AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1341950


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341950 MtrunA17_Chr4g0006741 96.367 991 8 1 1 963 168 1158 0.0 1962
Msa1341950 MtrunA17_Chr6g0480511 69.136 81 21 1 857 937 1 77 1.18e-29 112
Msa1341950 MtrunA17_Chr6g0480131 80.488 41 8 0 827 867 78 118 8.59e-14 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341950 AT3G17740.1 56.431 1003 383 14 1 962 159 1148 0.0 1072
Msa1341950 AT3G17712.2 53.404 661 263 14 1 647 190 819 0.0 622
Msa1341950 AT3G17712.3 54.139 604 251 12 1 590 159 750 0.0 583
Msa1341950 AT3G17712.1 51.828 629 252 12 1 590 159 775 0.0 569

Find 227 sgRNAs with CRISPR-Local

Find 519 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCACCTCTTCTATATTTA+TGG 0.091238 tig0004987:-11169 Msa1341950:CDS
AGTTGCCACTGCTTTATTTC+AGG 0.187243 tig0004987:-14189 Msa1341950:CDS
AAGCTTAATGAGTCATTTAT+TGG 0.188488 tig0004987:-7778 Msa1341950:three_prime_UTR
AATCAAATGTGTATATCTTT+TGG 0.201919 tig0004987:-7805 Msa1341950:three_prime_UTR
AATATATAGAAGTTCATTAA+AGG 0.246122 tig0004987:+7751 Msa1341950:intergenic
CATCATCACTTGAAGAATCT+TGG 0.255261 tig0004987:-15167 Msa1341950:CDS
TGAAAAGAAAATTAGCATTC+TGG 0.276086 tig0004987:-14998 Msa1341950:CDS
AAAAGAGGCTCGACTATATT+TGG 0.284322 tig0004987:-13418 Msa1341950:CDS
ATGTCTGGGCGACATGTTAA+AGG 0.285959 tig0004987:-15444 Msa1341950:CDS
TTCTAAAGCCATATACTTTC+CGG 0.294879 tig0004987:+15326 Msa1341950:intergenic
TGATGCGGGCATTGAAGTTT+TGG 0.295063 tig0004987:-10880 Msa1341950:CDS
GACATATTCAAGGGATTATA+CGG 0.303008 tig0004987:+15462 Msa1341950:intergenic
AATCAGGTCTGATGAAAGTT+TGG 0.310085 tig0004987:-9762 Msa1341950:CDS
TCCCAATTCATTGACTTCTA+TGG 0.311831 tig0004987:-13393 Msa1341950:CDS
TTGTTATTCTATGTCAAAAC+TGG 0.321666 tig0004987:+7634 Msa1341950:intergenic
ATTGAAGCTTTGTCTGCTTC+AGG 0.321667 tig0004987:-14755 Msa1341950:CDS
TTGTTTGAGGAGCTAACTTC+TGG 0.335825 tig0004987:-10906 Msa1341950:CDS
AAACTGAACTCTGTTCTTAC+TGG 0.335846 tig0004987:-8524 Msa1341950:CDS
TATAATCCCTTGAATATGTC+TGG 0.349363 tig0004987:-15459 Msa1341950:CDS
GATATACACATTTGATTTGT+GGG 0.352839 tig0004987:+7811 Msa1341950:intergenic
GCATTCCTGCAACCTTATCT+TGG 0.357772 tig0004987:+15052 Msa1341950:intergenic
AATGATGACAGGGTAAAATA+TGG 0.358287 tig0004987:-7907 Msa1341950:three_prime_UTR
TGCAAGAAAGGTGTTTGATA+TGG 0.360767 tig0004987:-11429 Msa1341950:CDS
ACATCAGTTCGCATCATATC+AGG 0.363869 tig0004987:+8370 Msa1341950:intergenic
AGTTCTTGCTGAACAATTGC+AGG 0.366857 tig0004987:+14272 Msa1341950:intergenic
ATACTGGTCCGGAAAGTATA+TGG 0.373451 tig0004987:-15334 Msa1341950:CDS
AACTGACATTGATTTGGTTA+TGG 0.374531 tig0004987:-13898 Msa1341950:CDS
CACCATAGAAGTCAATGAAT+TGG 0.376393 tig0004987:+13391 Msa1341950:intergenic
GCACGAAGAGAGGCTGATTA+TGG 0.379965 tig0004987:-11464 Msa1341950:CDS
TGTGTCGCCCATCCGGAAGC+TGG 0.380256 tig0004987:-7866 Msa1341950:three_prime_UTR
TGAGAACAGTATTATCATCT+TGG 0.381863 tig0004987:-10980 Msa1341950:CDS
AAATGAAACTGACATTGATT+TGG 0.382298 tig0004987:-13904 Msa1341950:CDS
ACATTTGATTTGTGGGGTCT+AGG 0.397563 tig0004987:+7818 Msa1341950:intergenic
TGATATTAATGCTGGGGATG+GGG 0.400245 tig0004987:-13796 Msa1341950:CDS
GTTGTATGAGGTGACAATTT+TGG 0.400437 tig0004987:+15267 Msa1341950:intergenic
TGAAGTCTGCTGGGCGATAC+TGG 0.400470 tig0004987:-15350 Msa1341950:CDS
AGTTTGGGAATCCGTTTCTC+AGG 0.400962 tig0004987:-9746 Msa1341950:CDS
ACCCGCATGATGAAATAGTT+TGG 0.410461 tig0004987:-15092 Msa1341950:CDS
AGATGGCGATATTGATGCTT+TGG 0.414986 tig0004987:-15382 Msa1341950:CDS
TGTCAGTTTGTTGAACTCCC+TGG 0.415865 tig0004987:+15122 Msa1341950:intergenic
AACTTCTCTAACATAGAATC+TGG 0.417243 tig0004987:+12611 Msa1341950:intergenic
ATGTTCTGCTTCATTGTTTG+AGG 0.421531 tig0004987:-10919 Msa1341950:CDS
GATATTAATGCTGGGGATGG+GGG 0.421772 tig0004987:-13795 Msa1341950:CDS
ATCATCACTTGAAGAATCTT+GGG 0.421872 tig0004987:-15166 Msa1341950:CDS
ATATTGTCTTGCTTAGGAAA+TGG 0.422114 tig0004987:-11080 Msa1341950:CDS
TACTGTGGCGTTGCTACATT+GGG 0.427366 tig0004987:-8806 Msa1341950:CDS
ATGTTAAAGGTTTGTATTGG+TGG 0.430835 tig0004987:-15431 Msa1341950:CDS
TTTCAACAAACAGTCCTACT+TGG 0.431735 tig0004987:-12664 Msa1341950:CDS
CCGACTTATTGATCTGCTCT+TGG 0.433348 tig0004987:-8393 Msa1341950:three_prime_UTR
TGCTGAACAATTGCAGGATC+CGG 0.434392 tig0004987:+14278 Msa1341950:intergenic
ATGCCTATTCGAAGGAAGTT+AGG 0.435294 tig0004987:-13702 Msa1341950:intron
TTGATATTAATGCTGGGGAT+GGG 0.436562 tig0004987:-13797 Msa1341950:CDS
GAGGAATTTCTCCAAGTTCA+AGG 0.436742 tig0004987:-14810 Msa1341950:CDS
AACATATTGTGTCGCCCATC+CGG 0.441908 tig0004987:-7873 Msa1341950:three_prime_UTR
GAGTTCCAAGATAAGGTTGC+AGG 0.444561 tig0004987:-15057 Msa1341950:CDS
TGGCACCGTAACCCAGCTTC+CGG 0.445102 tig0004987:+7854 Msa1341950:intergenic
AGATATACACATTTGATTTG+TGG 0.445128 tig0004987:+7810 Msa1341950:intergenic
TTCTTCTGACCATTTGATCC+AGG 0.447092 tig0004987:+13752 Msa1341950:intergenic
GGTTACGCCATGTCGAGCTT+TGG 0.447534 tig0004987:-12366 Msa1341950:CDS
TGAGAATTTGCTAAAGCTGC+TGG 0.447644 tig0004987:-13823 Msa1341950:CDS
ATCAGGTCTGATGAAAGTTT+GGG 0.449772 tig0004987:-9761 Msa1341950:CDS
GACATGTTAAAGGTTTGTAT+TGG 0.456197 tig0004987:-15434 Msa1341950:CDS
CCCATCCGGAAGCTGGGTTA+CGG 0.457862 tig0004987:-7859 Msa1341950:three_prime_UTR
CAATATTGATCTTGCAAGAA+AGG 0.458569 tig0004987:-11441 Msa1341950:CDS
CAGAGGCATCAGAAGCAATC+AGG 0.458800 tig0004987:-9778 Msa1341950:CDS
CTACCTAACTTCCTTCGAAT+AGG 0.464372 tig0004987:+13699 Msa1341950:intergenic
TGCAGATTTGAGTGGCAGGC+TGG 0.464824 tig0004987:-14221 Msa1341950:CDS
CTGGGAATTGATATTAATGC+TGG 0.465869 tig0004987:-13804 Msa1341950:CDS
TTAAAAGGTGTAGTGGAAGT+TGG 0.465903 tig0004987:-9691 Msa1341950:CDS
GACAGAGAACACACTTAGCT+TGG 0.468388 tig0004987:-12642 Msa1341950:CDS
ACACTTTGACCTGGATCAAA+TGG 0.468618 tig0004987:-13761 Msa1341950:CDS
CTTCAGGCAGCAAGCACTCT+AGG 0.468679 tig0004987:-14739 Msa1341950:CDS
GGTGCTAGAGTCGGAGAAGA+AGG 0.469058 tig0004987:-14077 Msa1341950:CDS
ACCATAGAAGTCAATGAATT+GGG 0.472745 tig0004987:+13392 Msa1341950:intergenic
AAATCTAAAGTGAAACTAGT+AGG 0.473342 tig0004987:+12548 Msa1341950:intergenic
TTTATACCTTTATCAGATGT+TGG 0.475182 tig0004987:-15234 Msa1341950:CDS
TCTTTGCAGATTTGAGTGGC+AGG 0.476187 tig0004987:-14225 Msa1341950:CDS
GAAAATTAGCATTCTGGAGA+AGG 0.477612 tig0004987:-14992 Msa1341950:CDS
AGTTCAAGGTTTCCATGGTT+AGG 0.478362 tig0004987:-14796 Msa1341950:CDS
GTCCACATGGTTGGAGAAAG+AGG 0.479968 tig0004987:-14042 Msa1341950:CDS
TATTAGACGTTGTGTGGAAG+TGG 0.480847 tig0004987:+9668 Msa1341950:intergenic
CTCCAAGTTCAAGGTTTCCA+TGG 0.483168 tig0004987:-14801 Msa1341950:CDS
AAATTCTCAGTATCATCTTC+AGG 0.485844 tig0004987:+13837 Msa1341950:intergenic
TTTCACCCTGAACACAAAAG+AGG 0.486554 tig0004987:-13433 Msa1341950:CDS
AAAATTCAAGTTGATAGCTA+TGG 0.486757 tig0004987:+9827 Msa1341950:intergenic
ATACATATATTGTCTTGCTT+AGG 0.487166 tig0004987:-11086 Msa1341950:CDS
TAGCTGGAGGCCCTGAGAAA+CGG 0.488750 tig0004987:+9735 Msa1341950:intergenic
GAAAACCATCTGTAGTTGTC+TGG 0.489074 tig0004987:-8932 Msa1341950:CDS
ACTTGTAACAGCGTTCATCT+AGG 0.489334 tig0004987:+9632 Msa1341950:intergenic
GTGCTATCCATGCTTGCCCC+TGG 0.490132 tig0004987:-8731 Msa1341950:intron
TCTGCTGGGCGATACTGGTC+CGG 0.492360 tig0004987:-15345 Msa1341950:CDS
CAGCCATGTGAATATCTGAT+AGG 0.495331 tig0004987:-7956 Msa1341950:three_prime_UTR
CTAACTTCTGGATGTGATGC+GGG 0.496122 tig0004987:-10894 Msa1341950:CDS
ATGAAAATGAAGGCGGAGGT+TGG 0.497135 tig0004987:-13980 Msa1341950:CDS
CATGCAGAATGGATATTGCC+CGG 0.498884 tig0004987:-15491 None:intergenic
AAATGACCAATCTGTCGCTC+TGG 0.499183 tig0004987:-10943 Msa1341950:CDS
GGGATTATACGGTTTGTGCC+GGG 0.499324 tig0004987:+15473 Msa1341950:intergenic
ACCGTAACCCAGCTTCCGGA+TGG 0.501985 tig0004987:+7858 Msa1341950:intergenic
CTCTGCTCTGTGAGTAGCAA+AGG 0.502309 tig0004987:+14137 Msa1341950:intergenic
AACCATGGAAACCTTGAACT+TGG 0.502602 tig0004987:+14799 Msa1341950:intergenic
GATGATAAAATGAAGTCTGC+TGG 0.504271 tig0004987:-15360 Msa1341950:CDS
AATGAAGGCGGAGGTTGGTC+TGG 0.504419 tig0004987:-13975 Msa1341950:CDS
AACATACCAGAGCGACAGAT+TGG 0.504775 tig0004987:+10937 Msa1341950:intergenic
GTATTATCATCTTGGTTTCG+TGG 0.505889 tig0004987:-10972 Msa1341950:CDS
AGGGATTATACGGTTTGTGC+CGG 0.507851 tig0004987:+15472 Msa1341950:intergenic
GTCTAAAGATAAGGAGGGTA+CGG 0.509087 tig0004987:-13937 Msa1341950:CDS
AAGGTCATGACTCTTGCAAA+AGG 0.510428 tig0004987:+8429 Msa1341950:intergenic
GATGTACCAACATCTGATAA+AGG 0.510740 tig0004987:+15228 Msa1341950:intergenic
AAATGAATTCTTCTAACCGT+GGG 0.512118 tig0004987:-12388 Msa1341950:CDS
GGGCTCTCGGTTGGTCCACA+TGG 0.512719 tig0004987:-14055 Msa1341950:CDS
TAAATATAGAAGAGGTGCAT+TGG 0.516208 tig0004987:+11172 Msa1341950:intergenic
AGAACCTTTGTCTAAAGATA+AGG 0.517317 tig0004987:-13946 Msa1341950:CDS
TCAGATGTTGGTACATCTCA+AGG 0.520098 tig0004987:-15222 Msa1341950:CDS
GTCCTCACCAGGGGCAAGCA+TGG 0.521108 tig0004987:+8724 Msa1341950:intergenic
AGGCAGCAAGCACTCTAGGC+AGG 0.522323 tig0004987:-14735 Msa1341950:intron
CAATTCATTGACTTCTATGG+TGG 0.522961 tig0004987:-13390 Msa1341950:CDS
CTCCTCTTTCTCCAACCATG+TGG 0.525797 tig0004987:+14040 Msa1341950:intergenic
GAATCCGTGGATTATTTGAA+AGG 0.525915 tig0004987:-8863 Msa1341950:CDS
TGGAGAAAGAGGAGGAAACT+AGG 0.527396 tig0004987:-14031 Msa1341950:CDS
ATATTTATGGTATGCTGAAG+TGG 0.527552 tig0004987:-11156 Msa1341950:CDS
TCAAGCTGATGATTCTTCAC+CGG 0.528047 tig0004987:-14297 Msa1341950:CDS
CATCATATCAGCATTCCTCA+TGG 0.528935 tig0004987:+12511 Msa1341950:intergenic
TGGAATCAAAGTGGTTCACT+TGG 0.529079 tig0004987:-15411 Msa1341950:CDS
AACTCATCTTGTGTTGTATG+AGG 0.530621 tig0004987:+15255 Msa1341950:intergenic
ACCAAACTATTTCATCATGC+GGG 0.535900 tig0004987:+15091 Msa1341950:intergenic
GAGAATTTGCTAAAGCTGCT+GGG 0.536239 tig0004987:-13822 Msa1341950:CDS
TTTAAAAGTTCTGGACTGAA+GGG 0.539764 tig0004987:+9709 Msa1341950:intergenic
GTACTGTGGCGTTGCTACAT+TGG 0.539841 tig0004987:-8807 Msa1341950:CDS
GGAATCAAAGTGGTTCACTT+GGG 0.541162 tig0004987:-15410 Msa1341950:CDS
GAGTGCTTCACTAGTAGAAG+AGG 0.542272 tig0004987:+13518 Msa1341950:intergenic
GTGTCGCCCATCCGGAAGCT+GGG 0.542652 tig0004987:-7865 Msa1341950:three_prime_UTR
GTCGGAGAAGAAGGGGCTCT+CGG 0.543567 tig0004987:-14068 Msa1341950:CDS
ATGTGTGTACCAGGTCAAAA+CGG 0.545599 tig0004987:-8568 Msa1341950:intron
GTCTAGGTTAGCGCACAGAT+TGG 0.545761 tig0004987:+7834 Msa1341950:intergenic
GAGAAGAAGGGGCTCTCGGT+TGG 0.545878 tig0004987:-14064 Msa1341950:CDS
CTGGACTGAAGGGATATAGC+TGG 0.546217 tig0004987:+9719 Msa1341950:intergenic
AAGGCGGAGGTTGGTCTGGT+TGG 0.548589 tig0004987:-13971 Msa1341950:CDS
CCCTCCTTATCTTTAGACAA+AGG 0.550303 tig0004987:+13942 Msa1341950:intergenic
GCAATTTATTAGACGTTGTG+TGG 0.551393 tig0004987:+9662 Msa1341950:intergenic
TGACATTGATTTGGTTATGG+AGG 0.551910 tig0004987:-13895 Msa1341950:CDS
CAAATAATCCACGGATTCTG+TGG 0.552387 tig0004987:+8868 Msa1341950:intergenic
TGCAACCTTATCTTGGAACT+CGG 0.552722 tig0004987:+15059 Msa1341950:intergenic
AATCCGTGGATTATTTGAAA+GGG 0.552807 tig0004987:-8862 Msa1341950:CDS
ATGTCGCCCAGACATATTCA+AGG 0.553525 tig0004987:+15452 Msa1341950:intergenic
TCTCGGTTGGTCCACATGGT+TGG 0.553706 tig0004987:-14051 Msa1341950:CDS
GTGTGCTATGAAATGATGAC+AGG 0.556739 tig0004987:-7918 Msa1341950:three_prime_UTR
ATCTGATAGGAGCAGAGTGG+TGG 0.558214 tig0004987:-7943 Msa1341950:three_prime_UTR
AACCAAACTATTTCATCATG+CGG 0.561510 tig0004987:+15090 Msa1341950:intergenic
TCAGTCTTTGCAGATTTGAG+TGG 0.565941 tig0004987:-14229 Msa1341950:CDS
CTGATATGATGAAATTCGTA+CGG 0.566214 tig0004987:-12499 Msa1341950:CDS
GCAGGAATGCAACGGCAGAA+AGG 0.566264 tig0004987:-15039 Msa1341950:CDS
GTGCTAGAGTCGGAGAAGAA+GGG 0.568609 tig0004987:-14076 Msa1341950:CDS
ATTGATATTAATGCTGGGGA+TGG 0.569601 tig0004987:-13798 Msa1341950:CDS
CAGGTCAAAACGGCTATGGT+TGG 0.571924 tig0004987:-8558 Msa1341950:CDS
GGCTCAATCCACAGAATCCG+TGG 0.572080 tig0004987:-8876 Msa1341950:CDS
ACCTTTGTCTAAAGATAAGG+AGG 0.573969 tig0004987:-13943 Msa1341950:CDS
TGTGGAAGGGCTTCCTCCCG+AGG 0.576194 tig0004987:-11396 Msa1341950:intron
GAGCTCTCACATGAAAATGA+AGG 0.577121 tig0004987:-13990 Msa1341950:CDS
GTTTGGGAATCCGTTTCTCA+GGG 0.578296 tig0004987:-9745 Msa1341950:CDS
AAAATGAATTCTTCTAACCG+TGG 0.580478 tig0004987:-12389 Msa1341950:CDS
AGAGAACACACTTAGCTTGG+AGG 0.581855 tig0004987:-12639 Msa1341950:CDS
AGCATACATCTTCCTAACCA+TGG 0.583395 tig0004987:+14784 Msa1341950:intergenic
CTGCCCTTTCAAATAATCCA+CGG 0.586163 tig0004987:+8859 Msa1341950:intergenic
ATGGCATTGTTATCTGTGGA+AGG 0.586327 tig0004987:-11410 Msa1341950:CDS
TCAAAACGGCTATGGTTGGA+TGG 0.586926 tig0004987:-8554 Msa1341950:CDS
GGTTCACTTGGGGAAAGAGA+TGG 0.587707 tig0004987:-15399 Msa1341950:CDS
GTACCAGGTCAAAACGGCTA+TGG 0.592964 tig0004987:-8562 Msa1341950:intron
TGGGAATTGATATTAATGCT+GGG 0.592965 tig0004987:-13803 Msa1341950:CDS
ATAATCCCTTGAATATGTCT+GGG 0.593366 tig0004987:-15458 Msa1341950:CDS
CCGTAACCCAGCTTCCGGAT+GGG 0.594994 tig0004987:+7859 Msa1341950:intergenic
AAAATACGTCGAGCTGCAGA+AGG 0.595640 tig0004987:+8759 Msa1341950:intergenic
ATCAGTGGATGCCTATTCGA+AGG 0.597051 tig0004987:-13710 Msa1341950:CDS
TGGCATTGTTATCTGTGGAA+GGG 0.597415 tig0004987:-11409 Msa1341950:CDS
ATTACATAAGGATGCTTCAG+AGG 0.597554 tig0004987:-9795 Msa1341950:CDS
CAACTGCTTAGAGCACGTCA+AGG 0.599219 tig0004987:-11017 Msa1341950:CDS
AACTGCTTAGAGCACGTCAA+GGG 0.603024 tig0004987:-11016 Msa1341950:CDS
TCACATGAAAATGAAGGCGG+AGG 0.604343 tig0004987:-13984 Msa1341950:CDS
TGCTAGAGTCGGAGAAGAAG+GGG 0.604644 tig0004987:-14075 Msa1341950:CDS
ATATACACATTTGATTTGTG+GGG 0.606321 tig0004987:+7812 Msa1341950:intergenic
AGTGTGTTCTCTGTCCAAGT+AGG 0.607389 tig0004987:+12650 Msa1341950:intergenic
TGAAGCACTCGAAACAGAAG+AGG 0.607630 tig0004987:-13505 Msa1341950:CDS
GACTTTGCCAAAGCTCGACA+TGG 0.608155 tig0004987:+12359 Msa1341950:intergenic
CTTCTAGAGATTGTGATCAG+TGG 0.608924 tig0004987:-13725 Msa1341950:CDS
ATGAAATGTTAAATAAAACC+AGG 0.609052 tig0004987:-15140 Msa1341950:CDS
AATTCATTGACTTCTATGGT+GGG 0.613871 tig0004987:-13389 Msa1341950:CDS
AATAGTCATGGTGCTAGAGT+CGG 0.614865 tig0004987:-14086 Msa1341950:CDS
GCATACCATAAATATAGAAG+AGG 0.615993 tig0004987:+11164 Msa1341950:intergenic
GCTAACTTCTGGATGTGATG+CGG 0.619258 tig0004987:-10895 Msa1341950:CDS
GAATCAAAGTGGTTCACTTG+GGG 0.619557 tig0004987:-15409 Msa1341950:CDS
TCTGATAGGAGCAGAGTGGT+GGG 0.619562 tig0004987:-7942 Msa1341950:three_prime_UTR
TGATATGGCATTGTTATCTG+TGG 0.623363 tig0004987:-11414 Msa1341950:CDS
TCTTCCAAAACGTGATTACG+TGG 0.625230 tig0004987:+12446 Msa1341950:intergenic
GGGAGTTCAACAAACTGACA+AGG 0.625965 tig0004987:-15119 Msa1341950:CDS
CCAAGAGCAGATCAATAAGT+CGG 0.629491 tig0004987:+8393 Msa1341950:intergenic
AAAAGCCAGACAACTACAGA+TGG 0.630771 tig0004987:+8927 Msa1341950:intergenic
TGCTCTGTGAGTAGCAAAGG+AGG 0.632640 tig0004987:+14140 Msa1341950:intergenic
TTGTATTGGTGGAATCAAAG+TGG 0.634447 tig0004987:-15420 Msa1341950:CDS
CTCGACATGGCGTAACCCCA+CGG 0.634685 tig0004987:+12372 Msa1341950:intergenic
ATAAGGTTGCAGGAATGCAA+CGG 0.637235 tig0004987:-15047 Msa1341950:CDS
ATGATAAAATGAAGTCTGCT+GGG 0.641434 tig0004987:-15359 Msa1341950:CDS
TATGGAGGATAATCAAGATG+AGG 0.643787 tig0004987:-13880 Msa1341950:CDS
AAGTTAATGACACTTTGACC+TGG 0.647706 tig0004987:-13770 Msa1341950:CDS
TTGTCATACGAGATGTCTAG+AGG 0.649299 tig0004987:-8900 Msa1341950:CDS
GACTGAAGGGATATAGCTGG+AGG 0.651632 tig0004987:+9722 Msa1341950:intergenic
AGTCGGATTCTCGACAACAA+AGG 0.653317 tig0004987:+8410 Msa1341950:intergenic
CTCTCACATGAAAATGAAGG+CGG 0.657419 tig0004987:-13987 Msa1341950:CDS
GAGCTTGCAAATAACACTAA+CGG 0.658106 tig0004987:-11134 Msa1341950:CDS
TGAAATGTTAAATAAAACCA+GGG 0.660472 tig0004987:-15139 Msa1341950:CDS
AATGAATTCTTCTAACCGTG+GGG 0.661218 tig0004987:-12387 Msa1341950:CDS
TGTCGCCCAGACATATTCAA+GGG 0.662414 tig0004987:+15453 Msa1341950:intergenic
TTCTATTAGGAAGTTCCATG+AGG 0.662474 tig0004987:-12526 Msa1341950:CDS
TTCAGCCTGAAATAAAGCAG+TGG 0.668193 tig0004987:+14184 Msa1341950:intergenic
TAGGCAACGAGTCGTCAAAG+AGG 0.669463 tig0004987:-14012 Msa1341950:CDS
AATACAGTACATACCTCGGG+AGG 0.671521 tig0004987:+11383 Msa1341950:intergenic
ACACAACGTCTAATAAATTG+CGG 0.684041 tig0004987:-9660 Msa1341950:CDS
GGAGTTCAACAAACTGACAA+GGG 0.685275 tig0004987:-15118 Msa1341950:CDS
TCATACGAGATGTCTAGAGG+TGG 0.692905 tig0004987:-8897 Msa1341950:CDS
GGGAATTGATATTAATGCTG+GGG 0.694418 tig0004987:-13802 Msa1341950:CDS
GCTCCTATCAGATATTCACA+TGG 0.694687 tig0004987:+7953 Msa1341950:intergenic
TGGTGTATATGCACGAAGAG+AGG 0.702422 tig0004987:-11474 Msa1341950:CDS
TTTGCAGCTCAGTTGTACTG+TGG 0.704524 tig0004987:-8821 Msa1341950:CDS
CACATGGTTGGAGAAAGAGG+AGG 0.728895 tig0004987:-14039 Msa1341950:CDS
CCTTTGTCTAAAGATAAGGA+GGG 0.731594 tig0004987:-13942 Msa1341950:CDS
CAACGTCTAATAAATTGCGG+CGG 0.732271 tig0004987:-9657 Msa1341950:CDS
CTTGCAAATAACACTAACGG+TGG 0.740720 tig0004987:-11131 Msa1341950:CDS
TGTGCTATGAAATGATGACA+GGG 0.746438 tig0004987:-7917 Msa1341950:three_prime_UTR
AATATCTGATAGGAGCAGAG+TGG 0.802595 tig0004987:-7946 Msa1341950:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGCAAAAAAATAAATAAA+AGG + tig0004987:11901-11920 Msa1341950:intergenic 10.0%
!!! TATTATTTATTTTTTTTGGT+AGG - tig0004987:12450-12469 Msa1341950:CDS 10.0%
!!! ATTATTTATTTTTTTTGGTA+GGG - tig0004987:12451-12470 Msa1341950:CDS 10.0%
!!! ATTTGGAAATATATTATTTT+AGG + tig0004987:13606-13625 Msa1341950:intergenic 10.0%
!!! TATATTAATTTTTCAGAAAA+AGG + tig0004987:13847-13866 Msa1341950:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - tig0004987:12866-12885 Msa1341950:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - tig0004987:12866-12885 Msa1341950:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - tig0004987:12866-12885 Msa1341950:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - tig0004987:12866-12885 Msa1341950:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - tig0004987:12866-12885 Msa1341950:intron 100.0%
!! GATAATAAATTGAAAAAAGA+TGG + tig0004987:8477-8496 Msa1341950:intergenic 15.0%
!! TTATAAATTTAACATCATAC+TGG - tig0004987:10948-10967 Msa1341950:CDS 15.0%
!! GATCAAAAATAAAATTTCAT+TGG - tig0004987:11511-11530 Msa1341950:intron 15.0%
!!! TCTAATTTTTTTTGACTTTT+CGG - tig0004987:11598-11617 Msa1341950:intron 15.0%
!!! AAACTTTGAAAAAGTATAAA+GGG + tig0004987:11798-11817 Msa1341950:intergenic 15.0%
!!! AAAACTTTGAAAAAGTATAA+AGG + tig0004987:11799-11818 Msa1341950:intergenic 15.0%
!! CATTAGTTATTGTAAAATTT+AGG - tig0004987:12412-12431 Msa1341950:CDS 15.0%
!!! TTTTGTTTAACTATTACATA+AGG - tig0004987:13323-13342 Msa1341950:intron 15.0%
!!! AATTCTTTAACTTAATAGAT+TGG - tig0004987:13817-13836 Msa1341950:CDS 15.0%
!! AATATATAGAAGTTCATTAA+AGG + tig0004987:15382-15401 Msa1341950:intergenic 15.0%
!!! TGTTTTATCCATTTTTAAAT+TGG - tig0004987:15413-15432 Msa1341950:CDS 15.0%
!!! GTTTTATCCATTTTTAAATT+GGG - tig0004987:15414-15433 Msa1341950:CDS 15.0%
!!! AAGTTTTAACGATAAATAAT+TGG + tig0004987:15448-15467 Msa1341950:intergenic 15.0%
!! ATGAAATGTTAAATAAAACC+AGG - tig0004987:7990-8009 Msa1341950:intron 20.0%
!! TGAAATGTTAAATAAAACCA+GGG - tig0004987:7991-8010 Msa1341950:intron 20.0%
!!! TTGTTTGATAAGCTTTTAAA+AGG + tig0004987:8204-8223 Msa1341950:intergenic 20.0%
!! TGGATGAATGATAATATTAT+AGG - tig0004987:8533-8552 Msa1341950:CDS 20.0%
!! GGATGAATGATAATATTATA+GGG - tig0004987:8534-8553 Msa1341950:CDS 20.0%
!!! GTATTATTTTGACAACAATT+TGG - tig0004987:9982-10001 Msa1341950:intron 20.0%
!!! CTTGTATTTTCAACATAATT+TGG - tig0004987:10176-10195 Msa1341950:intron 20.0%
!! CATAATTTGGATAGTTATAA+TGG - tig0004987:10189-10208 Msa1341950:intron 20.0%
!! GATGGTTAATAAATATAACA+AGG + tig0004987:10294-10313 Msa1341950:intergenic 20.0%
!!! TTCACTTTAGATTTTCTATT+AGG - tig0004987:10591-10610 Msa1341950:intron 20.0%
!! AATTTATTTATGCTACAGAA+AGG + tig0004987:10850-10869 Msa1341950:intergenic 20.0%
!! TAAAGTTCAAATATCAGTTT+AGG + tig0004987:10931-10950 Msa1341950:intergenic 20.0%
!! ATCATGTTAAAATTACAGTT+AGG - tig0004987:10972-10991 Msa1341950:CDS 20.0%
!! TCATGTTAAAATTACAGTTA+GGG - tig0004987:10973-10992 Msa1341950:CDS 20.0%
!!! AACTTTGAAAAAGTATAAAG+GGG + tig0004987:11797-11816 Msa1341950:intergenic 20.0%
!! GCAAAAAAATAAATAAAAGG+AGG + tig0004987:11898-11917 Msa1341950:intergenic 20.0%
!! TGTAATGACAGAATTATTAT+AGG + tig0004987:12696-12715 Msa1341950:intergenic 20.0%
!! TTGATCTATTATGATTCAAT+TGG - tig0004987:12962-12981 Msa1341950:intron 20.0%
!! ATTTATACTTTCAAAGCATA+AGG + tig0004987:13529-13548 Msa1341950:intergenic 20.0%
!! AATGACAAGTTATTCATATT+TGG + tig0004987:13623-13642 Msa1341950:intergenic 20.0%
!! TTCTTAGGTATTATGAAAAT+AGG - tig0004987:13642-13661 Msa1341950:intron 20.0%
!!! ATCAAACTTTTATTGATATC+AGG + tig0004987:15102-15121 Msa1341950:intergenic 20.0%
!!! AATCAAATGTGTATATCTTT+TGG - tig0004987:15325-15344 Msa1341950:CDS 20.0%
!!! ATCAAATGTGTATATCTTTT+GGG - tig0004987:15326-15345 Msa1341950:CDS 20.0%
! TTTATACCTTTATCAGATGT+TGG - tig0004987:7896-7915 Msa1341950:three_prime_UTR 25.0%
!!! TGATGATGAAATTTTAGAGT+CGG + tig0004987:7951-7970 Msa1341950:intergenic 25.0%
! TGAAAAGAAAATTAGCATTC+TGG - tig0004987:8132-8151 Msa1341950:intron 25.0%
!! GTAATAGATTTTCATTCTCT+GGG + tig0004987:8177-8196 Msa1341950:intergenic 25.0%
!! AGTAATAGATTTTCATTCTC+TGG + tig0004987:8178-8197 Msa1341950:intergenic 25.0%
!!! TTTTTTTTTCCCCTTAAAAG+TGG - tig0004987:8576-8595 Msa1341950:intron 25.0%
!!! TGTCATTTTTATCCATTGAT+GGG - tig0004987:8645-8664 Msa1341950:intron 25.0%
!!! ACCTATTTTTGCTTACATTT+TGG - tig0004987:8686-8705 Msa1341950:intron 25.0%
! TCCAAAATGTAAGCAAAAAT+AGG + tig0004987:8690-8709 Msa1341950:intergenic 25.0%
!!! ATCCTCAAATAGGTTTTAAA+TGG - tig0004987:8785-8804 Msa1341950:CDS 25.0%
!! TTCCATTTAAAACCTATTTG+AGG + tig0004987:8790-8809 Msa1341950:intergenic 25.0%
!!! GGAAAAACTTTATTTTTAGC+AGG - tig0004987:8806-8825 Msa1341950:CDS 25.0%
!! GTCAGTTTCATTTTCAAAAT+TGG + tig0004987:9219-9238 Msa1341950:intergenic 25.0%
!! AAATGAAACTGACATTGATT+TGG - tig0004987:9226-9245 Msa1341950:intron 25.0%
! ATATGCATATCTGTCAAATA+TGG + tig0004987:9883-9902 Msa1341950:intergenic 25.0%
!!! TATTTTGACAACAATTTGGA+TGG - tig0004987:9986-10005 Msa1341950:intron 25.0%
! GTTAATGCAGTTCAAATATA+TGG - tig0004987:10008-10027 Msa1341950:intron 25.0%
!! GTTGAAAATACAAGATTTTC+AGG + tig0004987:10170-10189 Msa1341950:intergenic 25.0%
! ATTTGAACACCTGAAAATTA+TGG - tig0004987:10231-10250 Msa1341950:intron 25.0%
!! CATAATCATCCATAATTTTC+AGG + tig0004987:10243-10262 Msa1341950:intergenic 25.0%
! TTGTTGTCAAATTTGTCAAA+AGG - tig0004987:10371-10390 Msa1341950:intron 25.0%
!! TTATAATGTGTTGATGTCTT+TGG - tig0004987:10417-10436 Msa1341950:intron 25.0%
!! AAATCTAAAGTGAAACTAGT+AGG + tig0004987:10585-10604 Msa1341950:intergenic 25.0%
! AGGTTATTACAATATTTCCA+TGG + tig0004987:10911-10930 Msa1341950:intergenic 25.0%
! TAACTCATAAAGTTAGTTAC+AGG + tig0004987:11128-11147 Msa1341950:intergenic 25.0%
! TAACTTTATGAGTTAGTTAC+AGG - tig0004987:11133-11152 Msa1341950:CDS 25.0%
!!! ACATTTTAACCATAAGAACT+GGG + tig0004987:11440-11459 Msa1341950:intergenic 25.0%
!!! AACATTTTAACCATAAGAAC+TGG + tig0004987:11441-11460 Msa1341950:intergenic 25.0%
! GTTTGTATATTGTTCATTGT+AGG - tig0004987:11620-11639 Msa1341950:intron 25.0%
! ACAGTGCGTATTAAAATTTA+TGG - tig0004987:11853-11872 Msa1341950:intron 25.0%
!!! AATTGCATTCATTGACTTAA+TGG - tig0004987:11920-11939 Msa1341950:intron 25.0%
! ATACATATATTGTCTTGCTT+AGG - tig0004987:12044-12063 Msa1341950:intron 25.0%
!! TTGATGCTTGACTTTTAAAT+GGG + tig0004987:12088-12107 Msa1341950:intergenic 25.0%
!!! TTTATTTTTTTTGGTAGGGT+CGG - tig0004987:12455-12474 Msa1341950:CDS 25.0%
!!! CTCAAATTGTTTTGCTAAAT+GGG - tig0004987:12668-12687 Msa1341950:CDS 25.0%
! TATACACTTACTGATAGTAA+AGG + tig0004987:12925-12944 Msa1341950:intergenic 25.0%
! GATCAATACAAGTTTATGTA+AGG + tig0004987:12948-12967 Msa1341950:intergenic 25.0%
!! TGATTCAATTGGAATTTGTT+TGG - tig0004987:12973-12992 Msa1341950:intron 25.0%
! TAAATTACCCTTATGTTTCT+AGG + tig0004987:13061-13080 Msa1341950:intergenic 25.0%
!! GTTATGTAGAATCATTTTGT+CGG - tig0004987:13186-13205 Msa1341950:intron 25.0%
!! TTATGTAGAATCATTTTGTC+GGG - tig0004987:13187-13206 Msa1341950:intron 25.0%
!!! AAAATTCAAGTTGATAGCTA+TGG + tig0004987:13306-13325 Msa1341950:intergenic 25.0%
!! TGAATAACTTGTCATTTCTT+AGG - tig0004987:13627-13646 Msa1341950:intron 25.0%
! CAATTGGAAGAAAAAAGATA+CGG + tig0004987:13885-13904 Msa1341950:intergenic 25.0%
! TTTGTGAGACTTAAAACAAT+TGG + tig0004987:13901-13920 Msa1341950:intergenic 25.0%
!! TTATTATTGCCTTATTCTTC+TGG - tig0004987:13964-13983 Msa1341950:CDS 25.0%
!!! AACTTGCTACAATTGTAAAA+GGG + tig0004987:14057-14076 Msa1341950:intergenic 25.0%
!!! TAACTTGCTACAATTGTAAA+AGG + tig0004987:14058-14077 Msa1341950:intergenic 25.0%
!! TTTTACAATTGTAGCAAGTT+AGG - tig0004987:14057-14076 Msa1341950:CDS 25.0%
! AAGTTGCAAAAATTACTAAC+AGG + tig0004987:14126-14145 Msa1341950:intergenic 25.0%
!!! TATGCAGTCTAAAATTTTGT+TGG - tig0004987:14803-14822 Msa1341950:CDS 25.0%
! ATTTACAAGTACTTCTACAA+TGG + tig0004987:14903-14922 Msa1341950:intergenic 25.0%
! ACATTCAAATACATTATCCA+AGG + tig0004987:14938-14957 Msa1341950:intergenic 25.0%
! CTTGTAAATATATACTGAAG+TGG - tig0004987:14965-14984 Msa1341950:CDS 25.0%
!!! ATATACACATTTGATTTGTG+GGG + tig0004987:15321-15340 Msa1341950:intergenic 25.0%
!!! GATATACACATTTGATTTGT+GGG + tig0004987:15322-15341 Msa1341950:intergenic 25.0%
!!! AGATATACACATTTGATTTG+TGG + tig0004987:15323-15342 Msa1341950:intergenic 25.0%
! AAGCTTAATGAGTCATTTAT+TGG - tig0004987:15352-15371 Msa1341950:CDS 25.0%
GACATATTCAAGGGATTATA+CGG + tig0004987:7671-7690 None:intergenic 30.0%
TATAATCCCTTGAATATGTC+TGG - tig0004987:7671-7690 Msa1341950:three_prime_UTR 30.0%
ATAATCCCTTGAATATGTCT+GGG - tig0004987:7672-7691 Msa1341950:three_prime_UTR 30.0%
GACATGTTAAAGGTTTGTAT+TGG - tig0004987:7696-7715 Msa1341950:three_prime_UTR 30.0%
ATGTTAAAGGTTTGTATTGG+TGG - tig0004987:7699-7718 Msa1341950:three_prime_UTR 30.0%
ATGATAAAATGAAGTCTGCT+GGG - tig0004987:7771-7790 Msa1341950:three_prime_UTR 30.0%
!! TTCTAAAGCCATATACTTTC+CGG + tig0004987:7807-7826 Msa1341950:intergenic 30.0%
ATCATCACTTGAAGAATCTT+GGG - tig0004987:7964-7983 Msa1341950:three_prime_UTR 30.0%
AACCAAACTATTTCATCATG+CGG + tig0004987:8043-8062 Msa1341950:intergenic 30.0%
ATAGCTCAGATGTGTTAATT+GGG - tig0004987:8227-8246 Msa1341950:intron 30.0%
GAAAATACTTTGCAACATTC+TGG - tig0004987:8258-8277 Msa1341950:intron 30.0%
! ATTCTGGAAGTTACAAGTTA+TGG - tig0004987:8274-8293 Msa1341950:intron 30.0%
TTCACGCAAAAATAAGAAGA+GGG + tig0004987:8442-8461 Msa1341950:intergenic 30.0%
ATTCACGCAAAAATAAGAAG+AGG + tig0004987:8443-8462 Msa1341950:intergenic 30.0%
! TTATCTTGTTTGAACAGACT+TGG - tig0004987:8492-8511 Msa1341950:CDS 30.0%
!! ATTTTCCAACCACTTTTAAG+GGG + tig0004987:8588-8607 Msa1341950:intergenic 30.0%
!! CATTTTCCAACCACTTTTAA+GGG + tig0004987:8589-8608 Msa1341950:intergenic 30.0%
!! TCATTTTCCAACCACTTTTA+AGG + tig0004987:8590-8609 Msa1341950:intergenic 30.0%
!!! CTGTCATTTTTATCCATTGA+TGG - tig0004987:8644-8663 Msa1341950:intron 30.0%
ATTACTAAGTGACACAATCA+TGG + tig0004987:8737-8756 Msa1341950:intergenic 30.0%
ATTTCAGAAGATCCTCAAAT+AGG - tig0004987:8775-8794 Msa1341950:CDS 30.0%
AGAACCTTTGTCTAAAGATA+AGG - tig0004987:9184-9203 Msa1341950:intron 30.0%
!! AACTGACATTGATTTGGTTA+TGG - tig0004987:9232-9251 Msa1341950:intron 30.0%
AAATTCTCAGTATCATCTTC+AGG + tig0004987:9296-9315 Msa1341950:intergenic 30.0%
TGGGAATTGATATTAATGCT+GGG - tig0004987:9327-9346 Msa1341950:intron 30.0%
CATGATGTTTGTAATGAAAC+TGG + tig0004987:9554-9573 Msa1341950:intergenic 30.0%
ACCATAGAAGTCAATGAATT+GGG + tig0004987:9741-9760 Msa1341950:intergenic 30.0%
!! AATTCATTGACTTCTATGGT+GGG - tig0004987:9741-9760 Msa1341950:CDS 30.0%
! CGTCTCAATTGTAAGTTTTT+AGG - tig0004987:9768-9787 Msa1341950:CDS 30.0%
AGGTGTAAATATCACAACTT+AGG - tig0004987:9788-9807 Msa1341950:CDS 30.0%
TGGTTAACACTGTTTAAATG+AGG + tig0004987:10333-10352 Msa1341950:intergenic 30.0%
AACTTCTCTAACATAGAATC+TGG + tig0004987:10522-10541 Msa1341950:intergenic 30.0%
CTGATATGATGAAATTCGTA+CGG - tig0004987:10631-10650 Msa1341950:intron 30.0%
AAAATGAATTCTTCTAACCG+TGG - tig0004987:10741-10760 Msa1341950:intron 30.0%
AAATGAATTCTTCTAACCGT+GGG - tig0004987:10742-10761 Msa1341950:intron 30.0%
TCTCTTAAAAAGTGATAGAC+AGG - tig0004987:10794-10813 Msa1341950:intron 30.0%
TATAGTTGTAGAATGAATCC+TGG + tig0004987:11002-11021 Msa1341950:intergenic 30.0%
CTGTCTATATATAGTCTTCA+AGG + tig0004987:11096-11115 Msa1341950:intergenic 30.0%
CTATATATAGACAGACTTCA+TGG - tig0004987:11102-11121 Msa1341950:CDS 30.0%
! TAACTTGTGTTAGTTACAGT+TGG - tig0004987:11206-11225 Msa1341950:intron 30.0%
CATAGTATAGCTCTTTATCA+AGG + tig0004987:11235-11254 Msa1341950:intergenic 30.0%
! GAATTTTCAATCAAACAAGC+AGG + tig0004987:11363-11382 Msa1341950:intergenic 30.0%
GGGAGAAAAATATAACATGT+TGG + tig0004987:11420-11439 Msa1341950:intergenic 30.0%
! TATTTTTCTCCCAGTTCTTA+TGG - tig0004987:11428-11447 Msa1341950:CDS 30.0%
AAATGAAAAGCTGATCAAAG+AGG - tig0004987:11462-11481 Msa1341950:CDS 30.0%
AATGAAAAGCTGATCAAAGA+GGG - tig0004987:11463-11482 Msa1341950:CDS 30.0%
CTTACCATTTACAACAAATG+AGG + tig0004987:11567-11586 Msa1341950:intergenic 30.0%
CAATATTGATCTTGCAAGAA+AGG - tig0004987:11689-11708 Msa1341950:intron 30.0%
AGATAATACAGTACATACCT+CGG + tig0004987:11754-11773 Msa1341950:intergenic 30.0%
!! ATTCATTGACTTAATGGAGT+AGG - tig0004987:11926-11945 Msa1341950:intron 30.0%
! TAAATATAGAAGAGGTGCAT+TGG + tig0004987:11961-11980 Msa1341950:intergenic 30.0%
ATGCACCTCTTCTATATTTA+TGG - tig0004987:11961-11980 Msa1341950:intron 30.0%
GCATACCATAAATATAGAAG+AGG + tig0004987:11969-11988 Msa1341950:intergenic 30.0%
ATATTTATGGTATGCTGAAG+TGG - tig0004987:11974-11993 Msa1341950:intron 30.0%
ATATTGTCTTGCTTAGGAAA+TGG - tig0004987:12050-12069 Msa1341950:intron 30.0%
! TGATGCTTGACTTTTAAATG+GGG + tig0004987:12087-12106 Msa1341950:intergenic 30.0%
! CTTGATGCTTGACTTTTAAA+TGG + tig0004987:12089-12108 Msa1341950:intergenic 30.0%
TGAGAACAGTATTATCATCT+TGG - tig0004987:12150-12169 Msa1341950:intron 30.0%
! TTTGGATCAAGCTTTTACTA+TGG - tig0004987:12268-12287 Msa1341950:intron 30.0%
CTAAAAATCAGACTATCTAC+TGG + tig0004987:12355-12374 Msa1341950:intergenic 30.0%
TCAACTTTATAAGCTTACAG+TGG + tig0004987:12378-12397 Msa1341950:intergenic 30.0%
!!! TTATTTTTTTTGGTAGGGTC+GGG - tig0004987:12456-12475 Msa1341950:CDS 30.0%
AATACTTGGGTGAAATAGAT+AGG - tig0004987:12487-12506 Msa1341950:CDS 30.0%
ATACTTGGGTGAAATAGATA+GGG - tig0004987:12488-12507 Msa1341950:CDS 30.0%
CCATTTAGCAAAACAATTTG+AGG + tig0004987:12670-12689 Msa1341950:intergenic 30.0%
!! CCTCAAATTGTTTTGCTAAA+TGG - tig0004987:12667-12686 Msa1341950:CDS 30.0%
AAATAAGTAGAGCCTACAAA+AGG - tig0004987:12756-12775 Msa1341950:intron 30.0%
! AATTGTCGAGTGAACTTTTT+GGG + tig0004987:12821-12840 Msa1341950:intergenic 30.0%
AAAAAGTTCACTCGACAATT+GGG - tig0004987:12821-12840 Msa1341950:intron 30.0%
! AATCATTTTGTTCTGCAGAA+AGG - tig0004987:13275-13294 Msa1341950:intron 30.0%
!! TTTAAAAGTTCTGGACTGAA+GGG + tig0004987:13424-13443 Msa1341950:intergenic 30.0%
!!! TTTTAAAAGTTCTGGACTGA+AGG + tig0004987:13425-13444 Msa1341950:intergenic 30.0%
! TTCAGTCCAGAACTTTTAAA+AGG - tig0004987:13424-13443 Msa1341950:CDS 30.0%
!! ACTACACCTTTTAAAAGTTC+TGG + tig0004987:13433-13452 Msa1341950:intergenic 30.0%
!! AGAACTTTTAAAAGGTGTAG+TGG - tig0004987:13432-13451 Msa1341950:CDS 30.0%
ACACAACGTCTAATAAATTG+CGG - tig0004987:13470-13489 Msa1341950:CDS 30.0%
! ATGCTTTTAATCATAGTCTC+TGG - tig0004987:13547-13566 Msa1341950:intron 30.0%
! TGCTTTTAATCATAGTCTCT+GGG - tig0004987:13548-13567 Msa1341950:intron 30.0%
AGATTAATGCATGAGAGAAA+GGG + tig0004987:13932-13951 Msa1341950:intergenic 30.0%
AAGATTAATGCATGAGAGAA+AGG + tig0004987:13933-13952 Msa1341950:intergenic 30.0%
ATTTACAAGCCAGAAGAATA+AGG + tig0004987:13976-13995 Msa1341950:intergenic 30.0%
! ATTGTAGCAAGTTAGGTTTT+TGG - tig0004987:14064-14083 Msa1341950:CDS 30.0%
! AATCCGTGGATTATTTGAAA+GGG - tig0004987:14268-14287 Msa1341950:CDS 30.0%
TTTATGTAAATGTGTGTACC+AGG - tig0004987:14553-14572 Msa1341950:intron 30.0%
! GAAGTACTTGTAAATTCAGA+AGG - tig0004987:14908-14927 Msa1341950:intron 30.0%
TAAATTCAGAAGGTAATCCT+TGG - tig0004987:14918-14937 Msa1341950:CDS 30.0%
!!! CTTTTGTTGTTCAATGATTG+TGG - tig0004987:15025-15044 Msa1341950:CDS 30.0%
GTGTAAATTGAACATCTGAT+AGG - tig0004987:15140-15159 Msa1341950:CDS 30.0%
AATGATGACAGGGTAAAATA+TGG - tig0004987:15223-15242 Msa1341950:CDS 30.0%
GTTAGCACCCAATTTAAAAA+TGG + tig0004987:15424-15443 Msa1341950:intergenic 30.0%
! TTGTATTGGTGGAATCAAAG+TGG - tig0004987:7710-7729 Msa1341950:three_prime_UTR 35.0%
GATGATAAAATGAAGTCTGC+TGG - tig0004987:7770-7789 Msa1341950:three_prime_UTR 35.0%
! GTTGTATGAGGTGACAATTT+TGG + tig0004987:7866-7885 Msa1341950:intergenic 35.0%
AACTCATCTTGTGTTGTATG+AGG + tig0004987:7878-7897 Msa1341950:intergenic 35.0%
GATGTACCAACATCTGATAA+AGG + tig0004987:7905-7924 Msa1341950:intergenic 35.0%
CATCATCACTTGAAGAATCT+TGG - tig0004987:7963-7982 Msa1341950:three_prime_UTR 35.0%
ACCAAACTATTTCATCATGC+GGG + tig0004987:8042-8061 Msa1341950:intergenic 35.0%
! GAAAATTAGCATTCTGGAGA+AGG - tig0004987:8138-8157 Msa1341950:intron 35.0%
GATAGCTCAGATGTGTTAAT+TGG - tig0004987:8226-8245 Msa1341950:intron 35.0%
AGATGTGTTAATTGGGAGAT+GGG - tig0004987:8234-8253 Msa1341950:intron 35.0%
AATTCTTGCATGTTGTTCAG+AGG - tig0004987:8301-8320 Msa1341950:intron 35.0%
! TTTTTCCCCTTAAAAGTGGT+TGG - tig0004987:8580-8599 Msa1341950:intron 35.0%
AACTTTGTTCTTCCCATCAA+TGG + tig0004987:8660-8679 Msa1341950:intergenic 35.0%
! AACGACTGTTTGAGCATTTT+TGG - tig0004987:9021-9040 Msa1341950:intron 35.0%
!!! GAGCATTTTTGGAATAGTCA+TGG - tig0004987:9032-9051 Msa1341950:intron 35.0%
ACCTTTGTCTAAAGATAAGG+AGG - tig0004987:9187-9206 Msa1341950:intron 35.0%
CCTTTGTCTAAAGATAAGGA+GGG - tig0004987:9188-9207 Msa1341950:intron 35.0%
!! TGACATTGATTTGGTTATGG+AGG - tig0004987:9235-9254 Msa1341950:intron 35.0%
TATGGAGGATAATCAAGATG+AGG - tig0004987:9250-9269 Msa1341950:intron 35.0%
CTGGGAATTGATATTAATGC+TGG - tig0004987:9326-9345 Msa1341950:intron 35.0%
GGGAATTGATATTAATGCTG+GGG - tig0004987:9328-9347 Msa1341950:intron 35.0%
ATTGATATTAATGCTGGGGA+TGG - tig0004987:9332-9351 Msa1341950:intron 35.0%
TTGATATTAATGCTGGGGAT+GGG - tig0004987:9333-9352 Msa1341950:intron 35.0%
AAGTTAATGACACTTTGACC+TGG - tig0004987:9360-9379 Msa1341950:intron 35.0%
AAAAGAGGCTCGACTATATT+TGG - tig0004987:9712-9731 Msa1341950:CDS 35.0%
!! TCCCAATTCATTGACTTCTA+TGG - tig0004987:9737-9756 Msa1341950:CDS 35.0%
CACCATAGAAGTCAATGAAT+TGG + tig0004987:9742-9761 Msa1341950:intergenic 35.0%
!! CAATTCATTGACTTCTATGG+TGG - tig0004987:9740-9759 Msa1341950:CDS 35.0%
AACCTAATACTTTGAACCAG+CGG + tig0004987:9850-9869 Msa1341950:intergenic 35.0%
GCATATCTGTCAAATATGGA+AGG + tig0004987:9879-9898 Msa1341950:intergenic 35.0%
CTAGAGAACTCCATTATTAG+TGG - tig0004987:9909-9928 Msa1341950:intron 35.0%
TCACATACACCTGAAAATCA+TGG + tig0004987:10108-10127 Msa1341950:intergenic 35.0%
ATGAGGTTAATTACGTTCAG+TGG + tig0004987:10316-10335 Msa1341950:intergenic 35.0%
AACAAAAGTCGACAAGAACT+TGG + tig0004987:10356-10375 Msa1341950:intergenic 35.0%
!! CTGCTTCATTTTTCTTCTGT+AGG - tig0004987:10442-10461 Msa1341950:intron 35.0%
TTTCAACAAACAGTCCTACT+TGG - tig0004987:10466-10485 Msa1341950:intron 35.0%
! GTGCTTTTGTCAAAACGTTA+TGG + tig0004987:10554-10573 Msa1341950:intergenic 35.0%
TTCTATTAGGAAGTTCCATG+AGG - tig0004987:10604-10623 Msa1341950:intron 35.0%
! TTTTCCACGTAATCACGTTT+TGG - tig0004987:10680-10699 Msa1341950:intron 35.0%
AATGAATTCTTCTAACCGTG+GGG - tig0004987:10743-10762 Msa1341950:intron 35.0%
AAATTACAGTTAGGGTTACC+AGG - tig0004987:10981-11000 Msa1341950:CDS 35.0%
!! TCTGCCTCATTTGTTGTAAA+TGG - tig0004987:11560-11579 Msa1341950:intron 35.0%
!! TTGTAGGATGTTTTGTTGTG+TGG - tig0004987:11636-11655 Msa1341950:intron 35.0%
!! TGCAAGAAAGGTGTTTGATA+TGG - tig0004987:11701-11720 Msa1341950:intron 35.0%
TGATATGGCATTGTTATCTG+TGG - tig0004987:11716-11735 Msa1341950:intron 35.0%
GATAATACAGTACATACCTC+GGG + tig0004987:11753-11772 Msa1341950:intergenic 35.0%
GTGTCTGTATATACAAGTGT+TGG + tig0004987:11835-11854 Msa1341950:intergenic 35.0%
AAAGGAGGTTGTGTATACAT+AGG + tig0004987:11883-11902 Msa1341950:intergenic 35.0%
GAGCTTGCAAATAACACTAA+CGG - tig0004987:11996-12015 Msa1341950:intron 35.0%
GTATTATCATCTTGGTTTCG+TGG - tig0004987:12158-12177 Msa1341950:intron 35.0%
ATGTTCTGCTTCATTGTTTG+AGG - tig0004987:12211-12230 Msa1341950:intron 35.0%
ACAAATGAAGATGCATAACC+TGG + tig0004987:12299-12318 Msa1341950:intergenic 35.0%
!! TCGGGTTGATTGAAATACTT+GGG - tig0004987:12474-12493 Msa1341950:CDS 35.0%
TACTTGGGTGAAATAGATAG+GGG - tig0004987:12489-12508 Msa1341950:CDS 35.0%
GGCTAAACTTCGAGTATTAA+CGG - tig0004987:12510-12529 Msa1341950:CDS 35.0%
! GGTGTTGGATTGAAGAAATT+GGG + tig0004987:12649-12668 Msa1341950:intergenic 35.0%
!! AGGTGTTGGATTGAAGAAAT+TGG + tig0004987:12650-12669 Msa1341950:intergenic 35.0%
! AGCAAAACAATTTGAGGTGT+TGG + tig0004987:12664-12683 Msa1341950:intergenic 35.0%
!! TTTTGGGTGCTTATAGAGAA+GGG + tig0004987:12805-12824 Msa1341950:intergenic 35.0%
!!! TTTTTGGGTGCTTATAGAGA+AGG + tig0004987:12806-12825 Msa1341950:intergenic 35.0%
! CAATTGTCGAGTGAACTTTT+TGG + tig0004987:12822-12841 Msa1341950:intergenic 35.0%
CAAAAAGTTCACTCGACAAT+TGG - tig0004987:12820-12839 Msa1341950:intron 35.0%
AAAAGTTCACTCGACAATTG+GGG - tig0004987:12822-12841 Msa1341950:intron 35.0%
AGTCTGACCTAGAAACATAA+GGG - tig0004987:13051-13070 Msa1341950:intron 35.0%
GTGTGCTAATAGATAACTAG+TGG + tig0004987:13121-13140 Msa1341950:intergenic 35.0%
ATTACATAAGGATGCTTCAG+AGG - tig0004987:13335-13354 Msa1341950:intron 35.0%
AATCAGGTCTGATGAAAGTT+TGG - tig0004987:13368-13387 Msa1341950:intron 35.0%
ATCAGGTCTGATGAAAGTTT+GGG - tig0004987:13369-13388 Msa1341950:intron 35.0%
! TTAAAAGGTGTAGTGGAAGT+TGG - tig0004987:13439-13458 Msa1341950:CDS 35.0%
GCAATTTATTAGACGTTGTG+TGG + tig0004987:13471-13490 Msa1341950:intergenic 35.0%
!!! TGTGTAGCTTTTTTTTCAGC+AGG - tig0004987:13689-13708 Msa1341950:intron 35.0%
!!! GTTTTTGGTTTCCTGCATAA+TGG - tig0004987:14079-14098 Msa1341950:CDS 35.0%
! GAATCCGTGGATTATTTGAA+AGG - tig0004987:14267-14286 Msa1341950:CDS 35.0%
TTAAATACAAGTCCTCACCA+GGG + tig0004987:14419-14438 Msa1341950:intergenic 35.0%
TTTAAATACAAGTCCTCACC+AGG + tig0004987:14420-14439 Msa1341950:intergenic 35.0%
!! CTTATAGCTTTGAAGCTTTG+GGG + tig0004987:14456-14475 Msa1341950:intergenic 35.0%
!! CCTTATAGCTTTGAAGCTTT+GGG + tig0004987:14457-14476 Msa1341950:intergenic 35.0%
CCAAAGCTTCAAAGCTATAA+GGG - tig0004987:14455-14474 Msa1341950:intron 35.0%
AAACTGAACTCTGTTCTTAC+TGG - tig0004987:14606-14625 Msa1341950:intron 35.0%
!!! AAGCTTTTTTTACCAGAGCA+TGG + tig0004987:14861-14880 Msa1341950:intergenic 35.0%
TGTGCTATGAAATGATGACA+GGG - tig0004987:15213-15232 Msa1341950:CDS 35.0%
TGGAATCAAAGTGGTTCACT+TGG - tig0004987:7719-7738 Msa1341950:three_prime_UTR 40.0%
GGAATCAAAGTGGTTCACTT+GGG - tig0004987:7720-7739 Msa1341950:three_prime_UTR 40.0%
GAATCAAAGTGGTTCACTTG+GGG - tig0004987:7721-7740 Msa1341950:three_prime_UTR 40.0%
AGATGGCGATATTGATGCTT+TGG - tig0004987:7748-7767 Msa1341950:three_prime_UTR 40.0%
! ATACTGGTCCGGAAAGTATA+TGG - tig0004987:7796-7815 Msa1341950:three_prime_UTR 40.0%
!!! ATTTTGGAGCAACAAGACGT+AGG + tig0004987:7850-7869 Msa1341950:intergenic 40.0%
TCAGATGTTGGTACATCTCA+AGG - tig0004987:7908-7927 Msa1341950:three_prime_UTR 40.0%
GGAGTTCAACAAACTGACAA+GGG - tig0004987:8012-8031 Msa1341950:intron 40.0%
ACCCGCATGATGAAATAGTT+TGG - tig0004987:8038-8057 Msa1341950:intron 40.0%
! TTTTGCCGAGTTCCAAGATA+AGG - tig0004987:8066-8085 Msa1341950:intron 40.0%
TGCAACCTTATCTTGGAACT+CGG + tig0004987:8074-8093 Msa1341950:intergenic 40.0%
ATAAGGTTGCAGGAATGCAA+CGG - tig0004987:8083-8102 Msa1341950:intron 40.0%
CAGATGTGTTAATTGGGAGA+TGG - tig0004987:8233-8252 Msa1341950:intron 40.0%
GAGGAATTTCTCCAAGTTCA+AGG - tig0004987:8320-8339 Msa1341950:intron 40.0%
AACCATGGAAACCTTGAACT+TGG + tig0004987:8334-8353 Msa1341950:intergenic 40.0%
AGTTCAAGGTTTCCATGGTT+AGG - tig0004987:8334-8353 Msa1341950:intron 40.0%
AGCATACATCTTCCTAACCA+TGG + tig0004987:8349-8368 Msa1341950:intergenic 40.0%
! ATTGAAGCTTTGTCTGCTTC+AGG - tig0004987:8375-8394 Msa1341950:three_prime_UTR 40.0%
TCAAGCTGATGATTCTTCAC+CGG - tig0004987:8833-8852 Msa1341950:CDS 40.0%
AGTTCTTGCTGAACAATTGC+AGG + tig0004987:8861-8880 Msa1341950:intergenic 40.0%
TCAGTCTTTGCAGATTTGAG+TGG - tig0004987:8901-8920 Msa1341950:CDS 40.0%
!! AGTTGCCACTGCTTTATTTC+AGG - tig0004987:8941-8960 Msa1341950:intron 40.0%
TTCAGCCTGAAATAAAGCAG+TGG + tig0004987:8949-8968 Msa1341950:intergenic 40.0%
! AATAGTCATGGTGCTAGAGT+CGG - tig0004987:9044-9063 Msa1341950:intron 40.0%
GAGCTCTCACATGAAAATGA+AGG - tig0004987:9140-9159 Msa1341950:intron 40.0%
CTCTCACATGAAAATGAAGG+CGG - tig0004987:9143-9162 Msa1341950:intron 40.0%
CCCTCCTTATCTTTAGACAA+AGG + tig0004987:9191-9210 Msa1341950:intergenic 40.0%
GTCTAAAGATAAGGAGGGTA+CGG - tig0004987:9193-9212 Msa1341950:intron 40.0%
!! TGAGAATTTGCTAAAGCTGC+TGG - tig0004987:9307-9326 Msa1341950:intron 40.0%
!! GAGAATTTGCTAAAGCTGCT+GGG - tig0004987:9308-9327 Msa1341950:intron 40.0%
TGATATTAATGCTGGGGATG+GGG - tig0004987:9334-9353 Msa1341950:intron 40.0%
ACACTTTGACCTGGATCAAA+TGG - tig0004987:9369-9388 Msa1341950:intron 40.0%
TTCTTCTGACCATTTGATCC+AGG + tig0004987:9381-9400 Msa1341950:intergenic 40.0%
! CTTCTAGAGATTGTGATCAG+TGG - tig0004987:9405-9424 Msa1341950:intron 40.0%
ATGCCTATTCGAAGGAAGTT+AGG - tig0004987:9428-9447 Msa1341950:intron 40.0%
CTACCTAACTTCCTTCGAAT+AGG + tig0004987:9434-9453 Msa1341950:intergenic 40.0%
CTATTCGAAGGAAGTTAGGT+AGG - tig0004987:9432-9451 Msa1341950:intron 40.0%
GAAGAGGTTGTATCTGTTCA+TGG + tig0004987:9599-9618 Msa1341950:intergenic 40.0%
! CTTTTGTGTTCAGGGTGAAA+AGG + tig0004987:9697-9716 Msa1341950:intergenic 40.0%
TTTCACCCTGAACACAAAAG+AGG - tig0004987:9697-9716 Msa1341950:CDS 40.0%
AGCACATCAGACTCTTAACA+TGG + tig0004987:9826-9845 Msa1341950:intergenic 40.0%
!! TACCGCTGGTTCAAAGTATT+AGG - tig0004987:9845-9864 Msa1341950:intron 40.0%
AAGGACAGAGCCACTAATAA+TGG + tig0004987:9922-9941 Msa1341950:intergenic 40.0%
! GGTGTTATGTGGATGGTTAT+TGG + tig0004987:10080-10099 Msa1341950:intergenic 40.0%
!! TCATGGTTCATGGTGTTATG+TGG + tig0004987:10091-10110 Msa1341950:intergenic 40.0%
! CACCATGAACCATGATTTTC+AGG - tig0004987:10096-10115 Msa1341950:intron 40.0%
CACCTGAAAATCATGGTTCA+TGG + tig0004987:10101-10120 Msa1341950:intergenic 40.0%
GGATGATTATGCTCAGTGAA+TGG - tig0004987:10252-10271 Msa1341950:intron 40.0%
GGTTAATTACGTTCAGTGGA+TGG + tig0004987:10312-10331 Msa1341950:intergenic 40.0%
AAAAGTCGACAAGAACTTGG+TGG + tig0004987:10353-10372 Msa1341950:intergenic 40.0%
CATCATATCAGCATTCCTCA+TGG + tig0004987:10622-10641 Msa1341950:intergenic 40.0%
TCTTCCAAAACGTGATTACG+TGG + tig0004987:10687-10706 Msa1341950:intergenic 40.0%
AGCATCTACAACTATTGCCA+TGG - tig0004987:10891-10910 Msa1341950:CDS 40.0%
AGCTGCATGATACTTAGTGT+AGG + tig0004987:11181-11200 Msa1341950:intergenic 40.0%
TTAAGCATACACACAGCGTA+TGG + tig0004987:11267-11286 Msa1341950:intergenic 40.0%
CATTTCCTCAAGCAACAAGA+TGG + tig0004987:11492-11511 Msa1341950:intergenic 40.0%
ATGGCATTGTTATCTGTGGA+AGG - tig0004987:11720-11739 Msa1341950:intron 40.0%
TGGCATTGTTATCTGTGGAA+GGG - tig0004987:11721-11740 Msa1341950:intron 40.0%
CTGTATTATCTGCTGCAACT+TGG - tig0004987:11763-11782 Msa1341950:intron 40.0%
CTTGCAAATAACACTAACGG+TGG - tig0004987:11999-12018 Msa1341950:intron 40.0%
TTGTTTGAGGAGCTAACTTC+TGG - tig0004987:12224-12243 Msa1341950:intron 40.0%
!! GTCGGGTTGATTGAAATACT+TGG - tig0004987:12473-12492 Msa1341950:CDS 40.0%
! GACGTTTAGAGCATATACGA+CGG - tig0004987:12541-12560 Msa1341950:CDS 40.0%
! TTTAGAGCATATACGACGGA+TGG - tig0004987:12545-12564 Msa1341950:CDS 40.0%
CTACTTAGGAACCCAAATAG+GGG + tig0004987:12575-12594 Msa1341950:intergenic 40.0%
CCTACTTAGGAACCCAAATA+GGG + tig0004987:12576-12595 Msa1341950:intergenic 40.0%
ACCTACTTAGGAACCCAAAT+AGG + tig0004987:12577-12596 Msa1341950:intergenic 40.0%
TGTGCATGTATGACCTACTT+AGG + tig0004987:12589-12608 Msa1341950:intergenic 40.0%
AAAGTTCACTCGACAATTGG+GGG - tig0004987:12823-12842 Msa1341950:intron 40.0%
! TGGAATTTGTTTGGTCAGCT+TGG - tig0004987:12982-13001 Msa1341950:intron 40.0%
! GGAATTTGTTTGGTCAGCTT+GGG - tig0004987:12983-13002 Msa1341950:intron 40.0%
CAGTCTGACCTAGAAACATA+AGG - tig0004987:13050-13069 Msa1341950:intron 40.0%
GTTATCTATTAGCACACACG+AGG - tig0004987:13124-13143 Msa1341950:intron 40.0%
GTGAGCTAAATGCTTAGCTT+TGG - tig0004987:13160-13179 Msa1341950:intron 40.0%
TATTAGACGTTGTGTGGAAG+TGG + tig0004987:13465-13484 Msa1341950:intergenic 40.0%
CAACGTCTAATAAATTGCGG+CGG - tig0004987:13473-13492 Msa1341950:CDS 40.0%
ACTTGTAACAGCGTTCATCT+AGG + tig0004987:13501-13520 Msa1341950:intergenic 40.0%
TTCCTGCATAATGGTGTGTA+TGG - tig0004987:14088-14107 Msa1341950:CDS 40.0%
GAAAACCATCTGTAGTTGTC+TGG - tig0004987:14198-14217 Msa1341950:CDS 40.0%
AAAAGCCAGACAACTACAGA+TGG + tig0004987:14206-14225 Msa1341950:intergenic 40.0%
TTGTCATACGAGATGTCTAG+AGG - tig0004987:14230-14249 Msa1341950:CDS 40.0%
CAAATAATCCACGGATTCTG+TGG + tig0004987:14265-14284 Msa1341950:intergenic 40.0%
CTGCCCTTTCAAATAATCCA+CGG + tig0004987:14274-14293 Msa1341950:intergenic 40.0%
TAAATACAAGTCCTCACCAG+GGG + tig0004987:14418-14437 Msa1341950:intergenic 40.0%
CCCAAAGCTTCAAAGCTATA+AGG - tig0004987:14454-14473 Msa1341950:intron 40.0%
!! CCCTTATAGCTTTGAAGCTT+TGG + tig0004987:14458-14477 Msa1341950:intergenic 40.0%
AAGCTTCAAAGCTATAAGGG+AGG - tig0004987:14458-14477 Msa1341950:intron 40.0%
ATGTGTGTACCAGGTCAAAA+CGG - tig0004987:14562-14581 Msa1341950:intron 40.0%
AAGGTCATGACTCTTGCAAA+AGG + tig0004987:14704-14723 Msa1341950:intergenic 40.0%
CCAAGAGCAGATCAATAAGT+CGG + tig0004987:14740-14759 Msa1341950:intergenic 40.0%
ACATCAGTTCGCATCATATC+AGG + tig0004987:14763-14782 Msa1341950:intergenic 40.0%
TCAAGTTTACAACCATGCTC+TGG - tig0004987:14846-14865 Msa1341950:intron 40.0%
GGAAAGAAAAAGCAAGCATC+TGG - tig0004987:14986-15005 Msa1341950:CDS 40.0%
CAGCCATGTGAATATCTGAT+AGG - tig0004987:15174-15193 Msa1341950:CDS 40.0%
GCTCCTATCAGATATTCACA+TGG + tig0004987:15180-15199 Msa1341950:intergenic 40.0%
AATATCTGATAGGAGCAGAG+TGG - tig0004987:15184-15203 Msa1341950:CDS 40.0%
GTGTGCTATGAAATGATGAC+AGG - tig0004987:15212-15231 Msa1341950:CDS 40.0%
!! ACATTTGATTTGTGGGGTCT+AGG + tig0004987:15315-15334 Msa1341950:intergenic 40.0%
AGGGATTATACGGTTTGTGC+CGG + tig0004987:7661-7680 None:intergenic 45.0%
TGTCGCCCAGACATATTCAA+GGG + tig0004987:7680-7699 Msa1341950:intergenic 45.0%
ATGTCGCCCAGACATATTCA+AGG + tig0004987:7681-7700 Msa1341950:intergenic 45.0%
ATGTCTGGGCGACATGTTAA+AGG - tig0004987:7686-7705 Msa1341950:three_prime_UTR 45.0%
!! TGTCAGTTTGTTGAACTCCC+TGG + tig0004987:8011-8030 Msa1341950:intergenic 45.0%
GGGAGTTCAACAAACTGACA+AGG - tig0004987:8011-8030 Msa1341950:intron 45.0%
GAGTTCCAAGATAAGGTTGC+AGG - tig0004987:8073-8092 Msa1341950:intron 45.0%
GCATTCCTGCAACCTTATCT+TGG + tig0004987:8081-8100 Msa1341950:intergenic 45.0%
CTCCAAGTTCAAGGTTTCCA+TGG - tig0004987:8329-8348 Msa1341950:intron 45.0%
GGATGCTCAGATCACTAACT+TGG - tig0004987:8513-8532 Msa1341950:CDS 45.0%
TGCTGAACAATTGCAGGATC+CGG + tig0004987:8855-8874 Msa1341950:intergenic 45.0%
TCTTTGCAGATTTGAGTGGC+AGG - tig0004987:8905-8924 Msa1341950:CDS 45.0%
TGGAGAAAGAGGAGGAAACT+AGG - tig0004987:9099-9118 Msa1341950:intron 45.0%
TCACATGAAAATGAAGGCGG+AGG - tig0004987:9146-9165 Msa1341950:intron 45.0%
ATGAAAATGAAGGCGGAGGT+TGG - tig0004987:9150-9169 Msa1341950:intron 45.0%
GATATTAATGCTGGGGATGG+GGG - tig0004987:9335-9354 Msa1341950:intron 45.0%
ATCAGTGGATGCCTATTCGA+AGG - tig0004987:9420-9439 Msa1341950:intron 45.0%
GAGTGCTTCACTAGTAGAAG+AGG + tig0004987:9615-9634 Msa1341950:intergenic 45.0%
! TGAAGCACTCGAAACAGAAG+AGG - tig0004987:9625-9644 Msa1341950:intron 45.0%
! TCGAGCCTCTTTTGTGTTCA+GGG + tig0004987:9705-9724 Msa1341950:intergenic 45.0%
!! TGTCCTTCTTTGTTGGCTTC+TGG - tig0004987:9935-9954 Msa1341950:intron 45.0%
AAGCCAGAAGCCAACAAAGA+AGG + tig0004987:9941-9960 Msa1341950:intergenic 45.0%
!! GGTTCATGGTGTTATGTGGA+TGG + tig0004987:10087-10106 Msa1341950:intergenic 45.0%
AGTGTGTTCTCTGTCCAAGT+AGG + tig0004987:10483-10502 Msa1341950:intergenic 45.0%
GACAGAGAACACACTTAGCT+TGG - tig0004987:10488-10507 Msa1341950:intron 45.0%
! AGAGAACACACTTAGCTTGG+AGG - tig0004987:10491-10510 Msa1341950:intron 45.0%
GAGCAAGAAAGTAGAGAGAG+GGG + tig0004987:10828-10847 Msa1341950:intergenic 45.0%
GGAGCAAGAAAGTAGAGAGA+GGG + tig0004987:10829-10848 Msa1341950:intergenic 45.0%
AGGAGCAAGAAAGTAGAGAG+AGG + tig0004987:10830-10849 Msa1341950:intergenic 45.0%
! ACAGGTGCTATGCTAAGCTA+CGG - tig0004987:11151-11170 Msa1341950:CDS 45.0%
TGGTGTATATGCACGAAGAG+AGG - tig0004987:11656-11675 Msa1341950:intron 45.0%
AATACAGTACATACCTCGGG+AGG + tig0004987:11750-11769 Msa1341950:intergenic 45.0%
AACTGCTTAGAGCACGTCAA+GGG - tig0004987:12114-12133 Msa1341950:intron 45.0%
AAATGACCAATCTGTCGCTC+TGG - tig0004987:12187-12206 Msa1341950:intron 45.0%
AACATACCAGAGCGACAGAT+TGG + tig0004987:12196-12215 Msa1341950:intergenic 45.0%
GCTAACTTCTGGATGTGATG+CGG - tig0004987:12235-12254 Msa1341950:intron 45.0%
CTAACTTCTGGATGTGATGC+GGG - tig0004987:12236-12255 Msa1341950:intron 45.0%
!!! TGATGCGGGCATTGAAGTTT+TGG - tig0004987:12250-12269 Msa1341950:intron 45.0%
! GCTTTTACTATGGTGCTTCC+AGG - tig0004987:12278-12297 Msa1341950:intron 45.0%
! CCCTATTTGGGTTCCTAAGT+AGG - tig0004987:12573-12592 Msa1341950:CDS 45.0%
AGCCTACAAAAGGAAGCAAG+AGG - tig0004987:12766-12785 Msa1341950:intron 45.0%
GCCTACAAAAGGAAGCAAGA+GGG - tig0004987:12767-12786 Msa1341950:intron 45.0%
! ACCCTCTTGCTTCCTTTTGT+AGG + tig0004987:12771-12790 Msa1341950:intergenic 45.0%
AGTTTGGGAATCCGTTTCTC+AGG - tig0004987:13384-13403 Msa1341950:CDS 45.0%
GTTTGGGAATCCGTTTCTCA+GGG - tig0004987:13385-13404 Msa1341950:CDS 45.0%
TGCCATACACACCATTATGC+AGG + tig0004987:14093-14112 Msa1341950:intergenic 45.0%
TCATACGAGATGTCTAGAGG+TGG - tig0004987:14233-14252 Msa1341950:CDS 45.0%
TTTGCAGCTCAGTTGTACTG+TGG - tig0004987:14309-14328 Msa1341950:intron 45.0%
TACTGTGGCGTTGCTACATT+GGG - tig0004987:14324-14343 Msa1341950:intron 45.0%
AAAATACGTCGAGCTGCAGA+AGG + tig0004987:14374-14393 Msa1341950:intergenic 45.0%
TCAAAACGGCTATGGTTGGA+TGG - tig0004987:14576-14595 Msa1341950:intron 45.0%
AGTCGGATTCTCGACAACAA+AGG + tig0004987:14723-14742 Msa1341950:intergenic 45.0%
CCGACTTATTGATCTGCTCT+TGG - tig0004987:14737-14756 Msa1341950:CDS 45.0%
AACATATTGTGTCGCCCATC+CGG - tig0004987:15257-15276 Msa1341950:CDS 45.0%
!!! CTTTTATTATTTATTTTTTT+TGG - tig0004987:12446-12465 Msa1341950:CDS 5.0%
GGGATTATACGGTTTGTGCC+GGG + tig0004987:7660-7679 None:intergenic 50.0%
GGTTCACTTGGGGAAAGAGA+TGG - tig0004987:7731-7750 Msa1341950:three_prime_UTR 50.0%
TGCTCTGTGAGTAGCAAAGG+AGG + tig0004987:8993-9012 Msa1341950:intergenic 50.0%
CTCTGCTCTGTGAGTAGCAA+AGG + tig0004987:8996-9015 Msa1341950:intergenic 50.0%
GTGCTAGAGTCGGAGAAGAA+GGG - tig0004987:9054-9073 Msa1341950:intron 50.0%
TGCTAGAGTCGGAGAAGAAG+GGG - tig0004987:9055-9074 Msa1341950:intron 50.0%
GTCCACATGGTTGGAGAAAG+AGG - tig0004987:9088-9107 Msa1341950:intron 50.0%
CTCCTCTTTCTCCAACCATG+TGG + tig0004987:9093-9112 Msa1341950:intergenic 50.0%
CACATGGTTGGAGAAAGAGG+AGG - tig0004987:9091-9110 Msa1341950:intron 50.0%
TAGGCAACGAGTCGTCAAAG+AGG - tig0004987:9118-9137 Msa1341950:intron 50.0%
! GTCGAGCCTCTTTTGTGTTC+AGG + tig0004987:9706-9725 Msa1341950:intergenic 50.0%
! GTGGCTCTGTCCTTCTTTGT+TGG - tig0004987:9928-9947 Msa1341950:intron 50.0%
GACTTTGCCAAAGCTCGACA+TGG + tig0004987:10774-10793 Msa1341950:intergenic 50.0%
! CAGGTGCTATGCTAAGCTAC+GGG - tig0004987:11152-11171 Msa1341950:CDS 50.0%
! GGAAGCCATCTTGTTGCTTG+AGG - tig0004987:11484-11503 Msa1341950:CDS 50.0%
GCACGAAGAGAGGCTGATTA+TGG - tig0004987:11666-11685 Msa1341950:intron 50.0%
CAACTGCTTAGAGCACGTCA+AGG - tig0004987:12113-12132 Msa1341950:intron 50.0%
!! TATAGAGAAGGGTGCCTGGA+AGG + tig0004987:12794-12813 Msa1341950:intergenic 50.0%
!! TGCTTATAGAGAAGGGTGCC+TGG + tig0004987:12798-12817 Msa1341950:intergenic 50.0%
!! CAGAGGCATCAGAAGCAATC+AGG - tig0004987:13352-13371 Msa1341950:intron 50.0%
GACTGAAGGGATATAGCTGG+AGG + tig0004987:13411-13430 Msa1341950:intergenic 50.0%
CTGGACTGAAGGGATATAGC+TGG + tig0004987:13414-13433 Msa1341950:intergenic 50.0%
GTACTGTGGCGTTGCTACAT+TGG - tig0004987:14323-14342 Msa1341950:intron 50.0%
GTACCAGGTCAAAACGGCTA+TGG - tig0004987:14568-14587 Msa1341950:intron 50.0%
!! CAACCATAGCCGTTTTGACC+TGG + tig0004987:14574-14593 Msa1341950:intergenic 50.0%
CAGGTCAAAACGGCTATGGT+TGG - tig0004987:14572-14591 Msa1341950:intron 50.0%
ATCTGATAGGAGCAGAGTGG+TGG - tig0004987:15187-15206 Msa1341950:CDS 50.0%
TCTGATAGGAGCAGAGTGGT+GGG - tig0004987:15188-15207 Msa1341950:CDS 50.0%
GTCTAGGTTAGCGCACAGAT+TGG + tig0004987:15299-15318 Msa1341950:intergenic 50.0%
TGAAGTCTGCTGGGCGATAC+TGG - tig0004987:7780-7799 Msa1341950:three_prime_UTR 55.0%
GCAGGAATGCAACGGCAGAA+AGG - tig0004987:8091-8110 Msa1341950:intron 55.0%
CTTCAGGCAGCAAGCACTCT+AGG - tig0004987:8391-8410 Msa1341950:three_prime_UTR 55.0%
TGCAGATTTGAGTGGCAGGC+TGG - tig0004987:8909-8928 Msa1341950:CDS 55.0%
GGTGCTAGAGTCGGAGAAGA+AGG - tig0004987:9053-9072 Msa1341950:intron 55.0%
! TCTCGGTTGGTCCACATGGT+TGG - tig0004987:9079-9098 Msa1341950:intron 55.0%
! AATGAAGGCGGAGGTTGGTC+TGG - tig0004987:9155-9174 Msa1341950:intron 55.0%
AGAGTCTGATGTGCTACCGC+TGG - tig0004987:9831-9850 Msa1341950:CDS 55.0%
GGTTACGCCATGTCGAGCTT+TGG - tig0004987:10764-10783 Msa1341950:intron 55.0%
ACGGATGGAGCTCCCCTATT+TGG - tig0004987:12560-12579 Msa1341950:CDS 55.0%
CGGATGGAGCTCCCCTATTT+GGG - tig0004987:12561-12580 Msa1341950:CDS 55.0%
! TCGACAATTGGGGGTGTGTG+TGG - tig0004987:12832-12851 Msa1341950:intron 55.0%
! CGACAATTGGGGGTGTGTGT+GGG - tig0004987:12833-12852 Msa1341950:intron 55.0%
! GACAATTGGGGGTGTGTGTG+GGG - tig0004987:12834-12853 Msa1341950:intron 55.0%
! ACAATTGGGGGTGTGTGTGG+GGG - tig0004987:12835-12854 Msa1341950:intron 55.0%
TAGCTGGAGGCCCTGAGAAA+CGG + tig0004987:13398-13417 Msa1341950:intergenic 55.0%
GGCTCAATCCACAGAATCCG+TGG - tig0004987:14254-14273 Msa1341950:CDS 55.0%
TCTGCTGGGCGATACTGGTC+CGG - tig0004987:7785-7804 Msa1341950:three_prime_UTR 60.0%
AGGCAGCAAGCACTCTAGGC+AGG - tig0004987:8395-8414 Msa1341950:three_prime_UTR 60.0%
GTCGGAGAAGAAGGGGCTCT+CGG - tig0004987:9062-9081 Msa1341950:intron 60.0%
GAGAAGAAGGGGCTCTCGGT+TGG - tig0004987:9066-9085 Msa1341950:intron 60.0%
!! AAGGCGGAGGTTGGTCTGGT+TGG - tig0004987:9159-9178 Msa1341950:intron 60.0%
CTCGACATGGCGTAACCCCA+CGG + tig0004987:10761-10780 Msa1341950:intergenic 60.0%
GGAAGCAAGAGGGTCCTTCC+AGG - tig0004987:12777-12796 Msa1341950:intron 60.0%
GTGCTATCCATGCTTGCCCC+TGG - tig0004987:14399-14418 Msa1341950:intron 60.0%
ATCCATGCTTGCCCCTGGTG+AGG - tig0004987:14404-14423 Msa1341950:intron 60.0%
CCGTAACCCAGCTTCCGGAT+GGG + tig0004987:15274-15293 Msa1341950:intergenic 60.0%
CCCATCCGGAAGCTGGGTTA+CGG - tig0004987:15271-15290 Msa1341950:CDS 60.0%
ACCGTAACCCAGCTTCCGGA+TGG + tig0004987:15275-15294 Msa1341950:intergenic 60.0%
TGGCACCGTAACCCAGCTTC+CGG + tig0004987:15279-15298 Msa1341950:intergenic 60.0%
! GGGCTCTCGGTTGGTCCACA+TGG - tig0004987:9075-9094 Msa1341950:intron 65.0%
TGTGGAAGGGCTTCCTCCCG+AGG - tig0004987:11734-11753 Msa1341950:intron 65.0%
! ATTGGGGGTGTGTGTGGGGG+TGG - tig0004987:12838-12857 Msa1341950:intron 65.0%
! TTGGGGGTGTGTGTGGGGGT+GGG - tig0004987:12839-12858 Msa1341950:intron 65.0%
GTCCTCACCAGGGGCAAGCA+TGG + tig0004987:14409-14428 Msa1341950:intergenic 65.0%
TGTGTCGCCCATCCGGAAGC+TGG - tig0004987:15264-15283 Msa1341950:CDS 65.0%
GTGTCGCCCATCCGGAAGCT+GGG - tig0004987:15265-15284 Msa1341950:CDS 65.0%
! TGGGGGTGTGTGTGGGGGTG+GGG - tig0004987:12840-12859 Msa1341950:intron 70.0%
TGTGTGTGGGGGTGGGGGGT+GGG - tig0004987:12846-12865 Msa1341950:intron 70.0%
! GGGGGTGTGTGTGGGGGTGG+GGG - tig0004987:12841-12860 Msa1341950:intron 75.0%
GGGGTGTGTGTGGGGGTGGG+GGG - tig0004987:12842-12861 Msa1341950:intron 75.0%
GTGTGTGTGGGGGTGGGGGG+TGG - tig0004987:12845-12864 Msa1341950:intron 75.0%
GTGTGTGGGGGTGGGGGGTG+GGG - tig0004987:12847-12866 Msa1341950:intron 75.0%
TGTGTGGGGGTGGGGGGTGG+GGG - tig0004987:12848-12867 Msa1341950:intron 75.0%
! GTGTGGGGGTGGGGGGTGGG+GGG - tig0004987:12849-12868 Msa1341950:intron 80.0%
! TGTGGGGGTGGGGGGTGGGG+GGG - tig0004987:12850-12869 Msa1341950:intron 80.0%
! GTGGGGGTGGGGGGTGGGGG+GGG - tig0004987:12851-12870 Msa1341950:intron 85.0%
! TGGGGGTGGGGGGTGGGGGG+GGG - tig0004987:12852-12871 Msa1341950:intron 85.0%
! GGGGGTGGGGGGTGGGGGGG+GGG - tig0004987:12853-12872 Msa1341950:intron 90.0%
! GGGGTGGGGGGTGGGGGGGG+GGG - tig0004987:12854-12873 Msa1341950:intron 90.0%
! GGGTGGGGGGTGGGGGGGGG+GGG - tig0004987:12855-12874 Msa1341950:intron 90.0%
! GGTGGGGGGTGGGGGGGGGG+GGG - tig0004987:12856-12875 Msa1341950:intron 90.0%
! GTGGGGGGTGGGGGGGGGGG+GGG - tig0004987:12857-12876 Msa1341950:intron 90.0%
! TGGGGGGTGGGGGGGGGGGG+GGG - tig0004987:12858-12877 Msa1341950:intron 90.0%
! GGGGGGTGGGGGGGGGGGGG+GGG - tig0004987:12859-12878 Msa1341950:intron 95.0%
! GGGGGTGGGGGGGGGGGGGG+GGG - tig0004987:12860-12879 Msa1341950:intron 95.0%
! GGGGTGGGGGGGGGGGGGGG+GGG - tig0004987:12861-12880 Msa1341950:intron 95.0%
! GGGTGGGGGGGGGGGGGGGG+GGG - tig0004987:12862-12881 Msa1341950:intron 95.0%
! GGTGGGGGGGGGGGGGGGGG+GGG - tig0004987:12863-12882 Msa1341950:intron 95.0%
! GTGGGGGGGGGGGGGGGGGG+GGG - tig0004987:12864-12883 Msa1341950:intron 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG - tig0004987:12865-12884 Msa1341950:intron 95.0%
Chromosome Type Strat End Strand Name
tig0004987 gene 7646 15506 7646 ID=Msa1341950;Name=Msa1341950
tig0004987 mRNA 7646 15506 7646 ID=Msa1341950-mRNA-1;Parent=Msa1341950;Name=Msa1341950-mRNA-1;_AED=0.15;_eAED=0.15;_QI=1|0.9|0.81|1|0.9|0.81|11|406|963
tig0004987 exon 7646 7990 7646 ID=Msa1341950-mRNA-1:exon:3416;Parent=Msa1341950-mRNA-1
tig0004987 exon 8372 8577 8372 ID=Msa1341950-mRNA-1:exon:3415;Parent=Msa1341950-mRNA-1
tig0004987 exon 8732 8953 8732 ID=Msa1341950-mRNA-1:exon:3414;Parent=Msa1341950-mRNA-1
tig0004987 exon 9634 9859 9634 ID=Msa1341950-mRNA-1:exon:3413;Parent=Msa1341950-mRNA-1
tig0004987 exon 10853 11204 10853 ID=Msa1341950-mRNA-1:exon:3412;Parent=Msa1341950-mRNA-1
tig0004987 exon 11397 11510 11397 ID=Msa1341950-mRNA-1:exon:3411;Parent=Msa1341950-mRNA-1
tig0004987 exon 12337 12688 12337 ID=Msa1341950-mRNA-1:exon:3410;Parent=Msa1341950-mRNA-1
tig0004987 exon 13375 13546 13375 ID=Msa1341950-mRNA-1:exon:3409;Parent=Msa1341950-mRNA-1
tig0004987 exon 13703 14324 13703 ID=Msa1341950-mRNA-1:exon:3408;Parent=Msa1341950-mRNA-1
tig0004987 exon 14736 14831 14736 ID=Msa1341950-mRNA-1:exon:3407;Parent=Msa1341950-mRNA-1
tig0004987 exon 14915 15506 14915 ID=Msa1341950-mRNA-1:exon:3406;Parent=Msa1341950-mRNA-1
tig0004987 five_prime_UTR 15506 15506 15506 ID=Msa1341950-mRNA-1:five_prime_utr;Parent=Msa1341950-mRNA-1
tig0004987 CDS 14915 15505 14915 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 CDS 14736 14831 14736 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 CDS 13703 14324 13703 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 CDS 13375 13546 13375 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 CDS 12337 12688 12337 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 CDS 11397 11510 11397 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 CDS 10853 11204 10853 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 CDS 9634 9859 9634 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 CDS 8732 8953 8732 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 CDS 8433 8577 8433 ID=Msa1341950-mRNA-1:cds;Parent=Msa1341950-mRNA-1
tig0004987 three_prime_UTR 8372 8432 8372 ID=Msa1341950-mRNA-1:three_prime_utr;Parent=Msa1341950-mRNA-1
tig0004987 three_prime_UTR 7646 7990 7646 ID=Msa1341950-mRNA-1:three_prime_utr;Parent=Msa1341950-mRNA-1
Gene Sequence

>Msa1341950

ATGGATATTGCCCGGCACAAACCGTATAATCCCTTGAATATGTCTGGGCGACATGTTAAAGGTTTGTATTGGTGGAATCAAAGTGGTTCACTTGGGGAAAGAGATGGCGATATTGATGCTTTGGATGATAAAATGAAGTCTGCTGGGCGATACTGGTCCGGAAAGTATATGGCTTTAGAACGACATAAAAGCTTCAAGCGCCTACGTCTTGTTGCTCCAAAATTGTCACCTCATACAACACAAGATGAGTTTATACCTTTATCAGATGTTGGTACATCTCAAGGAGCTGTTGACAGTGAATCCGACTCTAAAATTTCATCATCACTTGAAGAATCTTGGGAAGATGAAATGTTAAATAAAACCAGGGAGTTCAACAAACTGACAAGGGAGAACCCGCATGATGAAATAGTTTGGTTACATTTTGCCGAGTTCCAAGATAAGGTTGCAGGAATGCAACGGCAGAAAGGTGCTCGCTTGCAAATACTTGAAAAGAAAATTAGCATTCTGGAGAAGGCAGTTGAGCTTAACCCAGAGAATGAAAATCTATTACTTTGCCTTTTAAAAGCTTATCAAACAAGAGATAGCTCAGATAGGAATTTCTCCAAGTTCAAGGTTTCCATGGTTAGGAAGATGTATGCTTATGCTATTGAAGCTTTGTCTGCTTCAGGCAGCAAGCACTCTAGGCAGGCTCTTCAAGCTGATGATTCTTCACCGGATCCTGCAATTGTTCAGCAAGAACTTCGTCTTGTAGATATATTTCTCAGTCTTTGCAGATTTGAGTGGCAGGCTGGTTATAGAGAAGTTGCCACTGCTTTATTTCAGGCTGAAATTGAGTTTAGTTTATTTTGTCCTCCTTTGCTACTCACAGAGCAGAGTAAGCAACGACTGTTTGAGCATTTTTGGAATAGTCATGGTGCTAGAGTCGGAGAAGAAGGGGCTCTCGGTTGGTCCACATGGTTGGAGAAAGAGGAGGAAACTAGGCAACGAGTCGTCAAAGAGGAGCTCTCACATGAAAATGAAGGCGGAGGTTGGTCTGGTTGGTCAGAACCTTTGTCTAAAGATAAGGAGGGTACGGCCAATTTTGAAAATGAAACTGACATTGATTTGGTTATGGAGGATAATCAAGATGAGGATGAATATAAAGATGTTGAGCCTGAAGATGATACTGAGAATTTGCTAAAGCTGCTGGGAATTGATATTAATGCTGGGGATGGGGGAGAAGTTAATGACACTTTGACCTGGATCAAATGGTCAGAAGAAGAGTCTTCTAGAGATTGTGATCAGTGGATGCCTATTCGAAGGAAGTTAGATACAACCTCTTCTACTAGTGAAGCACTCGAAACAGAAGAGGATGAGAAACTCTCGAGAATCATATTGTATGAAGATGTAAGCGAATACCTTTTCACCCTGAACACAAAAGAGGCTCGACTATATTTGGTGTCCCAATTCATTGACTTCTATGGTGGGAAGACGTCTCAATTGTTTTCAACAAACAGTCCTACTTGGACAGAGAACACACTTAGCTTGGAGGATCTGCCAGATTCTATGTTAGAGAAGTTGAAATGCATCCATAACGTTTTGACAAAAGCACAAAGCATTCCTACTAGTTTCACTTTAGATTTTCTATTAGGAAGTTCCATGAGGAATGCTGATATGATGAAATTCGTACGGAATGCAGTCTTACTTTGCTTAACTGTTTTTCCACGTAATCACGTTTTGGAAGAAGCAGTTCTTATTTGTGAAGAGCTTTTTGTTACTAAAATGAATTCTTCTAACCGTGGGGTTACGCCATGTCGAGCTTTGGCAAAGTCTCTCTTAAAAAGTGATAGACAGGATGTTTTGTTGTGTGGTGTATATGCACGAAGAGAGGCTGATTATGGCAATATTGATCTTGCAAGAAAGGTGTTTGATATGGCATTGTTATCTGTGGAAGGGCTTCCTCCCGAGGAGATTCAGTCCAATGCACCTCTTCTATATTTATGGTATGCTGAAGTGGAGCTTGCAAATAACACTAACGGTGGTCGTGAATCTTCATATCGTGCGATACATATATTGTCTTGCTTAGGAAATGGTACAAAATACACCCCATTTAAAAGTCAAGCATCAAGTTTGCAACTGCTTAGAGCACGTCAAGGGTTTAAAGAAAAACTGAGAACAGTATTATCATCTTGGTTTCGTGGTATAATAAATGACCAATCTGTCGCTCTGGTATGTTCTGCTTCATTGTTTGAGGAGCTAACTTCTGGATGTGATGCGGGCATTGAAGTTTTGGATCAAGCTTTTACTATGGTGCTTCCAGAAAGGAGAAGCCATAGCTATCAACTTGAATTTTTGTTTAACTATTACATAAGGATGCTTCAGAGGCATCAGAAGCAATCAGGTCTGATGAAAGTTTGGGAATCCGTTTCTCAGGGCCTCCAGCTATATCCCTTCAGTCCAGAACTTTTAAAAGGTGTAGTGGAAGTTGGCCACTTCCACACAACGTCTAATAAATTGCGGCGGATCCTAGATGAACGCTGTTACAAAAAACCATCTGTAGTTGTCTGGCTTTTTGCATTGTCATACGAGATGTCTAGAGGTGGCTCAATCCACAGAATCCGTGGATTATTTGAAAGGGCAGTGAGTAATCATATGCTTTGCAGCTCAGTTGTACTGTGGCGTTGCTACATTGGGTATGAATTGAACATTGCACATGATCCTTCTGCAGCTCGACGTATTTTCTTTCGTGCTATCCATGCTTGCCCCTGGTCAAAACGGCTATGGTTGGATGGATTTCTCAAACTGAACTCTGTTCTTACTGGAAAAGAGCTTTCTGATCTACAAGAAGTAATGCGTGATAAAGAACTAAATCTAAGAACTGACATTTATGAGATCCTTTTGCAAGAGTCATGA

Protein sequence

>Msa1341950

MDIARHKPYNPLNMSGRHVKGLYWWNQSGSLGERDGDIDALDDKMKSAGRYWSGKYMALERHKSFKRLRLVAPKLSPHTTQDEFIPLSDVGTSQGAVDSESDSKISSSLEESWEDEMLNKTREFNKLTRENPHDEIVWLHFAEFQDKVAGMQRQKGARLQILEKKISILEKAVELNPENENLLLCLLKAYQTRDSSDRNFSKFKVSMVRKMYAYAIEALSASGSKHSRQALQADDSSPDPAIVQQELRLVDIFLSLCRFEWQAGYREVATALFQAEIEFSLFCPPLLLTEQSKQRLFEHFWNSHGARVGEEGALGWSTWLEKEEETRQRVVKEELSHENEGGGWSGWSEPLSKDKEGTANFENETDIDLVMEDNQDEDEYKDVEPEDDTENLLKLLGIDINAGDGGEVNDTLTWIKWSEEESSRDCDQWMPIRRKLDTTSSTSEALETEEDEKLSRIILYEDVSEYLFTLNTKEARLYLVSQFIDFYGGKTSQLFSTNSPTWTENTLSLEDLPDSMLEKLKCIHNVLTKAQSIPTSFTLDFLLGSSMRNADMMKFVRNAVLLCLTVFPRNHVLEEAVLICEELFVTKMNSSNRGVTPCRALAKSLLKSDRQDVLLCGVYARREADYGNIDLARKVFDMALLSVEGLPPEEIQSNAPLLYLWYAEVELANNTNGGRESSYRAIHILSCLGNGTKYTPFKSQASSLQLLRARQGFKEKLRTVLSSWFRGIINDQSVALVCSASLFEELTSGCDAGIEVLDQAFTMVLPERRSHSYQLEFLFNYYIRMLQRHQKQSGLMKVWESVSQGLQLYPFSPELLKGVVEVGHFHTTSNKLRRILDERCYKKPSVVVWLFALSYEMSRGGSIHRIRGLFERAVSNHMLCSSVVLWRCYIGYELNIAHDPSAARRIFFRAIHACPWSKRLWLDGFLKLNSVLTGKELSDLQEVMRDKELNLRTDIYEILLQES*