Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426710 | GAU24464.1 | 69.697 | 66 | 20 | 0 | 4 | 69 | 8 | 73 | 8.70e-22 | 102 |
| Msa0426710 | GAU24464.1 | 71.795 | 156 | 7 | 1 | 72 | 190 | 225 | 380 | 6.88e-67 | 220 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426710 | sp|Q8VXZ7|AGAL3_ARATH | 45.455 | 176 | 38 | 2 | 72 | 189 | 228 | 403 | 6.21e-36 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426710 | A0A2Z6LXD1 | 69.697 | 66 | 20 | 0 | 4 | 69 | 8 | 73 | 4.16e-22 | 102 |
| Msa0426710 | A0A2Z6LXD1 | 71.795 | 156 | 7 | 1 | 72 | 190 | 225 | 380 | 3.29e-67 | 220 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0426710 | Msa0600430 | 0.802543 | 5.338410e-49 | -8.615850e-47 |
| Msa0426710 | Msa0663920 | 0.805594 | 1.238000e-49 | -8.615850e-47 |
| Msa0426710 | Msa1075220 | -0.803073 | 4.149318e-49 | -8.615850e-47 |
| Msa0426710 | Msa1188710 | 0.810318 | 1.223342e-50 | -8.615850e-47 |
| Msa0426710 | Msa1284680 | 0.806809 | 6.869874e-50 | -8.615850e-47 |
| Msa0426710 | Msa1284710 | 0.801763 | 7.723971e-49 | -8.615850e-47 |
| Msa0426710 | Msa1341950 | 0.801270 | 9.744886e-49 | -8.615850e-47 |
| Msa0426710 | Msa1372760 | 0.825813 | 3.819159e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426710 | MtrunA17_Chr3g0128871 | 55.618 | 178 | 21 | 2 | 72 | 191 | 224 | 401 | 4.61e-51 | 169 |
| Msa0426710 | MtrunA17_Chr3g0128871 | 93.056 | 72 | 2 | 1 | 1 | 69 | 1 | 72 | 2.04e-37 | 134 |
| Msa0426710 | MtrunA17_Chr7g0245111 | 35.465 | 172 | 55 | 3 | 76 | 191 | 212 | 383 | 6.12e-24 | 97.4 |
| Msa0426710 | MtrunA17_Chr7g0245121 | 34.302 | 172 | 57 | 3 | 76 | 191 | 211 | 382 | 3.49e-22 | 92.4 |
| Msa0426710 | MtrunA17_Chr1g0188751 | 35.450 | 189 | 61 | 3 | 58 | 188 | 200 | 385 | 2.53e-21 | 90.1 |
| Msa0426710 | MtrunA17_Chr6g0485451 | 36.571 | 175 | 50 | 4 | 72 | 188 | 20 | 191 | 3.49e-21 | 87.0 |
| Msa0426710 | MtrunA17_Chr6g0478231 | 34.857 | 175 | 53 | 3 | 72 | 188 | 222 | 393 | 3.53e-21 | 89.7 |
| Msa0426710 | MtrunA17_Chr1g0188761 | 34.392 | 189 | 63 | 3 | 58 | 188 | 196 | 381 | 3.87e-20 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426710 | AT3G56310.2 | 45.455 | 176 | 38 | 2 | 72 | 189 | 204 | 379 | 3.69e-37 | 133 |
| Msa0426710 | AT3G56310.1 | 45.455 | 176 | 38 | 2 | 72 | 189 | 228 | 403 | 6.31e-37 | 133 |
| Msa0426710 | AT5G08370.1 | 34.392 | 189 | 63 | 3 | 58 | 188 | 182 | 367 | 4.27e-21 | 89.7 |
| Msa0426710 | AT5G08370.2 | 34.392 | 189 | 63 | 3 | 58 | 188 | 156 | 341 | 5.37e-21 | 89.4 |
| Msa0426710 | AT5G08380.2 | 67.391 | 46 | 15 | 0 | 76 | 121 | 214 | 259 | 3.66e-15 | 72.4 |
| Msa0426710 | AT5G08380.1 | 67.391 | 46 | 15 | 0 | 76 | 121 | 214 | 259 | 4.29e-15 | 72.8 |
Find 59 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAAATTTGATCTGAAAA+AGG | 0.191107 | 3_2:-77191564 | None:intergenic |
| CAACTTGAACTTTCCTTCCT+TGG | 0.282948 | 3_2:-77195087 | None:intergenic |
| ATCGTTTGGCTGTTGCTCTT+TGG | 0.288869 | 3_2:+77195418 | Msa0426710:CDS |
| ATTTATGATACTTCAAACTA+TGG | 0.351833 | 3_2:+77191590 | Msa0426710:CDS |
| GAAGCACTTGGGCTTGAATC+TGG | 0.353679 | 3_2:+77195480 | Msa0426710:CDS |
| GTTCAAGTTGCTGGAATAGA+TGG | 0.358856 | 3_2:+77195100 | Msa0426710:CDS |
| GGGTTTCAACAAAAGTGTTT+TGG | 0.365525 | 3_2:+77191454 | Msa0426710:CDS |
| GTGTTGACGATCCTGCTCTA+TGG | 0.368509 | 3_2:+77194291 | Msa0426710:CDS |
| GCCAAACGATTTCCTGATAA+AGG | 0.371429 | 3_2:-77195405 | None:intergenic |
| CAGGATATAAATCGAATCTT+AGG | 0.373667 | 3_2:-77191372 | None:intergenic |
| GTCTGGGCAGGTCCTTTATC+AGG | 0.376851 | 3_2:+77195393 | Msa0426710:CDS |
| GGAAGGAAAGTTCAAGTTGC+TGG | 0.382276 | 3_2:+77195091 | Msa0426710:CDS |
| CAACCTCTCTTGCAAAATTA+CGG | 0.400150 | 3_2:+77191536 | Msa0426710:CDS |
| TCCTTTATCAGGAAATCGTT+TGG | 0.403234 | 3_2:+77195404 | Msa0426710:CDS |
| CTGGAATTCATGTTTCTGTA+AGG | 0.406758 | 3_2:+77195499 | Msa0426710:CDS |
| CTTTCAGCTTAGTAATGGTT+TGG | 0.407840 | 3_2:+77191616 | Msa0426710:CDS |
| TGGGCTGCATATGCCGGTCC+TGG | 0.417041 | 3_2:+77194546 | Msa0426710:CDS |
| CCGATGACATCAATGATACA+TGG | 0.456542 | 3_2:+77194345 | Msa0426710:CDS |
| ATCGAATCTTAGGAACTGTC+TGG | 0.460170 | 3_2:-77191362 | None:intergenic |
| ATGTTTCTGTAAGGGATTTG+TGG | 0.463443 | 3_2:+77195508 | Msa0426710:CDS |
| TTTGGCTCTTACACCTCAGA+TGG | 0.469476 | 3_2:+77191634 | Msa0426710:CDS |
| CAGGCACAGTTGGTAATAGT+TGG | 0.471145 | 3_2:+77194315 | Msa0426710:CDS |
| GACCGATGGGCTGCATATGC+CGG | 0.472336 | 3_2:+77194540 | Msa0426710:CDS |
| GCTCTATGGGCAGGCACAGT+TGG | 0.473297 | 3_2:+77194305 | Msa0426710:CDS |
| TTCTGTAAGGGATTTGTGGC+AGG | 0.477206 | 3_2:+77195512 | Msa0426710:CDS |
| TGTCTCTCTGCAGACTCACT+TGG | 0.485221 | 3_2:+77195061 | Msa0426710:intron |
| TTGGCTCTTACACCTCAGAT+GGG | 0.492424 | 3_2:+77191635 | Msa0426710:CDS |
| TGTTGACGATCCTGCTCTAT+GGG | 0.493096 | 3_2:+77194292 | Msa0426710:CDS |
| GACGATCCTGCTCTATGGGC+AGG | 0.495630 | 3_2:+77194296 | Msa0426710:CDS |
| TGACAAAATGATCGTAGAAT+CGG | 0.502328 | 3_2:+77191027 | Msa0426710:five_prime_UTR |
| TGGAATAGATGGTTGTAGTC+AGG | 0.503086 | 3_2:+77195111 | Msa0426710:CDS |
| GGCGTCTTTCAGCTTAGTAA+TGG | 0.504608 | 3_2:+77191611 | Msa0426710:CDS |
| TGGAATTCATGTTTCTGTAA+GGG | 0.508255 | 3_2:+77195500 | Msa0426710:CDS |
| CATATGCCGGTCCTGGAGGA+TGG | 0.519568 | 3_2:+77194553 | Msa0426710:CDS |
| TTGCTGATCTTAATGACCGA+TGG | 0.521286 | 3_2:+77194526 | Msa0426710:CDS |
| ATTTATTTACAGGTCTGGGC+AGG | 0.524714 | 3_2:+77195381 | Msa0426710:intron |
| ACAGCATCATGGGAAGCACT+TGG | 0.535584 | 3_2:+77195468 | Msa0426710:CDS |
| TTGCGACTATAACAGCATCA+TGG | 0.540422 | 3_2:+77195457 | Msa0426710:CDS |
| GGTGTACCATTCCATCCTCC+AGG | 0.542408 | 3_2:-77194564 | None:intergenic |
| ACCATTCCATCCTCCAGGAC+CGG | 0.542782 | 3_2:-77194559 | None:intergenic |
| GCCGGTCCTGGAGGATGGAA+TGG | 0.543310 | 3_2:+77194558 | Msa0426710:CDS |
| ATCTTAGGAACTGTCTGGAA+TGG | 0.543326 | 3_2:-77191357 | None:intergenic |
| GCAGACTCACTTGGAGTCCA+AGG | 0.547998 | 3_2:+77195070 | Msa0426710:intron |
| TGCTGATCTTAATGACCGAT+GGG | 0.548796 | 3_2:+77194527 | Msa0426710:CDS |
| ACTGTGCCTGCCCATAGAGC+AGG | 0.551108 | 3_2:-77194302 | None:intergenic |
| TGCGACTATAACAGCATCAT+GGG | 0.557475 | 3_2:+77195458 | Msa0426710:CDS |
| GTGCAATGCAACACGGTCAC+AGG | 0.557480 | 3_2:-77191391 | None:intergenic |
| CCATGTATCATTGATGTCAT+CGG | 0.571669 | 3_2:-77194345 | None:intergenic |
| CAGCATCATGGGAAGCACTT+GGG | 0.579469 | 3_2:+77195469 | Msa0426710:CDS |
| GACCGGCATATGCAGCCCAT+CGG | 0.586985 | 3_2:-77194542 | None:intergenic |
| TGGCTCTTACACCTCAGATG+GGG | 0.592508 | 3_2:+77191636 | Msa0426710:CDS |
| ACTCACTTGGAGTCCAAGGA+AGG | 0.601676 | 3_2:+77195074 | Msa0426710:CDS |
| CGATGACATCAATGATACAT+GGG | 0.614007 | 3_2:+77194346 | Msa0426710:CDS |
| ATCGGAGAATATTACACGAG+AGG | 0.628929 | 3_2:+77191045 | Msa0426710:five_prime_UTR |
| ACATCAATGATACATGGGCA+AGG | 0.643423 | 3_2:+77194351 | Msa0426710:CDS |
| ATAGAAACAAACCCCATCTG+AGG | 0.650282 | 3_2:-77191647 | None:intergenic |
| CATGAATGACGATATACTTG+CGG | 0.651713 | 3_2:-77191076 | None:intergenic |
| ATGAAAAGTGCAATGCAACA+CGG | 0.682572 | 3_2:-77191398 | None:intergenic |
| GCTGCATATGCCGGTCCTGG+AGG | 0.687897 | 3_2:+77194549 | Msa0426710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTAAAAAAAAAAAAAA+GGG | - | chr3_2:77194930-77194949 | None:intergenic | 0.0% |
| !! | TTATATTAAAAAAAAAAAAA+AGG | - | chr3_2:77194931-77194950 | None:intergenic | 0.0% |
| !!! | TTTTAATACAAAAAAAACTT+CGG | - | chr3_2:77191143-77191162 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTTTTTTTGA+CGG | - | chr3_2:77191240-77191259 | None:intergenic | 10.0% |
| !! | AATAAAATAAAATTCAATTC+TGG | - | chr3_2:77191732-77191751 | None:intergenic | 10.0% |
| !! | CAAATATATAAATATAGAAT+AGG | - | chr3_2:77192468-77192487 | None:intergenic | 10.0% |
| !!! | TTATTTCTTAAATATATCAA+AGG | - | chr3_2:77192746-77192765 | None:intergenic | 10.0% |
| !! | TAATTAAATTTCAAAAAGAT+AGG | - | chr3_2:77194588-77194607 | None:intergenic | 10.0% |
| !! | TAAATAAATATGTAAAACTA+AGG | - | chr3_2:77195370-77195389 | None:intergenic | 10.0% |
| !!! | AATCTTTAATATTTCATTTT+GGG | - | chr3_2:77196816-77196835 | None:intergenic | 10.0% |
| !!! | AAATCTTTAATATTTCATTT+TGG | - | chr3_2:77196817-77196836 | None:intergenic | 10.0% |
| !! | AATGAAATATTAAAGATTTA+TGG | + | chr3_2:77196818-77196837 | Msa0426710:intron | 10.0% |
| !! | AAATGAATATTAAAGATTTA+TGG | + | chr3_2:77196882-77196901 | Msa0426710:intron | 10.0% |
| !! | AATGAATATTAAAGATTTAT+GGG | + | chr3_2:77196883-77196902 | Msa0426710:intron | 10.0% |
| !! | CAATTGATCAAATAAATTTA+TGG | + | chr3_2:77191682-77191701 | Msa0426710:intron | 15.0% |
| !!! | AATAAGTTGAAAACATATTA+TGG | - | chr3_2:77191920-77191939 | None:intergenic | 15.0% |
| !! | AATATTAAAATTGTAACAGT+GGG | + | chr3_2:77192439-77192458 | Msa0426710:intron | 15.0% |
| !! | AATTCTTAAATGAAAATGAA+TGG | + | chr3_2:77193572-77193591 | Msa0426710:intron | 15.0% |
| !! | ACTACATTATAAACAAAATT+TGG | - | chr3_2:77194460-77194479 | None:intergenic | 15.0% |
| !! | ATTAAAAAAAAAAAAAAGGG+TGG | - | chr3_2:77194927-77194946 | None:intergenic | 15.0% |
| !! | TTCATTTATCTTATTCAAAA+AGG | + | chr3_2:77195012-77195031 | Msa0426710:intron | 15.0% |
| !! | TTTCAATTAAAATAAGTGTA+TGG | - | chr3_2:77195260-77195279 | None:intergenic | 15.0% |
| !!! | AGTTTTACATATTTATTTAC+AGG | + | chr3_2:77195371-77195390 | Msa0426710:intron | 15.0% |
| !! | AGAAAATAAGTTTAGAAAAT+AGG | - | chr3_2:77195609-77195628 | None:intergenic | 15.0% |
| !! | AAATACTAAAAGTAATTAGA+CGG | - | chr3_2:77195633-77195652 | None:intergenic | 15.0% |
| !!! | CTAATTACTTTTAGTATTTA+AGG | + | chr3_2:77195634-77195653 | Msa0426710:intron | 15.0% |
| !! | AATATTAAAGATTTATGGTA+TGG | + | chr3_2:77196823-77196842 | Msa0426710:intron | 15.0% |
| !!! | AGTACTATTATTATTTGTTG+AGG | - | chr3_2:77191213-77191232 | None:intergenic | 20.0% |
| !! | ATAGAAAATAGAAACAATGA+AGG | + | chr3_2:77191269-77191288 | Msa0426710:intron | 20.0% |
| !! | TTAACATGAATATACTTATG+TGG | + | chr3_2:77191301-77191320 | Msa0426710:intron | 20.0% |
| !! | TGAAAATTTGATCTGAAAAA+GGG | - | chr3_2:77191566-77191585 | None:intergenic | 20.0% |
| !! | ATTTATGATACTTCAAACTA+TGG | + | chr3_2:77191590-77191609 | Msa0426710:CDS | 20.0% |
| !! | AAGTTGTTCTATAAGTATTA+TGG | - | chr3_2:77191955-77191974 | None:intergenic | 20.0% |
| !! | AAATTCTATATCAAGTCAAA+AGG | - | chr3_2:77192147-77192166 | None:intergenic | 20.0% |
| !! | AAGTTCTTTATTAAGTCAAA+AGG | + | chr3_2:77192229-77192248 | Msa0426710:intron | 20.0% |
| !! | AACATATATATCACTCTTAA+CGG | - | chr3_2:77192264-77192283 | None:intergenic | 20.0% |
| !! | TTAAGAGTGATATATATGTT+TGG | + | chr3_2:77192264-77192283 | Msa0426710:intron | 20.0% |
| !!! | CACTGTTACAATTTTAATAT+TGG | - | chr3_2:77192440-77192459 | None:intergenic | 20.0% |
| !! | CAATATTAAAATTGTAACAG+TGG | + | chr3_2:77192438-77192457 | Msa0426710:intron | 20.0% |
| !!! | CATATGTTAATGTTATGTTT+TGG | + | chr3_2:77192682-77192701 | Msa0426710:intron | 20.0% |
| !! | TACTTTCACAAAATTATACA+TGG | + | chr3_2:77193115-77193134 | Msa0426710:intron | 20.0% |
| !!! | CAGCATAATATATCTTTTTA+TGG | + | chr3_2:77193433-77193452 | Msa0426710:intron | 20.0% |
| !!! | TCAATGATTGATAACTATTA+AGG | - | chr3_2:77193607-77193626 | None:intergenic | 20.0% |
| !! | ATAGTTATCAATCATTGAAA+TGG | + | chr3_2:77193609-77193628 | Msa0426710:intron | 20.0% |
| !! | CTTCATAAATAAATAGTTTG+CGG | + | chr3_2:77193912-77193931 | Msa0426710:intron | 20.0% |
| !! | TGATTCAATTTATATGTACT+AGG | - | chr3_2:77194097-77194116 | None:intergenic | 20.0% |
| !! | ACATATAAATTGAATCAATG+TGG | + | chr3_2:77194100-77194119 | Msa0426710:intron | 20.0% |
| !!! | TTTTGTTATGAGTTTACTTA+CGG | + | chr3_2:77194223-77194242 | Msa0426710:intron | 20.0% |
| !! | TGCAAAAACAATAGTATAAT+GGG | - | chr3_2:77194268-77194287 | None:intergenic | 20.0% |
| !!! | ATTATACTATTGTTTTTGCA+GGG | + | chr3_2:77194268-77194287 | Msa0426710:intron | 20.0% |
| !! | ATTATAAACAAAATTTGGAC+AGG | - | chr3_2:77194455-77194474 | None:intergenic | 20.0% |
| !! | TGTTCATAATAACAATACTA+TGG | + | chr3_2:77194762-77194781 | Msa0426710:intron | 20.0% |
| !!! | TTAATATAAGTTGATGCTTA+AGG | + | chr3_2:77194942-77194961 | Msa0426710:intron | 20.0% |
| !! | AAATGAAAAAATTATACACC+AGG | - | chr3_2:77194999-77195018 | None:intergenic | 20.0% |
| !!! | TAGTACTATAACTTTAAGTT+GGG | - | chr3_2:77195328-77195347 | None:intergenic | 20.0% |
| !!! | TTTTAGTTTCTCTTCTTAAA+AGG | + | chr3_2:77196144-77196163 | Msa0426710:intron | 20.0% |
| !! | TTCAATAAGTTATCACAAAT+GGG | + | chr3_2:77196402-77196421 | Msa0426710:intron | 20.0% |
| !! | TAGTGTATCATATATCAATT+GGG | - | chr3_2:77196430-77196449 | None:intergenic | 20.0% |
| !! | TTAGTGTATCATATATCAAT+TGG | - | chr3_2:77196431-77196450 | None:intergenic | 20.0% |
| !! | CTCTTGATTAATAAATAGAT+CGG | - | chr3_2:77196693-77196712 | None:intergenic | 20.0% |
| !! | AATATTAAAGATTTATGGGA+TGG | + | chr3_2:77196887-77196906 | Msa0426710:intron | 20.0% |
| !!! | TGGAAAAAAGTTTTATTTTC+TGG | + | chr3_2:77196972-77196991 | Msa0426710:intron | 20.0% |
| !!! | TGAAACTGTTTTGTTACTAA+TGG | + | chr3_2:77191433-77191452 | Msa0426710:exon | 25.0% |
| !!! | GAAACTGTTTTGTTACTAAT+GGG | + | chr3_2:77191434-77191453 | Msa0426710:exon | 25.0% |
| ! | GTGAAAATTTGATCTGAAAA+AGG | - | chr3_2:77191567-77191586 | None:intergenic | 25.0% |
| ! | ATTTATGTGACATGATGATT+TGG | + | chr3_2:77191776-77191795 | Msa0426710:intron | 25.0% |
| ! | TATCAATGAAACGGTTATTA+AGG | + | chr3_2:77191839-77191858 | Msa0426710:intron | 25.0% |
| ! | TATGCTATAAGTGCTTAATT+AGG | + | chr3_2:77192058-77192077 | Msa0426710:intron | 25.0% |
| ! | TGGATTGTTATGATGATTAA+CGG | + | chr3_2:77192112-77192131 | Msa0426710:intron | 25.0% |
| ! | GCAAAATAAAATCTTGATGA+AGG | + | chr3_2:77192197-77192216 | Msa0426710:intron | 25.0% |
| ! | TTCTGTGACAAGAAATTTAA+AGG | + | chr3_2:77192524-77192543 | Msa0426710:intron | 25.0% |
| ! | GTATATTCAGTGATATCAAA+AGG | - | chr3_2:77192566-77192585 | None:intergenic | 25.0% |
| ! | ATATCACTGAATATACTTGA+GGG | + | chr3_2:77192570-77192589 | Msa0426710:intron | 25.0% |
| ! | GTTCCTTACTATATTTGATT+TGG | + | chr3_2:77192974-77192993 | Msa0426710:intron | 25.0% |
| ! | CTTCCAAATCAAATATAGTA+AGG | - | chr3_2:77192980-77192999 | None:intergenic | 25.0% |
| !!! | TATATTTGATTTGGAAGTGT+AGG | + | chr3_2:77192983-77193002 | Msa0426710:intron | 25.0% |
| !!! | ATATTTGATTTGGAAGTGTA+GGG | + | chr3_2:77192984-77193003 | Msa0426710:intron | 25.0% |
| ! | AAGTTAGTCATAATGAACAT+GGG | - | chr3_2:77193164-77193183 | None:intergenic | 25.0% |
| ! | AAAGTTAGTCATAATGAACA+TGG | - | chr3_2:77193165-77193184 | None:intergenic | 25.0% |
| !! | TTTTTCATGTAACCAAGTTT+AGG | - | chr3_2:77193772-77193791 | None:intergenic | 25.0% |
| ! | ACTATTTATTTATGAAGCAG+CGG | - | chr3_2:77193909-77193928 | None:intergenic | 25.0% |
| ! | TGATAAAATTATAGAATGGG+AGG | - | chr3_2:77193971-77193990 | None:intergenic | 25.0% |
| !! | TCCCATTCTATAATTTTATC+AGG | + | chr3_2:77193970-77193989 | Msa0426710:intron | 25.0% |
| ! | CCCTGATAAAATTATAGAAT+GGG | - | chr3_2:77193974-77193993 | None:intergenic | 25.0% |
| !! | CCCATTCTATAATTTTATCA+GGG | + | chr3_2:77193971-77193990 | Msa0426710:intron | 25.0% |
| ! | ACCCTGATAAAATTATAGAA+TGG | - | chr3_2:77193975-77193994 | None:intergenic | 25.0% |
| ! | TATGACAATTGTTACAATCT+CGG | + | chr3_2:77194010-77194029 | Msa0426710:intron | 25.0% |
| ! | CTGCAAAAACAATAGTATAA+TGG | - | chr3_2:77194269-77194288 | None:intergenic | 25.0% |
| !!! | CATTATACTATTGTTTTTGC+AGG | + | chr3_2:77194267-77194286 | Msa0426710:intron | 25.0% |
| !!! | TTATACTATTGTTTTTGCAG+GGG | + | chr3_2:77194269-77194288 | Msa0426710:intron | 25.0% |
| !! | TGGTTCATTCAACATTTTAT+TGG | + | chr3_2:77194401-77194420 | Msa0426710:intron | 25.0% |
| !! | GGTTCATTCAACATTTTATT+GGG | + | chr3_2:77194402-77194421 | Msa0426710:intron | 25.0% |
| !! | GTTCATTCAACATTTTATTG+GGG | + | chr3_2:77194403-77194422 | Msa0426710:intron | 25.0% |
| ! | GCTTAAAATTTCGAATGTTT+CGG | - | chr3_2:77194870-77194889 | None:intergenic | 25.0% |
| !! | TTCTTGTTTATATTGTTACC+TGG | + | chr3_2:77194978-77194997 | Msa0426710:intron | 25.0% |
| ! | TCAAAAAGGTTAAATGAGTA+AGG | + | chr3_2:77195026-77195045 | Msa0426710:intron | 25.0% |
| ! | TTCAGACTTCTAGATATTTA+TGG | - | chr3_2:77195218-77195237 | None:intergenic | 25.0% |
| !!! | TGAAATTATTTTTCCACAAC+TGG | + | chr3_2:77195234-77195253 | Msa0426710:intron | 25.0% |
| ! | GTAGTACTATAACTTTAAGT+TGG | - | chr3_2:77195329-77195348 | None:intergenic | 25.0% |
| ! | TACATATTTATTTACAGGTC+TGG | + | chr3_2:77195376-77195395 | Msa0426710:intron | 25.0% |
| ! | ACATATTTATTTACAGGTCT+GGG | + | chr3_2:77195377-77195396 | Msa0426710:intron | 25.0% |
| ! | AGTACACAATTTATTTGTGA+TGG | - | chr3_2:77195964-77195983 | None:intergenic | 25.0% |
| ! | ATTGTGTACTGTATATATGA+TGG | + | chr3_2:77195974-77195993 | Msa0426710:intron | 25.0% |
| ! | AAAAACATCATAAATCCATC+CGG | - | chr3_2:77196050-77196069 | None:intergenic | 25.0% |
| ! | AAATTATCATGTTCTCTCTT+TGG | - | chr3_2:77196103-77196122 | None:intergenic | 25.0% |
| ! | TATTTAAATCCCCTAAACAA+AGG | + | chr3_2:77196257-77196276 | Msa0426710:intron | 25.0% |
| !! | AAATATGCAACCTTTGTTTA+GGG | - | chr3_2:77196270-77196289 | None:intergenic | 25.0% |
| !! | TAAATATGCAACCTTTGTTT+AGG | - | chr3_2:77196271-77196290 | None:intergenic | 25.0% |
| ! | GTTCAATAAGTTATCACAAA+TGG | + | chr3_2:77196401-77196420 | Msa0426710:intron | 25.0% |
| ! | TTGAAAAAATTATTAGCCCA+AGG | - | chr3_2:77196593-77196612 | None:intergenic | 25.0% |
| !!! | AAAGTTTTATTTTCTGGTCA+AGG | + | chr3_2:77196978-77196997 | Msa0426710:intron | 25.0% |
| TGACAAAATGATCGTAGAAT+CGG | + | chr3_2:77191027-77191046 | Msa0426710:five_prime_UTR | 30.0% | |
| CAGGATATAAATCGAATCTT+AGG | - | chr3_2:77191375-77191394 | None:intergenic | 30.0% | |
| TGCATGCAATATCAATGAAA+CGG | + | chr3_2:77191830-77191849 | Msa0426710:intron | 30.0% | |
| GCATTTGAAAATCTTGATGA+AGG | - | chr3_2:77192179-77192198 | None:intergenic | 30.0% | |
| GATATCACTGAATATACTTG+AGG | + | chr3_2:77192569-77192588 | Msa0426710:intron | 30.0% | |
| !!! | AATGTTATGTTTTGGCTAAG+TGG | + | chr3_2:77192690-77192709 | Msa0426710:intron | 30.0% |
| TGCACTATTCAATTTCTATG+TGG | + | chr3_2:77192886-77192905 | Msa0426710:intron | 30.0% | |
| !!! | AACTTTTTCACTTCCTACTT+AGG | + | chr3_2:77193179-77193198 | Msa0426710:intron | 30.0% |
| !!! | ACTTTTTCACTTCCTACTTA+GGG | + | chr3_2:77193180-77193199 | Msa0426710:intron | 30.0% |
| ATATTAGAATCTAACCCAAG+AGG | - | chr3_2:77193269-77193288 | None:intergenic | 30.0% | |
| TGAACAACACTTCTATTCTT+AGG | - | chr3_2:77193336-77193355 | None:intergenic | 30.0% | |
| CATCAGATGTAATTTAAACC+TGG | - | chr3_2:77193396-77193415 | None:intergenic | 30.0% | |
| ! | TATCTTTTTATGGTGTCTGT+TGG | + | chr3_2:77193443-77193462 | Msa0426710:intron | 30.0% |
| AATGAGAACATCATATCCAA+AGG | - | chr3_2:77193492-77193511 | None:intergenic | 30.0% | |
| CATTAACACCAAACTGAATT+TGG | + | chr3_2:77193520-77193539 | Msa0426710:intron | 30.0% | |
| TACGATGTTAAGTCGTTTAA+TGG | + | chr3_2:77193549-77193568 | Msa0426710:intron | 30.0% | |
| GGTAAAATGATACCTAAACT+TGG | + | chr3_2:77193757-77193776 | Msa0426710:intron | 30.0% | |
| !!! | GAAAAAACCGTTTTTTTGGA+GGG | - | chr3_2:77194039-77194058 | None:intergenic | 30.0% |
| !!! | AGAAAAAACCGTTTTTTTGG+AGG | - | chr3_2:77194040-77194059 | None:intergenic | 30.0% |
| !!! | ACGAGAAAAAACCGTTTTTT+TGG | - | chr3_2:77194043-77194062 | None:intergenic | 30.0% |
| ! | TTTTCTATTCGATCTGTGAA+TGG | + | chr3_2:77194182-77194201 | Msa0426710:intron | 30.0% |
| !! | GAGATAAGTAAGACTTTTTC+TGG | - | chr3_2:77194626-77194645 | None:intergenic | 30.0% |
| TAAAATTTCGAATGTTTCGG+CGG | - | chr3_2:77194867-77194886 | None:intergenic | 30.0% | |
| TAGCTTCTAACTTCTATACT+CGG | - | chr3_2:77195287-77195306 | None:intergenic | 30.0% | |
| ! | TGGAATTCATGTTTCTGTAA+GGG | + | chr3_2:77195500-77195519 | Msa0426710:CDS | 30.0% |
| TCTTTCCATTTGTTCTTAGT+TGG | + | chr3_2:77195571-77195590 | Msa0426710:intron | 30.0% | |
| TTTAGCCAACTAAGAACAAA+TGG | - | chr3_2:77195579-77195598 | None:intergenic | 30.0% | |
| TTTGTTCTTAGTTGGCTAAA+CGG | + | chr3_2:77195579-77195598 | Msa0426710:intron | 30.0% | |
| TTATGCTGCAAAATAGTGAA+GGG | - | chr3_2:77195684-77195703 | None:intergenic | 30.0% | |
| TTGCAGCATAAGGTAATAAA+TGG | + | chr3_2:77195693-77195712 | Msa0426710:intron | 30.0% | |
| TTGTAAATCCAAAATGAGCA+TGG | + | chr3_2:77195843-77195862 | Msa0426710:intron | 30.0% | |
| AAAACATCATAAATCCATCC+GGG | - | chr3_2:77196049-77196068 | None:intergenic | 30.0% | |
| AACGTATTGTGTGAAGATTA+TGG | + | chr3_2:77196072-77196091 | Msa0426710:intron | 30.0% | |
| ! | AATATGCAACCTTTGTTTAG+GGG | - | chr3_2:77196269-77196288 | None:intergenic | 30.0% |
| CTATGAAAAGTGAGAATGAT+TGG | - | chr3_2:77196362-77196381 | None:intergenic | 30.0% | |
| !! | ATCATTCTCACTTTTCATAG+AGG | + | chr3_2:77196362-77196381 | Msa0426710:intron | 30.0% |
| ! | TCTCATTAATGCATTGATGA+TGG | - | chr3_2:77196465-77196484 | None:intergenic | 30.0% |
| TGTCAACTTAATAACGAGTT+GGG | - | chr3_2:77196532-77196551 | None:intergenic | 30.0% | |
| TTGTCAACTTAATAACGAGT+TGG | - | chr3_2:77196533-77196552 | None:intergenic | 30.0% | |
| ACGAGAGAAAAGTTATCTTA+CGG | + | chr3_2:77196733-77196752 | Msa0426710:intron | 30.0% | |
| AAATAGCGTGTCATAAGATA+GGG | - | chr3_2:77196761-77196780 | None:intergenic | 30.0% | |
| TAAATAGCGTGTCATAAGAT+AGG | - | chr3_2:77196762-77196781 | None:intergenic | 30.0% | |
| ATTTATGGTATGGAATGCAT+GGG | + | chr3_2:77196833-77196852 | Msa0426710:intron | 30.0% | |
| CAGTATCATATCATATGAGT+TGG | + | chr3_2:77196952-77196971 | Msa0426710:intron | 30.0% | |
| CATGAATGACGATATACTTG+CGG | - | chr3_2:77191079-77191098 | None:intergenic | 35.0% | |
| GAATATACTTATGTGGCAAC+CGG | + | chr3_2:77191308-77191327 | Msa0426710:intron | 35.0% | |
| ! | ATGAAAAGTGCAATGCAACA+CGG | - | chr3_2:77191401-77191420 | None:intergenic | 35.0% |
| !!! | GGGTTTCAACAAAAGTGTTT+TGG | + | chr3_2:77191454-77191473 | Msa0426710:CDS | 35.0% |
| CAACCTCTCTTGCAAAATTA+CGG | + | chr3_2:77191536-77191555 | Msa0426710:CDS | 35.0% | |
| ! | TTTCCGTAATTTTGCAAGAG+AGG | - | chr3_2:77191542-77191561 | None:intergenic | 35.0% |
| CTTTCAGCTTAGTAATGGTT+TGG | + | chr3_2:77191616-77191635 | Msa0426710:CDS | 35.0% | |
| GAAACGGTTATTAAGGAAAC+AGG | + | chr3_2:77191846-77191865 | Msa0426710:intron | 35.0% | |
| TTCAAGCTTGACAAGTCTTA+TGG | + | chr3_2:77191891-77191910 | Msa0426710:intron | 35.0% | |
| GGTTATGTGTACGTCAATAT+AGG | + | chr3_2:77192398-77192417 | Msa0426710:intron | 35.0% | |
| TTCCTCATCCAATTGAAAGT+CGG | - | chr3_2:77192647-77192666 | None:intergenic | 35.0% | |
| ATGGAAATGTCTTACGATCA+GGG | - | chr3_2:77193019-77193038 | None:intergenic | 35.0% | |
| TTGGCATATATTCTGATGCT+GGG | + | chr3_2:77193087-77193106 | Msa0426710:intron | 35.0% | |
| ! | TTTTCGTGGAAAATTGATCC+TGG | - | chr3_2:77193226-77193245 | None:intergenic | 35.0% |
| ! | GGATCAATTTTCCACGAAAA+TGG | + | chr3_2:77193226-77193245 | Msa0426710:intron | 35.0% |
| ATGCAGATTTATTTGCCTCT+TGG | + | chr3_2:77193251-77193270 | Msa0426710:intron | 35.0% | |
| TGCAGATTTATTTGCCTCTT+GGG | + | chr3_2:77193252-77193271 | Msa0426710:intron | 35.0% | |
| ATTCTATGTGTGCATTTCAC+AGG | + | chr3_2:77193365-77193384 | Msa0426710:intron | 35.0% | |
| !!! | GGTGTCTGTTGGATTTTTTA+AGG | + | chr3_2:77193454-77193473 | Msa0426710:intron | 35.0% |
| AAGGAAATAAAACCAGCCTT+TGG | + | chr3_2:77193473-77193492 | Msa0426710:intron | 35.0% | |
| TATCTAGGCCAAATTCAGTT+TGG | - | chr3_2:77193531-77193550 | None:intergenic | 35.0% | |
| AACGACTTAACATCGTATCT+AGG | - | chr3_2:77193546-77193565 | None:intergenic | 35.0% | |
| TTGTGCAAAGATGATCTTCT+TGG | + | chr3_2:77193639-77193658 | Msa0426710:intron | 35.0% | |
| AGTGGACATAATATCTATGG+AGG | - | chr3_2:77193692-77193711 | None:intergenic | 35.0% | |
| CACAGTGGACATAATATCTA+TGG | - | chr3_2:77193695-77193714 | None:intergenic | 35.0% | |
| AGAAACTAACTATGACACAG+TGG | - | chr3_2:77193710-77193729 | None:intergenic | 35.0% | |
| ATTCTACATACTACGAAGAG+TGG | - | chr3_2:77193816-77193835 | None:intergenic | 35.0% | |
| CGTAGTATGTAGAATGTAGA+TGG | + | chr3_2:77193821-77193840 | Msa0426710:intron | 35.0% | |
| ! | TTTGCGGTTATGTATTTCTG+TGG | + | chr3_2:77193928-77193947 | Msa0426710:intron | 35.0% |
| TTTACGACCAGTTTCATTGA+GGG | - | chr3_2:77194161-77194180 | None:intergenic | 35.0% | |
| ! | TTTTACGACCAGTTTCATTG+AGG | - | chr3_2:77194162-77194181 | None:intergenic | 35.0% |
| TCGATCTGTGAATGGTAATA+AGG | + | chr3_2:77194190-77194209 | Msa0426710:intron | 35.0% | |
| CCATGTATCATTGATGTCAT+CGG | - | chr3_2:77194348-77194367 | None:intergenic | 35.0% | |
| CGATGACATCAATGATACAT+GGG | + | chr3_2:77194346-77194365 | Msa0426710:CDS | 35.0% | |
| ATTGCCAACTTCCAACATAT+CGG | - | chr3_2:77194674-77194693 | None:intergenic | 35.0% | |
| GAAGTCATTGCTGTAAATCA+AGG | + | chr3_2:77194896-77194915 | Msa0426710:intron | 35.0% | |
| !! | GCGATAAATTTTGGGTCTTT+TGG | + | chr3_2:77195168-77195187 | Msa0426710:intron | 35.0% |
| TCCTTTATCAGGAAATCGTT+TGG | + | chr3_2:77195404-77195423 | Msa0426710:CDS | 35.0% | |
| ! | CTGGAATTCATGTTTCTGTA+AGG | + | chr3_2:77195499-77195518 | Msa0426710:CDS | 35.0% |
| ! | ATGTTTCTGTAAGGGATTTG+TGG | + | chr3_2:77195508-77195527 | Msa0426710:CDS | 35.0% |
| CTTATGCTGCAAAATAGTGA+AGG | - | chr3_2:77195685-77195704 | None:intergenic | 35.0% | |
| ! | CTTCACTATTTTGCAGCATA+AGG | + | chr3_2:77195683-77195702 | Msa0426710:intron | 35.0% |
| AAACATCATAAATCCATCCG+GGG | - | chr3_2:77196048-77196067 | None:intergenic | 35.0% | |
| CGAGAGAAAAGTTATCTTAC+GGG | + | chr3_2:77196734-77196753 | Msa0426710:intron | 35.0% | |
| GATTTATGGTATGGAATGCA+TGG | + | chr3_2:77196832-77196851 | Msa0426710:intron | 35.0% | |
| ATTTATGGGATGGAATGCAT+AGG | + | chr3_2:77196897-77196916 | Msa0426710:intron | 35.0% | |
| ATGCATAGGACAATATTTGC+TGG | + | chr3_2:77196911-77196930 | Msa0426710:intron | 35.0% | |
| GATATGATACTGCACAGTAT+CGG | - | chr3_2:77196944-77196963 | None:intergenic | 35.0% | |
| ATCGGAGAATATTACACGAG+AGG | + | chr3_2:77191045-77191064 | Msa0426710:five_prime_UTR | 40.0% | |
| ! | CTTGTTTCTCAATGACTTGC+CGG | - | chr3_2:77191330-77191349 | None:intergenic | 40.0% |
| ATCTTAGGAACTGTCTGGAA+TGG | - | chr3_2:77191360-77191379 | None:intergenic | 40.0% | |
| ATCGAATCTTAGGAACTGTC+TGG | - | chr3_2:77191365-77191384 | None:intergenic | 40.0% | |
| TCTTGCTGACACAAAAACAG+AGG | - | chr3_2:77191510-77191529 | None:intergenic | 40.0% | |
| ATAGAAACAAACCCCATCTG+AGG | - | chr3_2:77191650-77191669 | None:intergenic | 40.0% | |
| !! | ATGATTTGGTGTCGTGTAGA+TGG | + | chr3_2:77191790-77191809 | Msa0426710:intron | 40.0% |
| !! | CGTCAATATAGGTACTGATC+TGG | + | chr3_2:77192409-77192428 | Msa0426710:intron | 40.0% |
| TGTCTATCCCGACTTTCAAT+TGG | + | chr3_2:77192636-77192655 | Msa0426710:intron | 40.0% | |
| TCCTCATCCAATTGAAAGTC+GGG | - | chr3_2:77192646-77192665 | None:intergenic | 40.0% | |
| CAAAAAACACACCAGCACAT+CGG | - | chr3_2:77192808-77192827 | None:intergenic | 40.0% | |
| GATGGAAATGTCTTACGATC+AGG | - | chr3_2:77193020-77193039 | None:intergenic | 40.0% | |
| GATCGTAAGACATTTCCATC+AGG | + | chr3_2:77193020-77193039 | Msa0426710:intron | 40.0% | |
| CTTGGCATATATTCTGATGC+TGG | + | chr3_2:77193086-77193105 | Msa0426710:intron | 40.0% | |
| GACATGTAAAAGCCCTAAGT+AGG | - | chr3_2:77193195-77193214 | None:intergenic | 40.0% | |
| ! | AATCTGCATCACCATTTTCG+TGG | - | chr3_2:77193240-77193259 | None:intergenic | 40.0% |
| CAGATACTCTTTATGTGTCC+TGG | + | chr3_2:77193297-77193316 | Msa0426710:intron | 40.0% | |
| AGAACATCATATCCAAAGGC+TGG | - | chr3_2:77193488-77193507 | None:intergenic | 40.0% | |
| ! | CTTGGAACTTCACACTTTTG+CGG | + | chr3_2:77193657-77193676 | Msa0426710:intron | 40.0% |
| CATAATATCTATGGAGGCCT+GGG | - | chr3_2:77193686-77193705 | None:intergenic | 40.0% | |
| ACATAATATCTATGGAGGCC+TGG | - | chr3_2:77193687-77193706 | None:intergenic | 40.0% | |
| TAGAAGCAGCACAACTCAAA+AGG | + | chr3_2:77193730-77193749 | Msa0426710:intron | 40.0% | |
| CAGCACAACTCAAAAGGAAA+CGG | + | chr3_2:77193736-77193755 | Msa0426710:intron | 40.0% | |
| CATCTTAGTGACTTATCTCG+AGG | + | chr3_2:77193871-77193890 | Msa0426710:intron | 40.0% | |
| CCGATGACATCAATGATACA+TGG | + | chr3_2:77194345-77194364 | Msa0426710:CDS | 40.0% | |
| ACATCAATGATACATGGGCA+AGG | + | chr3_2:77194351-77194370 | Msa0426710:CDS | 40.0% | |
| CCATCTAAAAGTCAAAGTCC+AGG | - | chr3_2:77194384-77194403 | None:intergenic | 40.0% | |
| !! | CCTGGACTTTGACTTTTAGA+TGG | + | chr3_2:77194381-77194400 | Msa0426710:intron | 40.0% |
| TTGCTGATCTTAATGACCGA+TGG | + | chr3_2:77194526-77194545 | Msa0426710:CDS | 40.0% | |
| TGCTGATCTTAATGACCGAT+GGG | + | chr3_2:77194527-77194546 | Msa0426710:CDS | 40.0% | |
| TTGCCAACTTCCAACATATC+GGG | - | chr3_2:77194673-77194692 | None:intergenic | 40.0% | |
| GATATGTTGGAAGTTGGCAA+TGG | + | chr3_2:77194673-77194692 | Msa0426710:intron | 40.0% | |
| ACATCGCAACCAATCAAAAG+AGG | - | chr3_2:77194833-77194852 | None:intergenic | 40.0% | |
| CAACTTGAACTTTCCTTCCT+TGG | - | chr3_2:77195090-77195109 | None:intergenic | 40.0% | |
| !! | GTTCAAGTTGCTGGAATAGA+TGG | + | chr3_2:77195100-77195119 | Msa0426710:CDS | 40.0% |
| TGGAATAGATGGTTGTAGTC+AGG | + | chr3_2:77195111-77195130 | Msa0426710:CDS | 40.0% | |
| ! | TGCGTCTACGCGATAAATTT+TGG | + | chr3_2:77195159-77195178 | Msa0426710:intron | 40.0% |
| ! | GCGTCTACGCGATAAATTTT+GGG | + | chr3_2:77195160-77195179 | Msa0426710:intron | 40.0% |
| AATAAGTGTATGGCCAGTTG+TGG | - | chr3_2:77195250-77195269 | None:intergenic | 40.0% | |
| AGTTAGAAGCTAGTCCAAAC+TGG | + | chr3_2:77195295-77195314 | Msa0426710:intron | 40.0% | |
| ACTACGAGCTTGAAGTATGT+TGG | + | chr3_2:77195344-77195363 | Msa0426710:intron | 40.0% | |
| ATTTATTTACAGGTCTGGGC+AGG | + | chr3_2:77195381-77195400 | Msa0426710:intron | 40.0% | |
| GCCAAACGATTTCCTGATAA+AGG | - | chr3_2:77195408-77195427 | None:intergenic | 40.0% | |
| TTGCGACTATAACAGCATCA+TGG | + | chr3_2:77195457-77195476 | Msa0426710:CDS | 40.0% | |
| TGCGACTATAACAGCATCAT+GGG | + | chr3_2:77195458-77195477 | Msa0426710:CDS | 40.0% | |
| ACAAATCGACCAAAACCCAT+AGG | - | chr3_2:77195827-77195846 | None:intergenic | 40.0% | |
| AAATCCAAAATGAGCATGGC+AGG | + | chr3_2:77195847-77195866 | Msa0426710:intron | 40.0% | |
| TAGATCGGACAAATTGAGCA+GGG | - | chr3_2:77196678-77196697 | None:intergenic | 40.0% | |
| ATAGATCGGACAAATTGAGC+AGG | - | chr3_2:77196679-77196698 | None:intergenic | 40.0% | |
| GGCGTCTTTCAGCTTAGTAA+TGG | + | chr3_2:77191611-77191630 | Msa0426710:CDS | 45.0% | |
| !! | TTTGGCTCTTACACCTCAGA+TGG | + | chr3_2:77191634-77191653 | Msa0426710:CDS | 45.0% |
| ! | TTGGCTCTTACACCTCAGAT+GGG | + | chr3_2:77191635-77191654 | Msa0426710:CDS | 45.0% |
| ! | TGCACTGGTATCAACTGGAT+TGG | + | chr3_2:77192367-77192386 | Msa0426710:intron | 45.0% |
| !! | ATCAACTGGATTGGCCAAGT+TGG | + | chr3_2:77192376-77192395 | Msa0426710:intron | 45.0% |
| !! | TCAACTGGATTGGCCAAGTT+GGG | + | chr3_2:77192377-77192396 | Msa0426710:intron | 45.0% |
| GACGTACACATAACCCAACT+TGG | - | chr3_2:77192393-77192412 | None:intergenic | 45.0% | |
| TACAATGTGCAGACGATTGC+TGG | + | chr3_2:77192499-77192518 | Msa0426710:intron | 45.0% | |
| TCCCGACTTTCAATTGGATG+AGG | + | chr3_2:77192642-77192661 | Msa0426710:intron | 45.0% | |
| ACTTTATGCATCCGATGTGC+TGG | + | chr3_2:77192794-77192813 | Msa0426710:intron | 45.0% | |
| GCAAGTGCTTTGATTCCTGA+TGG | - | chr3_2:77193038-77193057 | None:intergenic | 45.0% | |
| ! | CACTTGCCGATTATGTCCAT+GGG | + | chr3_2:77193051-77193070 | Msa0426710:intron | 45.0% |
| TCCCTTCCCATGGACATAAT+CGG | - | chr3_2:77193060-77193079 | None:intergenic | 45.0% | |
| TTTACATGTCAAGTCCGACC+AGG | + | chr3_2:77193205-77193224 | Msa0426710:intron | 45.0% | |
| CGTGGAAAATTGATCCTGGT+CGG | - | chr3_2:77193222-77193241 | None:intergenic | 45.0% | |
| ATGTGTCCTGGACTTTGTAG+AGG | + | chr3_2:77193309-77193328 | Msa0426710:intron | 45.0% | |
| TTAGGACCTCTACAAAGTCC+AGG | - | chr3_2:77193318-77193337 | None:intergenic | 45.0% | |
| !! | ACTTATCTCGAGGCGCTTTT+CGG | + | chr3_2:77193881-77193900 | Msa0426710:intron | 45.0% |
| TCGGCATCCCTCCAAAAAAA+CGG | + | chr3_2:77194029-77194048 | Msa0426710:intron | 45.0% | |
| ATCACGCATAGGTGGATATC+TGG | - | chr3_2:77194137-77194156 | None:intergenic | 45.0% | |
| TGTTGACGATCCTGCTCTAT+GGG | + | chr3_2:77194292-77194311 | Msa0426710:CDS | 45.0% | |
| !! | CAGGCACAGTTGGTAATAGT+TGG | + | chr3_2:77194315-77194334 | Msa0426710:CDS | 45.0% |
| CATGGGCAAGGTTAAAATCC+TGG | + | chr3_2:77194363-77194382 | Msa0426710:intron | 45.0% | |
| TGCCAACTTCCAACATATCG+GGG | - | chr3_2:77194672-77194691 | None:intergenic | 45.0% | |
| ATGTTGGAAGTTGGCAATGG+TGG | + | chr3_2:77194676-77194695 | Msa0426710:intron | 45.0% | |
| ! | CAGCATATGGGCTTTAGCAA+AGG | + | chr3_2:77194729-77194748 | Msa0426710:intron | 45.0% |
| GATTGTGAACTTGTGTGTGC+AGG | + | chr3_2:77194805-77194824 | Msa0426710:intron | 45.0% | |
| !! | GGAAGGAAAGTTCAAGTTGC+TGG | + | chr3_2:77195091-77195110 | Msa0426710:CDS | 45.0% |
| AGTTGGGCAAAGATCCAGTT+TGG | - | chr3_2:77195312-77195331 | None:intergenic | 45.0% | |
| ATCGTTTGGCTGTTGCTCTT+TGG | + | chr3_2:77195418-77195437 | Msa0426710:CDS | 45.0% | |
| TTCTGTAAGGGATTTGTGGC+AGG | + | chr3_2:77195512-77195531 | Msa0426710:CDS | 45.0% | |
| GCAGAGTAAGATGCTGTAGA+TGG | - | chr3_2:77195783-77195802 | None:intergenic | 45.0% | |
| AGATCTACTTCACCCACCTA+TGG | + | chr3_2:77195808-77195827 | Msa0426710:intron | 45.0% | |
| GATCTACTTCACCCACCTAT+GGG | + | chr3_2:77195809-77195828 | Msa0426710:intron | 45.0% | |
| ATCGACCAAAACCCATAGGT+GGG | - | chr3_2:77195823-77195842 | None:intergenic | 45.0% | |
| AATCGACCAAAACCCATAGG+TGG | - | chr3_2:77195824-77195843 | None:intergenic | 45.0% | |
| ! | ACATCCTGCCATGCTCATTT+TGG | - | chr3_2:77195854-77195873 | None:intergenic | 45.0% |
| TTATGTCCAAAATGTGGCCC+CGG | + | chr3_2:77196028-77196047 | Msa0426710:intron | 45.0% | |
| TCTCGCGTTTCTGAACACAT+GGG | - | chr3_2:77196334-77196353 | None:intergenic | 45.0% | |
| ! | AGGCGTTACTTTGTCGTTGA+TGG | - | chr3_2:77196573-77196592 | None:intergenic | 45.0% |
| TCAACGACAAAGTAACGCCT+TGG | + | chr3_2:77196573-77196592 | Msa0426710:intron | 45.0% | |
| CAACGACAAAGTAACGCCTT+GGG | + | chr3_2:77196574-77196593 | Msa0426710:intron | 45.0% | |
| TGGCTCTTACACCTCAGATG+GGG | + | chr3_2:77191636-77191655 | Msa0426710:CDS | 50.0% | |
| TGTCGTGTAGATGGAACAGC+TGG | + | chr3_2:77191799-77191818 | Msa0426710:intron | 50.0% | |
| AACAGTGTCTAGCGCGTAGA+TGG | + | chr3_2:77192092-77192111 | Msa0426710:intron | 50.0% | |
| TATCCTTGCAGCTGATGCAC+TGG | + | chr3_2:77192352-77192371 | Msa0426710:intron | 50.0% | |
| ATACCAGTGCATCAGCTGCA+AGG | - | chr3_2:77192358-77192377 | None:intergenic | 50.0% | |
| ! | GCTGATGCACTGGTATCAAC+TGG | + | chr3_2:77192362-77192381 | Msa0426710:intron | 50.0% |
| ! | TTTGGAAGTGTAGGGTGACC+TGG | + | chr3_2:77192992-77193011 | Msa0426710:intron | 50.0% |
| ATGTCTTACGATCAGGGACC+AGG | - | chr3_2:77193013-77193032 | None:intergenic | 50.0% | |
| ! | GCACTTGCCGATTATGTCCA+TGG | + | chr3_2:77193050-77193069 | Msa0426710:intron | 50.0% |
| ! | TGCCGATTATGTCCATGGGA+AGG | + | chr3_2:77193055-77193074 | Msa0426710:intron | 50.0% |
| GCCGATTATGTCCATGGGAA+GGG | + | chr3_2:77193056-77193075 | Msa0426710:intron | 50.0% | |
| TGCATTTCACAGGTTACGCC+AGG | + | chr3_2:77193375-77193394 | Msa0426710:intron | 50.0% | |
| !! | TCATTGAGGGCATCACGCAT+AGG | - | chr3_2:77194148-77194167 | None:intergenic | 50.0% |
| CGTGATGCCCTCAATGAAAC+TGG | + | chr3_2:77194151-77194170 | Msa0426710:intron | 50.0% | |
| ! | GTGTTGACGATCCTGCTCTA+TGG | + | chr3_2:77194291-77194310 | Msa0426710:CDS | 50.0% |
| TTCGACAGACCCCGATATGT+TGG | + | chr3_2:77194660-77194679 | Msa0426710:intron | 50.0% | |
| GACCCCGATATGTTGGAAGT+TGG | + | chr3_2:77194667-77194686 | Msa0426710:intron | 50.0% | |
| CAATGGTGGCATGACTTACC+AGG | + | chr3_2:77194690-77194709 | Msa0426710:intron | 50.0% | |
| TGAAGTGAGCACGGTATTCC+TGG | - | chr3_2:77194711-77194730 | None:intergenic | 50.0% | |
| ACCGTGCTCACTTCAGCATA+TGG | + | chr3_2:77194716-77194735 | Msa0426710:intron | 50.0% | |
| CCCATATGCTGAAGTGAGCA+CGG | - | chr3_2:77194720-77194739 | None:intergenic | 50.0% | |
| CCGTGCTCACTTCAGCATAT+GGG | + | chr3_2:77194717-77194736 | Msa0426710:intron | 50.0% | |
| ! | GTGCAGGCTCCTCTTTTGAT+TGG | + | chr3_2:77194821-77194840 | Msa0426710:intron | 50.0% |
| TGTCTCTCTGCAGACTCACT+TGG | + | chr3_2:77195061-77195080 | Msa0426710:intron | 50.0% | |
| ACTCACTTGGAGTCCAAGGA+AGG | + | chr3_2:77195074-77195093 | Msa0426710:CDS | 50.0% | |
| !! | ACAGCATCATGGGAAGCACT+TGG | + | chr3_2:77195468-77195487 | Msa0426710:CDS | 50.0% |
| !! | CAGCATCATGGGAAGCACTT+GGG | + | chr3_2:77195469-77195488 | Msa0426710:CDS | 50.0% |
| ! | GAAGCACTTGGGCTTGAATC+TGG | + | chr3_2:77195480-77195499 | Msa0426710:CDS | 50.0% |
| ! | CTTCACCCACCTATGGGTTT+TGG | + | chr3_2:77195815-77195834 | Msa0426710:intron | 50.0% |
| CTCTCGCGTTTCTGAACACA+TGG | - | chr3_2:77196335-77196354 | None:intergenic | 50.0% | |
| GACAGTCTTCGATACTGTGC+TGG | + | chr3_2:77196855-77196874 | Msa0426710:intron | 50.0% | |
| GTGCAATGCAACACGGTCAC+AGG | - | chr3_2:77191394-77191413 | None:intergenic | 55.0% | |
| CAAGCTTGAGTCCCTTCCCA+TGG | - | chr3_2:77193070-77193089 | None:intergenic | 55.0% | |
| CATGGGAAGGGACTCAAGCT+TGG | + | chr3_2:77193068-77193087 | Msa0426710:intron | 55.0% | |
| ! | TCACACTTTTGCGGTGACCC+AGG | + | chr3_2:77193666-77193685 | Msa0426710:intron | 55.0% |
| !! | TTGAGGGCATCACGCATAGG+TGG | - | chr3_2:77194145-77194164 | None:intergenic | 55.0% |
| ACCATTCCATCCTCCAGGAC+CGG | - | chr3_2:77194562-77194581 | None:intergenic | 55.0% | |
| GGTGTACCATTCCATCCTCC+AGG | - | chr3_2:77194567-77194586 | None:intergenic | 55.0% | |
| GCAGACTCACTTGGAGTCCA+AGG | + | chr3_2:77195070-77195089 | Msa0426710:intron | 55.0% | |
| GTCTGGGCAGGTCCTTTATC+AGG | + | chr3_2:77195393-77195412 | Msa0426710:CDS | 55.0% | |
| CTGCTTAGAGCAGTTTCGCG+TGG | - | chr3_2:77195551-77195570 | None:intergenic | 55.0% | |
| ! | ATCCATCCGGGGCCACATTT+TGG | - | chr3_2:77196037-77196056 | None:intergenic | 55.0% |
| GACGATCCTGCTCTATGGGC+AGG | + | chr3_2:77194296-77194315 | Msa0426710:CDS | 60.0% | |
| ACTGTGCCTGCCCATAGAGC+AGG | - | chr3_2:77194305-77194324 | None:intergenic | 60.0% | |
| GCTCTATGGGCAGGCACAGT+TGG | + | chr3_2:77194305-77194324 | Msa0426710:CDS | 60.0% | |
| !! | GACCGATGGGCTGCATATGC+CGG | + | chr3_2:77194540-77194559 | Msa0426710:CDS | 60.0% |
| GACCGGCATATGCAGCCCAT+CGG | - | chr3_2:77194545-77194564 | None:intergenic | 60.0% | |
| CATATGCCGGTCCTGGAGGA+TGG | + | chr3_2:77194553-77194572 | Msa0426710:CDS | 60.0% | |
| GTCCAAAATGTGGCCCCGGA+TGG | + | chr3_2:77196032-77196051 | Msa0426710:intron | 60.0% | |
| TGGGCTGCATATGCCGGTCC+TGG | + | chr3_2:77194546-77194565 | Msa0426710:CDS | 65.0% | |
| GCTGCATATGCCGGTCCTGG+AGG | + | chr3_2:77194549-77194568 | Msa0426710:CDS | 65.0% | |
| GCCGGTCCTGGAGGATGGAA+TGG | + | chr3_2:77194558-77194577 | Msa0426710:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 77191025 | 77197005 | 77191025 | ID=Msa0426710;Name=Msa0426710 |
| chr3_2 | mRNA | 77191025 | 77197005 | 77191025 | ID=Msa0426710-mRNA-1;Parent=Msa0426710;Name=Msa0426710-mRNA-1;_AED=0.45;_eAED=0.45;_QI=233|0.44|0.6|0.8|0.88|0.8|10|0|192 |
| chr3_2 | exon | 77191025 | 77191136 | 77191025 | ID=Msa0426710-mRNA-1:exon:20116;Parent=Msa0426710-mRNA-1 |
| chr3_2 | exon | 77191331 | 77191657 | 77191331 | ID=Msa0426710-mRNA-1:exon:20117;Parent=Msa0426710-mRNA-1 |
| chr3_2 | exon | 77191760 | 77191765 | 77191760 | ID=Msa0426710-mRNA-1:exon:20118;Parent=Msa0426710-mRNA-1 |
| chr3_2 | exon | 77194289 | 77194372 | 77194289 | ID=Msa0426710-mRNA-1:exon:20119;Parent=Msa0426710-mRNA-1 |
| chr3_2 | exon | 77194515 | 77194579 | 77194515 | ID=Msa0426710-mRNA-1:exon:20120;Parent=Msa0426710-mRNA-1 |
| chr3_2 | exon | 77195074 | 77195132 | 77195074 | ID=Msa0426710-mRNA-1:exon:20121;Parent=Msa0426710-mRNA-1 |
| chr3_2 | exon | 77195393 | 77195533 | 77195393 | ID=Msa0426710-mRNA-1:exon:20122;Parent=Msa0426710-mRNA-1 |
| chr3_2 | exon | 77195699 | 77195704 | 77195699 | ID=Msa0426710-mRNA-1:exon:20123;Parent=Msa0426710-mRNA-1 |
| chr3_2 | exon | 77196088 | 77196093 | 77196088 | ID=Msa0426710-mRNA-1:exon:20124;Parent=Msa0426710-mRNA-1 |
| chr3_2 | exon | 77197000 | 77197005 | 77197000 | ID=Msa0426710-mRNA-1:exon:20125;Parent=Msa0426710-mRNA-1 |
| chr3_2 | five_prime_UTR | 77191025 | 77191136 | 77191025 | ID=Msa0426710-mRNA-1:five_prime_utr;Parent=Msa0426710-mRNA-1 |
| chr3_2 | five_prime_UTR | 77191331 | 77191451 | 77191331 | ID=Msa0426710-mRNA-1:five_prime_utr;Parent=Msa0426710-mRNA-1 |
| chr3_2 | CDS | 77191452 | 77191657 | 77191452 | ID=Msa0426710-mRNA-1:cds;Parent=Msa0426710-mRNA-1 |
| chr3_2 | CDS | 77191760 | 77191765 | 77191760 | ID=Msa0426710-mRNA-1:cds;Parent=Msa0426710-mRNA-1 |
| chr3_2 | CDS | 77194289 | 77194372 | 77194289 | ID=Msa0426710-mRNA-1:cds;Parent=Msa0426710-mRNA-1 |
| chr3_2 | CDS | 77194515 | 77194579 | 77194515 | ID=Msa0426710-mRNA-1:cds;Parent=Msa0426710-mRNA-1 |
| chr3_2 | CDS | 77195074 | 77195132 | 77195074 | ID=Msa0426710-mRNA-1:cds;Parent=Msa0426710-mRNA-1 |
| chr3_2 | CDS | 77195393 | 77195533 | 77195393 | ID=Msa0426710-mRNA-1:cds;Parent=Msa0426710-mRNA-1 |
| chr3_2 | CDS | 77195699 | 77195704 | 77195699 | ID=Msa0426710-mRNA-1:cds;Parent=Msa0426710-mRNA-1 |
| chr3_2 | CDS | 77196088 | 77196093 | 77196088 | ID=Msa0426710-mRNA-1:cds;Parent=Msa0426710-mRNA-1 |
| chr3_2 | CDS | 77197000 | 77197005 | 77197000 | ID=Msa0426710-mRNA-1:cds;Parent=Msa0426710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
