Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421930 | XP_003601802.1 | 96.767 | 464 | 12 | 1 | 1 | 464 | 1 | 461 | 0.0 | 922 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421930 | sp|Q4V399|RSGA1_ARATH | 69.606 | 431 | 120 | 5 | 47 | 470 | 1 | 427 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421930 | G7JC10 | 96.767 | 464 | 12 | 1 | 1 | 464 | 1 | 461 | 0.0 | 922 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0421930 | 0.807201 | 5.674239e-50 | -8.615850e-47 |
| Msa0011920 | Msa0421930 | 0.834103 | 3.636814e-56 | -8.615850e-47 |
| Msa0373370 | Msa0421930 | 0.954302 | 4.016897e-112 | -8.615850e-47 |
| Msa0421930 | Msa0514340 | 0.998173 | 6.337109e-258 | -8.615850e-47 |
| Msa0421930 | Msa0617470 | 0.825386 | 4.821276e-54 | -8.615850e-47 |
| Msa0421930 | Msa0700250 | 0.826027 | 3.397171e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421930 | MtrunA17_Chr3g0122661 | 96.767 | 464 | 12 | 1 | 1 | 464 | 1 | 461 | 0.0 | 922 |
| Msa0421930 | MtrunA17_Chr3g0122691 | 90.909 | 66 | 6 | 0 | 286 | 351 | 32 | 97 | 5.35e-35 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0421930 | AT1G67440.2 | 65.164 | 488 | 148 | 9 | 1 | 470 | 1 | 484 | 0.0 | 612 |
| Msa0421930 | AT1G67440.1 | 69.606 | 431 | 120 | 5 | 47 | 470 | 1 | 427 | 0.0 | 600 |
| Msa0421930 | AT1G67460.2 | 58.943 | 246 | 89 | 3 | 28 | 270 | 35 | 271 | 2.07e-91 | 280 |
| Msa0421930 | AT1G67460.1 | 58.943 | 246 | 89 | 3 | 28 | 270 | 35 | 271 | 2.07e-91 | 280 |
Find 163 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTTCGGCTTGTATCTC+TGG | 0.155494 | 3_2:-70969001 | Msa0421930:three_prime_UTR |
| CATTCCTCAAAGCATTTAAA+AGG | 0.170873 | 3_2:+70969072 | None:intergenic |
| GTCTCTCTGCTTCCATTATC+TGG | 0.207671 | 3_2:-70969993 | Msa0421930:CDS |
| TTGCTTGGAGCTTCGTGTTT+AGG | 0.223906 | 3_2:+70971929 | None:intergenic |
| AAGTACGAGGATTGCTTCTA+AGG | 0.236404 | 3_2:+70970224 | None:intergenic |
| GACGATTACGCGCATGAAAT+TGG | 0.238913 | 3_2:+70971784 | None:intergenic |
| TGCTTGGAGCTTCGTGTTTA+GGG | 0.240644 | 3_2:+70971930 | None:intergenic |
| GAGCTTCGTGTTTAGGGTTT+TGG | 0.260240 | 3_2:+70971936 | None:intergenic |
| TCAAATAATATAGTTGGATT+TGG | 0.270741 | 3_2:+70968771 | None:intergenic |
| AATATTTACAATCAGTATAA+TGG | 0.281341 | 3_2:+70969023 | None:intergenic |
| TTCTAGTAGGTTCTGTTGAT+TGG | 0.284638 | 3_2:-70971643 | Msa0421930:CDS |
| GAAGGCTAGGTTTCGTGGTT+GGG | 0.290326 | 3_2:-70970374 | Msa0421930:CDS |
| TTGCCAAGTTAAACGACATT+TGG | 0.294470 | 3_2:+70972219 | None:intergenic |
| GAAGATTCGGATTGAACTAA+TGG | 0.321003 | 3_2:+70968944 | None:intergenic |
| TTGGTTGAAGCTGAGTCTAC+TGG | 0.324422 | 3_2:-70971479 | Msa0421930:CDS |
| ACCACGAAACCTAGCCTTCC+AGG | 0.329881 | 3_2:+70970378 | None:intergenic |
| GGGAACTCACTTGACCCTAA+TGG | 0.330772 | 3_2:+70968965 | None:intergenic |
| ATATTTACAATCAGTATAAT+GGG | 0.337996 | 3_2:+70969024 | None:intergenic |
| CTGTTGTTTGATCTCTCAAT+TGG | 0.349084 | 3_2:+70970293 | None:intergenic |
| CAGGTTAAAGACAGGAGATA+TGG | 0.352026 | 3_2:-70969223 | Msa0421930:CDS |
| GGGTCAAGTGAGTTCCCATT+AGG | 0.352346 | 3_2:-70968980 | Msa0421930:three_prime_UTR |
| GAAGATAAAGCGTAGGGTTA+TGG | 0.354514 | 3_2:-70971678 | Msa0421930:CDS |
| CATTAACAAACACACCGTTC+TGG | 0.354718 | 3_2:-70968880 | Msa0421930:three_prime_UTR |
| CGGTGGCCACCGTGCGGTGG+TGG | 0.354820 | 3_2:+70972011 | None:intergenic |
| GAGTTCCAATTGAGGACATT+TGG | 0.366085 | 3_2:-70969644 | Msa0421930:CDS |
| GGAACTCACTTGACCCTAAT+GGG | 0.366995 | 3_2:+70968966 | None:intergenic |
| TTGTATAGACCATGGATTCC+TGG | 0.371995 | 3_2:-70970396 | Msa0421930:intron |
| CGGCGGTGGCCACCGTGCGG+TGG | 0.373264 | 3_2:+70972008 | None:intergenic |
| TCTAGTAGGTTCTGTTGATT+GGG | 0.376109 | 3_2:-70971642 | Msa0421930:CDS |
| ATCGTCCAACCACAACCTTC+CGG | 0.379236 | 3_2:-70971767 | Msa0421930:CDS |
| TTTGGTTTCTGGCGGAGATT+TGG | 0.382003 | 3_2:+70971954 | None:intergenic |
| ATTTCTTCGCGGGAGAGAAT+TGG | 0.383994 | 3_2:+70971857 | None:intergenic |
| TGCTTGCATCTTGGTGAACC+TGG | 0.385315 | 3_2:-70969740 | Msa0421930:CDS |
| TGCCAAGTTAAACGACATTT+GGG | 0.388462 | 3_2:+70972220 | None:intergenic |
| CTCCAAGTAGATTGAAATCA+AGG | 0.391880 | 3_2:-70972249 | Msa0421930:five_prime_UTR |
| GGAAGGCTAGGTTTCGTGGT+TGG | 0.394699 | 3_2:-70970375 | Msa0421930:CDS |
| AACCTTGATTTCAATCTACT+TGG | 0.395904 | 3_2:+70972247 | None:intergenic |
| TCCTTTCGGCTTGTATCTCT+GGG | 0.396799 | 3_2:-70969000 | Msa0421930:three_prime_UTR |
| GACGCCGACGGCTTGGGATT+CGG | 0.396813 | 3_2:+70971823 | None:intergenic |
| CAAGATCATCTAAAATTGAT+TGG | 0.398920 | 3_2:+70969133 | None:intergenic |
| GAGAAGTCGAGGGGCGGCGG+TGG | 0.404217 | 3_2:+70971994 | None:intergenic |
| CTGTTGATTGGGTTGATCGT+AGG | 0.406397 | 3_2:-70971631 | Msa0421930:CDS |
| TACCCAAATGTCGTTTAACT+TGG | 0.408337 | 3_2:-70972222 | Msa0421930:five_prime_UTR |
| AGAAGCGTCGTGGAAGGTTC+CGG | 0.409571 | 3_2:+70971748 | None:intergenic |
| AAGCGACGACGCCGACGGCT+TGG | 0.411672 | 3_2:+70971816 | None:intergenic |
| TAGTTCCAAATGTCCTCAAT+TGG | 0.413031 | 3_2:+70969639 | None:intergenic |
| TTTAACAATTGCTTGCATCT+TGG | 0.420825 | 3_2:-70969749 | Msa0421930:CDS |
| TGATTGTAAATATTTCCTTT+CGG | 0.421482 | 3_2:-70969014 | Msa0421930:three_prime_UTR |
| ATTCCTCAAAGCATTTAAAA+GGG | 0.424975 | 3_2:+70969073 | None:intergenic |
| GGCTTGGGATTCGGAGAGAG+GGG | 0.435674 | 3_2:+70971832 | None:intergenic |
| TAGGGTTATGGTTGGAGATA+AGG | 0.435965 | 3_2:-70971666 | Msa0421930:CDS |
| GGTTATCTTGCTGATACTCC+TGG | 0.436211 | 3_2:-70969966 | Msa0421930:CDS |
| TTCCACGACGCTTCTTCCTC+CGG | 0.440838 | 3_2:-70971740 | Msa0421930:CDS |
| GCTTGGGATTCGGAGAGAGG+GGG | 0.444173 | 3_2:+70971833 | None:intergenic |
| AGCGACGACGCCGACGGCTT+GGG | 0.447495 | 3_2:+70971817 | None:intergenic |
| GGTCAAGTGAGTTCCCATTA+GGG | 0.448628 | 3_2:-70968979 | Msa0421930:three_prime_UTR |
| AACCAAAGTGACAGAAGATT+CGG | 0.452756 | 3_2:+70968931 | None:intergenic |
| TCCTGGAAGGCTAGGTTTCG+TGG | 0.453297 | 3_2:-70970379 | Msa0421930:CDS |
| GTGGAGAAGTCGAGGGGCGG+CGG | 0.454962 | 3_2:+70971991 | None:intergenic |
| CTTGGGATTCGGAGAGAGGG+GGG | 0.455183 | 3_2:+70971834 | None:intergenic |
| TGTTGATTGGGTTGATCGTA+GGG | 0.457021 | 3_2:-70971630 | Msa0421930:CDS |
| CTCTGCTTCCATTATCTGGA+GGG | 0.457833 | 3_2:-70969989 | Msa0421930:CDS |
| GTTGGAGATAAGGTTCTAGT+AGG | 0.459409 | 3_2:-70971656 | Msa0421930:CDS |
| CGGCTTGGGATTCGGAGAGA+GGG | 0.460587 | 3_2:+70971831 | None:intergenic |
| CTCACGTCAAATAATATAGT+TGG | 0.462045 | 3_2:+70968765 | None:intergenic |
| TACGCGCATGAAATTGGCTT+GGG | 0.466467 | 3_2:+70971790 | None:intergenic |
| AAGGCTAGGTTTCGTGGTTG+GGG | 0.469259 | 3_2:-70970373 | Msa0421930:CDS |
| TGGCCACCGTGCGGTGGTGG+CGG | 0.469834 | 3_2:+70972014 | None:intergenic |
| AGGTTAAAGACAGGAGATAT+GGG | 0.470165 | 3_2:-70969222 | Msa0421930:CDS |
| CGTGCGGTGGTGGCGGATGA+TGG | 0.471121 | 3_2:+70972021 | None:intergenic |
| GCATAGCAGTTCAGCTCCTC+CGG | 0.471803 | 3_2:+70971721 | None:intergenic |
| GTTTCAACAAGAAGCGGCAG+AGG | 0.472643 | 3_2:-70970035 | Msa0421930:CDS |
| ATCCGAATCTTCTGTCACTT+TGG | 0.472909 | 3_2:-70968933 | Msa0421930:three_prime_UTR |
| TGAACCTGGTTGCATTGTGA+AGG | 0.479235 | 3_2:-70969726 | Msa0421930:CDS |
| TGGAAGGTTCCGGAAGGTTG+TGG | 0.482234 | 3_2:+70971758 | None:intergenic |
| AGATTTGGAAGTGGCGGAAG+TGG | 0.482820 | 3_2:+70971969 | None:intergenic |
| TCACTTTCAATAAACTAGGC+TGG | 0.486647 | 3_2:+70969937 | None:intergenic |
| GCTTTGAGGAGATTCTTGCT+TGG | 0.489229 | 3_2:+70971914 | None:intergenic |
| GACCGAGCTTGTCGATAAAG+AGG | 0.489417 | 3_2:-70971429 | Msa0421930:intron |
| GTTGTTGGTCCTAGTGGAGT+TGG | 0.490221 | 3_2:-70970268 | Msa0421930:CDS |
| AAGATTCGGATTGAACTAAT+GGG | 0.491015 | 3_2:+70968945 | None:intergenic |
| ATACTGCAGATGGGGAGAAT+TGG | 0.493768 | 3_2:-70970198 | Msa0421930:CDS |
| TTGTTGGTCCTAGTGGAGTT+GGG | 0.495356 | 3_2:-70970267 | Msa0421930:CDS |
| CTGCTTCCATTATCTGGAGG+GGG | 0.497196 | 3_2:-70969987 | Msa0421930:CDS |
| TTTGGAAGTGGCGGAAGTGG+TGG | 0.503442 | 3_2:+70971972 | None:intergenic |
| TGGTTGAAGCTGAGTCTACT+GGG | 0.506340 | 3_2:-70971478 | Msa0421930:CDS |
| ACGGCTTGGGATTCGGAGAG+AGG | 0.506518 | 3_2:+70971830 | None:intergenic |
| CCATGGATTCCTGGAAGGCT+AGG | 0.511868 | 3_2:-70970387 | Msa0421930:CDS |
| CGTACTTGTGATACTGCAGA+TGG | 0.516591 | 3_2:-70970208 | Msa0421930:CDS |
| CGGAAGTGGTGGAGAAGTCG+AGG | 0.517919 | 3_2:+70971983 | None:intergenic |
| CTAAAAGAGAAAGTGATGTA+AGG | 0.519678 | 3_2:-70969619 | Msa0421930:intron |
| CTAGACTTCCCAACTCCACT+AGG | 0.522416 | 3_2:+70970259 | None:intergenic |
| AACTATATTATTTGACGTGA+GGG | 0.525483 | 3_2:-70968763 | None:intergenic |
| TTTGTCACTTTCAATAAACT+AGG | 0.528240 | 3_2:+70969933 | None:intergenic |
| GATCAAACAACAGTGGTTGT+TGG | 0.530900 | 3_2:-70970283 | Msa0421930:CDS |
| AGAGGAATGTGATTCGTGAC+TGG | 0.531609 | 3_2:+70972179 | None:intergenic |
| TCTGCTTCCATTATCTGGAG+GGG | 0.535703 | 3_2:-70969988 | Msa0421930:CDS |
| AAACTAGGCTGGTTAAATCC+AGG | 0.536343 | 3_2:+70969948 | None:intergenic |
| GATTTCAATCTACTTGGAGA+GGG | 0.537267 | 3_2:+70972253 | None:intergenic |
| CCTAGCCTTCCAGGAATCCA+TGG | 0.539729 | 3_2:+70970387 | None:intergenic |
| ATAAAGCGTAGGGTTATGGT+TGG | 0.540235 | 3_2:-70971674 | Msa0421930:CDS |
| TCTCTGCTTCCATTATCTGG+AGG | 0.540330 | 3_2:-70969990 | Msa0421930:CDS |
| GAGAAGATCAATGTTATGTC+CGG | 0.541511 | 3_2:+70970321 | None:intergenic |
| GGAGAGAATTGGAGCGAGAG+AGG | 0.542168 | 3_2:+70971868 | None:intergenic |
| AGCGTAAAAGGCTCAAGCTT+AGG | 0.542808 | 3_2:+70971512 | None:intergenic |
| TTGAAACCTCTGCAACTCGC+TGG | 0.543440 | 3_2:+70970051 | None:intergenic |
| GCTGATTGCATATAAATGAA+TGG | 0.545289 | 3_2:-70968842 | Msa0421930:three_prime_UTR |
| GAGGACTGAGCGAGCGAGAG+AGG | 0.546169 | 3_2:+70972161 | None:intergenic |
| AGAAGCATAGAAGACAGTCT+AGG | 0.546591 | 3_2:-70969167 | Msa0421930:CDS |
| TTACGCGCATGAAATTGGCT+TGG | 0.548758 | 3_2:+70971789 | None:intergenic |
| TTCTGGCGGAGATTTGGAAG+TGG | 0.551031 | 3_2:+70971960 | None:intergenic |
| ACAGTGGTTGTTGGTCCTAG+TGG | 0.554024 | 3_2:-70970274 | Msa0421930:CDS |
| GAACCTGGTTGCATTGTGAA+GGG | 0.563500 | 3_2:-70969725 | Msa0421930:CDS |
| TGCGAGCGACATCTTGAAGA+AGG | 0.563718 | 3_2:+70972051 | None:intergenic |
| GCAGAGGTTTCAACAAGAAG+CGG | 0.565810 | 3_2:-70970041 | Msa0421930:CDS |
| GGAAGTGGTGGAGAAGTCGA+GGG | 0.572092 | 3_2:+70971984 | None:intergenic |
| TTGTTGAGAGCAAGAGTGAG+AGG | 0.573575 | 3_2:+70971452 | None:intergenic |
| TGATTTCAATCTACTTGGAG+AGG | 0.576231 | 3_2:+70972252 | None:intergenic |
| AGGTTCCGGAAGGTTGTGGT+TGG | 0.578813 | 3_2:+70971762 | None:intergenic |
| TCCTCAAAGCATTTAAAAGG+GGG | 0.580228 | 3_2:+70969075 | None:intergenic |
| GGAAGAAGCGACGACGCCGA+CGG | 0.580853 | 3_2:+70971811 | None:intergenic |
| GAGTTCATTTCTCAAGTGTG+AGG | 0.583223 | 3_2:+70972142 | None:intergenic |
| CAGATCAGGAAAATGCTTGG+TGG | 0.584183 | 3_2:-70969794 | Msa0421930:CDS |
| TCAGAGAGGAGTTCCAATTG+AGG | 0.586932 | 3_2:-70969652 | Msa0421930:CDS |
| ATTCAGATCAGGAAAATGCT+TGG | 0.587023 | 3_2:-70969797 | Msa0421930:intron |
| AACCTCTTTATCGACAAGCT+CGG | 0.587353 | 3_2:+70971427 | None:intergenic |
| ACCTGGTTGCATTGTGAAGG+GGG | 0.590236 | 3_2:-70969723 | Msa0421930:CDS |
| CAACTATATTATTTGACGTG+AGG | 0.590322 | 3_2:-70968764 | None:intergenic |
| GGGCGGCGGTGGCCACCGTG+CGG | 0.598094 | 3_2:+70972005 | None:intergenic |
| TTCCTCAAAGCATTTAAAAG+GGG | 0.598316 | 3_2:+70969074 | None:intergenic |
| AACCTGGTTGCATTGTGAAG+GGG | 0.599384 | 3_2:-70969724 | Msa0421930:CDS |
| GGAGGAAGAAGCGTCGTGGA+AGG | 0.600717 | 3_2:+70971742 | None:intergenic |
| AGTACGAGGATTGCTTCTAA+GGG | 0.603135 | 3_2:+70970225 | None:intergenic |
| AAGTGATCTACATTAGCCAC+AGG | 0.604808 | 3_2:+70971560 | None:intergenic |
| GTACTTGTGATACTGCAGAT+GGG | 0.607653 | 3_2:-70970207 | Msa0421930:CDS |
| TGACGACCAGCGAGTTGCAG+AGG | 0.611255 | 3_2:-70970057 | Msa0421930:CDS |
| CACGACGCTTCTTCCTCCGG+AGG | 0.615950 | 3_2:-70971737 | Msa0421930:CDS |
| GTGGTGGAGAAGTCGAGGGG+CGG | 0.619313 | 3_2:+70971988 | None:intergenic |
| TACTTGTGATACTGCAGATG+GGG | 0.623537 | 3_2:-70970206 | Msa0421930:CDS |
| CTCCGGAGGAAGAAGCGTCG+TGG | 0.623732 | 3_2:+70971738 | None:intergenic |
| GCTGAAGAAGATAAAGCGTA+GGG | 0.624542 | 3_2:-70971684 | Msa0421930:CDS |
| TGACGACAATTTGCTTGATG+AGG | 0.624956 | 3_2:-70969106 | Msa0421930:CDS |
| TTTCAACAAGAAGCGGCAGA+GGG | 0.628194 | 3_2:-70970034 | Msa0421930:CDS |
| TGCTGAAGAAGATAAAGCGT+AGG | 0.630697 | 3_2:-70971685 | Msa0421930:CDS |
| GTTGATTGGGTTGATCGTAG+GGG | 0.630927 | 3_2:-70971629 | Msa0421930:CDS |
| ACCCAGAGATACAAGCCGAA+AGG | 0.636929 | 3_2:+70968999 | None:intergenic |
| CTCTCCGAATCCCAAGCCGT+CGG | 0.641704 | 3_2:-70971827 | Msa0421930:CDS |
| ATAGACCATGGATTCCTGGA+AGG | 0.644099 | 3_2:-70970392 | Msa0421930:intron |
| TATTTACAATCAGTATAATG+GGG | 0.644674 | 3_2:+70969025 | None:intergenic |
| GAAGTGGTGGAGAAGTCGAG+GGG | 0.645864 | 3_2:+70971985 | None:intergenic |
| TGGCGGAGATTTGGAAGTGG+CGG | 0.647171 | 3_2:+70971963 | None:intergenic |
| TGAAATGCTTGATCCTCCTG+TGG | 0.652697 | 3_2:-70971576 | Msa0421930:CDS |
| TCATTTATATGCAATCAGCA+AGG | 0.659438 | 3_2:+70968846 | None:intergenic |
| TAGCAGTTCAGCTCCTCCGG+AGG | 0.661076 | 3_2:+70971724 | None:intergenic |
| TGATCTACATTAGCCACAGG+AGG | 0.662023 | 3_2:+70971563 | None:intergenic |
| CATCATCCGCCACCACCGCA+CGG | 0.664641 | 3_2:-70972020 | Msa0421930:CDS |
| TGATGAGATTAGAATCAGAG+AGG | 0.672359 | 3_2:-70969666 | Msa0421930:CDS |
| GCGTCGTGGAAGGTTCCGGA+AGG | 0.677099 | 3_2:+70971752 | None:intergenic |
| AGGAACATCATAATCCAGAA+CGG | 0.692664 | 3_2:+70968866 | None:intergenic |
| ATTGAGAGATCAAACAACAG+TGG | 0.706257 | 3_2:-70970290 | Msa0421930:CDS |
| TGCTTCTTAAGCATCAAACG+TGG | 0.724089 | 3_2:+70969183 | None:intergenic |
| CATCCGCCACCACCGCACGG+TGG | 0.767577 | 3_2:-70972017 | Msa0421930:CDS |
| TCTGCAGTATCACAAGTACG+AGG | 0.774848 | 3_2:+70970211 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTTAAATATTTGG+AGG | - | chr3_2:70970430-70970449 | Msa0421930:intron | 10.0% |
| !!! | TATGACAATATTTTTTATGT+TGG | - | chr3_2:70969867-70969886 | Msa0421930:intron | 15.0% |
| !!! | ATTTACTTACAAAACTATTT+TGG | + | chr3_2:70970236-70970255 | None:intergenic | 15.0% |
| !! | CAACAAATTCATAAATTTAA+AGG | + | chr3_2:70970484-70970503 | None:intergenic | 15.0% |
| !! | AATTAAACAATTATTCAAAC+CGG | + | chr3_2:70971202-70971221 | None:intergenic | 15.0% |
| !! | ATATTTACAATCAGTATAAT+GGG | + | chr3_2:70972009-70972028 | None:intergenic | 15.0% |
| !! | AATATTTACAATCAGTATAA+TGG | + | chr3_2:70972010-70972029 | None:intergenic | 15.0% |
| !!! | TTTCAAAGCTTTTTTTGAAA+CGG | + | chr3_2:70968947-70968966 | None:intergenic | 20.0% |
| !!! | TGGAATATAAAAGAGTATTT+TGG | - | chr3_2:70969887-70969906 | Msa0421930:intron | 20.0% |
| !! | AGTAATAACATAAACAATTG+CGG | + | chr3_2:70970091-70970110 | None:intergenic | 20.0% |
| !!! | ATAAGCTATTTTTATACCAA+AGG | - | chr3_2:70970119-70970138 | Msa0421930:intron | 20.0% |
| !! | TTTCTTTATATAAGCTATCT+TGG | - | chr3_2:70970160-70970179 | Msa0421930:intron | 20.0% |
| !!! | TATTTGTTATGTTTCTAACT+TGG | - | chr3_2:70970565-70970584 | Msa0421930:intron | 20.0% |
| !! | TAACTTAAACATACTAACTT+CGG | + | chr3_2:70971146-70971165 | None:intergenic | 20.0% |
| !! | TATTTACAATCAGTATAATG+GGG | + | chr3_2:70972008-70972027 | None:intergenic | 20.0% |
| !! | TGATTGTAAATATTTCCTTT+CGG | - | chr3_2:70972016-70972035 | Msa0421930:CDS | 20.0% |
| !! | TCAAATAATATAGTTGGATT+TGG | + | chr3_2:70972262-70972281 | None:intergenic | 20.0% |
| ! | AAAAAAATCACATCCAACAT+TGG | + | chr3_2:70969741-70969760 | None:intergenic | 25.0% |
| ! | ATTGAAACGATTATCCAAAT+CGG | + | chr3_2:70969783-70969802 | None:intergenic | 25.0% |
| !!! | AGTTTTGTAAGTAAATATGC+TGG | - | chr3_2:70970240-70970259 | Msa0421930:CDS | 25.0% |
| ! | GTACTTATCTCAATTGAAAA+AGG | + | chr3_2:70970299-70970318 | None:intergenic | 25.0% |
| ! | TTTCAATTGAGATAAGTACT+TGG | - | chr3_2:70970300-70970319 | Msa0421930:CDS | 25.0% |
| ! | GAGCTTCTTAAATAATTTGA+CGG | - | chr3_2:70970380-70970399 | Msa0421930:CDS | 25.0% |
| ! | AGCTTCTTAAATAATTTGAC+GGG | - | chr3_2:70970381-70970400 | Msa0421930:CDS | 25.0% |
| !!! | TAAATATTTGGAGGTATCAT+TGG | - | chr3_2:70970439-70970458 | Msa0421930:intron | 25.0% |
| !!! | AAATATTTGGAGGTATCATT+GGG | - | chr3_2:70970440-70970459 | Msa0421930:intron | 25.0% |
| !! | TTGAAAAGTTTGTTCAAGTT+CGG | - | chr3_2:70970501-70970520 | Msa0421930:intron | 25.0% |
| !! | TTTTACTATGTGTATGACTT+TGG | - | chr3_2:70970894-70970913 | Msa0421930:intron | 25.0% |
| !!! | TTTGTCACTTTCAATAAACT+AGG | + | chr3_2:70971100-70971119 | None:intergenic | 25.0% |
| ! | AACTTAAACATACTAACTTC+GGG | + | chr3_2:70971145-70971164 | None:intergenic | 25.0% |
| ! | GTGAATATACTAGATATAGT+TGG | + | chr3_2:70971172-70971191 | None:intergenic | 25.0% |
| !! | TAGTATATTCACAGTTTTTC+CGG | - | chr3_2:70971180-70971199 | Msa0421930:intron | 25.0% |
| ! | AATGCAAAAGATTTCTAACT+TGG | - | chr3_2:70971680-70971699 | Msa0421930:CDS | 25.0% |
| ! | CAAAAGTTGTAACAAGTATT+TGG | - | chr3_2:70971763-70971782 | Msa0421930:CDS | 25.0% |
| !! | CAAGATCATCTAAAATTGAT+TGG | + | chr3_2:70971900-70971919 | None:intergenic | 25.0% |
| !! | ATTCCTCAAAGCATTTAAAA+GGG | + | chr3_2:70971960-70971979 | None:intergenic | 25.0% |
| AACCTTGATTTCAATCTACT+TGG | + | chr3_2:70968786-70968805 | None:intergenic | 30.0% | |
| TCATAATCAGAATGTCGTTA+TGG | + | chr3_2:70969640-70969659 | None:intergenic | 30.0% | |
| ! | CACAATTTTCATCTAACACA+AGG | + | chr3_2:70969703-70969722 | None:intergenic | 30.0% |
| CTTGTGTTAGATGAAAATTG+TGG | - | chr3_2:70969701-70969720 | Msa0421930:CDS | 30.0% | |
| ! | TTTTCAGCCAATAAGAGTTA+AGG | - | chr3_2:70969757-70969776 | Msa0421930:CDS | 30.0% |
| ! | ACCAGTTTCTAGATCAAAAA+GGG | - | chr3_2:70970018-70970037 | Msa0421930:CDS | 30.0% |
| TCAAATAAGTGAATCCAAAG+AGG | - | chr3_2:70970272-70970291 | Msa0421930:CDS | 30.0% | |
| GATTCAACACTGCAAAAAAT+TGG | + | chr3_2:70970690-70970709 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGCAGTGTTGAATC+CGG | - | chr3_2:70970690-70970709 | Msa0421930:intron | 30.0% |
| TAAAATCTGAGAAACAATGC+AGG | + | chr3_2:70970939-70970958 | None:intergenic | 30.0% | |
| !! | TGCATTGTTTCTCAGATTTT+AGG | - | chr3_2:70970938-70970957 | Msa0421930:intron | 30.0% |
| TTTAACAATTGCTTGCATCT+TGG | - | chr3_2:70971281-70971300 | Msa0421930:intron | 30.0% | |
| CTAAAAGAGAAAGTGATGTA+AGG | - | chr3_2:70971411-70971430 | Msa0421930:intron | 30.0% | |
| TGTATGATACTTGATCGAAT+AGG | - | chr3_2:70971486-70971505 | Msa0421930:CDS | 30.0% | |
| TTTGACAAGCAATATACAGT+AGG | + | chr3_2:70971738-70971757 | None:intergenic | 30.0% | |
| ! | ACTAATACGCTATTCTTTTC+AGG | - | chr3_2:70971788-70971807 | Msa0421930:CDS | 30.0% |
| !!! | ATTCTTTTCAGGTTAAAGAC+AGG | - | chr3_2:70971799-70971818 | Msa0421930:CDS | 30.0% |
| ! | TTCCTCAAAGCATTTAAAAG+GGG | + | chr3_2:70971959-70971978 | None:intergenic | 30.0% |
| ! | CATTCCTCAAAGCATTTAAA+AGG | + | chr3_2:70971961-70971980 | None:intergenic | 30.0% |
| GGGGATTAACGAAAAATTTA+AGG | + | chr3_2:70971989-70972008 | None:intergenic | 30.0% | |
| AAGATTCGGATTGAACTAAT+GGG | + | chr3_2:70972088-70972107 | None:intergenic | 30.0% | |
| TCATTTATATGCAATCAGCA+AGG | + | chr3_2:70972187-70972206 | None:intergenic | 30.0% | |
| GCTGATTGCATATAAATGAA+TGG | - | chr3_2:70972188-70972207 | Msa0421930:five_prime_UTR | 30.0% | |
| CTCACGTCAAATAATATAGT+TGG | + | chr3_2:70972268-70972287 | None:intergenic | 30.0% | |
| GATTTCAATCTACTTGGAGA+GGG | + | chr3_2:70968780-70968799 | None:intergenic | 35.0% | |
| TGATTTCAATCTACTTGGAG+AGG | + | chr3_2:70968781-70968800 | None:intergenic | 35.0% | |
| CTCCAAGTAGATTGAAATCA+AGG | - | chr3_2:70968781-70968800 | Msa0421930:three_prime_UTR | 35.0% | |
| ! | TACCCAAATGTCGTTTAACT+TGG | - | chr3_2:70968808-70968827 | Msa0421930:three_prime_UTR | 35.0% |
| TGCCAAGTTAAACGACATTT+GGG | + | chr3_2:70968813-70968832 | None:intergenic | 35.0% | |
| TTGCCAAGTTAAACGACATT+TGG | + | chr3_2:70968814-70968833 | None:intergenic | 35.0% | |
| TTCTAGTAGGTTCTGTTGAT+TGG | - | chr3_2:70969387-70969406 | Msa0421930:intron | 35.0% | |
| ! | TCTAGTAGGTTCTGTTGATT+GGG | - | chr3_2:70969388-70969407 | Msa0421930:intron | 35.0% |
| AGCTTAGATTAGACCAATGT+TGG | - | chr3_2:70969725-70969744 | Msa0421930:CDS | 35.0% | |
| AAATCGGCCTTAACTCTTAT+TGG | + | chr3_2:70969767-70969786 | None:intergenic | 35.0% | |
| AATAAGAGTTAAGGCCGATT+TGG | - | chr3_2:70969766-70969785 | Msa0421930:CDS | 35.0% | |
| CAAAACAGGTAACAAATGAC+TGG | + | chr3_2:70969986-70970005 | None:intergenic | 35.0% | |
| ! | GACCAGTTTCTAGATCAAAA+AGG | - | chr3_2:70970017-70970036 | Msa0421930:CDS | 35.0% |
| ! | CCAGTTTCTAGATCAAAAAG+GGG | - | chr3_2:70970019-70970038 | Msa0421930:CDS | 35.0% |
| TTTGATCTGCTAGAAAACAG+GGG | + | chr3_2:70970064-70970083 | None:intergenic | 35.0% | |
| GTTTGATCTGCTAGAAAACA+GGG | + | chr3_2:70970065-70970084 | None:intergenic | 35.0% | |
| !!! | GTCTGACTTGTTTTATCCTT+TGG | + | chr3_2:70970138-70970157 | None:intergenic | 35.0% |
| CAATTGAAAAAGGACCTCTT+TGG | + | chr3_2:70970289-70970308 | None:intergenic | 35.0% | |
| ! | ACTTGGCTCTTAATACAAAC+AGG | - | chr3_2:70970317-70970336 | Msa0421930:CDS | 35.0% |
| !! | GGCAGAAACTGATTCATTTT+AGG | - | chr3_2:70970402-70970421 | Msa0421930:intron | 35.0% |
| CATCAGAAAATAATCACAGC+TGG | + | chr3_2:70970594-70970613 | None:intergenic | 35.0% | |
| TTTCACTCTTGTATAGACCA+TGG | - | chr3_2:70970626-70970645 | Msa0421930:intron | 35.0% | |
| GAGAAGATCAATGTTATGTC+CGG | + | chr3_2:70970712-70970731 | None:intergenic | 35.0% | |
| ! | CTGTTGTTTGATCTCTCAAT+TGG | + | chr3_2:70970740-70970759 | None:intergenic | 35.0% |
| ATTGAGAGATCAAACAACAG+TGG | - | chr3_2:70970740-70970759 | Msa0421930:intron | 35.0% | |
| TCACTTTCAATAAACTAGGC+TGG | + | chr3_2:70971096-70971115 | None:intergenic | 35.0% | |
| ! | CATTTTCCTGATCTGAATAG+GGG | + | chr3_2:70971231-70971250 | None:intergenic | 35.0% |
| ! | GCATTTTCCTGATCTGAATA+GGG | + | chr3_2:70971232-70971251 | None:intergenic | 35.0% |
| ! | AGCATTTTCCTGATCTGAAT+AGG | + | chr3_2:70971233-70971252 | None:intergenic | 35.0% |
| ATTCAGATCAGGAAAATGCT+TGG | - | chr3_2:70971233-70971252 | Msa0421930:intron | 35.0% | |
| TGATGAGATTAGAATCAGAG+AGG | - | chr3_2:70971364-70971383 | Msa0421930:intron | 35.0% | |
| TAGTTCCAAATGTCCTCAAT+TGG | + | chr3_2:70971394-70971413 | None:intergenic | 35.0% | |
| !!! | TGATTTTTTGACCATGTACG+AGG | - | chr3_2:70971528-70971547 | Msa0421930:CDS | 35.0% |
| ACACTAACATGAAAGAGAGT+GGG | - | chr3_2:70971592-70971611 | Msa0421930:CDS | 35.0% | |
| !!! | AAAGAGAGTGGGCTATTTTT+AGG | - | chr3_2:70971603-70971622 | Msa0421930:CDS | 35.0% |
| !!! | AAGAGAGTGGGCTATTTTTA+GGG | - | chr3_2:70971604-70971623 | Msa0421930:CDS | 35.0% |
| AGGTTAAAGACAGGAGATAT+GGG | - | chr3_2:70971808-70971827 | Msa0421930:CDS | 35.0% | |
| ! | TCCTCAAAGCATTTAAAAGG+GGG | + | chr3_2:70971958-70971977 | None:intergenic | 35.0% |
| GAAGATTCGGATTGAACTAA+TGG | + | chr3_2:70972089-70972108 | None:intergenic | 35.0% | |
| AACCAAAGTGACAGAAGATT+CGG | + | chr3_2:70972102-70972121 | None:intergenic | 35.0% | |
| AGGAACATCATAATCCAGAA+CGG | + | chr3_2:70972167-70972186 | None:intergenic | 35.0% | |
| GAGTTCATTTCTCAAGTGTG+AGG | + | chr3_2:70968891-70968910 | None:intergenic | 40.0% | |
| !!! | TTTAGGGTTTTGGTTTCTGG+CGG | + | chr3_2:70969087-70969106 | None:intergenic | 40.0% |
| !!! | GTGTTTAGGGTTTTGGTTTC+TGG | + | chr3_2:70969090-70969109 | None:intergenic | 40.0% |
| TGCTGAAGAAGATAAAGCGT+AGG | - | chr3_2:70969345-70969364 | Msa0421930:intron | 40.0% | |
| GCTGAAGAAGATAAAGCGTA+GGG | - | chr3_2:70969346-70969365 | Msa0421930:intron | 40.0% | |
| GAAGATAAAGCGTAGGGTTA+TGG | - | chr3_2:70969352-70969371 | Msa0421930:intron | 40.0% | |
| ATAAAGCGTAGGGTTATGGT+TGG | - | chr3_2:70969356-70969375 | Msa0421930:intron | 40.0% | |
| TAGGGTTATGGTTGGAGATA+AGG | - | chr3_2:70969364-70969383 | Msa0421930:intron | 40.0% | |
| ! | GTTGGAGATAAGGTTCTAGT+AGG | - | chr3_2:70969374-70969393 | Msa0421930:intron | 40.0% |
| !! | TGTTGATTGGGTTGATCGTA+GGG | - | chr3_2:70969400-70969419 | Msa0421930:intron | 40.0% |
| AAGTGATCTACATTAGCCAC+AGG | + | chr3_2:70969473-70969492 | None:intergenic | 40.0% | |
| AAAAACCGCGTTAGCGTAAA+AGG | + | chr3_2:70969533-70969552 | None:intergenic | 40.0% | |
| ! | TTTTACGCTAACGCGGTTTT+TGG | - | chr3_2:70969532-70969551 | Msa0421930:intron | 40.0% |
| AACCTCTTTATCGACAAGCT+CGG | + | chr3_2:70969606-70969625 | None:intergenic | 40.0% | |
| CTAGACAAAAAGTTGTCCCA+TGG | - | chr3_2:70969930-70969949 | Msa0421930:CDS | 40.0% | |
| TTGATCTAGAAACTGGTCGT+AGG | + | chr3_2:70970015-70970034 | None:intergenic | 40.0% | |
| ! | CCCCTTTTTGATCTAGAAAC+TGG | + | chr3_2:70970022-70970041 | None:intergenic | 40.0% |
| CGTTTGATCTGCTAGAAAAC+AGG | + | chr3_2:70970066-70970085 | None:intergenic | 40.0% | |
| ! | AACAGGCTTTTATGCGTTGA+AGG | - | chr3_2:70970334-70970353 | Msa0421930:CDS | 40.0% |
| TTGTATAGACCATGGATTCC+TGG | - | chr3_2:70970634-70970653 | Msa0421930:intron | 40.0% | |
| CAACACTGCAAAAAATTGGC+TGG | + | chr3_2:70970686-70970705 | None:intergenic | 40.0% | |
| GATCAAACAACAGTGGTTGT+TGG | - | chr3_2:70970747-70970766 | Msa0421930:intron | 40.0% | |
| AGTACGAGGATTGCTTCTAA+GGG | + | chr3_2:70970808-70970827 | None:intergenic | 40.0% | |
| AAGTACGAGGATTGCTTCTA+AGG | + | chr3_2:70970809-70970828 | None:intergenic | 40.0% | |
| GTACTTGTGATACTGCAGAT+GGG | - | chr3_2:70970823-70970842 | Msa0421930:intron | 40.0% | |
| TACTTGTGATACTGCAGATG+GGG | - | chr3_2:70970824-70970843 | Msa0421930:intron | 40.0% | |
| GTCGAGAAAAAGAAACACAC+AGG | + | chr3_2:70970864-70970883 | None:intergenic | 40.0% | |
| !! | CTCAGATTTTAGGTAGCAAG+TGG | - | chr3_2:70970948-70970967 | Msa0421930:intron | 40.0% |
| ! | AAACTAGGCTGGTTAAATCC+AGG | + | chr3_2:70971085-70971104 | None:intergenic | 40.0% |
| GAGTTCCAATTGAGGACATT+TGG | - | chr3_2:70971386-70971405 | Msa0421930:intron | 40.0% | |
| ATGTATAGCATCCTCGTACA+TGG | + | chr3_2:70971542-70971561 | None:intergenic | 40.0% | |
| GACACTAACATGAAAGAGAG+TGG | - | chr3_2:70971591-70971610 | Msa0421930:CDS | 40.0% | |
| CAGGTTAAAGACAGGAGATA+TGG | - | chr3_2:70971807-70971826 | Msa0421930:CDS | 40.0% | |
| TGCTTCTTAAGCATCAAACG+TGG | + | chr3_2:70971850-70971869 | None:intergenic | 40.0% | |
| ! | AGAAGCATAGAAGACAGTCT+AGG | - | chr3_2:70971863-70971882 | Msa0421930:CDS | 40.0% |
| ! | TGACGACAATTTGCTTGATG+AGG | - | chr3_2:70971924-70971943 | Msa0421930:CDS | 40.0% |
| ! | TCCCCCTTTTAAATGCTTTG+AGG | - | chr3_2:70971954-70971973 | Msa0421930:CDS | 40.0% |
| ! | ATCCGAATCTTCTGTCACTT+TGG | - | chr3_2:70972097-70972116 | Msa0421930:five_prime_UTR | 40.0% |
| CATTAACAAACACACCGTTC+TGG | - | chr3_2:70972150-70972169 | Msa0421930:five_prime_UTR | 40.0% | |
| AGAGGAATGTGATTCGTGAC+TGG | + | chr3_2:70968854-70968873 | None:intergenic | 45.0% | |
| !! | TTTGGTTTCTGGCGGAGATT+TGG | + | chr3_2:70969079-70969098 | None:intergenic | 45.0% |
| !! | GAGCTTCGTGTTTAGGGTTT+TGG | + | chr3_2:70969097-70969116 | None:intergenic | 45.0% |
| TGCTTGGAGCTTCGTGTTTA+GGG | + | chr3_2:70969103-70969122 | None:intergenic | 45.0% | |
| TTGCTTGGAGCTTCGTGTTT+AGG | + | chr3_2:70969104-70969123 | None:intergenic | 45.0% | |
| !! | GCTTTGAGGAGATTCTTGCT+TGG | + | chr3_2:70969119-70969138 | None:intergenic | 45.0% |
| ! | TGAGTGTGCGTTTTGCTTTG+AGG | + | chr3_2:70969133-70969152 | None:intergenic | 45.0% |
| ATTTCTTCGCGGGAGAGAAT+TGG | + | chr3_2:70969176-70969195 | None:intergenic | 45.0% | |
| ! | TACGCGCATGAAATTGGCTT+GGG | + | chr3_2:70969243-70969262 | None:intergenic | 45.0% |
| TTACGCGCATGAAATTGGCT+TGG | + | chr3_2:70969244-70969263 | None:intergenic | 45.0% | |
| GACGATTACGCGCATGAAAT+TGG | + | chr3_2:70969249-70969268 | None:intergenic | 45.0% | |
| !! | CTGTTGATTGGGTTGATCGT+AGG | - | chr3_2:70969399-70969418 | Msa0421930:intron | 45.0% |
| !! | GTTGATTGGGTTGATCGTAG+GGG | - | chr3_2:70969401-70969420 | Msa0421930:intron | 45.0% |
| TGAAATGCTTGATCCTCCTG+TGG | - | chr3_2:70969454-70969473 | Msa0421930:intron | 45.0% | |
| TGATCTACATTAGCCACAGG+AGG | + | chr3_2:70969470-70969489 | None:intergenic | 45.0% | |
| AGCGTAAAAGGCTCAAGCTT+AGG | + | chr3_2:70969521-70969540 | None:intergenic | 45.0% | |
| ! | TTGAGCCTTTTACGCTAACG+CGG | - | chr3_2:70969525-70969544 | Msa0421930:intron | 45.0% |
| TTGGTTGAAGCTGAGTCTAC+TGG | - | chr3_2:70969551-70969570 | Msa0421930:intron | 45.0% | |
| TGGTTGAAGCTGAGTCTACT+GGG | - | chr3_2:70969552-70969571 | Msa0421930:intron | 45.0% | |
| TTGTTGAGAGCAAGAGTGAG+AGG | + | chr3_2:70969581-70969600 | None:intergenic | 45.0% | |
| AAGTTGTCCCATGGTTAGTG+AGG | - | chr3_2:70969939-70969958 | Msa0421930:CDS | 45.0% | |
| AGTTGTCCCATGGTTAGTGA+GGG | - | chr3_2:70969940-70969959 | Msa0421930:CDS | 45.0% | |
| TCTTGTCCCTCACTAACCAT+GGG | + | chr3_2:70969949-70969968 | None:intergenic | 45.0% | |
| TTCTTGTCCCTCACTAACCA+TGG | + | chr3_2:70969950-70969969 | None:intergenic | 45.0% | |
| TCTGCTAGAAAACAGGGGAT+TGG | + | chr3_2:70970059-70970078 | None:intergenic | 45.0% | |
| ATAGACCATGGATTCCTGGA+AGG | - | chr3_2:70970638-70970657 | Msa0421930:intron | 45.0% | |
| TTGTTGGTCCTAGTGGAGTT+GGG | - | chr3_2:70970763-70970782 | Msa0421930:intron | 45.0% | |
| TCTGCAGTATCACAAGTACG+AGG | + | chr3_2:70970822-70970841 | None:intergenic | 45.0% | |
| CGTACTTGTGATACTGCAGA+TGG | - | chr3_2:70970822-70970841 | Msa0421930:intron | 45.0% | |
| ATACTGCAGATGGGGAGAAT+TGG | - | chr3_2:70970832-70970851 | Msa0421930:intron | 45.0% | |
| GAGAAACAATGCAGGTACAC+AGG | + | chr3_2:70970931-70970950 | None:intergenic | 45.0% | |
| GCAGAGGTTTCAACAAGAAG+CGG | - | chr3_2:70970989-70971008 | Msa0421930:intron | 45.0% | |
| TTTCAACAAGAAGCGGCAGA+GGG | - | chr3_2:70970996-70971015 | Msa0421930:intron | 45.0% | |
| GTCTCTCTGCTTCCATTATC+TGG | - | chr3_2:70971037-70971056 | Msa0421930:intron | 45.0% | |
| TCTCTGCTTCCATTATCTGG+AGG | - | chr3_2:70971040-70971059 | Msa0421930:intron | 45.0% | |
| CTCTGCTTCCATTATCTGGA+GGG | - | chr3_2:70971041-70971060 | Msa0421930:intron | 45.0% | |
| TCTGCTTCCATTATCTGGAG+GGG | - | chr3_2:70971042-70971061 | Msa0421930:intron | 45.0% | |
| AGATAACCCCCTCCAGATAA+TGG | + | chr3_2:70971052-70971071 | None:intergenic | 45.0% | |
| GGTTATCTTGCTGATACTCC+TGG | - | chr3_2:70971064-70971083 | Msa0421930:intron | 45.0% | |
| CTGTTTCCCCTATTCAGATC+AGG | - | chr3_2:70971222-70971241 | Msa0421930:intron | 45.0% | |
| CAGATCAGGAAAATGCTTGG+TGG | - | chr3_2:70971236-70971255 | Msa0421930:intron | 45.0% | |
| TGAACCTGGTTGCATTGTGA+AGG | - | chr3_2:70971304-70971323 | Msa0421930:intron | 45.0% | |
| GAACCTGGTTGCATTGTGAA+GGG | - | chr3_2:70971305-70971324 | Msa0421930:intron | 45.0% | |
| AACCTGGTTGCATTGTGAAG+GGG | - | chr3_2:70971306-70971325 | Msa0421930:intron | 45.0% | |
| TTGCATTGTGAAGGGGGATT+GGG | - | chr3_2:70971313-70971332 | Msa0421930:intron | 45.0% | |
| TCAGAGAGGAGTTCCAATTG+AGG | - | chr3_2:70971378-70971397 | Msa0421930:intron | 45.0% | |
| ! | TTCCTTTCGGCTTGTATCTC+TGG | - | chr3_2:70972029-70972048 | Msa0421930:CDS | 45.0% |
| ! | TCCTTTCGGCTTGTATCTCT+GGG | - | chr3_2:70972030-70972049 | Msa0421930:CDS | 45.0% |
| GGTCAAGTGAGTTCCCATTA+GGG | - | chr3_2:70972051-70972070 | Msa0421930:exon | 45.0% | |
| GGAACTCACTTGACCCTAAT+GGG | + | chr3_2:70972067-70972086 | None:intergenic | 45.0% | |
| !!! | CAATTATTATTTTAAATATT+TGG | - | chr3_2:70970427-70970446 | Msa0421930:intron | 5.0% |
| TGCGAGCGACATCTTGAAGA+AGG | + | chr3_2:70968982-70969001 | None:intergenic | 50.0% | |
| ! | AGATTTGGAAGTGGCGGAAG+TGG | + | chr3_2:70969064-70969083 | None:intergenic | 50.0% |
| TTCTGGCGGAGATTTGGAAG+TGG | + | chr3_2:70969073-70969092 | None:intergenic | 50.0% | |
| ATCGTCCAACCACAACCTTC+CGG | - | chr3_2:70969263-70969282 | Msa0421930:intron | 50.0% | |
| GACCGAGCTTGTCGATAAAG+AGG | - | chr3_2:70969601-70969620 | Msa0421930:intron | 50.0% | |
| GTCGTAGGCTTGGACAAAAC+AGG | + | chr3_2:70970000-70970019 | None:intergenic | 50.0% | |
| CTAGAAACTGGTCGTAGGCT+TGG | + | chr3_2:70970010-70970029 | None:intergenic | 50.0% | |
| GAAGGCTAGGTTTCGTGGTT+GGG | - | chr3_2:70970656-70970675 | Msa0421930:intron | 50.0% | |
| AAGGCTAGGTTTCGTGGTTG+GGG | - | chr3_2:70970657-70970676 | Msa0421930:intron | 50.0% | |
| ACAGTGGTTGTTGGTCCTAG+TGG | - | chr3_2:70970756-70970775 | Msa0421930:intron | 50.0% | |
| GTTGTTGGTCCTAGTGGAGT+TGG | - | chr3_2:70970762-70970781 | Msa0421930:intron | 50.0% | |
| CTAGACTTCCCAACTCCACT+AGG | + | chr3_2:70970774-70970793 | None:intergenic | 50.0% | |
| TTGAAACCTCTGCAACTCGC+TGG | + | chr3_2:70970982-70971001 | None:intergenic | 50.0% | |
| GTTTCAACAAGAAGCGGCAG+AGG | - | chr3_2:70970995-70971014 | Msa0421930:intron | 50.0% | |
| CTGCTTCCATTATCTGGAGG+GGG | - | chr3_2:70971043-70971062 | Msa0421930:intron | 50.0% | |
| TGCTTGCATCTTGGTGAACC+TGG | - | chr3_2:70971290-70971309 | Msa0421930:intron | 50.0% | |
| ACCTGGTTGCATTGTGAAGG+GGG | - | chr3_2:70971307-70971326 | Msa0421930:intron | 50.0% | |
| GTTGCATTGTGAAGGGGGAT+TGG | - | chr3_2:70971312-70971331 | Msa0421930:intron | 50.0% | |
| ACCCAGAGATACAAGCCGAA+AGG | + | chr3_2:70972034-70972053 | None:intergenic | 50.0% | |
| GGGTCAAGTGAGTTCCCATT+AGG | - | chr3_2:70972050-70972069 | Msa0421930:exon | 50.0% | |
| GGGAACTCACTTGACCCTAA+TGG | + | chr3_2:70972068-70972087 | None:intergenic | 50.0% | |
| ! | GAAGTGGTGGAGAAGTCGAG+GGG | + | chr3_2:70969048-70969067 | None:intergenic | 55.0% |
| ! | GGAAGTGGTGGAGAAGTCGA+GGG | + | chr3_2:70969049-70969068 | None:intergenic | 55.0% |
| ! | TTTGGAAGTGGCGGAAGTGG+TGG | + | chr3_2:70969061-70969080 | None:intergenic | 55.0% |
| TGGCGGAGATTTGGAAGTGG+CGG | + | chr3_2:70969070-70969089 | None:intergenic | 55.0% | |
| GGAGAGAATTGGAGCGAGAG+AGG | + | chr3_2:70969165-70969184 | None:intergenic | 55.0% | |
| AGAGAGGGGGGATTTCTTCG+CGG | + | chr3_2:70969187-70969206 | None:intergenic | 55.0% | |
| AGGTTCCGGAAGGTTGTGGT+TGG | + | chr3_2:70969271-70969290 | None:intergenic | 55.0% | |
| TGGAAGGTTCCGGAAGGTTG+TGG | + | chr3_2:70969275-70969294 | None:intergenic | 55.0% | |
| !! | AGAAGCGTCGTGGAAGGTTC+CGG | + | chr3_2:70969285-70969304 | None:intergenic | 55.0% |
| TTCCACGACGCTTCTTCCTC+CGG | - | chr3_2:70969290-70969309 | Msa0421930:intron | 55.0% | |
| GCATAGCAGTTCAGCTCCTC+CGG | + | chr3_2:70969312-70969331 | None:intergenic | 55.0% | |
| ! | CCTAGCCTTCCAGGAATCCA+TGG | + | chr3_2:70970646-70970665 | None:intergenic | 55.0% |
| CCATGGATTCCTGGAAGGCT+AGG | - | chr3_2:70970643-70970662 | Msa0421930:intron | 55.0% | |
| TCCTGGAAGGCTAGGTTTCG+TGG | - | chr3_2:70970651-70970670 | Msa0421930:intron | 55.0% | |
| ! | ACCACGAAACCTAGCCTTCC+AGG | + | chr3_2:70970655-70970674 | None:intergenic | 55.0% |
| GGAAGGCTAGGTTTCGTGGT+TGG | - | chr3_2:70970655-70970674 | Msa0421930:intron | 55.0% | |
| TCCCCCTTCACAATGCAACC+AGG | + | chr3_2:70971311-70971330 | None:intergenic | 55.0% | |
| ! | CGGAAGTGGTGGAGAAGTCG+AGG | + | chr3_2:70969050-70969069 | None:intergenic | 60.0% |
| GAGAGGGGGGATTTCTTCGC+GGG | + | chr3_2:70969186-70969205 | None:intergenic | 60.0% | |
| CTTGGGATTCGGAGAGAGGG+GGG | + | chr3_2:70969199-70969218 | None:intergenic | 60.0% | |
| GCTTGGGATTCGGAGAGAGG+GGG | + | chr3_2:70969200-70969219 | None:intergenic | 60.0% | |
| GGCTTGGGATTCGGAGAGAG+GGG | + | chr3_2:70969201-70969220 | None:intergenic | 60.0% | |
| ! | CGGCTTGGGATTCGGAGAGA+GGG | + | chr3_2:70969202-70969221 | None:intergenic | 60.0% |
| ! | ACGGCTTGGGATTCGGAGAG+AGG | + | chr3_2:70969203-70969222 | None:intergenic | 60.0% |
| CTCTCCGAATCCCAAGCCGT+CGG | - | chr3_2:70969203-70969222 | Msa0421930:CDS | 60.0% | |
| !! | GGAGGAAGAAGCGTCGTGGA+AGG | + | chr3_2:70969291-70969310 | None:intergenic | 60.0% |
| TAGCAGTTCAGCTCCTCCGG+AGG | + | chr3_2:70969309-70969328 | None:intergenic | 60.0% | |
| TGACGACCAGCGAGTTGCAG+AGG | - | chr3_2:70970973-70970992 | Msa0421930:intron | 60.0% | |
| GAGGACTGAGCGAGCGAGAG+AGG | + | chr3_2:70968872-70968891 | None:intergenic | 65.0% | |
| CATCATCCGCCACCACCGCA+CGG | - | chr3_2:70969010-70969029 | Msa0421930:three_prime_UTR | 65.0% | |
| ! | GTGGTGGAGAAGTCGAGGGG+CGG | + | chr3_2:70969045-70969064 | None:intergenic | 65.0% |
| ! | GACGCCGACGGCTTGGGATT+CGG | + | chr3_2:70969210-70969229 | None:intergenic | 65.0% |
| GGAAGAAGCGACGACGCCGA+CGG | + | chr3_2:70969222-70969241 | None:intergenic | 65.0% | |
| GCGTCGTGGAAGGTTCCGGA+AGG | + | chr3_2:70969281-70969300 | None:intergenic | 65.0% | |
| !! | CTCCGGAGGAAGAAGCGTCG+TGG | + | chr3_2:70969295-70969314 | None:intergenic | 65.0% |
| CACGACGCTTCTTCCTCCGG+AGG | - | chr3_2:70969293-70969312 | Msa0421930:intron | 65.0% | |
| !! | CGTGCGGTGGTGGCGGATGA+TGG | + | chr3_2:70969012-70969031 | None:intergenic | 70.0% |
| GTGGAGAAGTCGAGGGGCGG+CGG | + | chr3_2:70969042-70969061 | None:intergenic | 70.0% | |
| AGCGACGACGCCGACGGCTT+GGG | + | chr3_2:70969216-70969235 | None:intergenic | 70.0% | |
| AAGCGACGACGCCGACGGCT+TGG | + | chr3_2:70969217-70969236 | None:intergenic | 70.0% | |
| CATCCGCCACCACCGCACGG+TGG | - | chr3_2:70969013-70969032 | Msa0421930:three_prime_UTR | 75.0% | |
| ! | TGGCCACCGTGCGGTGGTGG+CGG | + | chr3_2:70969019-70969038 | None:intergenic | 75.0% |
| GAGAAGTCGAGGGGCGGCGG+TGG | + | chr3_2:70969039-70969058 | None:intergenic | 75.0% | |
| ! | CGGTGGCCACCGTGCGGTGG+TGG | + | chr3_2:70969022-70969041 | None:intergenic | 80.0% |
| ! | CGGCGGTGGCCACCGTGCGG+TGG | + | chr3_2:70969025-70969044 | None:intergenic | 85.0% |
| ! | GGGCGGCGGTGGCCACCGTG+CGG | + | chr3_2:70969028-70969047 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 70968765 | 70972287 | 70968765 | ID=Msa0421930;Name=Msa0421930 |
| chr3_2 | mRNA | 70968765 | 70972287 | 70968765 | ID=Msa0421930-mRNA-1;Parent=Msa0421930;Name=Msa0421930-mRNA-1;_AED=0.09;_eAED=0.09;_QI=225|1|1|1|1|1|5|306|471 |
| chr3_2 | exon | 70968765 | 70969242 | 70968765 | ID=Msa0421930-mRNA-1:exon:17153;Parent=Msa0421930-mRNA-1 |
| chr3_2 | exon | 70969620 | 70969813 | 70969620 | ID=Msa0421930-mRNA-1:exon:17152;Parent=Msa0421930-mRNA-1 |
| chr3_2 | exon | 70969905 | 70970099 | 70969905 | ID=Msa0421930-mRNA-1:exon:17151;Parent=Msa0421930-mRNA-1 |
| chr3_2 | exon | 70970189 | 70970410 | 70970189 | ID=Msa0421930-mRNA-1:exon:17150;Parent=Msa0421930-mRNA-1 |
| chr3_2 | exon | 70971430 | 70972287 | 70971430 | ID=Msa0421930-mRNA-1:exon:17149;Parent=Msa0421930-mRNA-1 |
| chr3_2 | five_prime_UTR | 70972063 | 70972287 | 70972063 | ID=Msa0421930-mRNA-1:five_prime_utr;Parent=Msa0421930-mRNA-1 |
| chr3_2 | CDS | 70971430 | 70972062 | 70971430 | ID=Msa0421930-mRNA-1:cds;Parent=Msa0421930-mRNA-1 |
| chr3_2 | CDS | 70970189 | 70970410 | 70970189 | ID=Msa0421930-mRNA-1:cds;Parent=Msa0421930-mRNA-1 |
| chr3_2 | CDS | 70969905 | 70970099 | 70969905 | ID=Msa0421930-mRNA-1:cds;Parent=Msa0421930-mRNA-1 |
| chr3_2 | CDS | 70969620 | 70969813 | 70969620 | ID=Msa0421930-mRNA-1:cds;Parent=Msa0421930-mRNA-1 |
| chr3_2 | CDS | 70969071 | 70969242 | 70969071 | ID=Msa0421930-mRNA-1:cds;Parent=Msa0421930-mRNA-1 |
| chr3_2 | three_prime_UTR | 70968765 | 70969070 | 70968765 | ID=Msa0421930-mRNA-1:three_prime_utr;Parent=Msa0421930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
