2:63870290-63870309 | None:intergenic | 35.0% |
| ATAAACAGAAGTTATCCCCA+TGG | + | chr3_2:63870712-63870731 | Msa0416830:CDS | 35.0% | |
| CAAAAGGGAAGTAGAAGAAA+AGG | + | chr3_2:63869267-63869286 | Msa0416830:CDS | 35.0% | |
| ATGTAAATGAGGCAGGTTAT+TGG | + | chr3_2:63869296-63869315 | Msa0416830:CDS | 35.0% | |
| AACAAAGAAGCAACCATAAG+GGG | - | chr3_2:63869370-63869389 | None:intergenic | 35.0% | |
| CAAACAAAGAAGCAACCATA+AGG | - | chr3_2:63869372-63869391 | None:intergenic | 35.0% | |
| CTTATGGTTGCTTCTTTGTT+TGG | + | chr3_2:63869370-63869389 | Msa0416830:CDS | 35.0% | |
| !! | CTTCTTTGTTTGGAAGCATT+AGG | + | chr3_2:63869380-63869399 | Msa0416830:CDS | 35.0% |
| GTTAATGTGAACATGGCAAT+TGG | + | chr3_2:63869433-63869452 | Msa0416830:CDS | 35.0% | |
| CAGCTATAAGGATACTTCTT+TGG | - | chr3_2:63869799-63869818 | None:intergenic | 35.0% | |
| AATCTCATCTTTACAAAGCC+TGG | - | chr3_2:63869926-63869945 | None:intergenic | 35.0% | |
| ! | GGCTTTGTAAAGATGAGATT+AGG | + | chr3_2:63869926-63869945 | Msa0416830:CDS | 35.0% |
| CACGTGTAATTTCCATTCTT+AGG | - | chr3_2:63870102-63870121 | None:intergenic | 35.0% | |
| CTAAGAATGGAAATTACACG+TGG | + | chr3_2:63870100-63870119 | Msa0416830:CDS | 35.0% | |
| !! | GAATTTTTCAGCTGCAATGA+AGG | - | chr3_2:63870150-63870169 | None:intergenic | 35.0% |
| TGGAATTGATTAGGAGTTGA+AGG | - | chr3_2:63870231-63870250 | None:intergenic | 35.0% | |
| !! | ATGGATAACTTGCTTGAACA+TGG | - | chr3_2:63870290-63870309 | None:intergenic | 35.0% |
| ATAAACAGAAGTTATCCCCA+TGG | + | chr3_2:63870712-63870731 | Msa0416830:CDS | 35.0% | |
| GGTTATGATGTAAATGAGGC+AGG | + | chr3_2:63869289-63869308 | Msa0416830:CDS | 40.0% | |
| TGAAAAGAGAACACCCCTTA+TGG | + | chr3_2:63869354-63869373 | Msa0416830:CDS | 40.0% | |
| !! | TTTGTTTGGAAGCATTAGGG+TGG | + | chr3_2:63869384-63869403 | Msa0416830:CDS | 40.0% |
| GAAGCTGAGAAGAAAGATTC+AGG | + | chr3_2:63869610-63869629 | Msa0416830:CDS | 40.0% | |
| ! | TCAAAGTGAAGACTTGCTCA+AGG | + | chr3_2:63869707-63869726 | Msa0416830:CDS | 40.0% |
| ! | CAAAGTGAAGACTTGCTCAA+GGG | + | chr3_2:63869708-63869727 | Msa0416830:CDS | 40.0% |
| ! | AAAGTGAAGACTTGCTCAAG+GGG | + | chr3_2:63869709-63869728 | Msa0416830:CDS | 40.0% |
| AGTGTCCATTTGTTCATCCA+GGG | + | chr3_2:63869752-63869771 | Msa0416830:CDS | 40.0% | |
| ACTCACATGCATCTTTCTTC+TGG | - | chr3_2:63869855-63869874 | None:intergenic | 40.0% | |
| GATGCATGTGAGTATTCACA+TGG | + | chr3_2:63869862-63869881 | Msa0416830:CDS | 40.0% | |
| CACACAAACATGAAGAGTTG+AGG | + | chr3_2:63869974-63869993 | Msa0416830:CDS | 40.0% | |
| ! | GAACCAGTAGAAGCATACAA+AGG | - | chr3_2:63870000-63870019 | None:intergenic | 40.0% |
| ! | GCTGATTCATCTCCTAAGAA+TGG | + | chr3_2:63870087-63870106 | Msa0416830:CDS | 40.0% |
| !! | TTTTTCAGCTGCAATGAAGG+TGG | - | chr3_2:63870147-63870166 | None:intergenic | 40.0% |
| CAAGAAATGGACCTGTTACA+TGG | + | chr3_2:63870192-63870211 | Msa0416830:CDS | 40.0% | |
| ! | GCATTGACATACCATGTAAC+AGG | - | chr3_2:63870206-63870225 | None:intergenic | 40.0% |
| GCTGAAACCTACTCATAGAT+TGG | - | chr3_2:63870251-63870270 | None:intergenic | 40.0% | |
| ! | CTTGAACATGGTTCCTGTTT+TGG | - | chr3_2:63870278-63870297 | None:intergenic | 40.0% |
| GTTTGATTCATCAGCTGCTA+TGG | + | chr3_2:63870356-63870375 | Msa0416830:CDS | 40.0% | |
| GTTCATCCTACTGTTCGATT+CGG | - | chr3_2:63870475-63870494 | None:intergenic | 40.0% | |
| ! | TACAATTTGCTCTGTCCATG+GGG | - | chr3_2:63870730-63870749 | None:intergenic | 40.0% |
| ! | CTACAATTTGCTCTGTCCAT+GGG | - | chr3_2:63870731-63870750 | None:intergenic | 40.0% |
| GGTTATGATGTAAATGAGGC+AGG | + | chr3_2:63869289-63869308 | Msa0416830:CDS | 40.0% | |
| TGAAAAGAGAACACCCCTTA+TGG | + | chr3_2:63869354-63869373 | Msa0416830:CDS | 40.0% | |
| !! | TTTGTTTGGAAGCATTAGGG+TGG | + | chr3_2:63869384-63869403 | Msa0416830:CDS | 40.0% |
| GAAGCTGAGAAGAAAGATTC+AGG | + | chr3_2:63869610-63869629 | Msa0416830:CDS | 40.0% | |
| ! | TCAAAGTGAAGACTTGCTCA+AGG | + | chr3_2:63869707-63869726 | Msa0416830:CDS | 40.0% |
| ! | CAAAGTGAAGACTTGCTCAA+GGG | + | chr3_2:63869708-63869727 | Msa0416830:CDS | 40.0% |
| ! | AAAGTGAAGACTTGCTCAAG+GGG | + | chr3_2:63869709-63869728 | Msa0416830:CDS | 40.0% |
| AGTGTCCATTTGTTCATCCA+GGG | + | chr3_2:63869752-63869771 | Msa0416830:CDS | 40.0% | |
| ACTCACATGCATCTTTCTTC+TGG | - | chr3_2:63869855-63869874 | None:intergenic | 40.0% | |
| GATGCATGTGAGTATTCACA+TGG | + | chr3_2:63869862-63869881 | Msa0416830:CDS | 40.0% | |
| CACACAAACATGAAGAGTTG+AGG | + | chr3_2:63869974-63869993 | Msa0416830:CDS | 40.0% | |
| ! | GAACCAGTAGAAGCATACAA+AGG | - | chr3_2:63870000-63870019 | None:intergenic | 40.0% |
| ! | GCTGATTCATCTCCTAAGAA+TGG | + | chr3_2:63870087-63870106 | Msa0416830:CDS | 40.0% |
| !! | TTTTTCAGCTGCAATGAAGG+TGG | - | chr3_2:63870147-63870166 | None:intergenic | 40.0% |
| CAAGAAATGGACCTGTTACA+TGG | + | chr3_2:63870192-63870211 | Msa0416830:CDS | 40.0% | |
| ! | GCATTGACATACCATGTAAC+AGG | - | chr3_2:63870206-63870225 | None:intergenic | 40.0% |
| GCTGAAACCTACTCATAGAT+TGG | - | chr3_2:63870251-63870270 | None:intergenic | 40.0% | |
| ! | CTTGAACATGGTTCCTGTTT+TGG | - | chr3_2:63870278-63870297 | None:intergenic | 40.0% |
| GTTTGATTCATCAGCTGCTA+TGG | + | chr3_2:63870356-63870375 | Msa0416830:CDS | 40.0% | |
| GTTCATCCTACTGTTCGATT+CGG | - | chr3_2:63870475-63870494 | None:intergenic | 40.0% | |
| ! | TACAATTTGCTCTGTCCATG+GGG | - | chr3_2:63870730-63870749 | None:intergenic | 40.0% |
| ! | CTACAATTTGCTCTGTCCAT+GGG | - | chr3_2:63870731-63870750 | None:intergenic | 40.0% |
| ! | GCATTACATTGTGCTGTTGC+TGG | + | chr3_2:63869472-63869491 | Msa0416830:CDS | 45.0% |
| ! | TTACATTGTGCTGTTGCTGG+TGG | + | chr3_2:63869475-63869494 | Msa0416830:CDS | 45.0% |
| GTTAAGCTCTTGCTTGATGC+TGG | + | chr3_2:63869520-63869539 | Msa0416830:CDS | 45.0% | |
| CAAGGGGTTACACTCATGAT+TGG | + | chr3_2:63869725-63869744 | Msa0416830:CDS | 45.0% | |
| GAGTGTCCATTTGTTCATCC+AGG | + | chr3_2:63869751-63869770 | Msa0416830:CDS | 45.0% | |
| GTGTCCATTTGTTCATCCAG+GGG | + | chr3_2:63869753-63869772 | Msa0416830:CDS | 45.0% | |
| TTCTCCCCTGGATGAACAAA+TGG | - | chr3_2:63869760-63869779 | None:intergenic | 45.0% | |
| ATCCTGCACAATACAGAACC+AGG | + | chr3_2:63869905-63869924 | Msa0416830:CDS | 45.0% | |
| AGGCCTTTGTATGCTTCTAC+TGG | + | chr3_2:63869994-63870013 | Msa0416830:CDS | 45.0% | |
| TACACCACCTATGTCTCCAT+TGG | + | chr3_2:63870062-63870081 | Msa0416830:CDS | 45.0% | |
| TCAGCTACCAATGGAGACAT+AGG | - | chr3_2:63870072-63870091 | None:intergenic | 45.0% | |
| GGAGATGAATCAGCTACCAA+TGG | - | chr3_2:63870081-63870100 | None:intergenic | 45.0% | |
| GGTTTCAGCAGAACCAAAAC+AGG | + | chr3_2:63870262-63870281 | Msa0416830:CDS | 45.0% | |
| CTGCAGCAGTGATGAATTCA+AGG | + | chr3_2:63870379-63870398 | Msa0416830:CDS | 45.0% | |
| GACACGAAGCCAAAGCTTTA+TGG | + | chr3_2:63870416-63870435 | Msa0416830:CDS | 45.0% | |
| ! | AGCCAAAGCTTTATGGATCG+CGG | + | chr3_2:63870423-63870442 | Msa0416830:CDS | 45.0% |
| GGTGTGTCAAGACACCATAT+CGG | + | chr3_2:63870444-63870463 | Msa0416830:CDS | 45.0% | |
| TCGAACAGTAGGATGAACTC+TGG | + | chr3_2:63870477-63870496 | Msa0416830:CDS | 45.0% | |
| TGAACTCTGGTCTGTCAGAT+TGG | + | chr3_2:63870490-63870509 | Msa0416830:CDS | 45.0% | |
| GGTTCATTCGCTTGTTCAAG+AGG | + | chr3_2:63870635-63870654 | Msa0416830:CDS | 45.0% | |
| !! | CTGAGATATTTGGTGCTGAG+AGG | + | chr3_2:63870673-63870692 | Msa0416830:CDS | 45.0% |
| ! | GCTACAATTTGCTCTGTCCA+TGG | - | chr3_2:63870732-63870751 | None:intergenic | 45.0% |
| ! | GCATTACATTGTGCTGTTGC+TGG | + | chr3_2:63869472-63869491 | Msa0416830:CDS | 45.0% |
| ! | TTACATTGTGCTGTTGCTGG+TGG | + | chr3_2:63869475-63869494 | Msa0416830:CDS | 45.0% |
| GTTAAGCTCTTGCTTGATGC+TGG | + | chr3_2:63869520-63869539 | Msa0416830:CDS | 45.0% | |
| CAAGGGGTTACACTCATGAT+TGG | + | chr3_2:63869725-63869744 | Msa0416830:CDS | 45.0% | |
| GAGTGTCCATTTGTTCATCC+AGG | + | chr3_2:63869751-63869770 | Msa0416830:CDS | 45.0% | |
| GTGTCCATTTGTTCATCCAG+GGG | + | chr3_2:63869753-63869772 | Msa0416830:CDS | 45.0% | |
| TTCTCCCCTGGATGAACAAA+TGG | - | chr3_2:63869760-63869779 | None:intergenic | 45.0% | |
| ATCCTGCACAATACAGAACC+AGG | + | chr3_2:63869905-63869924 | Msa0416830:CDS | 45.0% | |
| AGGCCTTTGTATGCTTCTAC+TGG | + | chr3_2:63869994-63870013 | Msa0416830:CDS | 45.0% | |
| TACACCACCTATGTCTCCAT+TGG | + | chr3_2:63870062-63870081 | Msa0416830:CDS | 45.0% | |
| TCAGCTACCAATGGAGACAT+AGG | - | chr3_2:63870072-63870091 | None:intergenic | 45.0% | |
| GGAGATGAATCAGCTACCAA+TGG | - | chr3_2:63870081-63870100 | None:intergenic | 45.0% | |
| GGTTTCAGCAGAACCAAAAC+AGG | + | chr3_2:63870262-63870281 | Msa0416830:CDS | 45.0% | |
| CTGCAGCAGTGATGAATTCA+AGG | + | chr3_2:63870379-63870398 | Msa0416830:CDS | 45.0% | |
| GACACGAAGCCAAAGCTTTA+TGG | + | chr3_2:63870416-63870435 | Msa0416830:CDS | 45.0% | |
| ! | AGCCAAAGCTTTATGGATCG+CGG | + | chr3_2:63870423-63870442 | Msa0416830:CDS | 45.0% |
| GGTGTGTCAAGACACCATAT+CGG | + | chr3_2:63870444-63870463 | Msa0416830:CDS | 45.0% | |
| TCGAACAGTAGGATGAACTC+TGG | + | chr3_2:63870477-63870496 | Msa0416830:CDS | 45.0% | |
| TGAACTCTGGTCTGTCAGAT+TGG | + | chr3_2:63870490-63870509 | Msa0416830:CDS | 45.0% | |
| GGTTCATTCGCTTGTTCAAG+AGG | + | chr3_2:63870635-63870654 | Msa0416830:CDS | 45.0% | |
| !! | CTGAGATATTTGGTGCTGAG+AGG | + | chr3_2:63870673-63870692 | Msa0416830:CDS | 45.0% |
| ! | GCTACAATTTGCTCTGTCCA+TGG | - | chr3_2:63870732-63870751 | None:intergenic | 45.0% |
| TTCATCCAGGGGAGAATGCT+AGG | + | chr3_2:63869764-63869783 | Msa0416830:CDS | 50.0% | |
| ATGTCCCTTTGCGAAACTCG+GGG | - | chr3_2:63869831-63869850 | None:intergenic | 50.0% | |
| CATGTCCCTTTGCGAAACTC+GGG | - | chr3_2:63869832-63869851 | None:intergenic | 50.0% | |
| GCATGTCCCTTTGCGAAACT+CGG | - | chr3_2:63869833-63869852 | None:intergenic | 50.0% | |
| !! | AGCCTGGTTCTGTATTGTGC+AGG | - | chr3_2:63869910-63869929 | None:intergenic | 50.0% |
| GCTACCAATGGAGACATAGG+TGG | - | chr3_2:63870069-63870088 | None:intergenic | 50.0% | |
| ! | GCTTTGGCTTCGTGTCACAA+AGG | - | chr3_2:63870412-63870431 | None:intergenic | 50.0% |
| CACCGCGATCCATAAAGCTT+TGG | - | chr3_2:63870428-63870447 | None:intergenic | 50.0% | |
| !! | TCGATTCGGAAGCACCGATA+TGG | - | chr3_2:63870461-63870480 | None:intergenic | 50.0% |
| GTGCTTCCGAATCGAACAGT+AGG | + | chr3_2:63870466-63870485 | Msa0416830:CDS | 50.0% | |
| !! | ACATCTGGTTCGGCATGTTG+AGG | - | chr3_2:63870609-63870628 | None:intergenic | 50.0% |
| AACCCACGAGACATCTGGTT+CGG | - | chr3_2:63870619-63870638 | None:intergenic | 50.0% | |
| GAATGAACCCACGAGACATC+TGG | - | chr3_2:63870624-63870643 | None:intergenic | 50.0% | |
| TTCATCCAGGGGAGAATGCT+AGG | + | chr3_2:63869764-63869783 | Msa0416830:CDS | 50.0% | |
| ATGTCCCTTTGCGAAACTCG+GGG | - | chr3_2:63869831-63869850 | None:intergenic | 50.0% | |
| CATGTCCCTTTGCGAAACTC+GGG | - | chr3_2:63869832-63869851 | None:intergenic | 50.0% | |
| GCATGTCCCTTTGCGAAACT+CGG | - | chr3_2:63869833-63869852 | None:intergenic | 50.0% | |
| !! | AGCCTGGTTCTGTATTGTGC+AGG | - | chr3_2:63869910-63869929 | None:intergenic | 50.0% |
| GCTACCAATGGAGACATAGG+TGG | - | chr3_2:63870069-63870088 | None:intergenic | 50.0% | |
| ! | GCTTTGGCTTCGTGTCACAA+AGG | - | chr3_2:63870412-63870431 | None:intergenic | 50.0% |
| CACCGCGATCCATAAAGCTT+TGG | - | chr3_2:63870428-63870447 | None:intergenic | 50.0% | |
| !! | TCGATTCGGAAGCACCGATA+TGG | - | chr3_2:63870461-63870480 | None:intergenic | 50.0% |
| GTGCTTCCGAATCGAACAGT+AGG | + | chr3_2:63870466-63870485 | Msa0416830:CDS | 50.0% | |
| !! | ACATCTGGTTCGGCATGTTG+AGG | - | chr3_2:63870609-63870628 | None:intergenic | 50.0% |
| AACCCACGAGACATCTGGTT+CGG | - | chr3_2:63870619-63870638 | None:intergenic | 50.0% | |
| GAATGAACCCACGAGACATC+TGG | - | chr3_2:63870624-63870643 | None:intergenic | 50.0% | |
| CTTCTCCTAGCATTCTCCCC+TGG | - | chr3_2:63869772-63869791 | None:intergenic | 55.0% | |
| GGGCACGGAACACAGCTATA+AGG | - | chr3_2:63869811-63869830 | None:intergenic | 55.0% | |
| ATGCCGAACCAGATGTCTCG+TGG | + | chr3_2:63870613-63870632 | Msa0416830:CDS | 55.0% | |
| TGCCGAACCAGATGTCTCGT+GGG | + | chr3_2:63870614-63870633 | Msa0416830:CDS | 55.0% | |
| CTTCTCCTAGCATTCTCCCC+TGG | - | chr3_2:63869772-63869791 | None:intergenic | 55.0% | |
| GGGCACGGAACACAGCTATA+AGG | - | chr3_2:63869811-63869830 | None:intergenic | 55.0% | |
| ATGCCGAACCAGATGTCTCG+TGG | + | chr3_2:63870613-63870632 | Msa0416830:CDS | 55.0% | |
| TGCCGAACCAGATGTCTCGT+GGG | + | chr3_2:63870614-63870633 | Msa0416830:CDS | 55.0% | |
| CCTTTGCGAAACTCGGGGCA+CGG | - | chr3_2:63869826-63869845 | None:intergenic | 60.0% | |
| CGTGCCCCGAGTTTCGCAAA+GGG | + | chr3_2:63869824-63869843 | Msa0416830:CDS | 60.0% | |
| GCATGTTGAGGCCGTGCAAC+GGG | - | chr3_2:63870597-63870616 | None:intergenic | 60.0% | |
| GGCATGTTGAGGCCGTGCAA+CGG | - | chr3_2:63870598-63870617 | None:intergenic | 60.0% | |
| CCTTTGCGAAACTCGGGGCA+CGG | - | chr3_2:63869826-63869845 | None:intergenic | 60.0% | |
| CGTGCCCCGAGTTTCGCAAA+GGG | + | chr3_2:63869824-63869843 | Msa0416830:CDS | 60.0% | |
| GCATGTTGAGGCCGTGCAAC+GGG | - | chr3_2:63870597-63870616 | None:intergenic | 60.0% | |
| GGCATGTTGAGGCCGTGCAA+CGG | - | chr3_2:63870598-63870617 | None:intergenic | 60.0% | |
| CCGTGCCCCGAGTTTCGCAA+AGG | + | chr3_2:63869823-63869842 | Msa0416830:CDS | 65.0% | |
| ! | CTGCTGCTTCGCCCGTTGCA+CGG | + | chr3_2:63870583-63870602 | Msa0416830:CDS | 65.0% |
| CCGTGCCCCGAGTTTCGCAA+AGG | + | chr3_2:63869823-63869842 | Msa0416830:CDS | 65.0% | |
| ! | CTGCTGCTTCGCCCGTTGCA+CGG | + | chr3_2:63870583-63870602 | Msa0416830:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 63869202 | 63870755 | 63869202 | ID=Msa0416830;Name=Msa0416830 |
| chr3_2 | mRNA | 63869202 | 63870755 | 63869202 | ID=Msa0416830-mRNA-1;Parent=Msa0416830;Name=Msa0416830-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|517 |
| chr3_2 | exon | 63869202 | 63870755 | 63869202 | ID=Msa0416830-mRNA-1:exon:13972;Parent=Msa0416830-mRNA-1 |
| chr3_2 | CDS | 63869202 | 63870755 | 63869202 | ID=Msa0416830-mRNA-1:cds;Parent=Msa0416830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
