Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367400 | QKK82849.1 | 100.000 | 188 | 0 | 0 | 1 | 188 | 1 | 188 | 1.32e-135 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367400 | sp|Q8W171|CYP1_SOYBN | 85.380 | 171 | 25 | 0 | 8 | 178 | 2 | 172 | 1.30e-108 | 310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367400 | A0A7G3TMU8 | 100.000 | 188 | 0 | 0 | 1 | 188 | 1 | 188 | 6.29e-136 | 387 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa1367400 | 0.829453 | 5.104113e-55 | -8.615850e-47 |
| Msa0002110 | Msa1367400 | 0.808763 | 2.639887e-50 | -8.615850e-47 |
| Msa0027020 | Msa1367400 | 0.803602 | 3.224158e-49 | -8.615850e-47 |
| Msa0029520 | Msa1367400 | 0.808617 | 2.836633e-50 | -8.615850e-47 |
| Msa0035050 | Msa1367400 | 0.835585 | 1.539929e-56 | -8.615850e-47 |
| Msa0042950 | Msa1367400 | 0.819254 | 1.279068e-52 | -8.615850e-47 |
| Msa0046020 | Msa1367400 | 0.831266 | 1.840581e-55 | -8.615850e-47 |
| Msa0066890 | Msa1367400 | 0.812652 | 3.806523e-51 | -8.615850e-47 |
| Msa0067370 | Msa1367400 | 0.805862 | 1.087386e-49 | -8.615850e-47 |
| Msa0067590 | Msa1367400 | 0.822009 | 2.979699e-53 | -8.615850e-47 |
| Msa0093950 | Msa1367400 | 0.821838 | 3.262458e-53 | -8.615850e-47 |
| Msa0094170 | Msa1367400 | 0.804658 | 1.943359e-49 | -8.615850e-47 |
| Msa0095810 | Msa1367400 | 0.811311 | 7.461002e-51 | -8.615850e-47 |
| Msa0111110 | Msa1367400 | 0.808040 | 3.765282e-50 | -8.615850e-47 |
| Msa0112550 | Msa1367400 | 0.810500 | 1.117889e-50 | -8.615850e-47 |
| Msa0112880 | Msa1367400 | 0.813406 | 2.600813e-51 | -8.615850e-47 |
| Msa1355030 | Msa1367400 | 0.809401 | 1.926915e-50 | -8.615850e-47 |
| Msa1356100 | Msa1367400 | 0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa1361670 | Msa1367400 | 0.806871 | 6.664007e-50 | -8.615850e-47 |
| Msa1364350 | Msa1367400 | 0.850091 | 2.124986e-60 | -8.615850e-47 |
| Msa1365030 | Msa1367400 | 0.994413 | 4.749747e-207 | -8.615850e-47 |
| Msa1367400 | Msa1367690 | 0.818278 | 2.130435e-52 | -8.615850e-47 |
| Msa1367400 | Msa1373420 | 0.831710 | 1.430493e-55 | -8.615850e-47 |
| Msa1367400 | Msa1375610 | 0.833176 | 6.197747e-56 | -8.615850e-47 |
| Msa1367400 | Msa1376550 | 0.828579 | 8.311713e-55 | -8.615850e-47 |
| Msa1367400 | Msa1382380 | 0.857858 | 1.225820e-62 | -8.615850e-47 |
| Msa1367400 | Msa1386910 | 0.826808 | 2.213460e-54 | -8.615850e-47 |
| Msa1367400 | Msa1388030 | 0.832768 | 7.828869e-56 | -8.615850e-47 |
| Msa1367400 | Msa1407160 | 0.839349 | 1.671159e-57 | -8.615850e-47 |
| Msa1367400 | Msa1408230 | 0.802328 | 5.909887e-49 | -8.615850e-47 |
| Msa1367400 | Msa1410480 | 0.817948 | 2.530183e-52 | -8.615850e-47 |
| Msa1367400 | Msa1410500 | 0.807385 | 5.187253e-50 | -8.615850e-47 |
| Msa1367400 | Msa1415510 | 0.816867 | 4.430772e-52 | -8.615850e-47 |
| Msa1367400 | Msa1424490 | 0.822150 | 2.763403e-53 | -8.615850e-47 |
| Msa1367400 | Msa1431510 | 0.807312 | 5.375561e-50 | -8.615850e-47 |
| Msa1367400 | Msa1432100 | 0.806167 | 9.382003e-50 | -8.615850e-47 |
| Msa1367400 | Msa1434860 | 0.803516 | 3.358747e-49 | -8.615850e-47 |
| Msa1367400 | Msa1440140 | 0.813562 | 2.403384e-51 | -8.615850e-47 |
| Msa1367400 | Msa1444130 | 0.811780 | 5.897950e-51 | -8.615850e-47 |
| Msa1367400 | Msa1444690 | 0.804089 | 2.553690e-49 | -8.615850e-47 |
| Msa1367400 | Msa1444770 | 0.810571 | 1.078950e-50 | -8.615850e-47 |
| Msa1367400 | Msa1457390 | 0.809550 | 1.790285e-50 | -8.615850e-47 |
| Msa1367400 | Msa1461840 | 0.810698 | 1.013027e-50 | -8.615850e-47 |
| Msa1367400 | Msa1462680 | 0.999729 | 0.000000e+00 | -8.615850e-47 |
| Msa0603690 | Msa1367400 | 0.816983 | 4.173163e-52 | -8.615850e-47 |
| Msa0605040 | Msa1367400 | 0.814875 | 1.232942e-51 | -8.615850e-47 |
| Msa0605160 | Msa1367400 | 0.816801 | 4.586246e-52 | -8.615850e-47 |
| Msa0606340 | Msa1367400 | 0.813544 | 2.426202e-51 | -8.615850e-47 |
| Msa0606350 | Msa1367400 | 0.806440 | 8.216414e-50 | -8.615850e-47 |
| Msa0606640 | Msa1367400 | 0.811803 | 5.831321e-51 | -8.615850e-47 |
| Msa0637930 | Msa1367400 | 0.855613 | 5.608138e-62 | -8.615850e-47 |
| Msa0638010 | Msa1367400 | 0.864571 | 1.105256e-64 | -8.615850e-47 |
| Msa0649160 | Msa1367400 | 0.820029 | 8.509204e-53 | -8.615850e-47 |
| Msa0660960 | Msa1367400 | 0.812178 | 4.830392e-51 | -8.615850e-47 |
| Msa0667670 | Msa1367400 | 0.817686 | 2.899270e-52 | -8.615850e-47 |
| Msa0676570 | Msa1367400 | 0.802275 | 6.059987e-49 | -8.615850e-47 |
| Msa0686950 | Msa1367400 | 0.824350 | 8.466277e-54 | -8.615850e-47 |
| Msa0690100 | Msa1367400 | 0.813200 | 2.887180e-51 | -8.615850e-47 |
| Msa0695250 | Msa1367400 | 0.818526 | 1.872041e-52 | -8.615850e-47 |
| Msa0751490 | Msa1367400 | 0.800861 | 1.181430e-48 | -8.615850e-47 |
| Msa0788450 | Msa1367400 | 0.875922 | 2.102350e-68 | -8.615850e-47 |
| Msa0793130 | Msa1367400 | 0.832229 | 1.064913e-55 | -8.615850e-47 |
| Msa0820130 | Msa1367400 | 0.812590 | 3.927890e-51 | -8.615850e-47 |
| Msa0825570 | Msa1367400 | 0.876087 | 1.844837e-68 | -8.615850e-47 |
| Msa0826540 | Msa1367400 | 0.872345 | 3.415065e-67 | -8.615850e-47 |
| Msa0827520 | Msa1367400 | 0.824480 | 7.891819e-54 | -8.615850e-47 |
| Msa0829210 | Msa1367400 | 0.825279 | 5.112401e-54 | -8.615850e-47 |
| Msa0829250 | Msa1367400 | 0.801327 | 9.487997e-49 | -8.615850e-47 |
| Msa0833950 | Msa1367400 | 0.828156 | 1.051450e-54 | -8.615850e-47 |
| Msa0133140 | Msa1367400 | 0.800098 | 1.690346e-48 | -8.615850e-47 |
| Msa0136870 | Msa1367400 | 0.833948 | 3.976590e-56 | -8.615850e-47 |
| Msa0154880 | Msa1367400 | 0.811092 | 8.323882e-51 | -8.615850e-47 |
| Msa0154890 | Msa1367400 | 0.811617 | 6.402015e-51 | -8.615850e-47 |
| Msa0158890 | Msa1367400 | 0.800133 | 1.662665e-48 | -8.615850e-47 |
| Msa0167160 | Msa1367400 | 0.812937 | 3.297650e-51 | -8.615850e-47 |
| Msa0168770 | Msa1367400 | 0.829129 | 6.116212e-55 | -8.615850e-47 |
| Msa0178840 | Msa1367400 | 0.825296 | 5.065463e-54 | -8.615850e-47 |
| Msa0187590 | Msa1367400 | 0.857222 | 1.891125e-62 | -8.615850e-47 |
| Msa0220400 | Msa1367400 | 0.820262 | 7.528400e-53 | -8.615850e-47 |
| Msa0223830 | Msa1367400 | 0.812954 | 3.268439e-51 | -8.615850e-47 |
| Msa0225190 | Msa1367400 | 0.832486 | 9.196806e-56 | -8.615850e-47 |
| Msa0225280 | Msa1367400 | 0.802269 | 6.078103e-49 | -8.615850e-47 |
| Msa0225790 | Msa1367400 | 0.801906 | 7.217024e-49 | -8.615850e-47 |
| Msa0234410 | Msa1367400 | 0.814492 | 1.498955e-51 | -8.615850e-47 |
| Msa1235620 | Msa1367400 | 0.802637 | 5.104856e-49 | -8.615850e-47 |
| Msa1236120 | Msa1367400 | 0.816494 | 5.373941e-52 | -8.615850e-47 |
| Msa1251440 | Msa1367400 | 0.809828 | 1.559893e-50 | -8.615850e-47 |
| Msa1277270 | Msa1367400 | 0.822821 | 1.929648e-53 | -8.615850e-47 |
| Msa1279250 | Msa1367400 | 0.805813 | 1.113540e-49 | -8.615850e-47 |
| Msa1317290 | Msa1367400 | 0.804510 | 2.087164e-49 | -8.615850e-47 |
| Msa1333220 | Msa1367400 | 0.820012 | 8.586357e-53 | -8.615850e-47 |
| Msa1341850 | Msa1367400 | 0.810100 | 1.363256e-50 | -8.615850e-47 |
| Msa1342960 | Msa1367400 | 0.825483 | 4.572999e-54 | -8.615850e-47 |
| Msa0368450 | Msa1367400 | 0.825224 | 5.267411e-54 | -8.615850e-47 |
| Msa0378440 | Msa1367400 | 0.801658 | 8.115041e-49 | -8.615850e-47 |
| Msa0380400 | Msa1367400 | 0.826548 | 2.554409e-54 | -8.615850e-47 |
| Msa0380450 | Msa1367400 | 0.824282 | 8.783766e-54 | -8.615850e-47 |
| Msa0383870 | Msa1367400 | 0.811949 | 5.419425e-51 | -8.615850e-47 |
| Msa0388790 | Msa1367400 | 0.801860 | 7.377847e-49 | -8.615850e-47 |
| Msa0404710 | Msa1367400 | 0.803274 | 3.769457e-49 | -8.615850e-47 |
| Msa0414930 | Msa1367400 | 0.807588 | 4.698018e-50 | -8.615850e-47 |
| Msa0415160 | Msa1367400 | 0.817147 | 3.834202e-52 | -8.615850e-47 |
| Msa0415760 | Msa1367400 | 0.810398 | 1.175908e-50 | -8.615850e-47 |
| Msa0435900 | Msa1367400 | 0.815479 | 9.054583e-52 | -8.615850e-47 |
| Msa0437820 | Msa1367400 | 0.830524 | 2.798342e-55 | -8.615850e-47 |
| Msa0439950 | Msa1367400 | 0.811219 | 7.812494e-51 | -8.615850e-47 |
| Msa0460510 | Msa1367400 | 0.813440 | 2.556874e-51 | -8.615850e-47 |
| Msa0461620 | Msa1367400 | 0.829332 | 5.461172e-55 | -8.615850e-47 |
| Msa0463030 | Msa1367400 | 0.804866 | 1.758554e-49 | -8.615850e-47 |
| Msa0476170 | Msa1367400 | 0.829412 | 5.224170e-55 | -8.615850e-47 |
| Msa0476890 | Msa1367400 | 0.826651 | 2.413158e-54 | -8.615850e-47 |
| Msa0478740 | Msa1367400 | 0.817945 | 2.533500e-52 | -8.615850e-47 |
| Msa0480090 | Msa1367400 | 0.823943 | 1.054930e-53 | -8.615850e-47 |
| Msa0982090 | Msa1367400 | 0.860766 | 1.643140e-63 | -8.615850e-47 |
| Msa0983680 | Msa1367400 | 0.801713 | 7.907465e-49 | -8.615850e-47 |
| Msa1002550 | Msa1367400 | 0.804787 | 1.826972e-49 | -8.615850e-47 |
| Msa1009940 | Msa1367400 | 0.807132 | 5.869179e-50 | -8.615850e-47 |
| Msa1028860 | Msa1367400 | 0.815171 | 1.059887e-51 | -8.615850e-47 |
| Msa1031190 | Msa1367400 | 0.805705 | 1.173427e-49 | -8.615850e-47 |
| Msa1067980 | Msa1367400 | 0.813920 | 2.004497e-51 | -8.615850e-47 |
| Msa1070370 | Msa1367400 | 0.806843 | 6.754492e-50 | -8.615850e-47 |
| Msa1083620 | Msa1367400 | 0.801117 | 1.047642e-48 | -8.615850e-47 |
| Msa1085610 | Msa1367400 | 0.841869 | 3.657769e-58 | -8.615850e-47 |
| Msa1086320 | Msa1367400 | 0.819114 | 1.376811e-52 | -8.615850e-47 |
| Msa1086490 | Msa1367400 | 0.823480 | 1.354456e-53 | -8.615850e-47 |
| Msa1086510 | Msa1367400 | 0.811058 | 8.464442e-51 | -8.615850e-47 |
| Msa1086670 | Msa1367400 | 0.830103 | 3.545976e-55 | -8.615850e-47 |
| Msa1086840 | Msa1367400 | 0.816765 | 4.671841e-52 | -8.615850e-47 |
| Msa0260580 | Msa1367400 | 0.810212 | 1.289334e-50 | -8.615850e-47 |
| Msa0261350 | Msa1367400 | 0.807891 | 4.049659e-50 | -8.615850e-47 |
| Msa0262350 | Msa1367400 | 0.826812 | 2.208660e-54 | -8.615850e-47 |
| Msa0268210 | Msa1367400 | 0.823262 | 1.522527e-53 | -8.615850e-47 |
| Msa0268450 | Msa1367400 | 0.825326 | 4.982978e-54 | -8.615850e-47 |
| Msa0268670 | Msa1367400 | 0.823140 | 1.625570e-53 | -8.615850e-47 |
| Msa0268880 | Msa1367400 | 0.825731 | 3.994573e-54 | -8.615850e-47 |
| Msa0269090 | Msa1367400 | 0.808609 | 2.847814e-50 | -8.615850e-47 |
| Msa0274710 | Msa1367400 | 0.805738 | 1.154595e-49 | -8.615850e-47 |
| Msa0288170 | Msa1367400 | 0.815599 | 8.512775e-52 | -8.615850e-47 |
| Msa0300130 | Msa1367400 | 0.823770 | 1.158241e-53 | -8.615850e-47 |
| Msa0310270 | Msa1367400 | 0.802015 | 6.856476e-49 | -8.615850e-47 |
| Msa0310720 | Msa1367400 | 0.846732 | 1.805811e-59 | -8.615850e-47 |
| Msa0310730 | Msa1367400 | 0.860768 | 1.640250e-63 | -8.615850e-47 |
| Msa0326630 | Msa1367400 | 0.835852 | 1.317897e-56 | -8.615850e-47 |
| Msa0340700 | Msa1367400 | 0.805560 | 1.258508e-49 | -8.615850e-47 |
| Msa1117770 | Msa1367400 | 0.816158 | 6.386648e-52 | -8.615850e-47 |
| Msa1119420 | Msa1367400 | 0.810748 | 9.880344e-51 | -8.615850e-47 |
| Msa1121720 | Msa1367400 | 0.802841 | 4.633079e-49 | -8.615850e-47 |
| Msa1128610 | Msa1367400 | 0.809680 | 1.679002e-50 | -8.615850e-47 |
| Msa1129300 | Msa1367400 | 0.858681 | 6.969662e-63 | -8.615850e-47 |
| Msa1130150 | Msa1367400 | 0.803099 | 4.097384e-49 | -8.615850e-47 |
| Msa1156120 | Msa1367400 | 0.814452 | 1.529858e-51 | -8.615850e-47 |
| Msa1158180 | Msa1367400 | 0.806479 | 8.062097e-50 | -8.615850e-47 |
| Msa1175340 | Msa1367400 | 0.812087 | 5.058641e-51 | -8.615850e-47 |
| Msa1197740 | Msa1367400 | 0.808321 | 3.280679e-50 | -8.615850e-47 |
| Msa1212150 | Msa1367400 | 0.829403 | 5.249993e-55 | -8.615850e-47 |
| Msa1212210 | Msa1367400 | 0.826197 | 3.095185e-54 | -8.615850e-47 |
| Msa0507960 | Msa1367400 | 0.812442 | 4.231688e-51 | -8.615850e-47 |
| Msa0521260 | Msa1367400 | 0.812170 | 4.852102e-51 | -8.615850e-47 |
| Msa0522960 | Msa1367400 | 0.814438 | 1.540993e-51 | -8.615850e-47 |
| Msa0523430 | Msa1367400 | 0.803263 | 3.789881e-49 | -8.615850e-47 |
| Msa0523490 | Msa1367400 | 0.801701 | 7.952533e-49 | -8.615850e-47 |
| Msa0548650 | Msa1367400 | 0.855465 | 6.196598e-62 | -8.615850e-47 |
| Msa0550980 | Msa1367400 | 0.809940 | 1.475617e-50 | -8.615850e-47 |
| Msa0550990 | Msa1367400 | 0.829131 | 6.111913e-55 | -8.615850e-47 |
| Msa0552090 | Msa1367400 | 0.819890 | 9.156996e-53 | -8.615850e-47 |
| Msa0557440 | Msa1367400 | 0.818589 | 1.811486e-52 | -8.615850e-47 |
| Msa0576020 | Msa1367400 | 0.840937 | 6.435555e-58 | -8.615850e-47 |
| Msa0576080 | Msa1367400 | 0.832106 | 1.142460e-55 | -8.615850e-47 |
| Msa0576120 | Msa1367400 | 0.847945 | 8.388979e-60 | -8.615850e-47 |
| Msa0582560 | Msa1367400 | 0.800860 | 1.181956e-48 | -8.615850e-47 |
| Msa0582860 | Msa1367400 | 0.811257 | 7.661951e-51 | -8.615850e-47 |
| Msa0590900 | Msa1367400 | 0.828389 | 9.238651e-55 | -8.615850e-47 |
| Msa0860630 | Msa1367400 | 0.812707 | 3.702831e-51 | -8.615850e-47 |
| Msa0864820 | Msa1367400 | 0.877452 | 6.212278e-69 | -8.615850e-47 |
| Msa0866060 | Msa1367400 | 0.845356 | 4.273294e-59 | -8.615850e-47 |
| Msa0869320 | Msa1367400 | 0.810996 | 8.731044e-51 | -8.615850e-47 |
| Msa0869420 | Msa1367400 | 0.819208 | 1.310231e-52 | -8.615850e-47 |
| Msa0881530 | Msa1367400 | 0.870438 | 1.458784e-66 | -8.615850e-47 |
| Msa0888520 | Msa1367400 | 0.812555 | 3.997040e-51 | -8.615850e-47 |
| Msa0919120 | Msa1367400 | 0.815852 | 7.474790e-52 | -8.615850e-47 |
| Msa0931180 | Msa1367400 | 0.800183 | 1.624231e-48 | -8.615850e-47 |
| Msa0945160 | Msa1367400 | 0.818171 | 2.252961e-52 | -8.615850e-47 |
| Msa0971690 | Msa1367400 | 0.830068 | 3.615019e-55 | -8.615850e-47 |
| Msa0974470 | Msa1367400 | 0.811915 | 5.513307e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367400 | MtrunA17_Chr3g0145501 | 97.861 | 187 | 3 | 1 | 3 | 188 | 5 | 191 | 1.64e-133 | 371 |
| Msa1367400 | MtrunA17_Chr4g0038431 | 86.471 | 170 | 23 | 0 | 9 | 178 | 3 | 172 | 8.83e-110 | 310 |
| Msa1367400 | MtrunA17_Chr7g0274841 | 75.882 | 170 | 41 | 0 | 9 | 178 | 3 | 172 | 1.54e-96 | 277 |
| Msa1367400 | MtrunA17_Chr3g0104751 | 67.665 | 167 | 54 | 0 | 11 | 177 | 35 | 201 | 1.41e-79 | 235 |
| Msa1367400 | MtrunA17_Chr3g0113441 | 62.921 | 178 | 66 | 0 | 1 | 178 | 55 | 232 | 3.46e-79 | 235 |
| Msa1367400 | MtrunA17_Chr7g0260441 | 63.743 | 171 | 61 | 1 | 9 | 178 | 6 | 176 | 7.31e-75 | 236 |
| Msa1367400 | MtrunA17_Chr8g0374621 | 58.757 | 177 | 71 | 2 | 8 | 182 | 2 | 178 | 6.47e-68 | 211 |
| Msa1367400 | MtrunA17_Chr1g0213971 | 60.819 | 171 | 56 | 3 | 11 | 177 | 78 | 241 | 1.89e-67 | 206 |
| Msa1367400 | MtrunA17_Chr8g0353571 | 58.857 | 175 | 67 | 4 | 6 | 177 | 13 | 185 | 1.72e-66 | 201 |
| Msa1367400 | MtrunA17_Chr1g0193711 | 66.438 | 146 | 42 | 1 | 11 | 156 | 86 | 224 | 2.97e-66 | 203 |
| Msa1367400 | MtrunA17_Chr7g0270991 | 58.523 | 176 | 55 | 3 | 11 | 180 | 97 | 260 | 6.22e-66 | 202 |
| Msa1367400 | MtrunA17_Chr4g0045321 | 57.386 | 176 | 69 | 3 | 11 | 182 | 5 | 178 | 1.41e-63 | 200 |
| Msa1367400 | MtrunA17_Chr4g0037281 | 53.448 | 174 | 79 | 2 | 6 | 177 | 42 | 215 | 1.19e-58 | 183 |
| Msa1367400 | MtrunA17_Chr3g0138061 | 51.445 | 173 | 83 | 1 | 9 | 180 | 9 | 181 | 6.13e-52 | 178 |
| Msa1367400 | MtrunA17_Chr1g0149061 | 48.555 | 173 | 87 | 2 | 9 | 180 | 6 | 177 | 2.33e-44 | 156 |
| Msa1367400 | MtrunA17_Chr2g0321111 | 52.027 | 148 | 55 | 5 | 23 | 168 | 470 | 603 | 2.21e-35 | 130 |
| Msa1367400 | MtrunA17_Chr7g0266721 | 50.360 | 139 | 53 | 4 | 23 | 158 | 18 | 143 | 4.18e-35 | 121 |
| Msa1367400 | MtrunA17_Chr8g0351571 | 48.611 | 144 | 58 | 5 | 23 | 163 | 9 | 139 | 3.22e-33 | 116 |
| Msa1367400 | MtrunA17_Chr5g0401141 | 48.529 | 136 | 58 | 4 | 24 | 158 | 354 | 478 | 2.60e-28 | 110 |
| Msa1367400 | MtrunA17_Chr6g0484281 | 38.824 | 170 | 83 | 6 | 23 | 182 | 9 | 167 | 8.84e-23 | 94.7 |
| Msa1367400 | MtrunA17_Chr8g0357591 | 38.235 | 170 | 84 | 6 | 23 | 182 | 9 | 167 | 1.06e-21 | 91.7 |
| Msa1367400 | MtrunA17_Chr3g0122871 | 59.677 | 62 | 25 | 0 | 102 | 163 | 55 | 116 | 2.30e-21 | 84.7 |
| Msa1367400 | MtrunA17_Chr2g0288371 | 42.400 | 125 | 59 | 5 | 24 | 146 | 22 | 135 | 7.23e-18 | 80.5 |
| Msa1367400 | MtrunA17_Chr1g0199071 | 35.897 | 156 | 66 | 7 | 24 | 170 | 89 | 219 | 2.46e-14 | 68.6 |
| Msa1367400 | MtrunA17_Chr1g0163031 | 29.299 | 157 | 93 | 5 | 24 | 177 | 88 | 229 | 1.51e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367400 | AT2G16600.1 | 83.529 | 170 | 28 | 0 | 9 | 178 | 4 | 173 | 6.47e-106 | 301 |
| Msa1367400 | AT4G38740.1 | 80.473 | 169 | 33 | 0 | 10 | 178 | 4 | 172 | 2.54e-101 | 290 |
| Msa1367400 | AT2G21130.1 | 78.824 | 170 | 36 | 0 | 9 | 178 | 4 | 173 | 2.14e-100 | 287 |
| Msa1367400 | AT4G34870.1 | 79.412 | 170 | 35 | 0 | 9 | 178 | 3 | 172 | 1.59e-99 | 285 |
| Msa1367400 | AT3G56070.1 | 72.515 | 171 | 47 | 0 | 9 | 179 | 3 | 173 | 1.51e-90 | 262 |
| Msa1367400 | AT3G56070.2 | 72.515 | 171 | 47 | 0 | 9 | 179 | 3 | 173 | 1.51e-90 | 262 |
| Msa1367400 | AT2G16600.2 | 71.765 | 170 | 26 | 1 | 9 | 178 | 4 | 151 | 7.98e-84 | 244 |
| Msa1367400 | AT2G29960.1 | 67.066 | 167 | 55 | 0 | 11 | 177 | 33 | 199 | 1.64e-78 | 233 |
| Msa1367400 | AT2G29960.3 | 67.066 | 167 | 55 | 0 | 11 | 177 | 33 | 199 | 1.64e-78 | 233 |
| Msa1367400 | AT3G63400.2 | 66.667 | 171 | 56 | 1 | 9 | 178 | 6 | 176 | 9.17e-77 | 235 |
| Msa1367400 | AT5G58710.1 | 65.868 | 167 | 57 | 0 | 11 | 177 | 36 | 202 | 1.62e-76 | 228 |
| Msa1367400 | AT3G63400.3 | 66.667 | 171 | 56 | 1 | 9 | 178 | 6 | 176 | 4.95e-75 | 235 |
| Msa1367400 | AT3G63400.4 | 66.667 | 171 | 56 | 1 | 9 | 178 | 6 | 176 | 4.95e-75 | 235 |
| Msa1367400 | AT3G63400.1 | 66.667 | 171 | 56 | 1 | 9 | 178 | 6 | 176 | 4.95e-75 | 235 |
| Msa1367400 | AT5G13120.2 | 62.983 | 181 | 56 | 3 | 1 | 177 | 77 | 250 | 2.71e-74 | 224 |
| Msa1367400 | AT5G13120.1 | 62.983 | 181 | 56 | 3 | 1 | 177 | 81 | 254 | 4.81e-74 | 224 |
| Msa1367400 | AT3G55920.1 | 61.905 | 168 | 64 | 0 | 11 | 178 | 60 | 227 | 3.38e-73 | 220 |
| Msa1367400 | AT2G29960.2 | 62.275 | 167 | 53 | 1 | 11 | 177 | 33 | 189 | 2.15e-69 | 209 |
| Msa1367400 | AT3G62030.3 | 58.989 | 178 | 65 | 2 | 4 | 180 | 88 | 258 | 8.37e-69 | 210 |
| Msa1367400 | AT3G62030.1 | 58.989 | 178 | 65 | 2 | 4 | 180 | 89 | 259 | 9.32e-69 | 210 |
| Msa1367400 | AT3G62030.2 | 58.989 | 178 | 65 | 2 | 4 | 180 | 142 | 312 | 3.76e-68 | 210 |
| Msa1367400 | AT2G15790.1 | 60.920 | 174 | 66 | 2 | 11 | 182 | 5 | 178 | 5.79e-65 | 204 |
| Msa1367400 | AT2G38730.1 | 58.857 | 175 | 67 | 4 | 6 | 177 | 27 | 199 | 7.18e-65 | 198 |
| Msa1367400 | AT4G34960.1 | 54.070 | 172 | 78 | 1 | 11 | 181 | 48 | 219 | 2.07e-60 | 188 |
| Msa1367400 | AT3G22920.1 | 53.143 | 175 | 70 | 5 | 9 | 179 | 3 | 169 | 6.13e-54 | 171 |
| Msa1367400 | AT4G34960.2 | 55.645 | 124 | 55 | 0 | 11 | 134 | 48 | 171 | 8.91e-46 | 149 |
| Msa1367400 | AT4G32420.1 | 47.929 | 169 | 87 | 1 | 9 | 176 | 6 | 174 | 1.02e-45 | 160 |
| Msa1367400 | AT4G32420.5 | 47.929 | 169 | 87 | 1 | 9 | 176 | 6 | 174 | 1.02e-45 | 160 |
| Msa1367400 | AT4G32420.3 | 47.929 | 169 | 87 | 1 | 9 | 176 | 6 | 174 | 1.02e-45 | 160 |
| Msa1367400 | AT4G32420.6 | 47.929 | 169 | 87 | 1 | 9 | 176 | 6 | 174 | 1.02e-45 | 160 |
| Msa1367400 | AT4G32420.4 | 48.408 | 157 | 80 | 1 | 9 | 164 | 6 | 162 | 2.38e-42 | 151 |
| Msa1367400 | AT2G36130.1 | 48.649 | 148 | 62 | 5 | 23 | 169 | 18 | 152 | 1.82e-36 | 125 |
| Msa1367400 | AT3G44600.1 | 51.429 | 140 | 54 | 4 | 23 | 160 | 484 | 611 | 6.66e-34 | 126 |
| Msa1367400 | AT1G01940.1 | 48.252 | 143 | 60 | 5 | 23 | 163 | 9 | 139 | 7.31e-33 | 115 |
| Msa1367400 | AT5G67530.1 | 45.806 | 155 | 65 | 6 | 7 | 158 | 339 | 477 | 7.23e-28 | 109 |
| Msa1367400 | AT4G33060.1 | 45.600 | 125 | 55 | 5 | 24 | 146 | 22 | 135 | 1.22e-24 | 100 |
| Msa1367400 | AT1G53720.2 | 38.028 | 142 | 68 | 5 | 23 | 155 | 9 | 139 | 1.30e-20 | 87.8 |
| Msa1367400 | AT1G53720.1 | 38.028 | 142 | 68 | 5 | 23 | 155 | 9 | 139 | 2.20e-20 | 88.2 |
Find 81 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTCTCGTCGGCGAATT+TGG | 0.117790 | tig0018513:-78391 | None:intergenic |
| TGGGATTGGGGTTGGGGATG+GGG | 0.189257 | tig0018513:-78119 | None:intergenic |
| TTGGGATTGGGGTTGGGGAT+GGG | 0.254630 | tig0018513:-78120 | None:intergenic |
| AGACTTTGGGATTGGGGTTG+GGG | 0.279401 | tig0018513:-78125 | None:intergenic |
| AAGACTTTGGGATTGGGGTT+GGG | 0.281079 | tig0018513:-78126 | None:intergenic |
| GAGAAAGTTGGGTCCGGTTC+GGG | 0.294795 | tig0018513:+78576 | Msa1367400:CDS |
| TTTGGGATTGGGGTTGGGGA+TGG | 0.340234 | tig0018513:-78121 | None:intergenic |
| CTCTCCACCGGTACCATTAC+CGG | 0.380312 | tig0018513:-78355 | None:intergenic |
| GGCGAATTTGGACCCGTAGA+TGG | 0.381308 | tig0018513:-78379 | None:intergenic |
| TCGAAGAAGACTTTGGGATT+GGG | 0.389727 | tig0018513:-78132 | None:intergenic |
| GAAGACTTTGGGATTGGGGT+TGG | 0.396057 | tig0018513:-78127 | None:intergenic |
| TGAGAAAGTTGGGTCCGGTT+CGG | 0.405741 | tig0018513:+78575 | Msa1367400:CDS |
| GTGAAAGAGATTGAGAAAGT+TGG | 0.416986 | tig0018513:+78564 | Msa1367400:CDS |
| ATGGTAGCTATATATGTTGT+TGG | 0.423422 | tig0018513:-78662 | None:intergenic |
| GTCGAAGAAGACTTTGGGAT+TGG | 0.424528 | tig0018513:-78133 | None:intergenic |
| GTCATGTCGAAGAAGACTTT+GGG | 0.428350 | tig0018513:-78138 | None:intergenic |
| GCAGAGTGCACGGAAGTTAT+CGG | 0.432521 | tig0018513:-78226 | None:intergenic |
| TGGTGAGGTGGTTGAAGGAA+TGG | 0.433417 | tig0018513:+78536 | Msa1367400:CDS |
| GCGAAGACGGAGTGGCTTGA+TGG | 0.435031 | tig0018513:+78498 | Msa1367400:CDS |
| CGAAGAAGACTTTGGGATTG+GGG | 0.456798 | tig0018513:-78131 | None:intergenic |
| CCTCCTTGACACATGAAATC+AGG | 0.460761 | tig0018513:-78321 | None:intergenic |
| GGTCATGTCGAAGAAGACTT+TGG | 0.463837 | tig0018513:-78139 | None:intergenic |
| GCACTCTGCACCGGGGAGAA+AGG | 0.471854 | tig0018513:+78240 | Msa1367400:CDS |
| ACCGGTGGAGAGTCCATCTA+CGG | 0.473790 | tig0018513:+78366 | Msa1367400:CDS |
| AACTTCCGTGCACTCTGCAC+CGG | 0.478449 | tig0018513:+78231 | Msa1367400:CDS |
| AGGTCCAGGTGTTCTTTCAA+TGG | 0.486279 | tig0018513:+78428 | Msa1367400:CDS |
| CTTCATATGCACGGCGAAGA+CGG | 0.491522 | tig0018513:+78485 | Msa1367400:CDS |
| TGAAAGAGATTGAGAAAGTT+GGG | 0.494450 | tig0018513:+78565 | Msa1367400:CDS |
| GTTCTTTCAATGGCGAATGC+GGG | 0.507071 | tig0018513:+78438 | Msa1367400:CDS |
| CGAAGACGGAGTGGCTTGAT+GGG | 0.510239 | tig0018513:+78499 | Msa1367400:CDS |
| GGTGACTTCACCGCCGGTAA+TGG | 0.512626 | tig0018513:+78342 | Msa1367400:CDS |
| GATCATTATCATCAGAGAGT+TGG | 0.513860 | tig0018513:-78635 | None:intergenic |
| ATCAAGACCCACACAGGTCC+AGG | 0.524358 | tig0018513:+78414 | Msa1367400:CDS |
| CATGACCGTCGGAGACGAAC+CGG | 0.524784 | tig0018513:+78155 | Msa1367400:CDS |
| ACTTCCGTGCACTCTGCACC+GGG | 0.526298 | tig0018513:+78232 | Msa1367400:CDS |
| GGAAGATAGAGCCTTTGTAA+TGG | 0.527764 | tig0018513:-78287 | None:intergenic |
| GAGATTGAGAAAGTTGGGTC+CGG | 0.536951 | tig0018513:+78570 | Msa1367400:CDS |
| TTCGCCATTGAAAGAACACC+TGG | 0.544494 | tig0018513:-78432 | None:intergenic |
| TCTCCCCGGTGCAGAGTGCA+CGG | 0.546941 | tig0018513:-78236 | None:intergenic |
| GAACTGTGATCCATTCGTAC+CGG | 0.549331 | tig0018513:-78463 | None:intergenic |
| AACTGTGATCCATTCGTACC+GGG | 0.549830 | tig0018513:-78462 | None:intergenic |
| AATGCGGGACCCGGTACGAA+TGG | 0.554826 | tig0018513:+78453 | Msa1367400:CDS |
| TGTTCTTTCAATGGCGAATG+CGG | 0.558234 | tig0018513:+78437 | Msa1367400:CDS |
| TTCACCGCCGGTAATGGTAC+CGG | 0.561434 | tig0018513:+78348 | Msa1367400:CDS |
| GTCTTCTTCGACATGACCGT+CGG | 0.574777 | tig0018513:+78144 | Msa1367400:CDS |
| GGCGGTGAGAGGAGTGGTGT+CGG | 0.577204 | tig0018513:-78205 | None:intergenic |
| TCAATGGCGAATGCGGGACC+CGG | 0.581965 | tig0018513:+78444 | Msa1367400:CDS |
| TCCGACCGGTTCGTCTCCGA+CGG | 0.586188 | tig0018513:-78160 | None:intergenic |
| GGTGGTTGAAGGAATGGAGG+TGG | 0.586389 | tig0018513:+78542 | Msa1367400:CDS |
| CCGCAGTCAGCAATAACCAC+CGG | 0.587692 | tig0018513:-78612 | None:intergenic |
| TTCGGGGAAAACATCAAAGC+CGG | 0.592489 | tig0018513:+78593 | Msa1367400:CDS |
| CGGAAGTTATCGGCGGTGAG+AGG | 0.605286 | tig0018513:-78216 | None:intergenic |
| AGAAAGTTGGGTCCGGTTCG+GGG | 0.607170 | tig0018513:+78577 | Msa1367400:CDS |
| ATAGAGCCTTTGTAATGGAG+AGG | 0.607462 | tig0018513:-78282 | None:intergenic |
| CCCGTAGATGGACTCTCCAC+CGG | 0.607666 | tig0018513:-78367 | None:intergenic |
| GCTACCGAGTCCTTTCTCCC+CGG | 0.607787 | tig0018513:-78250 | None:intergenic |
| ATACCTGATTTCATGTGTCA+AGG | 0.608102 | tig0018513:+78318 | Msa1367400:CDS |
| ATCACAGTTCTTCATATGCA+CGG | 0.610600 | tig0018513:+78476 | Msa1367400:CDS |
| TGAGGTGGTTGAAGGAATGG+AGG | 0.611761 | tig0018513:+78539 | Msa1367400:CDS |
| GAGAAAGGACTCGGTAGCAG+TGG | 0.612151 | tig0018513:+78255 | Msa1367400:CDS |
| CAAGGAGGTGACTTCACCGC+CGG | 0.614495 | tig0018513:+78336 | Msa1367400:CDS |
| ACCGCCGGTAATGGTACCGG+TGG | 0.624217 | tig0018513:+78351 | Msa1367400:CDS |
| CCGGTGGAGAGTCCATCTAC+GGG | 0.638547 | tig0018513:+78367 | Msa1367400:CDS |
| AAGAACACCTGGACCTGTGT+GGG | 0.644240 | tig0018513:-78421 | None:intergenic |
| TCCATGACGATACGTCCGAC+CGG | 0.645610 | tig0018513:-78174 | None:intergenic |
| AATTTCATCAAGACCCACAC+AGG | 0.645692 | tig0018513:+78408 | Msa1367400:CDS |
| GGCAAGCCTCTCCATTACAA+AGG | 0.646729 | tig0018513:+78276 | Msa1367400:CDS |
| TGCACCGGGGAGAAAGGACT+CGG | 0.648211 | tig0018513:+78246 | Msa1367400:CDS |
| GGTCTTGATGAAATTCTCGT+CGG | 0.653249 | tig0018513:-78400 | None:intergenic |
| CCTGATTTCATGTGTCAAGG+AGG | 0.663642 | tig0018513:+78321 | Msa1367400:CDS |
| GTTATCGGCGGTGAGAGGAG+TGG | 0.666243 | tig0018513:-78211 | None:intergenic |
| TATGCACGGCGAAGACGGAG+TGG | 0.669618 | tig0018513:+78490 | Msa1367400:CDS |
| TGAAATCAGGTATGACGCGG+TGG | 0.671849 | tig0018513:-78308 | None:intergenic |
| GGGGAAAACATCAAAGCCGG+TGG | 0.686265 | tig0018513:+78596 | Msa1367400:CDS |
| CCGGTGGTTATTGCTGACTG+CGG | 0.692364 | tig0018513:+78612 | Msa1367400:CDS |
| GTGGCTTGATGGGAAACATG+TGG | 0.698636 | tig0018513:+78509 | Msa1367400:CDS |
| ACCGTCGGAGACGAACCGGT+CGG | 0.705667 | tig0018513:+78159 | Msa1367400:CDS |
| TCCACCGGTACCATTACCGG+CGG | 0.707753 | tig0018513:-78352 | None:intergenic |
| AAAGAACACCTGGACCTGTG+TGG | 0.718700 | tig0018513:-78422 | None:intergenic |
| ACATGAAATCAGGTATGACG+CGG | 0.735409 | tig0018513:-78311 | None:intergenic |
| CTTCCGTGCACTCTGCACCG+GGG | 0.766706 | tig0018513:+78233 | Msa1367400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TGAAAGAGATTGAGAAAGTT+GGG | + | tig0018513:78565-78584 | Msa1367400:CDS | 30.0% | |
| ATACCTGATTTCATGTGTCA+AGG | + | tig0018513:78318-78337 | Msa1367400:CDS | 35.0% | |
| ATCACAGTTCTTCATATGCA+CGG | + | tig0018513:78476-78495 | Msa1367400:CDS | 35.0% | |
| GTGAAAGAGATTGAGAAAGT+TGG | + | tig0018513:78564-78583 | Msa1367400:CDS | 35.0% | |
| GATCATTATCATCAGAGAGT+TGG | - | tig0018513:78638-78657 | None:intergenic | 35.0% | |
| !! | TCGAAGAAGACTTTGGGATT+GGG | - | tig0018513:78135-78154 | None:intergenic | 40.0% |
| GTCATGTCGAAGAAGACTTT+GGG | - | tig0018513:78141-78160 | None:intergenic | 40.0% | |
| ! | ATAGAGCCTTTGTAATGGAG+AGG | - | tig0018513:78285-78304 | None:intergenic | 40.0% |
| GGAAGATAGAGCCTTTGTAA+TGG | - | tig0018513:78290-78309 | None:intergenic | 40.0% | |
| ACATGAAATCAGGTATGACG+CGG | - | tig0018513:78314-78333 | None:intergenic | 40.0% | |
| GGTCTTGATGAAATTCTCGT+CGG | - | tig0018513:78403-78422 | None:intergenic | 40.0% | |
| AATTTCATCAAGACCCACAC+AGG | + | tig0018513:78408-78427 | Msa1367400:CDS | 40.0% | |
| TGTTCTTTCAATGGCGAATG+CGG | + | tig0018513:78437-78456 | Msa1367400:CDS | 40.0% | |
| ! | GATGGGAAACATGTGGTTTT+TGG | + | tig0018513:78516-78535 | Msa1367400:CDS | 40.0% |
| !!! | GAAACATGTGGTTTTTGGTG+AGG | + | tig0018513:78521-78540 | Msa1367400:CDS | 40.0% |
| !! | AAGACTTTGGGATTGGGGTT+GGG | - | tig0018513:78129-78148 | None:intergenic | 45.0% |
| !! | CGAAGAAGACTTTGGGATTG+GGG | - | tig0018513:78134-78153 | None:intergenic | 45.0% |
| !! | GTCGAAGAAGACTTTGGGAT+TGG | - | tig0018513:78136-78155 | None:intergenic | 45.0% |
| GGTCATGTCGAAGAAGACTT+TGG | - | tig0018513:78142-78161 | None:intergenic | 45.0% | |
| CCTCCTTGACACATGAAATC+AGG | - | tig0018513:78324-78343 | None:intergenic | 45.0% | |
| CCTGATTTCATGTGTCAAGG+AGG | + | tig0018513:78321-78340 | Msa1367400:CDS | 45.0% | |
| GAAATTCTCGTCGGCGAATT+TGG | - | tig0018513:78394-78413 | None:intergenic | 45.0% | |
| AGGTCCAGGTGTTCTTTCAA+TGG | + | tig0018513:78428-78447 | Msa1367400:CDS | 45.0% | |
| TTCGCCATTGAAAGAACACC+TGG | - | tig0018513:78435-78454 | None:intergenic | 45.0% | |
| GTTCTTTCAATGGCGAATGC+GGG | + | tig0018513:78438-78457 | Msa1367400:CDS | 45.0% | |
| AACTGTGATCCATTCGTACC+GGG | - | tig0018513:78465-78484 | None:intergenic | 45.0% | |
| GAACTGTGATCCATTCGTAC+CGG | - | tig0018513:78466-78485 | None:intergenic | 45.0% | |
| !!! | ACATGTGGTTTTTGGTGAGG+TGG | + | tig0018513:78524-78543 | Msa1367400:CDS | 45.0% |
| !!! | GTTTTTGGTGAGGTGGTTGA+AGG | + | tig0018513:78531-78550 | Msa1367400:CDS | 45.0% |
| GAGATTGAGAAAGTTGGGTC+CGG | + | tig0018513:78570-78589 | Msa1367400:CDS | 45.0% | |
| ! | CTTTGATGTTTTCCCCGAAC+CGG | - | tig0018513:78592-78611 | None:intergenic | 45.0% |
| TTCGGGGAAAACATCAAAGC+CGG | + | tig0018513:78593-78612 | Msa1367400:CDS | 45.0% | |
| !! | AGACTTTGGGATTGGGGTTG+GGG | - | tig0018513:78128-78147 | None:intergenic | 50.0% |
| !! | GAAGACTTTGGGATTGGGGT+TGG | - | tig0018513:78130-78149 | None:intergenic | 50.0% |
| GTCTTCTTCGACATGACCGT+CGG | + | tig0018513:78144-78163 | Msa1367400:CDS | 50.0% | |
| GCAGAGTGCACGGAAGTTAT+CGG | - | tig0018513:78229-78248 | None:intergenic | 50.0% | |
| GGCAAGCCTCTCCATTACAA+AGG | + | tig0018513:78276-78295 | Msa1367400:CDS | 50.0% | |
| TGAAATCAGGTATGACGCGG+TGG | - | tig0018513:78311-78330 | None:intergenic | 50.0% | |
| AAGAACACCTGGACCTGTGT+GGG | - | tig0018513:78424-78443 | None:intergenic | 50.0% | |
| AAAGAACACCTGGACCTGTG+TGG | - | tig0018513:78425-78444 | None:intergenic | 50.0% | |
| CTTCATATGCACGGCGAAGA+CGG | + | tig0018513:78485-78504 | Msa1367400:CDS | 50.0% | |
| GTGGCTTGATGGGAAACATG+TGG | + | tig0018513:78509-78528 | Msa1367400:CDS | 50.0% | |
| TGGTGAGGTGGTTGAAGGAA+TGG | + | tig0018513:78536-78555 | Msa1367400:CDS | 50.0% | |
| TGAGGTGGTTGAAGGAATGG+AGG | + | tig0018513:78539-78558 | Msa1367400:CDS | 50.0% | |
| TGAGAAAGTTGGGTCCGGTT+CGG | + | tig0018513:78575-78594 | Msa1367400:CDS | 50.0% | |
| TTGGGATTGGGGTTGGGGAT+GGG | - | tig0018513:78123-78142 | None:intergenic | 55.0% | |
| ! | TTTGGGATTGGGGTTGGGGA+TGG | - | tig0018513:78124-78143 | None:intergenic | 55.0% |
| TCCATGACGATACGTCCGAC+CGG | - | tig0018513:78177-78196 | None:intergenic | 55.0% | |
| GAGTGCACGGAAGTTATCGG+CGG | - | tig0018513:78226-78245 | None:intergenic | 55.0% | |
| AACTTCCGTGCACTCTGCAC+CGG | + | tig0018513:78231-78250 | Msa1367400:CDS | 55.0% | |
| ! | GAGAAAGGACTCGGTAGCAG+TGG | + | tig0018513:78255-78274 | Msa1367400:CDS | 55.0% |
| ! | TTCACCGCCGGTAATGGTAC+CGG | + | tig0018513:78348-78367 | Msa1367400:CDS | 55.0% |
| CTCTCCACCGGTACCATTAC+CGG | - | tig0018513:78358-78377 | None:intergenic | 55.0% | |
| ACCGGTGGAGAGTCCATCTA+CGG | + | tig0018513:78366-78385 | Msa1367400:CDS | 55.0% | |
| GGCGAATTTGGACCCGTAGA+TGG | - | tig0018513:78382-78401 | None:intergenic | 55.0% | |
| ATCAAGACCCACACAGGTCC+AGG | + | tig0018513:78414-78433 | Msa1367400:CDS | 55.0% | |
| CGAAGACGGAGTGGCTTGAT+GGG | + | tig0018513:78499-78518 | Msa1367400:CDS | 55.0% | |
| GGTGGTTGAAGGAATGGAGG+TGG | + | tig0018513:78542-78561 | Msa1367400:CDS | 55.0% | |
| GAGAAAGTTGGGTCCGGTTC+GGG | + | tig0018513:78576-78595 | Msa1367400:CDS | 55.0% | |
| ! | AGAAAGTTGGGTCCGGTTCG+GGG | + | tig0018513:78577-78596 | Msa1367400:CDS | 55.0% |
| GGGGAAAACATCAAAGCCGG+TGG | + | tig0018513:78596-78615 | Msa1367400:CDS | 55.0% | |
| CCGCAGTCAGCAATAACCAC+CGG | - | tig0018513:78615-78634 | None:intergenic | 55.0% | |
| ! | CCGGTGGTTATTGCTGACTG+CGG | + | tig0018513:78612-78631 | Msa1367400:CDS | 55.0% |
| TGGGATTGGGGTTGGGGATG+GGG | - | tig0018513:78122-78141 | None:intergenic | 60.0% | |
| CATGACCGTCGGAGACGAAC+CGG | + | tig0018513:78155-78174 | Msa1367400:CDS | 60.0% | |
| ACCGGTCGGACGTATCGTCA+TGG | + | tig0018513:78173-78192 | Msa1367400:CDS | 60.0% | |
| GTTATCGGCGGTGAGAGGAG+TGG | - | tig0018513:78214-78233 | None:intergenic | 60.0% | |
| CGGAAGTTATCGGCGGTGAG+AGG | - | tig0018513:78219-78238 | None:intergenic | 60.0% | |
| ACTTCCGTGCACTCTGCACC+GGG | + | tig0018513:78232-78251 | Msa1367400:CDS | 60.0% | |
| TGCACCGGGGAGAAAGGACT+CGG | + | tig0018513:78246-78265 | Msa1367400:CDS | 60.0% | |
| GCTACCGAGTCCTTTCTCCC+CGG | - | tig0018513:78253-78272 | None:intergenic | 60.0% | |
| CAAGGAGGTGACTTCACCGC+CGG | + | tig0018513:78336-78355 | Msa1367400:CDS | 60.0% | |
| GGTGACTTCACCGCCGGTAA+TGG | + | tig0018513:78342-78361 | Msa1367400:CDS | 60.0% | |
| TCCACCGGTACCATTACCGG+CGG | - | tig0018513:78355-78374 | None:intergenic | 60.0% | |
| ! | CCCGTAGATGGACTCTCCAC+CGG | - | tig0018513:78370-78389 | None:intergenic | 60.0% |
| CCGGTGGAGAGTCCATCTAC+GGG | + | tig0018513:78367-78386 | Msa1367400:CDS | 60.0% | |
| TCAATGGCGAATGCGGGACC+CGG | + | tig0018513:78444-78463 | Msa1367400:CDS | 60.0% | |
| AATGCGGGACCCGGTACGAA+TGG | + | tig0018513:78453-78472 | Msa1367400:CDS | 60.0% | |
| TATGCACGGCGAAGACGGAG+TGG | + | tig0018513:78490-78509 | Msa1367400:CDS | 60.0% | |
| GCGAAGACGGAGTGGCTTGA+TGG | + | tig0018513:78498-78517 | Msa1367400:CDS | 60.0% | |
| ACCGTCGGAGACGAACCGGT+CGG | + | tig0018513:78159-78178 | Msa1367400:CDS | 65.0% | |
| !! | TCCGACCGGTTCGTCTCCGA+CGG | - | tig0018513:78163-78182 | None:intergenic | 65.0% |
| GGCGGTGAGAGGAGTGGTGT+CGG | - | tig0018513:78208-78227 | None:intergenic | 65.0% | |
| CTTCCGTGCACTCTGCACCG+GGG | + | tig0018513:78233-78252 | Msa1367400:CDS | 65.0% | |
| TCTCCCCGGTGCAGAGTGCA+CGG | - | tig0018513:78239-78258 | None:intergenic | 65.0% | |
| GCACTCTGCACCGGGGAGAA+AGG | + | tig0018513:78240-78259 | Msa1367400:CDS | 65.0% | |
| ! | ACCGCCGGTAATGGTACCGG+TGG | + | tig0018513:78351-78370 | Msa1367400:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018513 | gene | 78111 | 78677 | 78111 | ID=Msa1367400;Name=Msa1367400 |
| tig0018513 | mRNA | 78111 | 78677 | 78111 | ID=Msa1367400-mRNA-1;Parent=Msa1367400;Name=Msa1367400-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|1|1|0|188 |
| tig0018513 | exon | 78111 | 78677 | 78111 | ID=Msa1367400-mRNA-1:exon:15493;Parent=Msa1367400-mRNA-1 |
| tig0018513 | CDS | 78111 | 78677 | 78111 | ID=Msa1367400-mRNA-1:cds;Parent=Msa1367400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
