AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0463490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0463490 MtrunA17_Chr3g0113651 93.629 518 32 1 476 993 1 517 0.0 1017
Msa0463490 MtrunA17_Chr3g0113651 85.049 515 34 7 1 472 1 515 0.0 871
Msa0463490 MtrunA17_Chr5g0437251 60.298 403 90 8 476 812 16 414 8.84e-153 468
Msa0463490 MtrunA17_Chr5g0437251 56.404 406 91 11 1 321 16 420 8.00e-133 416
Msa0463490 MtrunA17_Chr5g0437251 56.650 203 63 8 812 991 474 674 1.05e-48 184
Msa0463490 MtrunA17_Chr5g0437251 46.522 230 98 9 262 472 451 674 1.32e-37 151
Msa0463490 MtrunA17_Chr1g0187591 43.463 566 196 18 477 939 25 569 2.67e-119 379
Msa0463490 MtrunA17_Chr1g0187591 38.325 621 244 20 2 497 25 631 1.13e-105 343
Msa0463490 MtrunA17_Chr5g0430211 44.543 449 161 9 475 845 24 462 7.19e-114 367
Msa0463490 MtrunA17_Chr5g0430211 42.857 420 149 9 8 337 33 451 3.70e-99 327
Msa0463490 MtrunA17_Chr5g0430211 32.828 198 111 6 304 481 509 704 2.59e-16 84.0
Msa0463490 MtrunA17_Chr5g0430211 33.796 216 118 9 798 991 483 695 3.75e-15 80.1
Msa0463490 MtrunA17_Chr7g0257831 35.015 674 238 19 471 968 35 684 2.11e-101 334
Msa0463490 MtrunA17_Chr7g0257831 38.979 431 132 14 8 317 45 465 1.64e-76 266
Msa0463490 MtrunA17_Chr3g0105101 42.927 410 139 13 488 838 28 401 2.96e-85 280
Msa0463490 MtrunA17_Chr3g0105101 41.989 362 120 11 13 314 28 359 6.55e-72 244
Msa0463490 MtrunA17_Chr3g0105131 38.921 519 186 18 501 940 33 499 3.62e-85 283
Msa0463490 MtrunA17_Chr3g0105131 38.664 494 187 19 8 415 30 493 5.53e-74 253
Msa0463490 MtrunA17_Chr3g0088521 31.791 670 251 21 483 968 43 690 1.60e-78 271
Msa0463490 MtrunA17_Chr3g0088521 52.232 224 60 7 124 308 242 457 1.49e-62 226
Msa0463490 MtrunA17_Chr3g0088521 40.367 109 60 1 8 111 43 151 3.89e-17 86.7
Msa0463490 MtrunA17_Chr1g0171151 40.741 351 137 7 470 756 18 361 9.54e-76 261
Msa0463490 MtrunA17_Chr1g0171151 37.952 332 125 8 9 259 30 361 1.49e-58 212
Msa0463490 MtrunA17_Chr3g0092171 43.322 307 134 6 483 750 81 386 2.65e-71 245
Msa0463490 MtrunA17_Chr3g0092171 41.905 315 119 9 8 262 81 391 1.70e-63 224
Msa0463490 MtrunA17_Chr3g0092221 63.121 141 48 1 625 765 144 280 1.50e-58 206
Msa0463490 MtrunA17_Chr3g0092221 54.088 159 67 2 114 268 124 280 3.76e-52 188
Msa0463490 MtrunA17_Chr3g0105141 67.176 131 40 2 616 745 15 143 1.34e-55 190
Msa0463490 MtrunA17_Chr3g0105141 63.359 131 41 3 125 250 15 143 1.61e-50 175
Msa0463490 MtrunA17_Chr3g0105121 37.166 374 158 16 638 959 8 356 8.88e-49 177
Msa0463490 MtrunA17_Chr3g0105121 44.000 200 80 9 147 316 8 205 9.50e-38 145
Msa0463490 MtrunA17_Chr3g0135351 53.247 154 58 3 629 781 43 183 3.05e-46 167
Msa0463490 MtrunA17_Chr3g0135351 51.316 152 58 4 138 284 43 183 4.99e-42 155
Msa0463490 MtrunA17_Chr6g0487481 62.963 108 40 0 634 741 98 205 1.40e-45 168
Msa0463490 MtrunA17_Chr6g0487481 60.185 108 39 1 143 246 98 205 1.20e-41 157
Msa0463490 MtrunA17_Chr8g0389561 57.377 122 52 0 635 756 77 198 1.97e-45 168
Msa0463490 MtrunA17_Chr8g0389561 58.879 107 40 1 144 246 77 183 1.79e-40 154
Msa0463490 MtrunA17_Chr2g0324781 58.559 111 46 0 639 749 77 187 3.00e-41 157
Msa0463490 MtrunA17_Chr2g0324781 56.364 110 44 1 148 253 77 186 2.93e-37 145
Msa0463490 MtrunA17_Chr4g0040391 58.879 107 44 0 635 741 56 162 3.79e-41 154
Msa0463490 MtrunA17_Chr4g0040391 56.075 107 43 1 144 246 56 162 7.32e-37 141
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0463490 AT3G55980.1 48.258 574 209 20 484 992 29 579 1.14e-148 454
Msa0463490 AT3G55980.1 45.648 563 185 22 10 472 30 571 6.01e-129 403
Msa0463490 AT3G55980.2 48.258 574 209 20 484 992 96 646 2.55e-147 453
Msa0463490 AT3G55980.2 45.648 563 185 22 10 472 97 638 1.27e-127 401
Msa0463490 AT2G40140.2 47.826 575 228 17 477 991 25 587 6.79e-147 450
Msa0463490 AT2G40140.2 44.750 581 209 19 2 480 25 595 4.61e-127 398
Msa0463490 AT2G40140.1 47.826 575 228 17 477 991 25 587 6.79e-147 450
Msa0463490 AT2G40140.1 44.750 581 209 19 2 480 25 595 4.61e-127 398
Msa0463490 AT5G58620.1 44.521 584 208 19 483 961 12 584 2.54e-136 423
Msa0463490 AT5G58620.1 44.717 407 128 16 124 442 187 584 1.44e-85 288
Msa0463490 AT5G58620.1 52.727 110 46 2 8 111 12 121 3.63e-24 108
Msa0463490 AT2G41900.1 42.984 449 157 12 474 828 37 480 2.85e-98 325
Msa0463490 AT2G41900.1 52.033 246 85 10 117 335 233 472 1.71e-63 229
Msa0463490 AT2G41900.1 39.394 132 69 2 8 134 46 171 2.92e-20 97.1
Msa0463490 AT5G12850.1 35.032 628 254 21 483 964 40 659 9.31e-97 321
Msa0463490 AT5G12850.1 68.657 134 36 2 124 253 235 366 4.36e-60 219
Msa0463490 AT5G12850.1 41.284 109 58 2 8 111 40 147 1.11e-18 92.0
Msa0463490 AT4G29190.1 49.718 177 77 3 612 776 52 228 1.58e-47 174
Msa0463490 AT4G29190.1 38.735 253 129 7 133 360 64 315 8.92e-44 163
Msa0463490 AT2G19810.1 56.818 132 57 0 612 743 51 182 2.30e-47 174
Msa0463490 AT2G19810.1 58.333 120 46 1 133 248 63 182 3.28e-43 161
Msa0463490 AT2G25900.2 55.474 137 56 1 635 771 86 217 4.43e-47 171
Msa0463490 AT2G25900.2 59.821 112 41 1 144 251 86 197 4.03e-43 160
Msa0463490 AT2G25900.1 55.474 137 56 1 635 771 86 217 4.43e-47 171
Msa0463490 AT2G25900.1 59.821 112 41 1 144 251 86 197 4.03e-43 160
Msa0463490 AT5G07500.1 56.098 123 54 0 619 741 32 154 3.20e-46 166
Msa0463490 AT5G07500.1 54.472 123 52 1 128 246 32 154 2.03e-42 155
Msa0463490 AT1G03790.1 51.049 143 60 3 615 753 64 200 8.18e-40 152
Msa0463490 AT1G03790.1 45.963 161 64 4 124 279 64 206 4.56e-36 141
Msa0463490 AT5G44260.1 52.308 130 55 2 615 743 42 165 1.60e-38 148
Msa0463490 AT5G44260.1 51.538 130 52 3 124 248 42 165 3.32e-35 139

Find 208 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGAACATGGTTCCTATTT+TGG 0.050071 3_3:-62827300 None:intergenic
GAGCTTAACAATCTCAAATT+TGG 0.138458 3_3:-62831584 None:intergenic
CTTGAACATGGTTCCTGTTT+TGG 0.154085 3_3:-62832353 None:intergenic
GACACGAAGCCAAAGCTTTA+TGG 0.159998 3_3:+62832494 Msa0463490:CDS
TCTGAGAATTCTGAGATATT+TGG 0.200828 3_3:+62827688 Msa0463490:CDS
TCTGAGAATTCTGAGATATT+TGG 0.200828 3_3:+62832741 Msa0463490:CDS
GAGTTTAACAATCTCAAATT+TGG 0.214609 3_3:-62826525 None:intergenic
CTTCTTTGTTTGGAAGCATT+AGG 0.245406 3_3:+62831455 Msa0463490:CDS
AATAATCAAGCAGAAAATTT+TGG 0.246655 3_3:+62831645 Msa0463490:CDS
CTTATGATTGCTTCTTTGTT+TGG 0.252453 3_3:+62826389 Msa0463490:CDS
CAGATTGGATTTCAAATGAT+TGG 0.257763 3_3:+62827530 Msa0463490:intron
GAAGTTGAGAAGAAAGATTC+AGG 0.258178 3_3:+62826629 Msa0463490:CDS
CTTATGGTTGCTTCTTTGTT+TGG 0.265933 3_3:+62831445 Msa0463490:CDS
CTTCTTTGTTTGGAAGCATT+AGG 0.280824 3_3:+62826399 Msa0463490:CDS
CAGATTGGGTTTCAAATGAT+TGG 0.282097 3_3:+62832583 Msa0463490:CDS
CAGCTATAAGGATACTTCTT+TGG 0.295350 3_3:-62826815 None:intergenic
CAGCTATAAGGATACTTCTT+TGG 0.295350 3_3:-62831874 None:intergenic
CACATGTAATTTCCATTCTT+AGG 0.300468 3_3:-62827118 None:intergenic
CACATGTAATTTCCATTCTT+AGG 0.300468 3_3:-62832177 None:intergenic
ATTCAAGTAAAGTTGAGTTT+TGG 0.301880 3_3:-62826235 None:intergenic
ATTCAAGTAAAACTGAGTTT+TGG 0.311642 3_3:-62831291 None:intergenic
TTCTTTGTTTGGAAGCATTA+GGG 0.311661 3_3:+62826400 Msa0463490:CDS
TTCTTTGTTTGGAAGCATTA+GGG 0.311661 3_3:+62831456 Msa0463490:CDS
AAAACACCATTGTTTATATC+AGG 0.317396 3_3:-62826674 None:intergenic
AAAACACCATTGTTTATATC+AGG 0.317396 3_3:-62831733 None:intergenic
GGTTTCAGCTGAACCAAAAT+AGG 0.320831 3_3:+62827287 Msa0463490:intron
CTCATAGATTGGAATTGATT+AGG 0.322495 3_3:-62832315 None:intergenic
ACACAAATAGCCACTCAATA+TGG 0.335991 3_3:+62831258 Msa0463490:intron
TGAAAAGAGAACACCCCTTA+TGG 0.338972 3_3:+62831429 Msa0463490:CDS
GGTGTAGAAACATTTGAAAT+TGG 0.342203 3_3:-62832123 None:intergenic
ACTCACATGCATCTTTCTTC+TGG 0.348032 3_3:-62826871 None:intergenic
ACTCACATGCATCTTTCTTC+TGG 0.348032 3_3:-62831930 None:intergenic
GCTTCTAATTCCTTTAAATC+AGG 0.352563 3_3:-62831670 None:intergenic
ATGTAAATGAGGCAGGTTAT+TGG 0.356150 3_3:+62831371 Msa0463490:CDS
GCATTACATTGTGCTGTTGC+TGG 0.358959 3_3:+62826491 Msa0463490:CDS
GCATTACATTGTGCTGTTGC+TGG 0.358959 3_3:+62831550 Msa0463490:CDS
TCGATTCGGAAGCACCGATA+TGG 0.364885 3_3:-62832536 None:intergenic
GAAGCTGAGAAGAAAGATTC+AGG 0.379366 3_3:+62831688 Msa0463490:CDS
GGTGTTGAAACATTTGAAAT+TGG 0.379750 3_3:-62827064 None:intergenic
ATTTGAGATTGTTAAACTCT+TGG 0.381581 3_3:+62826529 Msa0463490:CDS
AGGCCTTTGTATGCTTCTAC+TGG 0.382036 3_3:+62827013 Msa0463490:CDS
AGGCCTTTGTATGCTTCTAC+TGG 0.382036 3_3:+62832072 Msa0463490:CDS
GAACTCTGGTCTGTCAGATT+GGG 0.382476 3_3:+62832569 Msa0463490:CDS
ATGAGAAAATCATCAGCATA+TGG 0.391943 3_3:+62832411 Msa0463490:CDS
GCATGTCCCTTTGCGAAACT+CGG 0.397119 3_3:-62826849 None:intergenic
GCATGTCCCTTTGCGAAACT+CGG 0.397119 3_3:-62831908 None:intergenic
CTGCCCATGGTGATAACTTC+TGG 0.401773 3_3:-62827741 None:intergenic
AGATTGGATTTCAAATGATT+GGG 0.403651 3_3:+62827531 Msa0463490:intron
GCATTGAAATACCATGTAAC+AGG 0.408752 3_3:-62832281 None:intergenic
GTTAAACTCTTGGTTGATGC+TGG 0.410340 3_3:+62826539 Msa0463490:CDS
GTTAAGCTCTTGCTTGATGC+TGG 0.411467 3_3:+62831598 Msa0463490:CDS
CAAAAGGGAAGTAGAAGAAA+AGG 0.421816 3_3:+62831342 Msa0463490:CDS
CAAACAAAGAAGCAATCATA+AGG 0.422681 3_3:-62826388 None:intergenic
CAAAAGGGAAGTAGAAGAAA+AGG 0.424560 3_3:+62826286 Msa0463490:CDS
ATGATATTGAAGCTTTCAAA+AGG 0.425062 3_3:+62826270 Msa0463490:CDS
ACATCCGGTTCAACATGTTC+TGG 0.431115 3_3:-62827631 None:intergenic
TGAACTCTGGTCTGTCAGAT+TGG 0.432028 3_3:+62832568 Msa0463490:CDS
GCATGTTGAGGCCGTGCAAC+GGG 0.432944 3_3:-62832672 None:intergenic
TGGAATTGATTAGGAGTTGA+AGG 0.434731 3_3:-62832306 None:intergenic
ATGATATTGAAGCATTCAAA+AGG 0.436887 3_3:+62831326 Msa0463490:CDS
CAAACAAAGAAGCAACCATA+AGG 0.445004 3_3:-62831444 None:intergenic
GCTGAAACCTACTCATAGAT+TGG 0.445115 3_3:-62832326 None:intergenic
AAGGGATTTGTATCAAGAAA+TGG 0.446940 3_3:+62827198 Msa0463490:CDS
GTTCATCCTACTGTTGGATT+CGG 0.447818 3_3:-62827497 None:intergenic
AAACAAAGAAGCAATCATAA+GGG 0.448581 3_3:-62826387 None:intergenic
GGGCACGGAACACAGCTATA+AGG 0.448836 3_3:-62831886 None:intergenic
AACATGTTCTGGCCGTGCCA+CGG 0.451893 3_3:-62827620 None:intergenic
CACCGCGATCCATAAAGCTT+TGG 0.452463 3_3:-62832503 None:intergenic
TTCTCCCCTGGATGAACAAA+TGG 0.453606 3_3:-62826776 None:intergenic
TTCTCCCCTGGATGAACAAA+TGG 0.453606 3_3:-62831835 None:intergenic
GCTACAATTTGCTCTGTCCA+TGG 0.454559 3_3:-62832807 None:intergenic
CTGCAGCAGTGAAGAATTCA+AGG 0.455073 3_3:+62827404 Msa0463490:CDS
CTGCAGCAGTGATGAATTCA+AGG 0.455073 3_3:+62832457 Msa0463490:CDS
CATGTCCCTTTGCGAAACTC+GGG 0.458325 3_3:-62826848 None:intergenic
CATGTCCCTTTGCGAAACTC+GGG 0.458325 3_3:-62831907 None:intergenic
AATCTCATCTTTACAAAGCC+TGG 0.458636 3_3:-62832001 None:intergenic
GGCTATGATATCAATGAGGC+AGG 0.459884 3_3:+62826308 Msa0463490:CDS
CACCGCGATCCATAAAACTT+TGG 0.461341 3_3:-62827450 None:intergenic
GGTTTCAGCAGAACCAAAAC+AGG 0.464964 3_3:+62832340 Msa0463490:CDS
GGCTTTGTAAAGATGAGATT+AGG 0.465521 3_3:+62832004 Msa0463490:CDS
AAAAGGGAAGTAGAAGAAAA+GGG 0.470783 3_3:+62831343 Msa0463490:CDS
GTTTGATTCATCAGCTGCTA+TGG 0.471231 3_3:+62832434 Msa0463490:CDS
GAGTGTCCATTTGTTCATCC+AGG 0.473709 3_3:+62826770 Msa0463490:CDS
AAACAAAGAAGCAACCATAA+GGG 0.473747 3_3:-62831443 None:intergenic
ACATGTTCTGGCCGTGCCAC+GGG 0.474667 3_3:-62827619 None:intergenic
GCTGATTCATCTCCTAAGAA+TGG 0.478855 3_3:+62827106 Msa0463490:CDS
GCTGATTCATCTCCTAAGAA+TGG 0.478855 3_3:+62832165 Msa0463490:CDS
AGATTGGGTTTCAAATGATT+GGG 0.479244 3_3:+62832584 Msa0463490:CDS
GTTCATCCTACTGTTCGATT+CGG 0.479491 3_3:-62832550 None:intergenic
TTCATCCAGGGGAGAATGCT+AGG 0.479775 3_3:+62826783 Msa0463490:CDS
TTCATCCAGGGGAGAATGCT+AGG 0.479775 3_3:+62831842 Msa0463490:CDS
ATGAGAAAACCATCAGCATA+TGG 0.480414 3_3:+62827358 Msa0463490:CDS
GGTTATGATGTAAATGAGGC+AGG 0.483515 3_3:+62831364 Msa0463490:CDS
CTACAATTTGCTCTGTCCAT+GGG 0.485011 3_3:-62832806 None:intergenic
CAAGGGGTTACACTCATGAT+TGG 0.486439 3_3:+62831803 Msa0463490:CDS
GATGAAACAATGCTGTTGAA+TGG 0.488330 3_3:-62832384 None:intergenic
GAGTGTCCATTTGTTCATCC+AGG 0.489580 3_3:+62831829 Msa0463490:CDS
ACGGCCAGAACATGTTGAAC+CGG 0.490202 3_3:+62827627 Msa0463490:CDS
CTGCTTGATTATTTCATCAA+GGG 0.490204 3_3:-62831635 None:intergenic
TCTGCTTGATTATTTCATCA+AGG 0.491359 3_3:-62831636 None:intergenic
GGCATGTTGAGGCCGTGCAA+CGG 0.492495 3_3:-62832673 None:intergenic
ACCAGAGTTCATCCTACTGT+TGG 0.492760 3_3:-62827503 None:intergenic
AAGGGATTTGTATCAAGAAA+TGG 0.494896 3_3:+62832257 Msa0463490:CDS
CAAGGGGTTACACTCATGAT+TGG 0.497804 3_3:+62826744 Msa0463490:CDS
GATGAAACAGTGTTGTTGAA+TGG 0.499041 3_3:-62827331 None:intergenic
GAATGAACCCACGAGACATC+CGG 0.501123 3_3:-62827646 None:intergenic
GAATGAACCCACGAGACATC+TGG 0.502120 3_3:-62832699 None:intergenic
ATTTGATTCATCAGCTGCTA+TGG 0.506008 3_3:+62827381 Msa0463490:CDS
AACCCACGAGACATCTGGTT+CGG 0.516681 3_3:-62832694 None:intergenic
CAAGAAATGGACCTGTTACA+TGG 0.528005 3_3:+62832270 Msa0463490:CDS
ATCACCATGGGCAGAGCAGA+TGG 0.529162 3_3:+62827750 Msa0463490:CDS
AACACCACCTATGTCTCCAT+TGG 0.529230 3_3:+62827081 Msa0463490:CDS
TGATATTGAAGCATTCAAAA+GGG 0.532093 3_3:+62831327 Msa0463490:CDS
AAAAGGGAAGTAGAAGAAAA+GGG 0.532219 3_3:+62826287 Msa0463490:CDS
CTTCTCCTAGCATTCTCCCC+TGG 0.532406 3_3:-62826788 None:intergenic
CTTCTCCTAGCATTCTCCCC+TGG 0.532406 3_3:-62831847 None:intergenic
CTGCTGCTTCGCCCGTTGCA+CGG 0.534070 3_3:+62832661 Msa0463490:CDS
TACACCACCTATGTCTCCAT+TGG 0.535040 3_3:+62832140 Msa0463490:CDS
GTTAATGTGAACATGGCAAT+TGG 0.535532 3_3:+62826452 Msa0463490:CDS
GTTAATGTGAACATGGCAAT+TGG 0.535532 3_3:+62831511 Msa0463490:CDS
TGAGAAAATCATCAGCATAT+GGG 0.536370 3_3:+62832412 Msa0463490:CDS
GGTTCATTCGCTTGTTCAAG+AGG 0.536739 3_3:+62827660 Msa0463490:CDS
GGTTCATTCGCTTGTTCAAG+AGG 0.536739 3_3:+62832713 Msa0463490:CDS
GCTACCATCTGCTCTGCCCA+TGG 0.541733 3_3:-62827754 None:intergenic
CCGTGCCCCGAGTTTCGCAA+AGG 0.542263 3_3:+62826842 Msa0463490:CDS
CCGTGCCCCGAGTTTCGCAA+AGG 0.542263 3_3:+62831901 Msa0463490:CDS
CGTGCCCCGAGTTTCGCAAA+GGG 0.545575 3_3:+62826843 Msa0463490:CDS
CGTGCCCCGAGTTTCGCAAA+GGG 0.545575 3_3:+62831902 Msa0463490:CDS
ATTGGCAAAGATTCTTGTGA+AGG 0.549932 3_3:-62827046 None:intergenic
ATTGGCAAAGATTCTTGTGA+AGG 0.549932 3_3:-62832105 None:intergenic
CAAAGTGAAGACTTGCTCAA+GGG 0.550348 3_3:+62826727 Msa0463490:CDS
CAAAGTGAAGACTTGCTCAA+GGG 0.550348 3_3:+62831786 Msa0463490:CDS
AAAGGGTTATGATGTAAATG+AGG 0.551386 3_3:+62831360 Msa0463490:CDS
AGTGTCCATTTGTTCATCCA+GGG 0.552058 3_3:+62826771 Msa0463490:CDS
TTGGGATGAGCTGCATAAGT+TGG 0.555027 3_3:+62832602 Msa0463490:CDS
AGCCTTGTTCTGTATTGTGC+AGG 0.555273 3_3:-62826926 None:intergenic
TCAGCTACCAATGGAGACAT+AGG 0.556570 3_3:-62827088 None:intergenic
TCAGCTACCAATGGAGACAT+AGG 0.556570 3_3:-62832147 None:intergenic
AGTGTCCATTTGTTCATCCA+GGG 0.559914 3_3:+62831830 Msa0463490:CDS
TAGTTGCTTCGCCCGTGGCA+CGG 0.561386 3_3:+62827608 Msa0463490:CDS
TCAAAGTGAAGACTTGCTCA+AGG 0.569283 3_3:+62826726 Msa0463490:CDS
TCAAAGTGAAGACTTGCTCA+AGG 0.569283 3_3:+62831785 Msa0463490:CDS
TGATATTGAAGCTTTCAAAA+GGG 0.570886 3_3:+62826271 Msa0463490:CDS
ATCAATTCCAATCTATGAGT+AGG 0.579232 3_3:+62832319 Msa0463490:CDS
ATGTTGAACCGGATGTCTCG+TGG 0.581147 3_3:+62827638 Msa0463490:CDS
AGCCTGGTTCTGTATTGTGC+AGG 0.587665 3_3:-62831985 None:intergenic
CCTTTGCGAAACTCGGGGCA+CGG 0.588011 3_3:-62826842 None:intergenic
CCTTTGCGAAACTCGGGGCA+CGG 0.588011 3_3:-62831901 None:intergenic
TATGGTAGTTGCTTCGCCCG+TGG 0.589438 3_3:+62827603 Msa0463490:CDS
ATGCCGAACCAGATGTCTCG+TGG 0.590815 3_3:+62832691 Msa0463490:CDS
TTACATTGTGCTGTTGCTGG+TGG 0.591769 3_3:+62826494 Msa0463490:CDS
TTACATTGTGCTGTTGCTGG+TGG 0.591769 3_3:+62831553 Msa0463490:CDS
ATCCTGCACAATACAGAACC+AGG 0.592720 3_3:+62831983 Msa0463490:CDS
GGAGATGAATCAGCTACCAA+TGG 0.593824 3_3:-62827097 None:intergenic
GGAGATGAATCAGCTACCAA+TGG 0.593824 3_3:-62832156 None:intergenic
ACTTTGGCTTCGTGTCGCAA+AGG 0.595220 3_3:-62827434 None:intergenic
AACAAAGAAGCAACCATAAG+GGG 0.599426 3_3:-62831442 None:intergenic
GAATCAAATCCATATGCTGA+TGG 0.601293 3_3:-62827367 None:intergenic
AAAGTGAAGACTTGCTCAAG+GGG 0.602277 3_3:+62826728 Msa0463490:CDS
AAAGTGAAGACTTGCTCAAG+GGG 0.602277 3_3:+62831787 Msa0463490:CDS
TCCAACAGTAGGATGAACTC+TGG 0.604125 3_3:+62827502 Msa0463490:CDS
CTGAGATATTTGGTGCTGAG+AGG 0.605138 3_3:+62832751 Msa0463490:CDS
ACATCTGGTTCGGCATGTTG+AGG 0.605882 3_3:-62832684 None:intergenic
CATCATCATTCAAACAAACA+TGG 0.606083 3_3:+62831489 Msa0463490:CDS
AAACATGGTTAATGTGAACA+TGG 0.608674 3_3:+62826445 Msa0463490:CDS
AAACATGGTTAATGTGAACA+TGG 0.608674 3_3:+62831504 Msa0463490:CDS
TAACCAGAAGTTATCACCAT+GGG 0.608964 3_3:+62827738 Msa0463490:CDS
ATGGATAACTTGCTTGAACA+TGG 0.610654 3_3:-62832365 None:intergenic
GTGCTTCCGAATCGAACAGT+AGG 0.611938 3_3:+62832544 Msa0463490:CDS
CTAAGAATGGAAATTACATG+TGG 0.612183 3_3:+62827119 Msa0463490:CDS
CTAAGAATGGAAATTACATG+TGG 0.612183 3_3:+62832178 Msa0463490:CDS
TTTGTTTGGAAGCATTAGGG+TGG 0.614081 3_3:+62826403 Msa0463490:CDS
TTTGTTTGGAAGCATTAGGG+TGG 0.614081 3_3:+62831459 Msa0463490:CDS
CACACAAACATGAAGAGTTG+AGG 0.614467 3_3:+62826993 Msa0463490:CDS
CACACAAACATGAAGAGTTG+AGG 0.614467 3_3:+62832052 Msa0463490:CDS
TACAATTTGCTCTGTCCATG+GGG 0.617465 3_3:-62832805 None:intergenic
ATGGATAATTTGCTTGAACA+TGG 0.617719 3_3:-62827312 None:intergenic
ATGTCCCTTTGCGAAACTCG+GGG 0.621584 3_3:-62826847 None:intergenic
ATGTCCCTTTGCGAAACTCG+GGG 0.621584 3_3:-62831906 None:intergenic
CTGAGATATTTGGTGCTGAG+CGG 0.624831 3_3:+62827698 Msa0463490:CDS
GTGCTTCCGAATCCAACAGT+AGG 0.625292 3_3:+62827491 Msa0463490:CDS
TGGATGAACAAATGGACACT+CGG 0.631229 3_3:-62831827 None:intergenic
GTGTCCATTTGTTCATCCAG+GGG 0.633464 3_3:+62831831 Msa0463490:CDS
TGTTGAACCGGATGTCTCGT+GGG 0.635368 3_3:+62827639 Msa0463490:CDS
TCATTGCCTGATATAAACAA+TGG 0.636775 3_3:+62826668 Msa0463490:CDS
TCATTGCCTGATATAAACAA+TGG 0.636775 3_3:+62831727 Msa0463490:CDS
AACAAAGAAGCAATCATAAG+GGG 0.639045 3_3:-62826386 None:intergenic
TCGAACAGTAGGATGAACTC+TGG 0.639055 3_3:+62832555 Msa0463490:CDS
GTGTCCATTTGTTCATCCAG+GGG 0.641621 3_3:+62826772 Msa0463490:CDS
TGCCGAACCAGATGTCTCGT+GGG 0.643543 3_3:+62832692 Msa0463490:CDS
ATCCTGCACAATACAGAACA+AGG 0.644193 3_3:+62826924 Msa0463490:CDS
GGTGTGTCAAGACACCATAT+CGG 0.652931 3_3:+62832522 Msa0463490:CDS
TGGATTCGGAAGCACTGATG+TGG 0.653710 3_3:-62827483 None:intergenic
AGCCAAAGCTTTATGGATCG+CGG 0.654674 3_3:+62832501 Msa0463490:CDS
GCTTTGGCTTCGTGTCACAA+AGG 0.657576 3_3:-62832487 None:intergenic
ATAAACAGAAGTTATCCCCA+TGG 0.657774 3_3:+62832790 Msa0463490:CDS
ATATATCATTGAAACAAACA+TGG 0.659164 3_3:+62826430 Msa0463490:CDS
GCTATGATATCAATGAGGCA+GGG 0.681589 3_3:+62826309 Msa0463490:CDS
GCTACCAATGGAGACATAGG+TGG 0.695473 3_3:-62827085 None:intergenic
GCTACCAATGGAGACATAGG+TGG 0.695473 3_3:-62832144 None:intergenic
ATAACCAGAAGTTATCACCA+TGG 0.698019 3_3:+62827737 Msa0463490:CDS
AAAGGGCTATGATATCAATG+AGG 0.712259 3_3:+62826304 Msa0463490:CDS
GAACCAGTAGAAGCATACAA+AGG 0.717416 3_3:-62827016 None:intergenic
GAACCAGTAGAAGCATACAA+AGG 0.717416 3_3:-62832075 None:intergenic
AAATATCTCAGAATTCTCAG+AGG 0.724613 3_3:-62827686 None:intergenic
AAATATCTCAGAATTCTCAG+AGG 0.724613 3_3:-62832739 None:intergenic
GATGCATGTGAGTATTCACA+TGG 0.742964 3_3:+62826881 Msa0463490:CDS
GATGCATGTGAGTATTCACA+TGG 0.742964 3_3:+62831940 Msa0463490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAATATAAAATTTAA+TGG - chr3_3:62830512-62830531 None:intergenic 0.0%
!!! AATTTTTTTTTTCTAATTCA+AGG + chr3_3:62829286-62829305 Msa0463490:intron 10.0%
!!! TTTCATTTTTTTAGAATAAT+AGG - chr3_3:62830111-62830130 None:intergenic 10.0%
!!! TATTCTAAAAAAATGAAAAA+TGG + chr3_3:62830113-62830132 Msa0463490:intron 10.0%
!!! TTCATCATTTATAAAAATTT+TGG - chr3_3:62830226-62830245 None:intergenic 10.0%
!! ATAAATTGCATAAATATAGA+TGG + chr3_3:62828586-62828605 Msa0463490:intron 15.0%
!!! TCACTAATTTTTATTGAAAT+TGG + chr3_3:62829226-62829245 Msa0463490:intron 15.0%
!!! ATAAGCAGATAATTATTTTT+AGG + chr3_3:62829453-62829472 Msa0463490:intron 15.0%
!! AATAAAAGAAAATGAAAGTT+AGG + chr3_3:62829495-62829514 Msa0463490:intron 15.0%
!! ATAGTTAAATCAATACTATT+GGG - chr3_3:62830087-62830106 None:intergenic 15.0%
!! AATAGTTAAATCAATACTAT+TGG - chr3_3:62830088-62830107 None:intergenic 15.0%
!! ATACTCACATTAATAAAAAT+TGG - chr3_3:62830200-62830219 None:intergenic 15.0%
!! AAAAAAAAGAGATTTGATAA+AGG - chr3_3:62830562-62830581 None:intergenic 15.0%
!! AAACCAAATTTAATCAAAAT+AGG + chr3_3:62830600-62830619 Msa0463490:intron 15.0%
!!! ATTCCTATTTTGATTAAATT+TGG - chr3_3:62830606-62830625 None:intergenic 15.0%
!!! TTTTGGATTTAGAAATAATA+TGG + chr3_3:62832638-62832657 Msa0463490:CDS 15.0%
!!! TTTTGGTATTGTAGAAAAAT+AGG + chr3_3:62826332-62826351 Msa0463490:intron 20.0%
!! ATATATCATTGAAACAAACA+TGG + chr3_3:62826430-62826449 Msa0463490:CDS 20.0%
!!! ACTTCTAATTCTTTTGATTT+AGG - chr3_3:62826614-62826633 None:intergenic 20.0%
!!! TTTTGGATTTAGAAATTCTA+TGG + chr3_3:62827585-62827604 Msa0463490:CDS 20.0%
!! TTGAAATGTTGTTAGAATAT+AGG + chr3_3:62827871-62827890 Msa0463490:intron 20.0%
!! ATAAAATAGAGAAATGGATA+AGG - chr3_3:62828162-62828181 None:intergenic 20.0%
!! TTTCACATAAAATAGAGAAA+TGG - chr3_3:62828168-62828187 None:intergenic 20.0%
!! AATAATCAAGCATATTCTTA+TGG + chr3_3:62828250-62828269 Msa0463490:intron 20.0%
!! CAATAAGATTCATACTTAAA+GGG - chr3_3:62828292-62828311 None:intergenic 20.0%
!! ACAATAAGATTCATACTTAA+AGG - chr3_3:62828293-62828312 None:intergenic 20.0%
!!! AGACAAAAGTTTAGAATTAA+AGG + chr3_3:62828555-62828574 Msa0463490:intron 20.0%
!!! ATTTTAATGTTCAAAACTCT+TGG - chr3_3:62828838-62828857 None:intergenic 20.0%
!! TACATTACAACTTAAAGTTA+TGG + chr3_3:62829613-62829632 Msa0463490:intron 20.0%
!! AATAACCTATGTATTACAAT+TGG - chr3_3:62829689-62829708 None:intergenic 20.0%
!!! CATTTTAACAAAAATCCAAT+AGG - chr3_3:62829981-62830000 None:intergenic 20.0%
!!! CAACATTTATGACAATTTTT+CGG + chr3_3:62830144-62830163 Msa0463490:intron 20.0%
!!! ATCTAGAAATTTTATGTTGT+AGG - chr3_3:62830263-62830282 None:intergenic 20.0%
!!! TTATTTTAAGAGAGAAAATG+AGG - chr3_3:62830670-62830689 None:intergenic 20.0%
!!! TTATTTTAAGAGAGAAAATG+AGG - chr3_3:62830670-62830689 None:intergenic 20.0%
!! TATTGGTATTGTAGAAAAAT+AGG + chr3_3:62831388-62831407 Msa0463490:CDS 20.0%
!!! AATAATCAAGCAGAAAATTT+TGG + chr3_3:62831645-62831664 Msa0463490:CDS 20.0%
!! ATTCAAGTAAAGTTGAGTTT+TGG - chr3_3:62826238-62826257 None:intergenic 25.0%
! ATGATATTGAAGCTTTCAAA+AGG + chr3_3:62826270-62826289 Msa0463490:CDS 25.0%
! TGATATTGAAGCTTTCAAAA+GGG + chr3_3:62826271-62826290 Msa0463490:CDS 25.0%
! AAACAAAGAAGCAATCATAA+GGG - chr3_3:62826390-62826409 None:intergenic 25.0%
! GAGTTTAACAATCTCAAATT+TGG - chr3_3:62826528-62826547 None:intergenic 25.0%
!! ATTTGAGATTGTTAAACTCT+TGG + chr3_3:62826529-62826548 Msa0463490:CDS 25.0%
! AAAACACCATTGTTTATATC+AGG - chr3_3:62826677-62826696 None:intergenic 25.0%
! AGATTGGATTTCAAATGATT+GGG + chr3_3:62827531-62827550 Msa0463490:intron 25.0%
!! TTGAAAAAATCTGCTTCTTT+TGG + chr3_3:62827568-62827587 Msa0463490:CDS 25.0%
! ACTTAGTAAGAATAATCAAG+AGG - chr3_3:62827788-62827807 None:intergenic 25.0%
! GATCAAGTTTATAAGTTCAA+TGG + chr3_3:62828058-62828077 Msa0463490:intron 25.0%
! TTATAAGTTCAATGGTTTCT+TGG + chr3_3:62828066-62828085 Msa0463490:intron 25.0%
! GAATATTATAAAAAGGCCTT+AGG + chr3_3:62828100-62828119 Msa0463490:intron 25.0%
! TATTATTGAGATACACTCAA+AGG - chr3_3:62828234-62828253 None:intergenic 25.0%
! AATAAAATAGAGTCTAGACA+TGG + chr3_3:62828456-62828475 Msa0463490:intron 25.0%
! ATAAAATAGAGTCTAGACAT+GGG + chr3_3:62828457-62828476 Msa0463490:intron 25.0%
! GGTTATAGGCTATAAATATA+GGG - chr3_3:62828768-62828787 None:intergenic 25.0%
! AGGTTATAGGCTATAAATAT+AGG - chr3_3:62828769-62828788 None:intergenic 25.0%
!!! AAGTATTTGTTTTGGTTTCA+AGG - chr3_3:62829173-62829192 None:intergenic 25.0%
!!! TTGCTTCAAAGTATTTGTTT+TGG - chr3_3:62829181-62829200 None:intergenic 25.0%
! AAAGGGGAAATAAATACAAA+TGG - chr3_3:62829355-62829374 None:intergenic 25.0%
! TATTTATTTCCCCTTTCATA+AGG + chr3_3:62829359-62829378 Msa0463490:intron 25.0%
! ATTTATTTCCCCTTTCATAA+GGG + chr3_3:62829360-62829379 Msa0463490:intron 25.0%
! ATTATTATGCCCTTATGAAA+GGG - chr3_3:62829372-62829391 None:intergenic 25.0%
! AATTATTATGCCCTTATGAA+AGG - chr3_3:62829373-62829392 None:intergenic 25.0%
! CACTTCAATGACATTATTAT+GGG + chr3_3:62829640-62829659 Msa0463490:intron 25.0%
! TCAATCCAATTGTAATACAT+AGG + chr3_3:62829681-62829700 Msa0463490:intron 25.0%
! ATATTATCATGTGTCACAAT+TGG + chr3_3:62829816-62829835 Msa0463490:intron 25.0%
! TCTCCTTGAAAATATGTTAT+GGG + chr3_3:62829893-62829912 Msa0463490:intron 25.0%
! TCACATTAATAAAAATTGGC+AGG - chr3_3:62830196-62830215 None:intergenic 25.0%
!! ACATTCTTCAAAAGCAATTT+TGG + chr3_3:62830357-62830376 Msa0463490:intron 25.0%
! AGGACAATAAAGGAAAATAA+TGG - chr3_3:62830542-62830561 None:intergenic 25.0%
! GATTTGATAAAGGACAATAA+AGG - chr3_3:62830552-62830571 None:intergenic 25.0%
! ATTTGGATAACTTTGAATGT+TGG - chr3_3:62830812-62830831 None:intergenic 25.0%
!!! CCTTTTATTGGATAGTTTTA+CGG - chr3_3:62830907-62830926 None:intergenic 25.0%
!! ATTCAAGTAAAACTGAGTTT+TGG - chr3_3:62831294-62831313 None:intergenic 25.0%
!! ATGATATTGAAGCATTCAAA+AGG + chr3_3:62831326-62831345 Msa0463490:CDS 25.0%
!! TGATATTGAAGCATTCAAAA+GGG + chr3_3:62831327-62831346 Msa0463490:CDS 25.0%
! AAAACACCATTGTTTATATC+AGG - chr3_3:62826677-62826696 None:intergenic 25.0%
AAAAGGGAAGTAGAAGAAAA+GGG + chr3_3:62826287-62826306 Msa0463490:CDS 30.0%
AACAAAGAAGCAATCATAAG+GGG - chr3_3:62826389-62826408 None:intergenic 30.0%
CAAACAAAGAAGCAATCATA+AGG - chr3_3:62826391-62826410 None:intergenic 30.0%
CTTATGATTGCTTCTTTGTT+TGG + chr3_3:62826389-62826408 Msa0463490:CDS 30.0%
!! TTCTTTGTTTGGAAGCATTA+GGG + chr3_3:62826400-62826419 Msa0463490:CDS 30.0%
AAACATGGTTAATGTGAACA+TGG + chr3_3:62826445-62826464 Msa0463490:CDS 30.0%
!!! CTGCTTAATTTTTTCGTCAA+GGG - chr3_3:62826579-62826598 None:intergenic 30.0%
!!! TCTGCTTAATTTTTTCGTCA+AGG - chr3_3:62826580-62826599 None:intergenic 30.0%
TCATTGCCTGATATAAACAA+TGG + chr3_3:62826668-62826687 Msa0463490:CDS 30.0%
! GGTGTTGAAACATTTGAAAT+TGG - chr3_3:62827067-62827086 None:intergenic 30.0%
CACATGTAATTTCCATTCTT+AGG - chr3_3:62827121-62827140 None:intergenic 30.0%
CTAAGAATGGAAATTACATG+TGG + chr3_3:62827119-62827138 Msa0463490:CDS 30.0%
AAGGGATTTGTATCAAGAAA+TGG + chr3_3:62827198-62827217 Msa0463490:CDS 30.0%
!! CAAGAAATGGATTTGTTACA+TGG + chr3_3:62827211-62827230 Msa0463490:intron 30.0%
TGCAATCTATGACTATGAAT+AGG + chr3_3:62827266-62827285 Msa0463490:intron 30.0%
!! ATGGATAATTTGCTTGAACA+TGG - chr3_3:62827315-62827334 None:intergenic 30.0%
CAGATTGGATTTCAAATGAT+TGG + chr3_3:62827530-62827549 Msa0463490:intron 30.0%
AAATATCTCAGAATTCTCAG+AGG - chr3_3:62827689-62827708 None:intergenic 30.0%
!! TCTGAGAATTCTGAGATATT+TGG + chr3_3:62827688-62827707 Msa0463490:CDS 30.0%
!!! CTAACCTGAACTTTTTTTCT+TGG - chr3_3:62827909-62827928 None:intergenic 30.0%
TAAAAAGTTGTCAATCCACA+TGG + chr3_3:62827988-62828007 Msa0463490:intron 30.0%
TCACGACTAATAACTAGATT+GGG - chr3_3:62828027-62828046 None:intergenic 30.0%
ATCACGACTAATAACTAGAT+TGG - chr3_3:62828028-62828047 None:intergenic 30.0%
TGATATCAAACTTCACCTTT+CGG + chr3_3:62828370-62828389 Msa0463490:intron 30.0%
! AGTAGACTTGTTTAAGTCTT+GGG - chr3_3:62828519-62828538 None:intergenic 30.0%
!!! GTTTTAGCAGTTTTGAAACT+AGG - chr3_3:62828908-62828927 None:intergenic 30.0%
!!! ATGACCTTTTTCAAGTGTTA+CGG - chr3_3:62829073-62829092 None:intergenic 30.0%
AAGAAAGAGAAGAAAAGTCA+AGG - chr3_3:62829099-62829118 None:intergenic 30.0%
TTATTATGCCCTTATGAAAG+GGG - chr3_3:62829371-62829390 None:intergenic 30.0%
AATAGAGATTAGTACCTAAG+TGG - chr3_3:62829585-62829604 None:intergenic 30.0%
GCACTTCAATGACATTATTA+TGG + chr3_3:62829639-62829658 Msa0463490:intron 30.0%
CTCTCCTTGAAAATATGTTA+TGG + chr3_3:62829892-62829911 Msa0463490:intron 30.0%
CTCCTTGAAAATATGTTATG+GGG + chr3_3:62829894-62829913 Msa0463490:intron 30.0%
TAACAAAAATCCAATAGGTG+TGG - chr3_3:62829976-62829995 None:intergenic 30.0%
GCAAGAGAATATGAAGAAAA+TGG - chr3_3:62830012-62830031 None:intergenic 30.0%
AATACTATTGGGAAAATGAG+GGG - chr3_3:62830076-62830095 None:intergenic 30.0%
CAATACTATTGGGAAAATGA+GGG - chr3_3:62830077-62830096 None:intergenic 30.0%
TCAATACTATTGGGAAAATG+AGG - chr3_3:62830078-62830097 None:intergenic 30.0%
! ACCTTCTCTTTGAAAATACT+TGG + chr3_3:62830294-62830313 Msa0463490:intron 30.0%
! CCTTCTCTTTGAAAATACTT+GGG + chr3_3:62830295-62830314 Msa0463490:intron 30.0%
!! TGACGATTTTAGTATCTGTT+TGG + chr3_3:62830324-62830343 Msa0463490:intron 30.0%
! TTCTTCAAAAGCAATTTTGG+TGG + chr3_3:62830360-62830379 Msa0463490:intron 30.0%
TTCTTGTAAACTCAAAAGCT+AGG - chr3_3:62830481-62830500 None:intergenic 30.0%
AAGAAGAGAAGGGTTATATT+TGG - chr3_3:62830829-62830848 None:intergenic 30.0%
CCGTAAAACTATCCAATAAA+AGG + chr3_3:62830904-62830923 Msa0463490:intron 30.0%
GCGTTTCTTATAAACATTGT+TGG - chr3_3:62830988-62831007 None:intergenic 30.0%
!! TCTTCTTTGACTTGTATACT+TGG - chr3_3:62831049-62831068 None:intergenic 30.0%
CAAAGCCTCACATTATAAAA+AGG + chr3_3:62831147-62831166 Msa0463490:intron 30.0%
! GTAGTCCTTTTTATAATGTG+AGG - chr3_3:62831155-62831174 None:intergenic 30.0%
!!! TAAGAAGGTTTTGATTGTGA+AGG - chr3_3:62831199-62831218 None:intergenic 30.0%
TAAGTAGAGGGAAATTAAGA+AGG - chr3_3:62831214-62831233 None:intergenic 30.0%
GAGATGAAATAGTAAGTAGA+GGG - chr3_3:62831226-62831245 None:intergenic 30.0%
AGAGATGAAATAGTAAGTAG+AGG - chr3_3:62831227-62831246 None:intergenic 30.0%
!! AACTTGTTTTCCATATTGAG+TGG - chr3_3:62831271-62831290 None:intergenic 30.0%
AAAAGGGAAGTAGAAGAAAA+GGG + chr3_3:62826287-62826306 Msa0463490:CDS 30.0%
AAAGGGTTATGATGTAAATG+AGG + chr3_3:62831360-62831379 Msa0463490:CDS 30.0%
AAACAAAGAAGCAACCATAA+GGG - chr3_3:62831446-62831465 None:intergenic 30.0%
!! TTCTTTGTTTGGAAGCATTA+GGG + chr3_3:62826400-62826419 Msa0463490:CDS 30.0%
CATCATCATTCAAACAAACA+TGG + chr3_3:62831489-62831508 Msa0463490:CDS 30.0%
AAACATGGTTAATGTGAACA+TGG + chr3_3:62826445-62826464 Msa0463490:CDS 30.0%
GAGCTTAACAATCTCAAATT+TGG - chr3_3:62831587-62831606 None:intergenic 30.0%
CTGCTTGATTATTTCATCAA+GGG - chr3_3:62831638-62831657 None:intergenic 30.0%
TCTGCTTGATTATTTCATCA+AGG - chr3_3:62831639-62831658 None:intergenic 30.0%
!!! AATTTTGGTGCCTGATTTAA+AGG + chr3_3:62831660-62831679 Msa0463490:CDS 30.0%
GCTTCTAATTCCTTTAAATC+AGG - chr3_3:62831673-62831692 None:intergenic 30.0%
TCATTGCCTGATATAAACAA+TGG + chr3_3:62826668-62826687 Msa0463490:CDS 30.0%
! GGTGTAGAAACATTTGAAAT+TGG - chr3_3:62832126-62832145 None:intergenic 30.0%
CACATGTAATTTCCATTCTT+AGG - chr3_3:62827121-62827140 None:intergenic 30.0%
CTAAGAATGGAAATTACATG+TGG + chr3_3:62827119-62827138 Msa0463490:CDS 30.0%
TGAAAAATTCTTTGAGTGCA+AGG + chr3_3:62832238-62832257 Msa0463490:CDS 30.0%
GAAAAATTCTTTGAGTGCAA+GGG + chr3_3:62832239-62832258 Msa0463490:CDS 30.0%
AAGGGATTTGTATCAAGAAA+TGG + chr3_3:62827198-62827217 Msa0463490:CDS 30.0%
CTCATAGATTGGAATTGATT+AGG - chr3_3:62832318-62832337 None:intergenic 30.0%
ATCAATTCCAATCTATGAGT+AGG + chr3_3:62832319-62832338 Msa0463490:CDS 30.0%
! TATGCTGATGATTTTCTCAT+AGG - chr3_3:62832411-62832430 None:intergenic 30.0%
ATGAGAAAATCATCAGCATA+TGG + chr3_3:62832411-62832430 Msa0463490:CDS 30.0%
TGAGAAAATCATCAGCATAT+GGG + chr3_3:62832412-62832431 Msa0463490:CDS 30.0%
AGATTGGGTTTCAAATGATT+GGG + chr3_3:62832584-62832603 Msa0463490:CDS 30.0%
! TTGGAAAAATCTGCTTCTTT+TGG + chr3_3:62832621-62832640 Msa0463490:CDS 30.0%
AAATATCTCAGAATTCTCAG+AGG - chr3_3:62827689-62827708 None:intergenic 30.0%
!! TCTGAGAATTCTGAGATATT+TGG + chr3_3:62827688-62827707 Msa0463490:CDS 30.0%
CAAAAGGGAAGTAGAAGAAA+AGG + chr3_3:62826286-62826305 Msa0463490:CDS 35.0%
AAAGGGCTATGATATCAATG+AGG + chr3_3:62826304-62826323 Msa0463490:CDS 35.0%
!! CTTCTTTGTTTGGAAGCATT+AGG + chr3_3:62826399-62826418 Msa0463490:CDS 35.0%
GTTAATGTGAACATGGCAAT+TGG + chr3_3:62826452-62826471 Msa0463490:CDS 35.0%
GAAGTTGAGAAGAAAGATTC+AGG + chr3_3:62826629-62826648 Msa0463490:CDS 35.0%
CAGCTATAAGGATACTTCTT+TGG - chr3_3:62826818-62826837 None:intergenic 35.0%
ATTGGCAAAGATTCTTGTGA+AGG - chr3_3:62827049-62827068 None:intergenic 35.0%
! TGAAAAATGCTTTGAGTGCA+AGG + chr3_3:62827179-62827198 Msa0463490:CDS 35.0%
! GAAAAATGCTTTGAGTGCAA+GGG + chr3_3:62827180-62827199 Msa0463490:CDS 35.0%
! CTTGAACATGGTTCCTATTT+TGG - chr3_3:62827303-62827322 None:intergenic 35.0%
! GATGAAACAGTGTTGTTGAA+TGG - chr3_3:62827334-62827353 None:intergenic 35.0%
! TATGCTGATGGTTTTCTCAT+AGG - chr3_3:62827358-62827377 None:intergenic 35.0%
ATGAGAAAACCATCAGCATA+TGG + chr3_3:62827358-62827377 Msa0463490:CDS 35.0%
GAATCAAATCCATATGCTGA+TGG - chr3_3:62827370-62827389 None:intergenic 35.0%
ATTTGATTCATCAGCTGCTA+TGG + chr3_3:62827381-62827400 Msa0463490:CDS 35.0%
ATAACCAGAAGTTATCACCA+TGG + chr3_3:62827737-62827756 Msa0463490:CDS 35.0%
TAACCAGAAGTTATCACCAT+GGG + chr3_3:62827738-62827757 Msa0463490:CDS 35.0%
GTTGCCAAGAAAAAAAGTTC+AGG + chr3_3:62827902-62827921 Msa0463490:intron 35.0%
GGTACGAATCTACTAGTATA+TGG + chr3_3:62827952-62827971 Msa0463490:intron 35.0%
GGAATCATATAAACTCCATG+TGG - chr3_3:62828006-62828025 None:intergenic 35.0%
ATAAAAAGGCCTTAGGATTG+TGG + chr3_3:62828107-62828126 Msa0463490:intron 35.0%
ATGATCAAACCACAATCCTA+AGG - chr3_3:62828119-62828138 None:intergenic 35.0%
TGTTTAAGTCTTGGGATTGT+TGG - chr3_3:62828511-62828530 None:intergenic 35.0%
! GAGTAGACTTGTTTAAGTCT+TGG - chr3_3:62828520-62828539 None:intergenic 35.0%
AGTTTACAAGCATTCCAAGA+TGG + chr3_3:62828727-62828746 Msa0463490:intron 35.0%
TCGGATTACAAGGCAATAAT+GGG + chr3_3:62828806-62828825 Msa0463490:intron 35.0%
TGCTAAAACTGATCAACTGA+AGG + chr3_3:62828919-62828938 Msa0463490:intron 35.0%
GCTAAAACTGATCAACTGAA+GGG + chr3_3:62828920-62828939 Msa0463490:intron 35.0%
ATCACCGTAACACTTGAAAA+AGG + chr3_3:62829066-62829085 Msa0463490:intron 35.0%
AGGAAAGAGTTGAAGAAGTT+TGG + chr3_3:62829306-62829325 Msa0463490:intron 35.0%
TTGATGTAGCTTAGTAGCTT+CGG - chr3_3:62829532-62829551 None:intergenic 35.0%
!! GAATCAAGGCTTGTTGATAA+GGG - chr3_3:62829555-62829574 None:intergenic 35.0%
TAAGTGGTACAAAGGAATCA+AGG - chr3_3:62829569-62829588 None:intergenic 35.0%
TTGATTCCTTTGTACCACTT+AGG + chr3_3:62829568-62829587 Msa0463490:intron 35.0%
TTAGTACCTAAGTGGTACAA+AGG - chr3_3:62829577-62829596 None:intergenic 35.0%
GTCATTGAAGTACAATCCTA+AGG + chr3_3:62829862-62829881 Msa0463490:intron 35.0%
! CTCCCCATAACATATTTTCA+AGG - chr3_3:62829899-62829918 None:intergenic 35.0%
ACTAAATGAACCACACCTAT+TGG + chr3_3:62829963-62829982 Msa0463490:intron 35.0%
! CAAAGAGAAGGTATGTACAT+GGG - chr3_3:62830286-62830305 None:intergenic 35.0%
! TCAAAGAGAAGGTATGTACA+TGG - chr3_3:62830287-62830306 None:intergenic 35.0%
! CCCAAGTATTTTCAAAGAGA+AGG - chr3_3:62830298-62830317 None:intergenic 35.0%
ACTAGCAATTCCAACATGTT+TGG + chr3_3:62830397-62830416 Msa0463490:intron 35.0%
CTCATCTCCAAAAGCAATTT+CGG + chr3_3:62830441-62830460 Msa0463490:intron 35.0%
AGAGAAAATGAGGAGAACTT+TGG - chr3_3:62830660-62830679 None:intergenic 35.0%
CATTGATGAGAAGAAGAGAA+GGG - chr3_3:62830839-62830858 None:intergenic 35.0%
TCATTGATGAGAAGAAGAGA+AGG - chr3_3:62830840-62830859 None:intergenic 35.0%
TAGTATAGTGTCCTAGTTTC+CGG - chr3_3:62830876-62830895 None:intergenic 35.0%
CACATTGAATGACTGAAGAT+AGG + chr3_3:62830939-62830958 Msa0463490:intron 35.0%
ATGTTTATAAGAAACGCGCA+TGG + chr3_3:62830991-62831010 Msa0463490:intron 35.0%
TGTTTATAAGAAACGCGCAT+GGG + chr3_3:62830992-62831011 Msa0463490:intron 35.0%
TCAAGTTTCCAAAGCTTAAG+TGG - chr3_3:62831020-62831039 None:intergenic 35.0%
CAAGTCAAAGAAGATTGAGT+AGG + chr3_3:62831055-62831074 Msa0463490:intron 35.0%
GACAAAAAGAAGAACAAGAG+AGG - chr3_3:62831117-62831136 None:intergenic 35.0%
! TATAATGTGAGGCTTTGTAG+TGG - chr3_3:62831144-62831163 None:intergenic 35.0%
ACACAAATAGCCACTCAATA+TGG + chr3_3:62831258-62831277 Msa0463490:intron 35.0%
CAAAAGGGAAGTAGAAGAAA+AGG + chr3_3:62826286-62826305 Msa0463490:CDS 35.0%
ATGTAAATGAGGCAGGTTAT+TGG + chr3_3:62831371-62831390 Msa0463490:CDS 35.0%
AACAAAGAAGCAACCATAAG+GGG - chr3_3:62831445-62831464 None:intergenic 35.0%
CAAACAAAGAAGCAACCATA+AGG - chr3_3:62831447-62831466 None:intergenic 35.0%
CTTATGGTTGCTTCTTTGTT+TGG + chr3_3:62831445-62831464 Msa0463490:CDS 35.0%
!! CTTCTTTGTTTGGAAGCATT+AGG + chr3_3:62826399-62826418 Msa0463490:CDS 35.0%
GTTAATGTGAACATGGCAAT+TGG + chr3_3:62826452-62826471 Msa0463490:CDS 35.0%
CAGCTATAAGGATACTTCTT+TGG - chr3_3:62826818-62826837 None:intergenic 35.0%
AATCTCATCTTTACAAAGCC+TGG - chr3_3:62826945-62826964 None:intergenic 35.0%
! GGCTTTGTAAAGATGAGATT+AGG + chr3_3:62826945-62826964 Msa0463490:CDS 35.0%
ATTGGCAAAGATTCTTGTGA+AGG - chr3_3:62827049-62827068 None:intergenic 35.0%
!! GAATTTTTCAGCTGCAATGA+AGG - chr3_3:62832228-62832247 None:intergenic 35.0%
GCATTGAAATACCATGTAAC+AGG - chr3_3:62832284-62832303 None:intergenic 35.0%
TGGAATTGATTAGGAGTTGA+AGG - chr3_3:62832309-62832328 None:intergenic 35.0%
!! ATGGATAACTTGCTTGAACA+TGG - chr3_3:62832368-62832387 None:intergenic 35.0%
GATGAAACAATGCTGTTGAA+TGG - chr3_3:62832387-62832406 None:intergenic 35.0%
CAGATTGGGTTTCAAATGAT+TGG + chr3_3:62832583-62832602 Msa0463490:CDS 35.0%
ATAAACAGAAGTTATCCCCA+TGG + chr3_3:62832790-62832809 Msa0463490:CDS 35.0%
GCTATGATATCAATGAGGCA+GGG + chr3_3:62826309-62826328 Msa0463490:CDS 40.0%
! ATATCAATGAGGCAGGGTTT+TGG + chr3_3:62826315-62826334 Msa0463490:intron 40.0%
!! TTTGTTTGGAAGCATTAGGG+TGG + chr3_3:62826403-62826422 Msa0463490:CDS 40.0%
! GTTAAACTCTTGGTTGATGC+TGG + chr3_3:62826539-62826558 Msa0463490:CDS 40.0%
! TCAAAGTGAAGACTTGCTCA+AGG + chr3_3:62826726-62826745 Msa0463490:CDS 40.0%
! CAAAGTGAAGACTTGCTCAA+GGG + chr3_3:62826727-62826746 Msa0463490:CDS 40.0%
! AAAGTGAAGACTTGCTCAAG+GGG + chr3_3:62826728-62826747 Msa0463490:CDS 40.0%
AGTGTCCATTTGTTCATCCA+GGG + chr3_3:62826771-62826790 Msa0463490:CDS 40.0%
ACTCACATGCATCTTTCTTC+TGG - chr3_3:62826874-62826893 None:intergenic 40.0%
GATGCATGTGAGTATTCACA+TGG + chr3_3:62826881-62826900 Msa0463490:CDS 40.0%
ATCCTGCACAATACAGAACA+AGG + chr3_3:62826924-62826943 Msa0463490:CDS 40.0%
CACACAAACATGAAGAGTTG+AGG + chr3_3:62826993-62827012 Msa0463490:CDS 40.0%
! GAACCAGTAGAAGCATACAA+AGG - chr3_3:62827019-62827038 None:intergenic 40.0%
! GCTGATTCATCTCCTAAGAA+TGG + chr3_3:62827106-62827125 Msa0463490:CDS 40.0%
!! TTTTTCAGCTGCAATGAAGG+TGG - chr3_3:62827166-62827185 None:intergenic 40.0%
!! GCATTTTTCAGCTGCAATGA+AGG - chr3_3:62827169-62827188 None:intergenic 40.0%
GTCATAGATTGCAATCGAGT+AGG - chr3_3:62827259-62827278 None:intergenic 40.0%
GGTTTCAGCTGAACCAAAAT+AGG + chr3_3:62827287-62827306 Msa0463490:intron 40.0%
! GACACGAAGCCAAAGTTTTA+TGG + chr3_3:62827441-62827460 Msa0463490:CDS 40.0%
!! AGCCAAAGTTTTATGGATCG+CGG + chr3_3:62827448-62827467 Msa0463490:CDS 40.0%
GTTCATCCTACTGTTGGATT+CGG - chr3_3:62827500-62827519 None:intergenic 40.0%
! TTCAGGTTAGTCCAGAGAAT+TGG + chr3_3:62827919-62827938 Msa0463490:intron 40.0%
CAATATGCTGTCCAATTCTC+TGG - chr3_3:62827933-62827952 None:intergenic 40.0%
CAGAGAATTGGACAGCATAT+TGG + chr3_3:62827931-62827950 Msa0463490:intron 40.0%
ACATCAAACGAATGACCGAA+AGG - chr3_3:62828388-62828407 None:intergenic 40.0%
TCGGTCATTCGTTTGATGTT+TGG + chr3_3:62828389-62828408 Msa0463490:intron 40.0%
! AGTCTAGACATGGGTTGAAT+AGG + chr3_3:62828466-62828485 Msa0463490:intron 40.0%
! AGACATGGGTTGAATAGGAT+TGG + chr3_3:62828471-62828490 Msa0463490:intron 40.0%
TCATATCAGAGTTGCCATCT+TGG - chr3_3:62828744-62828763 None:intergenic 40.0%
ATAGCCTATAACCTCAGACA+AGG + chr3_3:62828775-62828794 Msa0463490:intron 40.0%
! AATGCCTTGTCTGAGGTTAT+AGG - chr3_3:62828782-62828801 None:intergenic 40.0%
! CTCAGACAAGGCATTAAACT+CGG + chr3_3:62828787-62828806 Msa0463490:intron 40.0%
GGCATTAAACTCGGATTACA+AGG + chr3_3:62828796-62828815 Msa0463490:intron 40.0%
CTCGGATTACAAGGCAATAA+TGG + chr3_3:62828805-62828824 Msa0463490:intron 40.0%
!!! AGCAGTTTTGAAACTAGGCA+CGG - chr3_3:62828903-62828922 None:intergenic 40.0%
AGTTGCTTCGAACAAAAGCA+TGG - chr3_3:62829132-62829151 None:intergenic 40.0%
TGATGTAGCTTAGTAGCTTC+GGG - chr3_3:62829531-62829550 None:intergenic 40.0%
!! GGAATCAAGGCTTGTTGATA+AGG - chr3_3:62829556-62829575 None:intergenic 40.0%
CAAGGAGAGTAAAGAACCTT+AGG - chr3_3:62829881-62829900 None:intergenic 40.0%
AGAAGCTGAACCAAACATGT+TGG - chr3_3:62830410-62830429 None:intergenic 40.0%
! GCTTCAACCGAAATTGCTTT+TGG - chr3_3:62830451-62830470 None:intergenic 40.0%
CAATGAAGAGAATTCACTGC+CGG + chr3_3:62830854-62830873 Msa0463490:intron 40.0%
TGAAGGTGAGTGAGAATATG+AGG - chr3_3:62831182-62831201 None:intergenic 40.0%
GGTTATGATGTAAATGAGGC+AGG + chr3_3:62831364-62831383 Msa0463490:CDS 40.0%
TGAAAAGAGAACACCCCTTA+TGG + chr3_3:62826373-62826392 Msa0463490:CDS 40.0%
!! TTTGTTTGGAAGCATTAGGG+TGG + chr3_3:62826403-62826422 Msa0463490:CDS 40.0%
GAAGCTGAGAAGAAAGATTC+AGG + chr3_3:62831688-62831707 Msa0463490:CDS 40.0%
! TCAAAGTGAAGACTTGCTCA+AGG + chr3_3:62826726-62826745 Msa0463490:CDS 40.0%
! CAAAGTGAAGACTTGCTCAA+GGG + chr3_3:62826727-62826746 Msa0463490:CDS 40.0%
! AAAGTGAAGACTTGCTCAAG+GGG + chr3_3:62826728-62826747 Msa0463490:CDS 40.0%
TGGATGAACAAATGGACACT+CGG - chr3_3:62826771-62826790 None:intergenic 40.0%
AGTGTCCATTTGTTCATCCA+GGG + chr3_3:62826771-62826790 Msa0463490:CDS 40.0%
ACTCACATGCATCTTTCTTC+TGG - chr3_3:62826874-62826893 None:intergenic 40.0%
GATGCATGTGAGTATTCACA+TGG + chr3_3:62826881-62826900 Msa0463490:CDS 40.0%
CACACAAACATGAAGAGTTG+AGG + chr3_3:62826993-62827012 Msa0463490:CDS 40.0%
! GAACCAGTAGAAGCATACAA+AGG - chr3_3:62827019-62827038 None:intergenic 40.0%
! GCTGATTCATCTCCTAAGAA+TGG + chr3_3:62827106-62827125 Msa0463490:CDS 40.0%
!! TTTTTCAGCTGCAATGAAGG+TGG - chr3_3:62827166-62827185 None:intergenic 40.0%
CAAGAAATGGACCTGTTACA+TGG + chr3_3:62832270-62832289 Msa0463490:CDS 40.0%
GCTGAAACCTACTCATAGAT+TGG - chr3_3:62832329-62832348 None:intergenic 40.0%
! CTTGAACATGGTTCCTGTTT+TGG - chr3_3:62832356-62832375 None:intergenic 40.0%
GTTTGATTCATCAGCTGCTA+TGG + chr3_3:62832434-62832453 Msa0463490:CDS 40.0%
GTTCATCCTACTGTTCGATT+CGG - chr3_3:62832553-62832572 None:intergenic 40.0%
! TACAATTTGCTCTGTCCATG+GGG - chr3_3:62832808-62832827 None:intergenic 40.0%
! CTACAATTTGCTCTGTCCAT+GGG - chr3_3:62832809-62832828 None:intergenic 40.0%
GGCTATGATATCAATGAGGC+AGG + chr3_3:62826308-62826327 Msa0463490:CDS 45.0%
! GCATTACATTGTGCTGTTGC+TGG + chr3_3:62826491-62826510 Msa0463490:CDS 45.0%
! TTACATTGTGCTGTTGCTGG+TGG + chr3_3:62826494-62826513 Msa0463490:CDS 45.0%
CAAGGGGTTACACTCATGAT+TGG + chr3_3:62826744-62826763 Msa0463490:CDS 45.0%
GAGTGTCCATTTGTTCATCC+AGG + chr3_3:62826770-62826789 Msa0463490:CDS 45.0%
GTGTCCATTTGTTCATCCAG+GGG + chr3_3:62826772-62826791 Msa0463490:CDS 45.0%
TTCTCCCCTGGATGAACAAA+TGG - chr3_3:62826779-62826798 None:intergenic 45.0%
!! AGCCTTGTTCTGTATTGTGC+AGG - chr3_3:62826929-62826948 None:intergenic 45.0%
AGGCCTTTGTATGCTTCTAC+TGG + chr3_3:62827013-62827032 Msa0463490:CDS 45.0%
AACACCACCTATGTCTCCAT+TGG + chr3_3:62827081-62827100 Msa0463490:CDS 45.0%
TCAGCTACCAATGGAGACAT+AGG - chr3_3:62827091-62827110 None:intergenic 45.0%
GGAGATGAATCAGCTACCAA+TGG - chr3_3:62827100-62827119 None:intergenic 45.0%
AATCGAGTAGGAGTTGAAGG+TGG - chr3_3:62827247-62827266 None:intergenic 45.0%
TGCAATCGAGTAGGAGTTGA+AGG - chr3_3:62827250-62827269 None:intergenic 45.0%
CTGCAGCAGTGAAGAATTCA+AGG + chr3_3:62827404-62827423 Msa0463490:CDS 45.0%
CACCGCGATCCATAAAACTT+TGG - chr3_3:62827453-62827472 None:intergenic 45.0%
TCCAACAGTAGGATGAACTC+TGG + chr3_3:62827502-62827521 Msa0463490:CDS 45.0%
ACCAGAGTTCATCCTACTGT+TGG - chr3_3:62827506-62827525 None:intergenic 45.0%
TGAACTCTGGTCACTCAGAT+TGG + chr3_3:62827515-62827534 Msa0463490:intron 45.0%
ACATCCGGTTCAACATGTTC+TGG - chr3_3:62827634-62827653 None:intergenic 45.0%
GGTTCATTCGCTTGTTCAAG+AGG + chr3_3:62827660-62827679 Msa0463490:CDS 45.0%
!! CTGAGATATTTGGTGCTGAG+CGG + chr3_3:62827698-62827717 Msa0463490:CDS 45.0%
CGAGTTTAATGCCTTGTCTG+AGG - chr3_3:62828789-62828808 None:intergenic 45.0%
ATGTAGCTTAGTAGCTTCGG+GGG - chr3_3:62829529-62829548 None:intergenic 45.0%
GATGTAGCTTAGTAGCTTCG+GGG - chr3_3:62829530-62829549 None:intergenic 45.0%
GATTGAGAGAGAGAGAGAGA+GGG - chr3_3:62829778-62829797 None:intergenic 45.0%
AGATTGAGAGAGAGAGAGAG+AGG - chr3_3:62829779-62829798 None:intergenic 45.0%
AGAATTCACTGCCGGAAACT+AGG + chr3_3:62830862-62830881 Msa0463490:intron 45.0%
! TTCGCACGCTGACCTTTTAT+TGG - chr3_3:62830919-62830938 None:intergenic 45.0%
AGATAGGAAGACACCAACGT+AGG + chr3_3:62830955-62830974 Msa0463490:intron 45.0%
CATGGGTTCCACTTAAGCTT+TGG + chr3_3:62831009-62831028 Msa0463490:intron 45.0%
! GCATTACATTGTGCTGTTGC+TGG + chr3_3:62826491-62826510 Msa0463490:CDS 45.0%
! TTACATTGTGCTGTTGCTGG+TGG + chr3_3:62826494-62826513 Msa0463490:CDS 45.0%
GTTAAGCTCTTGCTTGATGC+TGG + chr3_3:62831598-62831617 Msa0463490:CDS 45.0%
CAAGGGGTTACACTCATGAT+TGG + chr3_3:62826744-62826763 Msa0463490:CDS 45.0%
GAGTGTCCATTTGTTCATCC+AGG + chr3_3:62826770-62826789 Msa0463490:CDS 45.0%
GTGTCCATTTGTTCATCCAG+GGG + chr3_3:62826772-62826791 Msa0463490:CDS 45.0%
TTCTCCCCTGGATGAACAAA+TGG - chr3_3:62826779-62826798 None:intergenic 45.0%
ATCCTGCACAATACAGAACC+AGG + chr3_3:62831983-62832002 Msa0463490:CDS 45.0%
AGGCCTTTGTATGCTTCTAC+TGG + chr3_3:62827013-62827032 Msa0463490:CDS 45.0%
TACACCACCTATGTCTCCAT+TGG + chr3_3:62832140-62832159 Msa0463490:CDS 45.0%
TCAGCTACCAATGGAGACAT+AGG - chr3_3:62827091-62827110 None:intergenic 45.0%
GGAGATGAATCAGCTACCAA+TGG - chr3_3:62827100-62827119 None:intergenic 45.0%
GGTTTCAGCAGAACCAAAAC+AGG + chr3_3:62832340-62832359 Msa0463490:CDS 45.0%
CTGCAGCAGTGATGAATTCA+AGG + chr3_3:62832457-62832476 Msa0463490:CDS 45.0%
GACACGAAGCCAAAGCTTTA+TGG + chr3_3:62832494-62832513 Msa0463490:CDS 45.0%
! AGCCAAAGCTTTATGGATCG+CGG + chr3_3:62832501-62832520 Msa0463490:CDS 45.0%
GGTGTGTCAAGACACCATAT+CGG + chr3_3:62832522-62832541 Msa0463490:CDS 45.0%
TCGAACAGTAGGATGAACTC+TGG + chr3_3:62832555-62832574 Msa0463490:CDS 45.0%
TGAACTCTGGTCTGTCAGAT+TGG + chr3_3:62832568-62832587 Msa0463490:CDS 45.0%
GAACTCTGGTCTGTCAGATT+GGG + chr3_3:62832569-62832588 Msa0463490:CDS 45.0%
TTGGGATGAGCTGCATAAGT+TGG + chr3_3:62827549-62827568 Msa0463490:CDS 45.0%
GGTTCATTCGCTTGTTCAAG+AGG + chr3_3:62827660-62827679 Msa0463490:CDS 45.0%
!! CTGAGATATTTGGTGCTGAG+AGG + chr3_3:62827698-62827717 Msa0463490:CDS 45.0%
! GCTACAATTTGCTCTGTCCA+TGG - chr3_3:62832810-62832829 None:intergenic 45.0%
!!! AAATTTAGAATATTATAAAA+AGG + chr3_3:62828093-62828112 Msa0463490:intron 5.0%
!!! TATATATATAAATTTGTTTT+AGG + chr3_3:62829409-62829428 Msa0463490:intron 5.0%
!!! ATATATATAAATTTGTTTTA+GGG + chr3_3:62829410-62829429 Msa0463490:intron 5.0%
!!! TAAATTTTTAATGTAAAAAT+TGG - chr3_3:62830053-62830072 None:intergenic 5.0%
TTCATCCAGGGGAGAATGCT+AGG + chr3_3:62826783-62826802 Msa0463490:CDS 50.0%
ATGTCCCTTTGCGAAACTCG+GGG - chr3_3:62826850-62826869 None:intergenic 50.0%
CATGTCCCTTTGCGAAACTC+GGG - chr3_3:62826851-62826870 None:intergenic 50.0%
GCATGTCCCTTTGCGAAACT+CGG - chr3_3:62826852-62826871 None:intergenic 50.0%
GCTACCAATGGAGACATAGG+TGG - chr3_3:62827088-62827107 None:intergenic 50.0%
! ACTTTGGCTTCGTGTCGCAA+AGG - chr3_3:62827437-62827456 None:intergenic 50.0%
!! TGGATTCGGAAGCACTGATG+TGG - chr3_3:62827486-62827505 None:intergenic 50.0%
GTGCTTCCGAATCCAACAGT+AGG + chr3_3:62827491-62827510 Msa0463490:CDS 50.0%
ACGGCCAGAACATGTTGAAC+CGG + chr3_3:62827627-62827646 Msa0463490:CDS 50.0%
ATGTTGAACCGGATGTCTCG+TGG + chr3_3:62827638-62827657 Msa0463490:CDS 50.0%
TGTTGAACCGGATGTCTCGT+GGG + chr3_3:62827639-62827658 Msa0463490:CDS 50.0%
GAATGAACCCACGAGACATC+CGG - chr3_3:62827649-62827668 None:intergenic 50.0%
CTGCCCATGGTGATAACTTC+TGG - chr3_3:62827744-62827763 None:intergenic 50.0%
GAGCACGACCAGTGAGAAAT+GGG + chr3_3:62829020-62829039 Msa0463490:intron 50.0%
AGCACGACCAGTGAGAAATG+GGG + chr3_3:62829021-62829040 Msa0463490:intron 50.0%
AGTGAGAAATGGGGCAACAC+CGG + chr3_3:62829030-62829049 Msa0463490:intron 50.0%
GGTGATGCCTCATTTCTCAC+CGG - chr3_3:62829052-62829071 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - chr3_3:62829726-62829745 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr3_3:62829725-62829744 None:intergenic 50.0%
TGTTGGTCACGTTCCTACGT+TGG - chr3_3:62830971-62830990 None:intergenic 50.0%
TTCATCCAGGGGAGAATGCT+AGG + chr3_3:62826783-62826802 Msa0463490:CDS 50.0%
ATGTCCCTTTGCGAAACTCG+GGG - chr3_3:62826850-62826869 None:intergenic 50.0%
CATGTCCCTTTGCGAAACTC+GGG - chr3_3:62826851-62826870 None:intergenic 50.0%
GCATGTCCCTTTGCGAAACT+CGG - chr3_3:62826852-62826871 None:intergenic 50.0%
!! AGCCTGGTTCTGTATTGTGC+AGG - chr3_3:62831988-62832007 None:intergenic 50.0%
GCTACCAATGGAGACATAGG+TGG - chr3_3:62827088-62827107 None:intergenic 50.0%
! GCTTTGGCTTCGTGTCACAA+AGG - chr3_3:62832490-62832509 None:intergenic 50.0%
CACCGCGATCCATAAAGCTT+TGG - chr3_3:62832506-62832525 None:intergenic 50.0%
!! TCGATTCGGAAGCACCGATA+TGG - chr3_3:62832539-62832558 None:intergenic 50.0%
GTGCTTCCGAATCGAACAGT+AGG + chr3_3:62832544-62832563 Msa0463490:CDS 50.0%
!! ACATCTGGTTCGGCATGTTG+AGG - chr3_3:62832687-62832706 None:intergenic 50.0%
AACCCACGAGACATCTGGTT+CGG - chr3_3:62832697-62832716 None:intergenic 50.0%
GAATGAACCCACGAGACATC+TGG - chr3_3:62827649-62827668 None:intergenic 50.0%
CTTCTCCTAGCATTCTCCCC+TGG - chr3_3:62826791-62826810 None:intergenic 55.0%
GGGCACGGAACACAGCTATA+AGG - chr3_3:62826830-62826849 None:intergenic 55.0%
TATGGTAGTTGCTTCGCCCG+TGG + chr3_3:62827603-62827622 Msa0463490:CDS 55.0%
AACATGTTCTGGCCGTGCCA+CGG - chr3_3:62827623-62827642 None:intergenic 55.0%
ATCACCATGGGCAGAGCAGA+TGG + chr3_3:62827750-62827769 Msa0463490:CDS 55.0%
TTTCTCACTGGTCGTGCTCC+TGG - chr3_3:62829019-62829038 None:intergenic 55.0%
GGAGCACGACCAGTGAGAAA+TGG + chr3_3:62829019-62829038 Msa0463490:intron 55.0%
! GGTGTTGCCCCATTTCTCAC+TGG - chr3_3:62829031-62829050 None:intergenic 55.0%
GGCAACACCGGTGAGAAATG+AGG + chr3_3:62829042-62829061 Msa0463490:intron 55.0%
TTAGTAGCTTCGGGGGTTGG+GGG - chr3_3:62829522-62829541 None:intergenic 55.0%
CTTAGTAGCTTCGGGGGTTG+GGG - chr3_3:62829523-62829542 None:intergenic 55.0%
GCTTAGTAGCTTCGGGGGTT+GGG - chr3_3:62829524-62829543 None:intergenic 55.0%
AGCTTAGTAGCTTCGGGGGT+TGG - chr3_3:62829525-62829544 None:intergenic 55.0%
CTTCTCCTAGCATTCTCCCC+TGG - chr3_3:62826791-62826810 None:intergenic 55.0%
GGGCACGGAACACAGCTATA+AGG - chr3_3:62826830-62826849 None:intergenic 55.0%
ATGCCGAACCAGATGTCTCG+TGG + chr3_3:62832691-62832710 Msa0463490:CDS 55.0%
TGCCGAACCAGATGTCTCGT+GGG + chr3_3:62832692-62832711 Msa0463490:CDS 55.0%
CCTTTGCGAAACTCGGGGCA+CGG - chr3_3:62826845-62826864 None:intergenic 60.0%
CGTGCCCCGAGTTTCGCAAA+GGG + chr3_3:62826843-62826862 Msa0463490:CDS 60.0%
TAGTTGCTTCGCCCGTGGCA+CGG + chr3_3:62827608-62827627 Msa0463490:CDS 60.0%
ACATGTTCTGGCCGTGCCAC+GGG - chr3_3:62827622-62827641 None:intergenic 60.0%
GCTACCATCTGCTCTGCCCA+TGG - chr3_3:62827757-62827776 None:intergenic 60.0%
GACCTTGCGCCCCATAAGCA+CGG - chr3_3:62828955-62828974 None:intergenic 60.0%
ACAGCTGCTCGTGCGTGGAT+AGG - chr3_3:62828994-62829013 None:intergenic 60.0%
TGGAAACAGCTGCTCGTGCG+TGG - chr3_3:62828999-62829018 None:intergenic 60.0%
! ACGCACGAGCAGCTGTTTCC+AGG + chr3_3:62828998-62829017 Msa0463490:intron 60.0%
CCTTTGCGAAACTCGGGGCA+CGG - chr3_3:62826845-62826864 None:intergenic 60.0%
CGTGCCCCGAGTTTCGCAAA+GGG + chr3_3:62826843-62826862 Msa0463490:CDS 60.0%
GCATGTTGAGGCCGTGCAAC+GGG - chr3_3:62832675-62832694 None:intergenic 60.0%
GGCATGTTGAGGCCGTGCAA+CGG - chr3_3:62832676-62832695 None:intergenic 60.0%
CCGTGCCCCGAGTTTCGCAA+AGG + chr3_3:62826842-62826861 Msa0463490:CDS 65.0%
GCGCGCACGACCGTGCTTAT+GGG + chr3_3:62828942-62828961 Msa0463490:intron 65.0%
CGCGCACGACCGTGCTTATG+GGG + chr3_3:62828943-62828962 Msa0463490:intron 65.0%
GACCGTGCTTATGGGGCGCA+AGG + chr3_3:62828950-62828969 Msa0463490:intron 65.0%
CCGTGCCCCGAGTTTCGCAA+AGG + chr3_3:62826842-62826861 Msa0463490:CDS 65.0%
! CTGCTGCTTCGCCCGTTGCA+CGG + chr3_3:62832661-62832680 Msa0463490:CDS 65.0%
GGCGCGCACGACCGTGCTTA+TGG + chr3_3:62828941-62828960 Msa0463490:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 62826221 62832833 62826221 ID=Msa0463490;Name=Msa0463490
chr3_3 mRNA 62826221 62832833 62826221 ID=Msa0463490-mRNA-1;Parent=Msa0463490;Name=Msa0463490-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|0|0|8|0|993
chr3_3 exon 62826221 62826330 62826221 ID=Msa0463490-mRNA-1:exon:13567;Parent=Msa0463490-mRNA-1
chr3_3 exon 62826346 62826568 62826346 ID=Msa0463490-mRNA-1:exon:13568;Parent=Msa0463490-mRNA-1
chr3_3 exon 62826599 62826822 62826599 ID=Msa0463490-mRNA-1:exon:13569;Parent=Msa0463490-mRNA-1
chr3_3 exon 62826835 62827034 62826835 ID=Msa0463490-mRNA-1:exon:13570;Parent=Msa0463490-mRNA-1
chr3_3 exon 62827041 62827224 62827041 ID=Msa0463490-mRNA-1:exon:13571;Parent=Msa0463490-mRNA-1
chr3_3 exon 62827288 62827523 62827288 ID=Msa0463490-mRNA-1:exon:13572;Parent=Msa0463490-mRNA-1
chr3_3 exon 62827533 62827771 62827533 ID=Msa0463490-mRNA-1:exon:13573;Parent=Msa0463490-mRNA-1
chr3_3 exon 62831268 62832833 62831268 ID=Msa0463490-mRNA-1:exon:13574;Parent=Msa0463490-mRNA-1
chr3_3 CDS 62826221 62826330 62826221 ID=Msa0463490-mRNA-1:cds;Parent=Msa0463490-mRNA-1
chr3_3 CDS 62826346 62826568 62826346 ID=Msa0463490-mRNA-1:cds;Parent=Msa0463490-mRNA-1
chr3_3 CDS 62826599 62826822 62826599 ID=Msa0463490-mRNA-1:cds;Parent=Msa0463490-mRNA-1
chr3_3 CDS 62826835 62827034 62826835 ID=Msa0463490-mRNA-1:cds;Parent=Msa0463490-mRNA-1
chr3_3 CDS 62827041 62827224 62827041 ID=Msa0463490-mRNA-1:cds;Parent=Msa0463490-mRNA-1
chr3_3 CDS 62827288 62827523 62827288 ID=Msa0463490-mRNA-1:cds;Parent=Msa0463490-mRNA-1
chr3_3 CDS 62827533 62827771 62827533 ID=Msa0463490-mRNA-1:cds;Parent=Msa0463490-mRNA-1
chr3_3 CDS 62831268 62832833 62831268 ID=Msa0463490-mRNA-1:cds;Parent=Msa0463490-mRNA-1
Gene Sequence

>Msa0463490

ATGGAAAACAAGTTCCAAAACTCAACTTTACTTGAATTATCAGCAATTGATGATATTGAAGCTTTCAAAAGGGAAGTAGAAGAAAAGGGCTATGATATCAATGAGGCAGGAAAAATAGGATCAAAGAAGATGTGTTATGAAAAGAGAACACCCCTTATGATTGCTTCTTTGTTTGGAAGCATTAGGGTGGTGAAATATATCATTGAAACAAACATGGTTAATGTGAACATGGCAATTGGTAGTGAAAATGTCACTGCATTACATTGTGCTGTTGCTGGTGGTTCTAAATCCAAATTTGAGATTGTTAAACTCTTGGTTGATGCTGGAGCAGATAATTTTCTAGTGCCTAAATCAAAAGAATTAGAAGTTGAGAAGAAAGATTCAGGATATGCTATTGATATATCATTGCCTGATATAAACAATGGTGTTTTTGTAACAGATGAATTTAGAATGTATAGTTTCAAAGTGAAGACTTGCTCAAGGGGTTACACTCATGATTGGACTGAGTGTCCATTTGTTCATCCAGGGGAGAATGCTAGGAGAAGAGATCCAAAGAACTGTGTTCCGTGCCCCGAGTTTCGCAAAGGGACATGCCAGAAGAAAGATGCATGTGAGTATTCACATGGTGTTTTTGAGTCTTTGCTTCATCCTGCACAATACAGAACAAGGCTTTGTAAAGATGAGATTAGATGTTCTAGAAAAGTGTGTTTCTTTGCACACAAACATGAAGAGTTGAGGCCTTTGTATGCTTCTACTGCTATGCCTTCACAAGAATCTTTGCCAATTTCAAATGTTTCAACACCACCTATGTCTCCATTGGTAGCTGATTCATCTCCTAAGAATGGAAATTACATGTGGAAGAATAAAATCAATCACAGTCCACCTTCATTGCAGCTGAAAAATGCTTTGAGTGCAAGGGATTTGTATCAAGAAATGGATTTGTTTCAGCTGAACCAAAATAGGAACCATGTTCAAGCAAATTATCCATTCAACAACACTGTTTCATCTCCTATGAGAAAACCATCAGCATATGGATTTGATTCATCAGCTGCTATGGCTGCAGCAGTGAAGAATTCAAGGTCTTCAGCCTTTGCGACACGAAGCCAAAGTTTTATGGATCGCGGTGTGTCAAGACGCCACATCAGTGCTTCCGAATCCAACAGTAGGATGAACTCTGATTGGATTTCAAATGATTGGGATGAGCTGCATAAGTTGAAAAAATCTGCTTCTTTTGGATTTAGAAATTCTATGGTAGTTGCTTCGCCCGTGGCACGGCCAGAACATGTTGAACCGGATGTCTCGTGGGTTCATTCGCTTGTTCAAGAGGTTTCCTCTGAGAATTCTGAGATATTTGGTGCTGAGCGGCTACATTATGATCTCTATAACCAGAAGTTATCACCATGGGCAGAGCAGATGCCACTCAATATGGAAAACAAGTTCCAAAACTCAGTTTTACTTGAATTATCAGCAATAGATGATATTGAAGCATTCAAAAGGGAAGTAGAAGAAAAGGGTTATGATGTAAATGAGGCAGGTTATTGGTATTGTAGAAAAATAGGATCAAAGAAAATGTGTTATGAAAAGAGAACACCCCTTATGGTTGCTTCTTTGTTTGGAAGCATTAGGGTGGTGAAATACATCATCATTCAAACAAACATGGTTAATGTGAACATGGCAATTGGTAGTGAAAATGTCACTGCATTACATTGTGCTGTTGCTGGTGGTTCTAAATCCAAATTTGAGATTGTTAAGCTCTTGCTTGATGCTGGTGCAGATGTTGATTCCCTTGATGAAATAATCAAGCAGAAAATTTTGGTGCCTGATTTAAAGGAATTAGAAGCTGAGAAGAAAGATTCAGGATATGCTATTGATATATCATTGCCTGATATAAACAATGGTGTTTTTGTAACAGATGAATTTAGAATGTATAGTTTCAAAGTGAAGACTTGCTCAAGGGGTTACACTCATGATTGGACCGAGTGTCCATTTGTTCATCCAGGGGAGAATGCTAGGAGAAGAGATCCAAAGAAGTATCCTTATAGCTGTGTTCCGTGCCCCGAGTTTCGCAAAGGGACATGCCAGAAGAAAGATGCATGTGAGTATTCACATGGTGTTTTTGAGTCTTTGCTTCATCCTGCACAATACAGAACCAGGCTTTGTAAAGATGAGATTAGGTGTACTAGAAAAGTGTGTTTCTTTGCACACAAACATGAAGAGTTGAGGCCTTTGTATGCTTCTACTGGTTCAGCTATGCCTTCACAAGAATCTTTGCCAATTTCAAATGTTTCTACACCACCTATGTCTCCATTGGTAGCTGATTCATCTCCTAAGAATGGAAATTACATGTGGAAGAATAAAATCAATCTCACTCCACCTTCATTGCAGCTGAAAAATTCTTTGAGTGCAAGGGATTTGTATCAAGAAATGGACCTGTTACATGGTATTTCAATGCAACCTTCAACTCCTAATCAATTCCAATCTATGAGTAGGTTTCAGCAGAACCAAAACAGGAACCATGTTCAAGCAAGTTATCCATTCAACAGCATTGTTTCATCTCCTATGAGAAAATCATCAGCATATGGGTTTGATTCATCAGCTGCTATGGCTGCAGCAGTGATGAATTCAAGGTCTTCAGCCTTTGTGACACGAAGCCAAAGCTTTATGGATCGCGGTGTGTCAAGACACCATATCGGTGCTTCCGAATCGAACAGTAGGATGAACTCTGGTCTGTCAGATTGGGTTTCAAATGATTGGGATGAGCTGCATAAGTTGGAAAAATCTGCTTCTTTTGGATTTAGAAATAATATGGCTGCTGCTTCGCCCGTTGCACGGCCTCAACATGCCGAACCAGATGTCTCGTGGGTTCATTCGCTTGTTCAAGAGGTTTCCTCTGAGAATTCTGAGATATTTGGTGCTGAGAGGCTACATTATGATCTCTATAAACAGAAGTTATCCCCATGGACAGAGCAAATTGTAGCATAA
Protein sequence

>Msa0463490

MENKFQNSTLLELSAIDDIEAFKREVEEKGYDINEAGKIGSKKMCYEKRTPLMIASLFGSIRVVKYIIETNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLVDAGADNFLVPKSKELEVEKKDSGYAIDISLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPGENARRRDPKNCVPCPEFRKGTCQKKDACEYSHGVFESLLHPAQYRTRLCKDEIRCSRKVCFFAHKHEELRPLYASTAMPSQESLPISNVSTPPMSPLVADSSPKNGNYMWKNKINHSPPSLQLKNALSARDLYQEMDLFQLNQNRNHVQANYPFNNTVSSPMRKPSAYGFDSSAAMAAAVKNSRSSAFATRSQSFMDRGVSRRHISASESNSRMNSDWISNDWDELHKLKKSASFGFRNSMVVASPVARPEHVEPDVSWVHSLVQEVSSENSEIFGAERLHYDLYNQKLSPWAEQMPLNMENKFQNSVLLELSAIDDIEAFKREVEEKGYDVNEAGYWYCRKIGSKKMCYEKRTPLMVASLFGSIRVVKYIIIQTNMVNVNMAIGSENVTALHCAVAGGSKSKFEIVKLLLDAGADVDSLDEIIKQKILVPDLKELEAEKKDSGYAIDISLPDINNGVFVTDEFRMYSFKVKTCSRGYTHDWTECPFVHPGENARRRDPKKYPYSCVPCPEFRKGTCQKKDACEYSHGVFESLLHPAQYRTRLCKDEIRCTRKVCFFAHKHEELRPLYASTGSAMPSQESLPISNVSTPPMSPLVADSSPKNGNYMWKNKINLTPPSLQLKNSLSARDLYQEMDLLHGISMQPSTPNQFQSMSRFQQNQNRNHVQASYPFNSIVSSPMRKSSAYGFDSSAAMAAAVMNSRSSAFVTRSQSFMDRGVSRHHIGASESNSRMNSGLSDWVSNDWDELHKLEKSASFGFRNNMAAASPVARPQHAEPDVSWVHSLVQEVSSENSEIFGAERLHYDLYKQKLSPWTEQIVA*