AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0113370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113370 MtrunA17_Chr1g0171191 89.614 414 14 1 1 385 1 414 0.0 711
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113370 AT3G56160.3 66.055 327 106 3 61 385 86 409 7.31e-139 402
Msa0113370 AT3G56160.1 66.055 327 106 3 61 385 113 436 2.05e-138 402
Msa0113370 AT3G56160.2 65.672 268 89 1 61 328 86 350 7.32e-111 328
Msa0113370 AT3G56160.5 68.750 224 70 0 61 284 113 336 2.39e-95 288
Msa0113370 AT3G56160.4 64.205 176 63 0 61 236 86 261 4.43e-64 207

Find 127 sgRNAs with CRISPR-Local

Find 651 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATATCATGTATCCAAAAT+TGG 0.149667 1_3:-29286199 Msa0113370:CDS
AATTCCAAACGGCCCAATTT+TGG 0.174825 1_3:+29286186 None:intergenic
GCATGGCCTGTTGGACTCTT+TGG 0.175566 1_3:-29286000 Msa0113370:CDS
CAATTACCTTTCCCAAAATA+AGG 0.180711 1_3:+29282047 None:intergenic
ACTTCTTCATGTGACCTTAT+TGG 0.188930 1_3:-29277906 Msa0113370:CDS
CTCTGATTTCTATTCACTTA+TGG 0.205037 1_3:-29277114 Msa0113370:three_prime_UTR
GTACAAGAGCATACTAATTT+TGG 0.220761 1_3:+29277237 None:intergenic
AGACATCCACCACTCATTAT+TGG 0.227880 1_3:-29277016 Msa0113370:three_prime_UTR
CTCTTGTACATTGTTCATTC+TGG 0.239014 1_3:-29277223 Msa0113370:three_prime_UTR
GCGGCGTGAGGATGAGTAAA+TGG 0.248025 1_3:+29286954 None:intergenic
TGTGGTGCATTTGGAGAATC+TGG 0.261628 1_3:-29277578 Msa0113370:CDS
ATTTGGAGAATCTGGGTTAC+TGG 0.268679 1_3:-29277570 Msa0113370:CDS
ACTTTGATTCTGCAGCTTGC+TGG 0.286403 1_3:-29283649 Msa0113370:intron
TTACATGATTACTTGGTATA+AGG 0.296905 1_3:+29277068 None:intergenic
CAACCCCAAGAATTTATTAC+AGG 0.300555 1_3:-29284256 Msa0113370:intron
CGGGAAGAAGGGGAAAATAG+AGG 0.303301 1_3:+29286905 None:intergenic
CTAAACCTGTAATAAATTCT+TGG 0.309750 1_3:+29284251 None:intergenic
TCTATAACCGCAACCATTAC+TGG 0.309807 1_3:+29277608 None:intergenic
CATGGCCTGTTGGACTCTTT+GGG 0.310381 1_3:-29285999 Msa0113370:CDS
AATTACCTTTCCCAAAATAA+GGG 0.315621 1_3:+29282048 None:intergenic
GAGCCACTTTGTGGTGCATT+TGG 0.332991 1_3:-29277587 Msa0113370:CDS
TAAACCTGTAATAAATTCTT+GGG 0.340341 1_3:+29284252 None:intergenic
GTATCCAAAATTGGGCCGTT+TGG 0.365828 1_3:-29286190 Msa0113370:CDS
CTGATTTCTGCGGTGACGTT+AGG 0.368875 1_3:-29286256 Msa0113370:CDS
CAGCATATAGTTCAATATAA+TGG 0.387674 1_3:-29277153 Msa0113370:three_prime_UTR
GAAAATAGAGGGGTTGGACG+AGG 0.389124 1_3:+29286917 None:intergenic
AATATTACCCTGGAAAAGTA+TGG 0.392592 1_3:+29284292 None:intergenic
ATAGTTCAATATAATGGATA+TGG 0.393051 1_3:-29277147 Msa0113370:three_prime_UTR
TTAAGCCACCTTGACATTAC+CGG 0.393563 1_3:+29277399 None:intergenic
AGTTGGCATACAGCAAAATA+TGG 0.395674 1_3:+29283830 None:intergenic
ACAGTAATATCTAACTTGTT+AGG 0.396771 1_3:-29283598 Msa0113370:CDS
CGGAGTCTTTCAGTTATCTC+TGG 0.421533 1_3:-29277863 Msa0113370:CDS
AATATCATGTATCCAAAATT+GGG 0.421936 1_3:-29286198 Msa0113370:CDS
GCATGGCGAGGGCGGGAAGA+AGG 0.423861 1_3:+29286893 None:intergenic
GTCTGAAGGGAGTGGGGAGG+TGG 0.427985 1_3:+29286840 None:intergenic
TCAGAAAACATTACCAGTAA+TGG 0.428375 1_3:-29277621 Msa0113370:intron
CATGGCGAGGGCGGGAAGAA+GGG 0.432595 1_3:+29286894 None:intergenic
GGACTGCTTACATGATTACT+TGG 0.436085 1_3:+29277061 None:intergenic
TGGGGAGGTGGCGTAGAGTG+AGG 0.442564 1_3:+29286852 None:intergenic
AACGCTATTGAATACCAATA+AGG 0.446187 1_3:+29277892 None:intergenic
AAGAGTGTTAACAATTTGCT+TGG 0.457278 1_3:-29277284 Msa0113370:three_prime_UTR
TCATCTGTGGATTGATATGC+TGG 0.458402 1_3:-29277342 Msa0113370:three_prime_UTR
ATCACAAAATTTGTAGCTAG+TGG 0.459990 1_3:-29282133 Msa0113370:CDS
CATTATATTGAACTATATGC+TGG 0.465582 1_3:+29277154 None:intergenic
ACCATGTGCTCAATCCCATC+AGG 0.465639 1_3:-29286819 Msa0113370:CDS
ATGGCGAGGGCGGGAAGAAG+GGG 0.466078 1_3:+29286895 None:intergenic
TGATTTCTATTCACTTATGG+TGG 0.468754 1_3:-29277111 Msa0113370:three_prime_UTR
ACTAGCCCAAAGAGTCCAAC+AGG 0.477856 1_3:+29285994 None:intergenic
GGATTAACATGTCCTAGTCT+TGG 0.479373 1_3:-29286235 Msa0113370:CDS
GGAGTGAGCATGGCGAGGGC+GGG 0.480166 1_3:+29286886 None:intergenic
CTGTAATAAATTCTTGGGGT+TGG 0.480588 1_3:+29284257 None:intergenic
GCTGTAGAAGCATGGCCTGT+TGG 0.481048 1_3:-29286009 Msa0113370:CDS
CGGAGTGAGCATGGCGAGGG+CGG 0.482094 1_3:+29286885 None:intergenic
GGGAAGAAGGGGAAAATAGA+GGG 0.485919 1_3:+29286906 None:intergenic
AAATTTGTAGCTAGTGGAGT+TGG 0.486943 1_3:-29282127 Msa0113370:CDS
AGGGGTTGGACGAGGGAATG+AGG 0.487237 1_3:+29286925 None:intergenic
TTTCTTGTAGCTATTGGACT+GGG 0.493824 1_3:-29278820 Msa0113370:CDS
GAAGGGGAAAATAGAGGGGT+TGG 0.496201 1_3:+29286911 None:intergenic
CCCTGATGGGATTGAGCACA+TGG 0.499515 1_3:+29286818 None:intergenic
ATATCATCCTGCAGGTACCT+TGG 0.501746 1_3:-29278894 Msa0113370:intron
GCGTAGAGTGAGGGATTTAA+CGG 0.505353 1_3:+29286862 None:intergenic
GGGGAGGTGGCGTAGAGTGA+GGG 0.511032 1_3:+29286853 None:intergenic
AAAATAGAGGGGTTGGACGA+GGG 0.518366 1_3:+29286918 None:intergenic
ACACCACTTGATAATGTAGT+TGG 0.522256 1_3:+29283813 None:intergenic
CGGCGTGAGGATGAGTAAAT+GGG 0.522959 1_3:+29286955 None:intergenic
CACTCGACGGAGGTCATGGC+GGG 0.524722 1_3:-29286986 None:intergenic
TATTCAATAGCGTTGCTGTC+CGG 0.524867 1_3:-29277883 Msa0113370:CDS
TGCTGGAGCAAATACTGCAC+TGG 0.529303 1_3:-29283632 Msa0113370:CDS
AACATTACCAGTAATGGTTG+CGG 0.539630 1_3:-29277615 Msa0113370:CDS
GACTTGCTCACTTGTATCCA+AGG 0.541072 1_3:+29278877 None:intergenic
GTGGTGCATTTGGAGAATCT+GGG 0.542143 1_3:-29277577 Msa0113370:CDS
ACTCATACTAGTTGCAAGCC+AGG 0.542506 1_3:-29277798 Msa0113370:intron
AAAGATCGGAAACAATATGC+TGG 0.543161 1_3:+29277191 None:intergenic
GTGTTGCGAAGCGAAGAAAT+TGG 0.543607 1_3:-29286036 Msa0113370:CDS
ATAATGAGTGGTGGATGTCT+TGG 0.544173 1_3:+29277019 None:intergenic
TACCACTACCATCTCCCTGA+TGG 0.544344 1_3:+29286804 None:intergenic
ACCACTACCATCTCCCTGAT+GGG 0.545056 1_3:+29286805 None:intergenic
GGATTGAGCACATGGTCTGA+AGG 0.546750 1_3:+29286826 None:intergenic
GGAAGAAGGGGAAAATAGAG+GGG 0.548611 1_3:+29286907 None:intergenic
GCACATGGTCTGAAGGGAGT+GGG 0.548906 1_3:+29286833 None:intergenic
GGCTTCACTATTAACAGAAG+TGG 0.550907 1_3:+29278850 None:intergenic
GCGGTTATAGAGCCACTTTG+TGG 0.557289 1_3:-29277596 Msa0113370:CDS
AGCACATGGTCTGAAGGGAG+TGG 0.558159 1_3:+29286832 None:intergenic
CTGAATTTGTAATATTACCC+TGG 0.558885 1_3:+29284282 None:intergenic
CGGCGGAGTGAGCATGGCGA+GGG 0.559121 1_3:+29286882 None:intergenic
ATTTAACGGCGGAGTGAGCA+TGG 0.559443 1_3:+29286876 None:intergenic
ATTAGATGTGTTGCAATACA+AGG 0.561844 1_3:+29277542 None:intergenic
GAACACCTTGTAGATTATTG+TGG 0.563250 1_3:-29277461 Msa0113370:intron
ATTACCTTTCCCAAAATAAG+GGG 0.563723 1_3:+29282049 None:intergenic
ATTATATTGAACTATATGCT+GGG 0.566919 1_3:+29277155 None:intergenic
TATTGCAACACATCTAATCC+AGG 0.567214 1_3:-29277537 Msa0113370:intron
GCTCAATCCCATCAGGGAGA+TGG 0.579834 1_3:-29286812 Msa0113370:intron
CACATGGTCTGAAGGGAGTG+GGG 0.579971 1_3:+29286834 None:intergenic
TCGTCATTGATTGTCATCTG+TGG 0.580301 1_3:-29277355 Msa0113370:three_prime_UTR
TGATCCCTGAGAAAAGCTTA+CGG 0.582266 1_3:+29279168 None:intergenic
TATTGAACTATATGCTGGGA+CGG 0.589004 1_3:+29277159 None:intergenic
ACGGCGGAGTGAGCATGGCG+AGG 0.591756 1_3:+29286881 None:intergenic
GAAACACATCATGCTGCACA+TGG 0.591773 1_3:-29277311 Msa0113370:three_prime_UTR
ATGCGTCGCAAAGACAATAC+CGG 0.593015 1_3:-29277418 Msa0113370:CDS
GATTGAGCACATGGTCTGAA+GGG 0.593925 1_3:+29286827 None:intergenic
GAGGATGAGTAAATGGGCGG+TGG 0.603068 1_3:+29286961 None:intergenic
AGTCTTTCAGTTATCTCTGG+TGG 0.603314 1_3:-29277860 Msa0113370:CDS
AAGTGGTGTTGCACTTACCC+AGG 0.603604 1_3:-29283799 Msa0113370:intron
TGCAACTAGTATGAGTGCGT+TGG 0.605826 1_3:+29277805 None:intergenic
GAAAAGCCAATAATGAGTGG+TGG 0.607193 1_3:+29277010 None:intergenic
AGACAATACCGGTAATGTCA+AGG 0.607934 1_3:-29277407 Msa0113370:CDS
TCGGAAACAATATGCTGGAA+CGG 0.611045 1_3:+29277196 None:intergenic
AAACCTGTAATAAATTCTTG+GGG 0.616241 1_3:+29284253 None:intergenic
ATTTGTAGCTCTGATTTCTG+CGG 0.616358 1_3:-29286266 Msa0113370:intron
TCAACAGCACAACCAAGACT+AGG 0.616632 1_3:+29286223 None:intergenic
TCAGAAAAGCCAATAATGAG+TGG 0.618598 1_3:+29277007 None:intergenic
GACGGACTGAAAATAAAGAT+CGG 0.620683 1_3:+29277177 None:intergenic
TCTCCAAATGCACCACAAAG+TGG 0.621477 1_3:+29277584 None:intergenic
GGATACAAGTGAGCAAGTCA+AGG 0.622980 1_3:-29278873 Msa0113370:CDS
CAGAGATAACTGAAAGACTC+CGG 0.625503 1_3:+29277864 None:intergenic
TTACCTTTCCCAAAATAAGG+GGG 0.625879 1_3:+29282050 None:intergenic
TTGGTGCAGCTGTAGAAGCA+TGG 0.632248 1_3:-29286017 Msa0113370:CDS
ATGGTCTGAAGGGAGTGGGG+AGG 0.632772 1_3:+29286837 None:intergenic
ATGCCAACTACATTATCAAG+TGG 0.643732 1_3:-29283816 Msa0113370:CDS
ATGTCAAGGTGGCTTAAGAG+AGG 0.643975 1_3:-29277393 Msa0113370:exon
AATTAAACAGAAACAATGAA+AGG 0.646372 1_3:+29276965 None:intergenic
CCATGTGCTCAATCCCATCA+GGG 0.654094 1_3:-29286818 Msa0113370:CDS
ATGAGGATGAATGCGGCGTG+AGG 0.678321 1_3:+29286942 None:intergenic
CGAGGGAATGAGGATGAATG+CGG 0.686185 1_3:+29286935 None:intergenic
CGTGAGGATGAGTAAATGGG+CGG 0.705388 1_3:+29286958 None:intergenic
CAATACCGGTAATGTCAAGG+TGG 0.719218 1_3:-29277404 Msa0113370:CDS
TAGAGTGAGGGATTTAACGG+CGG 0.742684 1_3:+29286865 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTAATTTAAGATAGA+AGG + chr1_3:29278441-29278460 None:intergenic 10.0%
!!! ATTAAATTTTAGTAATTGAA+CGG - chr1_3:29280418-29280437 Msa0113370:intron 10.0%
!!! AGTTTAAATTAATTTGTTAA+TGG - chr1_3:29283325-29283344 Msa0113370:intron 10.0%
!!! GTTTAAATTAATTTGTTAAT+GGG - chr1_3:29283326-29283345 Msa0113370:intron 10.0%
!!! TATTATTTCTATTATTAACT+CGG + chr1_3:29283640-29283659 None:intergenic 10.0%
!! AGTTAATAATAGAAATAATA+AGG - chr1_3:29283640-29283659 Msa0113370:intron 10.0%
!!! TATTTTAGATTTGATTAAAT+AGG - chr1_3:29284291-29284310 Msa0113370:CDS 10.0%
!!! ATTTTAGATTTGATTAAATA+GGG - chr1_3:29284292-29284311 Msa0113370:CDS 10.0%
!!! AATTTATTAATTGTTTGTTT+TGG - chr1_3:29285168-29285187 Msa0113370:intron 10.0%
!! AAATATATGAGAAACAAATA+GGG + chr1_3:29277239-29277258 None:intergenic 15.0%
!! AAATTTATGATCAGATTATA+GGG - chr1_3:29278047-29278066 Msa0113370:intron 15.0%
!! AAAGTAAAGAATAAAACATA+CGG + chr1_3:29278895-29278914 None:intergenic 15.0%
!!! ATCTTTTTAAATTGAAGAAA+TGG - chr1_3:29279771-29279790 Msa0113370:intron 15.0%
!! ATAAGCTATATAAAACTTAT+AGG + chr1_3:29280172-29280191 None:intergenic 15.0%
!! TCTATATTGATAGAAAATAT+TGG - chr1_3:29280458-29280477 Msa0113370:intron 15.0%
!! AAAATATTGTTTAGTACATT+TGG + chr1_3:29280978-29280997 None:intergenic 15.0%
!! AAAACAATAATAAGATTAGA+TGG + chr1_3:29281680-29281699 None:intergenic 15.0%
!! ATAATCCATAAAAATTGTAA+TGG + chr1_3:29282351-29282370 None:intergenic 15.0%
!! ATAATCCATAAAAATAGTAA+TGG + chr1_3:29282432-29282451 None:intergenic 15.0%
!!! AAGAGTCATTTTAAATAATA+TGG + chr1_3:29282542-29282561 None:intergenic 15.0%
!!! TTCATTTTATCAGAAATATA+TGG - chr1_3:29282661-29282680 Msa0113370:intron 15.0%
!! AAAAAATCCGTTAAATATTA+CGG + chr1_3:29283566-29283585 None:intergenic 15.0%
!!! AATATTTAACGGATTTTTTA+AGG - chr1_3:29283567-29283586 Msa0113370:intron 15.0%
!!! ATATTTAACGGATTTTTTAA+GGG - chr1_3:29283568-29283587 Msa0113370:intron 15.0%
!! TAACTGTATATATATGAATA+AGG + chr1_3:29284045-29284064 None:intergenic 15.0%
!!! TGATTAATTTTCTTTTTATG+TGG - chr1_3:29284241-29284260 Msa0113370:intron 15.0%
!!! ATTTTTTTGCTCTTTATTTA+AGG - chr1_3:29284541-29284560 Msa0113370:intron 15.0%
!! AAATATAATAATTCAAGAGA+AGG + chr1_3:29284776-29284795 None:intergenic 15.0%
!! TAATTAATGATTGATATTAG+AGG - chr1_3:29285386-29285405 Msa0113370:intron 15.0%
!! TTTCATATATGCATATAATT+TGG - chr1_3:29285808-29285827 Msa0113370:intron 15.0%
!! GAAATATATGAGAAACAAAT+AGG + chr1_3:29277240-29277259 None:intergenic 20.0%
!! CAAAAAATCATACCAAATTA+GGG + chr1_3:29277453-29277472 None:intergenic 20.0%
!! AAATATCATGTATCCAAAAT+TGG - chr1_3:29277685-29277704 Msa0113370:intron 20.0%
!! AATATCATGTATCCAAAATT+GGG - chr1_3:29277686-29277705 Msa0113370:intron 20.0%
!!! TGTTTTGATTTTATTACAAC+CGG - chr1_3:29277773-29277792 Msa0113370:intron 20.0%
!! CAAATTTATGATCAGATTAT+AGG - chr1_3:29278046-29278065 Msa0113370:intron 20.0%
!! ATAATATTAAGCAATGAAAC+GGG + chr1_3:29278239-29278258 None:intergenic 20.0%
!! GATAATATTAAGCAATGAAA+CGG + chr1_3:29278240-29278259 None:intergenic 20.0%
!!! TTTTTGATTTTTTAATCAGC+CGG - chr1_3:29278777-29278796 Msa0113370:intron 20.0%
!! ACATACGGTATATATAATTT+GGG + chr1_3:29278880-29278899 None:intergenic 20.0%
!! AACATACGGTATATATAATT+TGG + chr1_3:29278881-29278900 None:intergenic 20.0%
!!! TGTTTTATTCTTTACTTTTG+TGG - chr1_3:29278897-29278916 Msa0113370:intron 20.0%
!! ACTAGAATAAATAAACAACA+TGG - chr1_3:29279125-29279144 Msa0113370:intron 20.0%
!! ATCGATATTTGATAAAACAA+TGG + chr1_3:29279438-29279457 None:intergenic 20.0%
!! TAAACCTGTAATAAATTCTT+GGG + chr1_3:29279635-29279654 None:intergenic 20.0%
!! CTTCAATTTAAAAAGATCTA+AGG + chr1_3:29279768-29279787 None:intergenic 20.0%
!! AATAGAAATAAACACAGAAA+AGG + chr1_3:29280149-29280168 None:intergenic 20.0%
!! AAGTAAAACACTATCTAATT+AGG + chr1_3:29280642-29280661 None:intergenic 20.0%
!! CTTGAATGATTATAAAATAC+AGG - chr1_3:29280908-29280927 Msa0113370:intron 20.0%
!! TCTTAAAACACTTAAAAAAG+TGG - chr1_3:29281106-29281125 Msa0113370:intron 20.0%
!! TTATTTATACATGCACTATT+AGG - chr1_3:29281329-29281348 Msa0113370:intron 20.0%
!! AAAATCATGAGAATACAAAA+AGG + chr1_3:29281444-29281463 None:intergenic 20.0%
!! AAAAGATAGAAAAAGAAAGA+AGG + chr1_3:29281619-29281638 None:intergenic 20.0%
!!! AATTGATAGCTTAGTTTTTT+GGG + chr1_3:29282296-29282315 None:intergenic 20.0%
!! TCACTTATTGAACTTTAATT+TGG + chr1_3:29282506-29282525 None:intergenic 20.0%
!!! TTGATTGCATATATTGTTTT+TGG - chr1_3:29282593-29282612 Msa0113370:intron 20.0%
!!! ATATTTTTCATTGCTTTGAA+TGG - chr1_3:29282799-29282818 Msa0113370:intron 20.0%
!!! TATTTTTCATTGCTTTGAAT+GGG - chr1_3:29282800-29282819 Msa0113370:intron 20.0%
!! ATTATGTTCTTAAGAATTGA+GGG + chr1_3:29283107-29283126 None:intergenic 20.0%
!! TATTATGTTCTTAAGAATTG+AGG + chr1_3:29283108-29283127 None:intergenic 20.0%
!!! ATGGTCATAAATTTAAGATT+AGG + chr1_3:29283228-29283247 None:intergenic 20.0%
!!! AAGCACTTATATTTTTAAAG+AGG + chr1_3:29283256-29283275 None:intergenic 20.0%
!! AAAAATCCGTTAAATATTAC+GGG + chr1_3:29283565-29283584 None:intergenic 20.0%
!! AATGATAAGTATATGCATAA+AGG - chr1_3:29284168-29284187 Msa0113370:intron 20.0%
!!! AAGGTATTACTGAAAAATTA+TGG - chr1_3:29284958-29284977 Msa0113370:intron 20.0%
!! AACATAGTATGTAATTGAAA+AGG + chr1_3:29285497-29285516 None:intergenic 20.0%
!! AGTTAAACTTAAACATTTAC+AGG + chr1_3:29285527-29285546 None:intergenic 20.0%
!!! TAAGTTTAACTCTATTTTCA+TGG - chr1_3:29285536-29285555 Msa0113370:intron 20.0%
!!! AAGTTTAACTCTATTTTCAT+GGG - chr1_3:29285537-29285556 Msa0113370:intron 20.0%
!!! AGTTTTGTTTAATAATACTC+CGG - chr1_3:29285620-29285639 Msa0113370:intron 20.0%
!! ATATGCATATATGAAATGTA+AGG + chr1_3:29285804-29285823 None:intergenic 20.0%
!! TTTAATTGAATTAGTCACTA+TGG - chr1_3:29285900-29285919 Msa0113370:intron 20.0%
!! TTGAGAAAGTAATAAATAAC+TGG + chr1_3:29286123-29286142 None:intergenic 20.0%
!! TTAAAAATAAATCAATCACC+TGG + chr1_3:29286368-29286387 None:intergenic 20.0%
!! ATTATATTGAACTATATGCT+GGG + chr1_3:29286732-29286751 None:intergenic 20.0%
!!! ATAGTTCAATATAATGGATA+TGG - chr1_3:29286737-29286756 Msa0113370:intron 20.0%
!! AATTAAACAGAAACAATGAA+AGG + chr1_3:29286922-29286941 None:intergenic 20.0%
!!! TATTTTTTGTCTGAGACAAT+CGG + chr1_3:29277270-29277289 None:intergenic 25.0%
!!! GAATTCAATGACTTTAAAGT+AGG + chr1_3:29277426-29277445 None:intergenic 25.0%
! GCAAAAAATCATACCAAATT+AGG + chr1_3:29277454-29277473 None:intergenic 25.0%
! ATAATTGTGAGGACTAAATT+GGG - chr1_3:29277497-29277516 Msa0113370:intron 25.0%
! GAGATAACAAAAATTCCAAA+CGG + chr1_3:29277712-29277731 None:intergenic 25.0%
!!! TTTGGAATTTTTGTTATCTC+AGG - chr1_3:29277712-29277731 Msa0113370:intron 25.0%
!!! GTTTTGATTTTATTACAACC+GGG - chr1_3:29277774-29277793 Msa0113370:intron 25.0%
! TAAGTTAACAAAATTGAAGC+CGG + chr1_3:29278112-29278131 None:intergenic 25.0%
! AAACTTTGCAAAATCAGATT+TGG - chr1_3:29278389-29278408 Msa0113370:intron 25.0%
! AAATAGTGATACAGAGTAAT+TGG - chr1_3:29278562-29278581 Msa0113370:intron 25.0%
! AATTAAAATGTGCATGTGTT+AGG - chr1_3:29278673-29278692 Msa0113370:intron 25.0%
! ATTAAAATGTGCATGTGTTA+GGG - chr1_3:29278674-29278693 Msa0113370:intron 25.0%
! CATACGGTATATATAATTTG+GGG + chr1_3:29278879-29278898 None:intergenic 25.0%
! AAGATTCTTATTACGAACTT+TGG - chr1_3:29279333-29279352 Msa0113370:intron 25.0%
! AGATTCTTATTACGAACTTT+GGG - chr1_3:29279334-29279353 Msa0113370:intron 25.0%
!!! TGATCAATGGTTTTAAGATT+TGG - chr1_3:29279399-29279418 Msa0113370:intron 25.0%
! GATAAAACAATGGTTTAGAT+AGG + chr1_3:29279428-29279447 None:intergenic 25.0%
! AAACCTGTAATAAATTCTTG+GGG + chr1_3:29279634-29279653 None:intergenic 25.0%
! CTAAACCTGTAATAAATTCT+TGG + chr1_3:29279636-29279655 None:intergenic 25.0%
!!! TGACAAAAGTACTATGTAAA+TGG + chr1_3:29279696-29279715 None:intergenic 25.0%
! TATCATAATTCTTGGAAAGA+TGG - chr1_3:29279846-29279865 Msa0113370:intron 25.0%
!! AGAGAGAAAGATATTGTTTT+AGG + chr1_3:29279896-29279915 None:intergenic 25.0%
! ATCTTGAATTGCATGAAAAT+TGG + chr1_3:29280005-29280024 None:intergenic 25.0%
!! ATATTTTCTTGCTTTCTACA+GGG - chr1_3:29280027-29280046 Msa0113370:intron 25.0%
! AGAAAACATAATGATTACCT+GGG + chr1_3:29280105-29280124 None:intergenic 25.0%
! AAGAAAACATAATGATTACC+TGG + chr1_3:29280106-29280125 None:intergenic 25.0%
!!! ACAGTAATATCTAACTTGTT+AGG - chr1_3:29280286-29280305 Msa0113370:intron 25.0%
! CTAAAATTTAATCAGAGCAT+AGG + chr1_3:29280410-29280429 None:intergenic 25.0%
!!! ACTCTTGGTTTTTCTATATA+AGG + chr1_3:29280593-29280612 None:intergenic 25.0%
! TAAAAATGTGTTACAACTCT+TGG + chr1_3:29280608-29280627 None:intergenic 25.0%
!! AGAGTTGTAACACATTTTTA+AGG - chr1_3:29280608-29280627 Msa0113370:intron 25.0%
! AAAAGTAATTGTGAGCAATT+AGG - chr1_3:29280773-29280792 Msa0113370:intron 25.0%
! ATATACAAAGATCAAGTAGT+AGG + chr1_3:29280818-29280837 None:intergenic 25.0%
! TATACTAGTAAAATGAGCTA+AGG - chr1_3:29281131-29281150 Msa0113370:intron 25.0%
!!! TAATGTTTGATTTGATCGAT+CGG + chr1_3:29281198-29281217 None:intergenic 25.0%
!!! ATTAGGTTATTTTATCCTAC+TGG - chr1_3:29281346-29281365 Msa0113370:intron 25.0%
!!! TTAGGTTATTTTATCCTACT+GGG - chr1_3:29281347-29281366 Msa0113370:intron 25.0%
!!! TGCTTTTTATTTATAGACAC+AGG - chr1_3:29281391-29281410 Msa0113370:intron 25.0%
!!! GCTTTTTATTTATAGACACA+GGG - chr1_3:29281392-29281411 Msa0113370:intron 25.0%
! GAAGATATAACATGTATACA+AGG + chr1_3:29281515-29281534 None:intergenic 25.0%
!!! ACAAATTTTGTGATGGAAAA+TGG + chr1_3:29281745-29281764 None:intergenic 25.0%
!! AAGACTTTTAAATAACTGCT+TGG + chr1_3:29281797-29281816 None:intergenic 25.0%
!!! ATATTAATCCCCCTTATTTT+GGG - chr1_3:29281826-29281845 Msa0113370:intron 25.0%
! AATTACCTTTCCCAAAATAA+GGG + chr1_3:29281839-29281858 None:intergenic 25.0%
! TAGGTTTCTTTATGTTTATG+AGG - chr1_3:29281945-29281964 Msa0113370:intron 25.0%
! TGAATTTCATCAAAAGGTTT+GGG + chr1_3:29282185-29282204 None:intergenic 25.0%
! TAAGTGTGAATTTCATCAAA+AGG + chr1_3:29282191-29282210 None:intergenic 25.0%
!!! CAATTGATAGCTTAGTTTTT+TGG + chr1_3:29282297-29282316 None:intergenic 25.0%
! ATCCATAAAAATTGTAATGG+AGG + chr1_3:29282348-29282367 None:intergenic 25.0%
!!! TACCACCATTACTATTTTTA+TGG - chr1_3:29282424-29282443 Msa0113370:intron 25.0%
! ATCCATAAAAATAGTAATGG+TGG + chr1_3:29282429-29282448 None:intergenic 25.0%
!! TATGGATTATAGCAAGTAAT+AGG - chr1_3:29282442-29282461 Msa0113370:intron 25.0%
! AAGTAATAGGCAATATGATT+GGG - chr1_3:29282455-29282474 Msa0113370:intron 25.0%
! AAATAATATGGCCAGTAAAT+TGG + chr1_3:29282530-29282549 None:intergenic 25.0%
! ATGATGCAACTAAATCAATT+TGG + chr1_3:29282641-29282660 None:intergenic 25.0%
!! AACAGTTTAAATTTTGTCTG+AGG - chr1_3:29282728-29282747 Msa0113370:intron 25.0%
! AAAGCAGTATACAATAGTTA+TGG - chr1_3:29282990-29283009 Msa0113370:intron 25.0%
! AAGCAGTATACAATAGTTAT+GGG - chr1_3:29282991-29283010 Msa0113370:intron 25.0%
! GGAAATAATTACAAGTGAAA+TGG + chr1_3:29283041-29283060 None:intergenic 25.0%
! TAATATAGATGTCAAGTGAA+AGG - chr1_3:29283159-29283178 Msa0113370:intron 25.0%
!!! TATTTTTAAAGAGGCATCTA+TGG + chr1_3:29283247-29283266 None:intergenic 25.0%
!!! ATTAAGTTGGCTAATTAGTT+TGG - chr1_3:29283614-29283633 Msa0113370:CDS 25.0%
! AATAGAAATAATAAGGCACA+TGG - chr1_3:29283647-29283666 Msa0113370:intron 25.0%
!! AATCTCTCTTCCTTATTTAT+AGG + chr1_3:29283673-29283692 None:intergenic 25.0%
! ATAAATAAGGAAGAGAGATT+AGG - chr1_3:29283673-29283692 Msa0113370:intron 25.0%
! TAAATAAGGAAGAGAGATTA+GGG - chr1_3:29283674-29283693 Msa0113370:intron 25.0%
! TTAATCATTCATCCATCATT+CGG - chr1_3:29283785-29283804 Msa0113370:intron 25.0%
!! TCTCATCTAAAATACACTAA+AGG - chr1_3:29283808-29283827 Msa0113370:CDS 25.0%
!! GATTTTTCACATTGTAAACT+GGG - chr1_3:29283915-29283934 Msa0113370:intron 25.0%
! TAGTCTAGAAGAAGAATTAA+GGG + chr1_3:29283946-29283965 None:intergenic 25.0%
! TTGACTGTATATCTATATAC+GGG + chr1_3:29284108-29284127 None:intergenic 25.0%
! GTTGACTGTATATCTATATA+CGG + chr1_3:29284109-29284128 None:intergenic 25.0%
! TATATGCATAAAGGAATGTT+GGG - chr1_3:29284177-29284196 Msa0113370:intron 25.0%
! AAAGAAAATTAATCAGCTCA+AGG + chr1_3:29284236-29284255 None:intergenic 25.0%
!! ATTTTCTTTTTATGTGGAGT+TGG - chr1_3:29284247-29284266 Msa0113370:intron 25.0%
! ATTTACATATACATGCAGTA+GGG + chr1_3:29284364-29284383 None:intergenic 25.0%
! TATTTACATATACATGCAGT+AGG + chr1_3:29284365-29284384 None:intergenic 25.0%
!!! TAATTTGTTCTTTCACTTAC+TGG + chr1_3:29284390-29284409 None:intergenic 25.0%
!! ACCTGTTTTATGTCTTTTTT+TGG - chr1_3:29284459-29284478 Msa0113370:intron 25.0%
!! CCTGTTTTATGTCTTTTTTT+GGG - chr1_3:29284460-29284479 Msa0113370:intron 25.0%
! ATAGCTACAAGAAAAACTTT+GGG + chr1_3:29285058-29285077 None:intergenic 25.0%
! AATAGCTACAAGAAAAACTT+TGG + chr1_3:29285059-29285078 None:intergenic 25.0%
!! AAAGTTTTTCTTGTAGCTAT+TGG - chr1_3:29285058-29285077 Msa0113370:intron 25.0%
! GTATGTAATTGAAAAGGATT+TGG + chr1_3:29285491-29285510 None:intergenic 25.0%
!! AGTTTAACTCTATTTTCATG+GGG - chr1_3:29285538-29285557 Msa0113370:intron 25.0%
! AAGATATGAAAACATGTGTT+TGG + chr1_3:29286243-29286262 None:intergenic 25.0%
! CATTATATTGAACTATATGC+TGG + chr1_3:29286733-29286752 None:intergenic 25.0%
! CAGCATATAGTTCAATATAA+TGG - chr1_3:29286731-29286750 Msa0113370:intron 25.0%
! TTACATGATTACTTGGTATA+AGG + chr1_3:29286819-29286838 None:intergenic 25.0%
!! AAAAGCATTGATATAGAGAG+AGG + chr1_3:29277187-29277206 None:intergenic 30.0%
TGTTTCTCATATATTTCTCG+CGG - chr1_3:29277243-29277262 Msa0113370:three_prime_UTR 30.0%
!!! ATTTTTTGTCTGAGACAATC+GGG + chr1_3:29277269-29277288 None:intergenic 30.0%
GAAAATGTCAGAGACTAATT+TGG + chr1_3:29277296-29277315 None:intergenic 30.0%
! ACTCATAACAAATTAGTCTC+CGG - chr1_3:29277318-29277337 Msa0113370:three_prime_UTR 30.0%
!! AATTTGTTATGGAAGTACGA+GGG - chr1_3:29277344-29277363 Msa0113370:three_prime_UTR 30.0%
TTGAATTCCAATCCCTAATT+TGG - chr1_3:29277438-29277457 Msa0113370:CDS 30.0%
AATCATACCAAATTAGGGAT+TGG + chr1_3:29277448-29277467 None:intergenic 30.0%
!!! TTTTTTGCCAATGTCTAAGT+TGG - chr1_3:29277466-29277485 Msa0113370:intron 30.0%
! TTTTTGCCAATGTCTAAGTT+GGG - chr1_3:29277467-29277486 Msa0113370:intron 30.0%
GATAATTGTGAGGACTAAAT+TGG - chr1_3:29277496-29277515 Msa0113370:intron 30.0%
TTCATTTGATTATGCTGTGA+GGG - chr1_3:29277559-29277578 Msa0113370:CDS 30.0%
TTGTTATCTCAGGTTAATGT+TGG - chr1_3:29277722-29277741 Msa0113370:intron 30.0%
ACAAATAGATGCGAAAGATT+AGG + chr1_3:29277750-29277769 None:intergenic 30.0%
ATCAAAATCTGAAAAGTGGT+TGG + chr1_3:29278214-29278233 None:intergenic 30.0%
GGTTATCAAAATCTGAAAAG+TGG + chr1_3:29278218-29278237 None:intergenic 30.0%
!! ATCAAAATCCAGAAAGTGTT+TGG + chr1_3:29278352-29278371 None:intergenic 30.0%
!!! CAAAGTTTTTAGCAGAAATC+AGG + chr1_3:29278377-29278396 None:intergenic 30.0%
! AATGAGTTTTCATCTTGTGT+TGG + chr1_3:29278489-29278508 None:intergenic 30.0%
AAAGCTTGAATCTCTAACTT+AGG - chr1_3:29278648-29278667 Msa0113370:intron 30.0%
TACTACACTAGGTAATTAAC+CGG + chr1_3:29278799-29278818 None:intergenic 30.0%
TTCCTAAAACACAGATTCTA+TGG - chr1_3:29279055-29279074 Msa0113370:intron 30.0%
! TTCCATAGAATCTGTGTTTT+AGG + chr1_3:29279060-29279079 None:intergenic 30.0%
AACACAGATTCTATGGAAAT+AGG - chr1_3:29279062-29279081 Msa0113370:intron 30.0%
TTCTATGGAAATAGGAACAT+AGG - chr1_3:29279070-29279089 Msa0113370:intron 30.0%
TCTATGGAAATAGGAACATA+GGG - chr1_3:29279071-29279090 Msa0113370:intron 30.0%
! GGTGAATATTCTGATAGTTT+TGG + chr1_3:29279206-29279225 None:intergenic 30.0%
AGCAATGTATCATGTATACT+GGG + chr1_3:29279227-29279246 None:intergenic 30.0%
!!! AGATGGATGTTTTAAAGAGA+AGG + chr1_3:29279360-29279379 None:intergenic 30.0%
!! TCTTTAAAACATCCATCTCT+TGG - chr1_3:29279362-29279381 Msa0113370:intron 30.0%
TTCACATGACTATTGATCAA+TGG - chr1_3:29279386-29279405 Msa0113370:intron 30.0%
! TGTTCTTTTGTTCTTTTTGC+AGG - chr1_3:29279549-29279568 Msa0113370:intron 30.0%
AATATTACCCTGGAAAAGTA+TGG + chr1_3:29279595-29279614 None:intergenic 30.0%
CTGAATTTGTAATATTACCC+TGG + chr1_3:29279605-29279624 None:intergenic 30.0%
TGCTTAGAGTAGAATGTAAA+TGG + chr1_3:29279659-29279678 None:intergenic 30.0%
GGTCAGAAATTTATCAATGA+GGG + chr1_3:29279747-29279766 None:intergenic 30.0%
AGGTCAGAAATTTATCAATG+AGG + chr1_3:29279748-29279767 None:intergenic 30.0%
TTCCAAGAATTATGATAGCA+CGG + chr1_3:29279843-29279862 None:intergenic 30.0%
CATGTATTGCAAATATCCAA+CGG - chr1_3:29279928-29279947 Msa0113370:intron 30.0%
AATTAAATACCATAAGCCGT+TGG + chr1_3:29279947-29279966 None:intergenic 30.0%
! CATATTTTCTTGCTTTCTAC+AGG - chr1_3:29280026-29280045 Msa0113370:intron 30.0%
TTACTTGATCAACTAGTGTT+TGG - chr1_3:29280656-29280675 Msa0113370:intron 30.0%
TCAACTAGTGTTTGGATTTA+TGG - chr1_3:29280664-29280683 Msa0113370:intron 30.0%
AATCATTCAAGCAATACTCA+AGG + chr1_3:29280899-29280918 None:intergenic 30.0%
!! CATTAGAGTTTTATACAGCT+TGG - chr1_3:29281213-29281232 Msa0113370:intron 30.0%
TAACTCTCAAACTCTAATAG+TGG + chr1_3:29281312-29281331 None:intergenic 30.0%
! ACTAGCTACAAATTTTGTGA+TGG + chr1_3:29281752-29281771 None:intergenic 30.0%
ATCACAAAATTTGTAGCTAG+TGG - chr1_3:29281751-29281770 Msa0113370:intron 30.0%
! CTTTTAAATAACTGCTTGGT+GGG + chr1_3:29281793-29281812 None:intergenic 30.0%
! ACTTTTAAATAACTGCTTGG+TGG + chr1_3:29281794-29281813 None:intergenic 30.0%
CAAAATAAGGGGGATTAATA+TGG + chr1_3:29281827-29281846 None:intergenic 30.0%
!! CATATTAATCCCCCTTATTT+TGG - chr1_3:29281825-29281844 Msa0113370:intron 30.0%
ATTACCTTTCCCAAAATAAG+GGG + chr1_3:29281838-29281857 None:intergenic 30.0%
CAATTACCTTTCCCAAAATA+AGG + chr1_3:29281840-29281859 None:intergenic 30.0%
! TGATTTTTGCAACTATGATG+TGG - chr1_3:29281995-29282014 Msa0113370:intron 30.0%
GTGAATTTCATCAAAAGGTT+TGG + chr1_3:29282186-29282205 None:intergenic 30.0%
! ATCAATTGAAAGCACATTGA+TGG - chr1_3:29282309-29282328 Msa0113370:intron 30.0%
! AAAAATTGTAATGGAGGTGT+TGG + chr1_3:29282342-29282361 None:intergenic 30.0%
! CACCTCCATTACAATTTTTA+TGG - chr1_3:29282343-29282362 Msa0113370:intron 30.0%
AGCTATTATGTGAAAGCAAA+TGG - chr1_3:29282386-29282405 Msa0113370:intron 30.0%
CAAGTAATAGGCAATATGAT+TGG - chr1_3:29282454-29282473 Msa0113370:intron 30.0%
ATATATGGAGTTGTAAACCT+TGG - chr1_3:29282676-29282695 Msa0113370:intron 30.0%
! GTTCTACGTGAATCTTTTAA+AGG - chr1_3:29282826-29282845 Msa0113370:intron 30.0%
CTCAAACAAGCATAGAAAAT+AGG + chr1_3:29282857-29282876 None:intergenic 30.0%
! CAACAAAGACTTCTAGAAAA+CGG + chr1_3:29282969-29282988 None:intergenic 30.0%
CACTTGACATCTATATTACA+TGG + chr1_3:29283157-29283176 None:intergenic 30.0%
!! TTTGTTAATGGGTTAGTTAG+TGG - chr1_3:29283337-29283356 Msa0113370:intron 30.0%
!! TTGTTAATGGGTTAGTTAGT+GGG - chr1_3:29283338-29283357 Msa0113370:intron 30.0%
CGAATACCCGTAATATTTAA+CGG - chr1_3:29283556-29283575 Msa0113370:intron 30.0%
!!! CGGATTTTTTAAGGGTATAT+TGG - chr1_3:29283576-29283595 Msa0113370:intron 30.0%
ATTCCAAAGAGAGATTAAGT+TGG - chr1_3:29283601-29283620 Msa0113370:CDS 30.0%
AAATAAGGAAGAGAGATTAG+GGG - chr1_3:29283675-29283694 Msa0113370:intron 30.0%
TCCAAAGTCTTGAATACTTT+GGG - chr1_3:29283893-29283912 Msa0113370:intron 30.0%
! GGATTTTTCACATTGTAAAC+TGG - chr1_3:29283914-29283933 Msa0113370:intron 30.0%
CTAGTCTAGAAGAAGAATTA+AGG + chr1_3:29283947-29283966 None:intergenic 30.0%
ATATATATGAATAAGGCCGA+GGG + chr1_3:29284038-29284057 None:intergenic 30.0%
TATATATATGAATAAGGCCG+AGG + chr1_3:29284039-29284058 None:intergenic 30.0%
GTATATGCATAAAGGAATGT+TGG - chr1_3:29284176-29284195 Msa0113370:intron 30.0%
ATTAGAATTGTTTGTGCTCA+TGG - chr1_3:29284406-29284425 Msa0113370:intron 30.0%
AACAGGTTTACCAATAACAA+GGG + chr1_3:29284446-29284465 None:intergenic 30.0%
AAACAGGTTTACCAATAACA+AGG + chr1_3:29284447-29284466 None:intergenic 30.0%
CCCAAAAAAAGACATAAAAC+AGG + chr1_3:29284463-29284482 None:intergenic 30.0%
TTATTTGCCTGACATATACT+AGG - chr1_3:29284512-29284531 Msa0113370:intron 30.0%
CGTTAAACATGAGTTGTAAT+AGG - chr1_3:29284832-29284851 Msa0113370:intron 30.0%
! GCTTCAGTATTTTATCATCA+AGG - chr1_3:29284939-29284958 Msa0113370:intron 30.0%
TTAATCAAATATCATCCTGC+AGG - chr1_3:29284982-29285001 Msa0113370:intron 30.0%
!! GCTTGAGTTTGTTTACATTT+TGG - chr1_3:29285103-29285122 Msa0113370:intron 30.0%
GTAGAATGAAATGCATAGTA+TGG + chr1_3:29285235-29285254 None:intergenic 30.0%
TAGTTGATCAAAATGTGTGA+TGG - chr1_3:29285261-29285280 Msa0113370:intron 30.0%
!!! GTGCTGTCATTTTTTACATA+CGG - chr1_3:29285296-29285315 Msa0113370:intron 30.0%
ATTTCAACAAGCTTGTGATT+TGG + chr1_3:29285421-29285440 None:intergenic 30.0%
! GTTTAACTCTATTTTCATGG+GGG - chr1_3:29285539-29285558 Msa0113370:intron 30.0%
AATTACGTCAAAGAAAAGAC+CGG + chr1_3:29285642-29285661 None:intergenic 30.0%
TCTTTGACGTAATTTACTAC+AGG - chr1_3:29285648-29285667 Msa0113370:intron 30.0%
!! GAATTATGTTGGTAATCAGA+GGG + chr1_3:29285844-29285863 None:intergenic 30.0%
CTTTCTCTAACGAATTATGT+TGG + chr1_3:29285855-29285874 None:intergenic 30.0%
!! TTCGTTAGAGAAAGTATTTG+AGG - chr1_3:29285861-29285880 Msa0113370:intron 30.0%
!! TCGTTAGAGAAAGTATTTGA+GGG - chr1_3:29285862-29285881 Msa0113370:intron 30.0%
!!! CTATGGATTCGTTGTTTTAA+TGG - chr1_3:29285917-29285936 Msa0113370:intron 30.0%
!!! ATTCGTTGTTTTAATGGACA+TGG - chr1_3:29285923-29285942 Msa0113370:intron 30.0%
AACGCTATTGAATACCAATA+AGG + chr1_3:29285995-29286014 None:intergenic 30.0%
TTGGAGATAAGATCAAATGA+AGG + chr1_3:29286224-29286243 None:intergenic 30.0%
TCAGAAAACATTACCAGTAA+TGG - chr1_3:29286263-29286282 Msa0113370:intron 30.0%
ATTAGATGTGTTGCAATACA+AGG + chr1_3:29286345-29286364 None:intergenic 30.0%
! ACAATAATCTACAAGGTGTT+CGG + chr1_3:29286424-29286443 None:intergenic 30.0%
!! AAGAGTGTTAACAATTTGCT+TGG - chr1_3:29286600-29286619 Msa0113370:intron 30.0%
!! ATACTAATTTTGGCAACTCA+TGG + chr1_3:29286640-29286659 None:intergenic 30.0%
!! GTACAAGAGCATACTAATTT+TGG + chr1_3:29286650-29286669 None:intergenic 30.0%
CTCTGATTTCTATTCACTTA+TGG - chr1_3:29286770-29286789 Msa0113370:intron 30.0%
TGATTTCTATTCACTTATGG+TGG - chr1_3:29286773-29286792 Msa0113370:intron 30.0%
ACTTCCATAACAAATTGGTC+CGG + chr1_3:29277340-29277359 None:intergenic 35.0%
CTCGTACTTCCATAACAAAT+TGG + chr1_3:29277345-29277364 None:intergenic 35.0%
!! CAATTTGTTATGGAAGTACG+AGG - chr1_3:29277343-29277362 Msa0113370:three_prime_UTR 35.0%
GAAGTACGAGGGAATAATTT+GGG - chr1_3:29277355-29277374 Msa0113370:three_prime_UTR 35.0%
AAGTACGAGGGAATAATTTG+GGG - chr1_3:29277356-29277375 Msa0113370:three_prime_UTR 35.0%
ATTGGGATTCAACGACTTTA+GGG - chr1_3:29277379-29277398 Msa0113370:three_prime_UTR 35.0%
TAGTCCTCACAATTATCTTG+TGG + chr1_3:29277493-29277512 None:intergenic 35.0%
CTTCATTTGATTATGCTGTG+AGG - chr1_3:29277558-29277577 Msa0113370:CDS 35.0%
TGTGAGGGATAATTTAACAG+TGG - chr1_3:29277574-29277593 Msa0113370:CDS 35.0%
!! ATTTGTAGCTCTGATTTCTG+CGG - chr1_3:29277618-29277637 Msa0113370:CDS 35.0%
AGAACATTCACTTAGATACC+CGG + chr1_3:29277795-29277814 None:intergenic 35.0%
GGTATCTAAGTGAATGTTCT+GGG - chr1_3:29277795-29277814 Msa0113370:intron 35.0%
ATTTATAGACCGCTTCACTA+TGG - chr1_3:29277935-29277954 Msa0113370:intron 35.0%
ATTATAGGGTCCCTCTATTA+TGG - chr1_3:29278061-29278080 Msa0113370:intron 35.0%
TAACTGATACAAGACAGCTT+CGG + chr1_3:29278277-29278296 None:intergenic 35.0%
GATCATATCCAAACACTTTC+TGG - chr1_3:29278341-29278360 Msa0113370:intron 35.0%
GGTTAATTACCTAGTGTAGT+AGG - chr1_3:29278798-29278817 Msa0113370:intron 35.0%
TTAGTTCAACCTACTACACT+AGG + chr1_3:29278810-29278829 None:intergenic 35.0%
! GTGTAGTAGGTTGAACTAAA+AGG - chr1_3:29278811-29278830 Msa0113370:intron 35.0%
AATATGCACCCTTTGCAAAA+AGG + chr1_3:29278849-29278868 None:intergenic 35.0%
! TTTGCAAAGGGTGCATATTA+AGG - chr1_3:29278850-29278869 Msa0113370:CDS 35.0%
! TTGCAAAGGGTGCATATTAA+GGG - chr1_3:29278851-29278870 Msa0113370:CDS 35.0%
! CTACTAAGCTTTATCATGCT+AGG - chr1_3:29278995-29279014 Msa0113370:intron 35.0%
! TAAGCTTTATCATGCTAGGT+GGG - chr1_3:29278999-29279018 Msa0113370:intron 35.0%
CTATGGAAATAGGAACATAG+GGG - chr1_3:29279072-29279091 Msa0113370:intron 35.0%
TATGGAAATAGGAACATAGG+GGG - chr1_3:29279073-29279092 Msa0113370:intron 35.0%
CAGCAATGTATCATGTATAC+TGG + chr1_3:29279228-29279247 None:intergenic 35.0%
AGTCATACATGCTGAAAGTA+GGG + chr1_3:29279311-29279330 None:intergenic 35.0%
AAGTCATACATGCTGAAAGT+AGG + chr1_3:29279312-29279331 None:intergenic 35.0%
! TTCTTACACCATACTTTTCC+AGG - chr1_3:29279584-29279603 Msa0113370:intron 35.0%
! TCTTACACCATACTTTTCCA+GGG - chr1_3:29279585-29279604 Msa0113370:intron 35.0%
CTGTAATAAATTCTTGGGGT+TGG + chr1_3:29279630-29279649 None:intergenic 35.0%
CAACCCCAAGAATTTATTAC+AGG - chr1_3:29279628-29279647 Msa0113370:intron 35.0%
GGTAGTAAGATATAGAGAGA+TGG + chr1_3:29279811-29279830 None:intergenic 35.0%
AGTTGGCATACAGCAAAATA+TGG + chr1_3:29280057-29280076 None:intergenic 35.0%
ATGCCAACTACATTATCAAG+TGG - chr1_3:29280068-29280087 Msa0113370:intron 35.0%
!! ACACCACTTGATAATGTAGT+TGG + chr1_3:29280074-29280093 None:intergenic 35.0%
! CCACTCTTAAGTTTTTCTGT+AGG + chr1_3:29280486-29280505 None:intergenic 35.0%
CCTACAGAAAAACTTAAGAG+TGG - chr1_3:29280483-29280502 Msa0113370:intron 35.0%
GAATCTTCTCGTAATCTTTG+CGG - chr1_3:29280540-29280559 Msa0113370:intron 35.0%
!! GAGTAATAAGGAAGTGTTAG+AGG + chr1_3:29280724-29280743 None:intergenic 35.0%
GTTTCTTAGTCATTGCCATT+AGG - chr1_3:29280930-29280949 Msa0113370:intron 35.0%
AGTCATTGCCATTAGGATTA+TGG - chr1_3:29280937-29280956 Msa0113370:intron 35.0%
AGTACATTTGGAAAGAATCC+TGG + chr1_3:29280966-29280985 None:intergenic 35.0%
! ACGTTTGGATGTTTGTTAAC+TGG + chr1_3:29281011-29281030 None:intergenic 35.0%
GCACAAAAAAATTGTCACTC+TGG + chr1_3:29281081-29281100 None:intergenic 35.0%
!!! AGTGACAATTTTTTTGTGCG+TGG - chr1_3:29281082-29281101 Msa0113370:intron 35.0%
GAATCAGCTACAAACTGATA+AGG - chr1_3:29281153-29281172 Msa0113370:intron 35.0%
TATACAGCTTGGAAACTGTT+AGG - chr1_3:29281224-29281243 Msa0113370:intron 35.0%
!! AATTTCCAGCTTTTCAAGCT+AGG - chr1_3:29281282-29281301 Msa0113370:intron 35.0%
AAAGATAGTTTCTTCCCAGT+AGG + chr1_3:29281364-29281383 None:intergenic 35.0%
CAAGTTCCTATCATTTCAAC+TGG - chr1_3:29281572-29281591 Msa0113370:intron 35.0%
TCCTATCATTTCAACTGGTT+TGG - chr1_3:29281577-29281596 Msa0113370:intron 35.0%
ACCAAACCAGTTGAAATGAT+AGG + chr1_3:29281581-29281600 None:intergenic 35.0%
AAATTTGTAGCTAGTGGAGT+TGG - chr1_3:29281757-29281776 Msa0113370:intron 35.0%
TTACCTTTCCCAAAATAAGG+GGG + chr1_3:29281837-29281856 None:intergenic 35.0%
CATGAGTCATCTCAAAAGTT+AGG - chr1_3:29282065-29282084 Msa0113370:CDS 35.0%
AAAGAGTTCTTGCATAAGTG+GGG + chr1_3:29282130-29282149 None:intergenic 35.0%
CAAAGAGTTCTTGCATAAGT+GGG + chr1_3:29282131-29282150 None:intergenic 35.0%
CACTTATGCAAGAACTCTTT+GGG - chr1_3:29282130-29282149 Msa0113370:CDS 35.0%
CAATAAGTGAGCCAATTTAC+TGG - chr1_3:29282516-29282535 Msa0113370:intron 35.0%
AAAGAAGAAAGTAGCAAGGT+AGG + chr1_3:29282572-29282591 None:intergenic 35.0%
CAAGAAAGAAGAAAGTAGCA+AGG + chr1_3:29282576-29282595 None:intergenic 35.0%
AGAAATGCAAACTACAACCA+AGG + chr1_3:29282696-29282715 None:intergenic 35.0%
TGACACAATGGTCAAATATG+AGG + chr1_3:29283062-29283081 None:intergenic 35.0%
AATTTCCAAGAGACGTTGAT+AGG - chr1_3:29283283-29283302 Msa0113370:intron 35.0%
TCAACATCACATTCTCGTTT+GGG - chr1_3:29283483-29283502 Msa0113370:intron 35.0%
CTAATCACATACGCAAACAT+GGG + chr1_3:29283516-29283535 None:intergenic 35.0%
CATGTTTGCGTATGTGATTA+GGG - chr1_3:29283515-29283534 Msa0113370:intron 35.0%
TAGCCAACTTAATCTCTCTT+TGG + chr1_3:29283607-29283626 None:intergenic 35.0%
AATAAGGAAGAGAGATTAGG+GGG - chr1_3:29283676-29283695 Msa0113370:intron 35.0%
ACAAAGAAACCAAAGACCAA+TGG + chr1_3:29283714-29283733 None:intergenic 35.0%
! TTTTAGATGAGACCGAATGA+TGG + chr1_3:29283800-29283819 None:intergenic 35.0%
GTCCAAAGTCTTGAATACTT+TGG - chr1_3:29283892-29283911 Msa0113370:intron 35.0%
! TCCCAAAGTATTCAAGACTT+TGG + chr1_3:29283897-29283916 None:intergenic 35.0%
TATATATGAATAAGGCCGAG+GGG + chr1_3:29284037-29284056 None:intergenic 35.0%
ATCTATATACGGGATGGTAA+AGG + chr1_3:29284098-29284117 None:intergenic 35.0%
CTGTATATCTATATACGGGA+TGG + chr1_3:29284104-29284123 None:intergenic 35.0%
ACCAGAAAGTTTGTACGTTA+AGG + chr1_3:29284134-29284153 None:intergenic 35.0%
TCGTATCATCACATTCACAA+TGG + chr1_3:29284333-29284352 None:intergenic 35.0%
! TATACCTTTGCCCTTGTTAT+TGG - chr1_3:29284433-29284452 Msa0113370:intron 35.0%
TTTACCAATAACAAGGGCAA+AGG + chr1_3:29284440-29284459 None:intergenic 35.0%
TTAGACTCCTAGTATATGTC+AGG + chr1_3:29284522-29284541 None:intergenic 35.0%
ATGTAGTCAAGTCTATGTAG+TGG - chr1_3:29284877-29284896 Msa0113370:intron 35.0%
TGTAGTCAAGTCTATGTAGT+GGG - chr1_3:29284878-29284897 Msa0113370:intron 35.0%
! TTTTCTTGTAGCTATTGGAC+TGG - chr1_3:29285063-29285082 Msa0113370:intron 35.0%
TTTCTTGTAGCTATTGGACT+GGG - chr1_3:29285064-29285083 Msa0113370:intron 35.0%
ATGTAAAAAATGACAGCACC+AGG + chr1_3:29285295-29285314 None:intergenic 35.0%
! CTACAGGATGCTATTTAGTT+AGG - chr1_3:29285664-29285683 Msa0113370:intron 35.0%
GTAAGGAACACAAAATCTGA+AGG + chr1_3:29285787-29285806 None:intergenic 35.0%
! ATGCATATAATTTGGAGCCA+TGG - chr1_3:29285816-29285835 Msa0113370:intron 35.0%
! TGCATATAATTTGGAGCCAT+GGG - chr1_3:29285817-29285836 Msa0113370:intron 35.0%
!! CGAATTATGTTGGTAATCAG+AGG + chr1_3:29285845-29285864 None:intergenic 35.0%
!! CGTTAGAGAAAGTATTTGAG+GGG - chr1_3:29285863-29285882 Msa0113370:intron 35.0%
ACTTCTTCATGTGACCTTAT+TGG - chr1_3:29285978-29285997 Msa0113370:intron 35.0%
CAGACTGAAACTACTTTCAT+AGG + chr1_3:29286155-29286174 None:intergenic 35.0%
AACATTACCAGTAATGGTTG+CGG - chr1_3:29286269-29286288 Msa0113370:intron 35.0%
TATTGCAACACATCTAATCC+AGG - chr1_3:29286347-29286366 Msa0113370:intron 35.0%
! CAATAATCTACAAGGTGTTC+GGG + chr1_3:29286423-29286442 None:intergenic 35.0%
GAACACCTTGTAGATTATTG+TGG - chr1_3:29286423-29286442 Msa0113370:intron 35.0%
AGAGTCCACAATAATCTACA+AGG + chr1_3:29286431-29286450 None:intergenic 35.0%
CTCTTGTACATTGTTCATTC+TGG - chr1_3:29286661-29286680 Msa0113370:intron 35.0%
AAAGATCGGAAACAATATGC+TGG + chr1_3:29286696-29286715 None:intergenic 35.0%
!! GACGGACTGAAAATAAAGAT+CGG + chr1_3:29286710-29286729 None:intergenic 35.0%
TATTGAACTATATGCTGGGA+CGG + chr1_3:29286728-29286747 None:intergenic 35.0%
!!! TGGCCATTTTTAAGAGTACA+GGG + chr1_3:29286848-29286867 None:intergenic 35.0%
!!! TTGGCCATTTTTAAGAGTAC+AGG + chr1_3:29286849-29286868 None:intergenic 35.0%
TCAGAAAAGCCAATAATGAG+TGG + chr1_3:29286880-29286899 None:intergenic 35.0%
AGTGGAAGCAAAGAGTCAAA+AGG - chr1_3:29277102-29277121 Msa0113370:three_prime_UTR 40.0%
AGAGTCAAAAGGATTGAGCT+TGG - chr1_3:29277113-29277132 Msa0113370:three_prime_UTR 40.0%
! AACCCATTTTGAGCTTTGCT+AGG - chr1_3:29277139-29277158 Msa0113370:three_prime_UTR 40.0%
! ACCCATTTTGAGCTTTGCTA+GGG - chr1_3:29277140-29277159 Msa0113370:three_prime_UTR 40.0%
! GGAAGTACGAGGGAATAATT+TGG - chr1_3:29277354-29277373 Msa0113370:three_prime_UTR 40.0%
GAGGGAATAATTTGGGGATT+GGG - chr1_3:29277362-29277381 Msa0113370:three_prime_UTR 40.0%
GATTGGGATTCAACGACTTT+AGG - chr1_3:29277378-29277397 Msa0113370:three_prime_UTR 40.0%
GGATTAACATGTCCTAGTCT+TGG - chr1_3:29277649-29277668 Msa0113370:intron 40.0%
! AATTCCAAACGGCCCAATTT+TGG + chr1_3:29277701-29277720 None:intergenic 40.0%
GGGTATCTAAGTGAATGTTC+TGG - chr1_3:29277794-29277813 Msa0113370:intron 40.0%
TACCGCATGGTTTATCTTGT+AGG - chr1_3:29277821-29277840 Msa0113370:CDS 40.0%
ACCGCATGGTTTATCTTGTA+GGG - chr1_3:29277822-29277841 Msa0113370:CDS 40.0%
ACCCTACAAGATAAACCATG+CGG + chr1_3:29277826-29277845 None:intergenic 40.0%
CATGGTTTATCTTGTAGGGT+TGG - chr1_3:29277826-29277845 Msa0113370:CDS 40.0%
GAAACAAAGCCATAGTGAAG+CGG + chr1_3:29277947-29277966 None:intergenic 40.0%
CAGGCACATCAATCAAATCT+AGG + chr1_3:29277980-29277999 None:intergenic 40.0%
TTGATTGATGTGCCTGTGTT+TGG - chr1_3:29277984-29278003 Msa0113370:intron 40.0%
TTGGACTCTCGTTGTTTAAC+TGG - chr1_3:29278003-29278022 Msa0113370:intron 40.0%
TTGGAGACGTCCATAATAGA+GGG + chr1_3:29278074-29278093 None:intergenic 40.0%
ATTGGAGACGTCCATAATAG+AGG + chr1_3:29278075-29278094 None:intergenic 40.0%
ATGGACGTCTCCAATACAAT+TGG - chr1_3:29278080-29278099 Msa0113370:intron 40.0%
CCAATACAATTGGCTATAGC+CGG - chr1_3:29278090-29278109 Msa0113370:intron 40.0%
CACACTACATGTAGAAGAAG+CGG + chr1_3:29278160-29278179 None:intergenic 40.0%
! TGTGTTGGCATGGTTGAATA+GGG + chr1_3:29278474-29278493 None:intergenic 40.0%
! TTGTGTTGGCATGGTTGAAT+AGG + chr1_3:29278475-29278494 None:intergenic 40.0%
!! GTTTTCATCTTGTGTTGGCA+TGG + chr1_3:29278484-29278503 None:intergenic 40.0%
! TTAAACCCTGTCGAGCTTTT+AGG - chr1_3:29278509-29278528 Msa0113370:intron 40.0%
!!! TCGAGCTTTTAGGTTGGAAA+AGG - chr1_3:29278519-29278538 Msa0113370:intron 40.0%
GGAAAAGGCGAAGTAATGAA+TGG - chr1_3:29278534-29278553 Msa0113370:intron 40.0%
AGATAGAGGCAGTTGTGAAA+GGG - chr1_3:29278710-29278729 Msa0113370:intron 40.0%
TGTTCACCTGTATGAAGCAA+AGG - chr1_3:29278734-29278753 Msa0113370:intron 40.0%
GTTCACCTGTATGAAGCAAA+GGG - chr1_3:29278735-29278754 Msa0113370:intron 40.0%
TTCACCTGTATGAAGCAAAG+GGG - chr1_3:29278736-29278755 Msa0113370:intron 40.0%
AGGTTGAACTAAAAGGTCCA+TGG - chr1_3:29278818-29278837 Msa0113370:CDS 40.0%
TTTGCAAAAAGGTTCAGCCA+TGG + chr1_3:29278838-29278857 None:intergenic 40.0%
! ATGGCTGAACCTTTTTGCAA+AGG - chr1_3:29278837-29278856 Msa0113370:CDS 40.0%
! TGGCTGAACCTTTTTGCAAA+GGG - chr1_3:29278838-29278857 Msa0113370:CDS 40.0%
! CTAAGCTTTATCATGCTAGG+TGG - chr1_3:29278998-29279017 Msa0113370:intron 40.0%
!!! TCTGATAGTTTTGGAGTGAG+AGG + chr1_3:29279197-29279216 None:intergenic 40.0%
GCATAAGAAAGTGAGGTTCA+TGG + chr1_3:29279284-29279303 None:intergenic 40.0%
AGTCATGTGAAACCAAGAGA+TGG + chr1_3:29279377-29279396 None:intergenic 40.0%
TGCCGTGCTATCATAATTCT+TGG - chr1_3:29279838-29279857 Msa0113370:intron 40.0%
TGCAAATATCCAACGGCTTA+TGG - chr1_3:29279935-29279954 Msa0113370:intron 40.0%
GACTATGAGAGCAATTGTGA+TGG + chr1_3:29279981-29280000 None:intergenic 40.0%
!! AACTTAAGAGTGGCTTGCTT+AGG - chr1_3:29280493-29280512 Msa0113370:intron 40.0%
CTTGGGAGTAAGAAGATGAA+AGG - chr1_3:29280518-29280537 Msa0113370:intron 40.0%
CTCGAACTTTCGGAGTAATA+AGG + chr1_3:29280736-29280755 None:intergenic 40.0%
ACTTGAAGCTCTCGAACTTT+CGG + chr1_3:29280746-29280765 None:intergenic 40.0%
CCTGGTTTCCATAATCCTAA+TGG + chr1_3:29280948-29280967 None:intergenic 40.0%
CCATTAGGATTATGGAAACC+AGG - chr1_3:29280945-29280964 Msa0113370:intron 40.0%
TTCTCTGCTACTGTTACGTT+TGG + chr1_3:29281026-29281045 None:intergenic 40.0%
AAACGTAACAGTAGCAGAGA+AGG - chr1_3:29281025-29281044 Msa0113370:intron 40.0%
AACGTAACAGTAGCAGAGAA+GGG - chr1_3:29281026-29281045 Msa0113370:intron 40.0%
!! TGTTTGATTTGATCGATCGG+AGG + chr1_3:29281195-29281214 None:intergenic 40.0%
AAACTGTTAGGACGAACCTT+TGG - chr1_3:29281236-29281255 Msa0113370:intron 40.0%
AAAGCTGCCAACTATACCAA+AGG + chr1_3:29281255-29281274 None:intergenic 40.0%
!!! AATCCCCCTTATTTTGGGAA+AGG - chr1_3:29281831-29281850 Msa0113370:intron 40.0%
! ATATCATGAAAGTGCGTGAG+TGG - chr1_3:29282090-29282109 Msa0113370:CDS 40.0%
CCAAAGAGTTCTTGCATAAG+TGG + chr1_3:29282132-29282151 None:intergenic 40.0%
CCACTTATGCAAGAACTCTT+TGG - chr1_3:29282129-29282148 Msa0113370:CDS 40.0%
!! CATTTCAAGTTTGCTCCTTG+TGG + chr1_3:29282232-29282251 None:intergenic 40.0%
ATAGGCAATATGATTGGGCA+AGG - chr1_3:29282460-29282479 Msa0113370:intron 40.0%
TAGGCAATATGATTGGGCAA+GGG - chr1_3:29282461-29282480 Msa0113370:intron 40.0%
! TTTCATTGCTTTGAATGGGC+AGG - chr1_3:29282804-29282823 Msa0113370:intron 40.0%
CCAACTTTCACTTGACACAA+TGG + chr1_3:29283074-29283093 None:intergenic 40.0%
CCATTGTGTCAAGTGAAAGT+TGG - chr1_3:29283071-29283090 Msa0113370:intron 40.0%
TAAAGCCTATCAACGTCTCT+TGG + chr1_3:29283291-29283310 None:intergenic 40.0%
GTCAACATCACATTCTCGTT+TGG - chr1_3:29283482-29283501 Msa0113370:intron 40.0%
CAACATCACATTCTCGTTTG+GGG - chr1_3:29283484-29283503 Msa0113370:intron 40.0%
CCTAATCACATACGCAAACA+TGG + chr1_3:29283517-29283536 None:intergenic 40.0%
CCATGTTTGCGTATGTGATT+AGG - chr1_3:29283514-29283533 Msa0113370:intron 40.0%
AGGCACATGGCCTATAAATA+AGG - chr1_3:29283660-29283679 Msa0113370:intron 40.0%
! GTATAGACTTGTGGCCTTTT+AGG - chr1_3:29283859-29283878 Msa0113370:intron 40.0%
!! TTGTGGCCTTTTAGGAATTG+AGG - chr1_3:29283867-29283886 Msa0113370:intron 40.0%
GGACTTCCTCAATTCCTAAA+AGG + chr1_3:29283876-29283895 None:intergenic 40.0%
ATATATGAATAAGGCCGAGG+GGG + chr1_3:29284036-29284055 None:intergenic 40.0%
GCCTTAACGTACAAACTTTC+TGG - chr1_3:29284130-29284149 Msa0113370:intron 40.0%
GAAGCAGCAATGTAGCATAT+AGG + chr1_3:29284214-29284233 None:intergenic 40.0%
! AGGAATGTCTTGCTCTCTTT+TGG - chr1_3:29284561-29284580 Msa0113370:intron 40.0%
! AGAAACCGTAAGCTTTTCTC+AGG - chr1_3:29284711-29284730 Msa0113370:intron 40.0%
! GAAACCGTAAGCTTTTCTCA+GGG - chr1_3:29284712-29284731 Msa0113370:intron 40.0%
TGATCCCTGAGAAAAGCTTA+CGG + chr1_3:29284719-29284738 None:intergenic 40.0%
!!! CAGTGCATTTTTTCTTAGCC+TGG - chr1_3:29284737-29284756 Msa0113370:intron 40.0%
!!! GCATTTTTTCTTAGCCTGGT+AGG - chr1_3:29284741-29284760 Msa0113370:intron 40.0%
!! TATGTAGTGGGAGAAGGTTT+TGG - chr1_3:29284890-29284909 Msa0113370:intron 40.0%
GGCTTCACTATTAACAGAAG+TGG + chr1_3:29285037-29285056 None:intergenic 40.0%
GTAAACAAACTCAAGCATGC+TGG + chr1_3:29285099-29285118 None:intergenic 40.0%
!! GTAACTAACACTGACTTTCG+CGG - chr1_3:29285945-29285964 Msa0113370:intron 40.0%
TATTCAATAGCGTTGCTGTC+CGG - chr1_3:29286001-29286020 Msa0113370:CDS 40.0%
CAGAGATAACTGAAAGACTC+CGG + chr1_3:29286023-29286042 None:intergenic 40.0%
AGTCTTTCAGTTATCTCTGG+TGG - chr1_3:29286024-29286043 Msa0113370:CDS 40.0%
! TAACTGGTTGAGTTTTCACC+TGG + chr1_3:29286107-29286126 None:intergenic 40.0%
TCTATAACCGCAACCATTAC+TGG + chr1_3:29286279-29286298 None:intergenic 40.0%
ATTTGGAGAATCTGGGTTAC+TGG - chr1_3:29286314-29286333 Msa0113370:intron 40.0%
AGACAATACCGGTAATGTCA+AGG - chr1_3:29286477-29286496 Msa0113370:intron 40.0%
TTAAGCCACCTTGACATTAC+CGG + chr1_3:29286488-29286507 None:intergenic 40.0%
! TCGTCATTGATTGTCATCTG+TGG - chr1_3:29286529-29286548 Msa0113370:intron 40.0%
! TCATCTGTGGATTGATATGC+TGG - chr1_3:29286542-29286561 Msa0113370:intron 40.0%
!! CTAATTTTGGCAACTCATGG+TGG + chr1_3:29286637-29286656 None:intergenic 40.0%
TCGGAAACAATATGCTGGAA+CGG + chr1_3:29286691-29286710 None:intergenic 40.0%
GGACTGCTTACATGATTACT+TGG + chr1_3:29286826-29286845 None:intergenic 40.0%
GTCCCCTGTACTCTTAAAAA+TGG - chr1_3:29286842-29286861 Msa0113370:CDS 40.0%
!!! GGCCATTTTTAAGAGTACAG+GGG + chr1_3:29286847-29286866 None:intergenic 40.0%
!! ATAATGAGTGGTGGATGTCT+TGG + chr1_3:29286868-29286887 None:intergenic 40.0%
AGACATCCACCACTCATTAT+TGG - chr1_3:29286868-29286887 Msa0113370:CDS 40.0%
GAAAAGCCAATAATGAGTGG+TGG + chr1_3:29286877-29286896 None:intergenic 40.0%
AAAATAGAGGGGTTGGACGA+GGG + chr1_3:29276969-29276988 None:intergenic 45.0%
GGAAGAAGGGGAAAATAGAG+GGG + chr1_3:29276980-29276999 None:intergenic 45.0%
GGGAAGAAGGGGAAAATAGA+GGG + chr1_3:29276981-29277000 None:intergenic 45.0%
TAGAGTGAGGGATTTAACGG+CGG + chr1_3:29277022-29277041 None:intergenic 45.0%
GCGTAGAGTGAGGGATTTAA+CGG + chr1_3:29277025-29277044 None:intergenic 45.0%
GATTGAGCACATGGTCTGAA+GGG + chr1_3:29277060-29277079 None:intergenic 45.0%
CCCCTAGCAAAGCTCAAAAT+GGG + chr1_3:29277144-29277163 None:intergenic 45.0%
! CCCATTTTGAGCTTTGCTAG+GGG - chr1_3:29277141-29277160 Msa0113370:three_prime_UTR 45.0%
!! ATATAGAGAGAGGCACCTAG+AGG + chr1_3:29277177-29277196 None:intergenic 45.0%
!! GTCTCCGGACCAATTTGTTA+TGG - chr1_3:29277333-29277352 Msa0113370:three_prime_UTR 45.0%
CGAGGGAATAATTTGGGGAT+TGG - chr1_3:29277361-29277380 Msa0113370:three_prime_UTR 45.0%
TTGTGGCCCAACTTAGACAT+TGG + chr1_3:29277476-29277495 None:intergenic 45.0%
TGGGCCACAAGATAATTGTG+AGG - chr1_3:29277486-29277505 Msa0113370:intron 45.0%
TCAACAGCACAACCAAGACT+AGG + chr1_3:29277664-29277683 None:intergenic 45.0%
GTATCCAAAATTGGGCCGTT+TGG - chr1_3:29277694-29277713 Msa0113370:intron 45.0%
GTGTTGCGAAGCGAAGAAAT+TGG - chr1_3:29277848-29277867 Msa0113370:CDS 45.0%
AACAACGAGAGTCCAAACAC+AGG + chr1_3:29277999-29278018 None:intergenic 45.0%
CCGGCTATAGCCAATTGTAT+TGG + chr1_3:29278093-29278112 None:intergenic 45.0%
ATGTAGAAGAAGCGGTGGAA+AGG + chr1_3:29278152-29278171 None:intergenic 45.0%
ACTACATGTAGAAGAAGCGG+TGG + chr1_3:29278157-29278176 None:intergenic 45.0%
TCCAACCTAAAAGCTCGACA+GGG + chr1_3:29278517-29278536 None:intergenic 45.0%
TTCCAACCTAAAAGCTCGAC+AGG + chr1_3:29278518-29278537 None:intergenic 45.0%
AGGCGAAGTAATGAATGGAG+TGG - chr1_3:29278539-29278558 Msa0113370:intron 45.0%
ATGTGCATGTGTTAGGGTAG+TGG - chr1_3:29278680-29278699 Msa0113370:intron 45.0%
GAGATAGAGGCAGTTGTGAA+AGG - chr1_3:29278709-29278728 Msa0113370:intron 45.0%
AGTGAGGTTCATGGATCATG+CGG + chr1_3:29279275-29279294 None:intergenic 45.0%
GGGAGTTGCATAAGAAAGTG+AGG + chr1_3:29279291-29279310 None:intergenic 45.0%
TCTAGCACTTGCAATGCAGT+TGG - chr1_3:29280193-29280212 Msa0113370:intron 45.0%
AGCAAGCTGCAGAATCAAAG+TGG + chr1_3:29280236-29280255 None:intergenic 45.0%
ACTTTGATTCTGCAGCTTGC+TGG - chr1_3:29280235-29280254 Msa0113370:intron 45.0%
!! AGTGGCTTGCTTAGGATCTT+GGG - chr1_3:29280501-29280520 Msa0113370:intron 45.0%
TGGACTTGAAACACGACTCT+AGG - chr1_3:29280684-29280703 Msa0113370:intron 45.0%
TGATTTGATCGATCGGAGGA+GGG + chr1_3:29281191-29281210 None:intergenic 45.0%
! TTGATTTGATCGATCGGAGG+AGG + chr1_3:29281192-29281211 None:intergenic 45.0%
GGACGAACCTTTGGTATAGT+TGG - chr1_3:29281245-29281264 Msa0113370:intron 45.0%
TGGTATAGTTGGCAGCTTTG+TGG - chr1_3:29281256-29281275 Msa0113370:intron 45.0%
! GTTAGCCTAGCTTGAAAAGC+TGG + chr1_3:29281290-29281309 None:intergenic 45.0%
GAAACCTAGCAGTAAGCTCA+TGG + chr1_3:29281933-29281952 None:intergenic 45.0%
CGTATGTGATTAGGGTTCAC+AGG - chr1_3:29283523-29283542 Msa0113370:intron 45.0%
ATGTGATTAGGGTTCACAGG+AGG - chr1_3:29283526-29283545 Msa0113370:intron 45.0%
AGAGATTAGGGGGTTCACTT+AGG - chr1_3:29283686-29283705 Msa0113370:intron 45.0%
!! ACTTAGGTGCCATTGGTCTT+TGG - chr1_3:29283702-29283721 Msa0113370:intron 45.0%
!!! CCATTGGCTTTTGGTGTCAT+TGG + chr1_3:29283836-29283855 None:intergenic 45.0%
CCAATGACACCAAAAGCCAA+TGG - chr1_3:29283833-29283852 Msa0113370:CDS 45.0%
!!! CTATACGTGCCATTGGCTTT+TGG + chr1_3:29283845-29283864 None:intergenic 45.0%
CACAAGTCTATACGTGCCAT+TGG + chr1_3:29283852-29283871 None:intergenic 45.0%
CAATGGCACGTATAGACTTG+TGG - chr1_3:29283850-29283869 Msa0113370:intron 45.0%
!! TCACTTTCACTTTTCCCCCT+CGG - chr1_3:29284019-29284038 Msa0113370:intron 45.0%
!!! TTTTTGGGTGTTCAGCTGAC+AGG - chr1_3:29284475-29284494 Msa0113370:intron 45.0%
GAAGGAAGCAAATTCCTACC+AGG + chr1_3:29284758-29284777 None:intergenic 45.0%
! CAAGTCTATGTAGTGGGAGA+AGG - chr1_3:29284884-29284903 Msa0113370:intron 45.0%
!! TAGTGGGAGAAGGTTTTGGT+GGG - chr1_3:29284894-29284913 Msa0113370:intron 45.0%
ATATCATCCTGCAGGTACCT+TGG - chr1_3:29284990-29285009 Msa0113370:intron 45.0%
! GACTTGCTCACTTGTATCCA+AGG + chr1_3:29285010-29285029 None:intergenic 45.0%
GGATACAAGTGAGCAAGTCA+AGG - chr1_3:29285011-29285030 Msa0113370:intron 45.0%
!! AAGTGAGTGCCACTTTAGAG+TGG + chr1_3:29285329-29285348 None:intergenic 45.0%
!! CTCTAAAGTGGCACTCACTT+TGG - chr1_3:29285329-29285348 Msa0113370:intron 45.0%
CATGTGCAAAAGAACCCCAT+AGG + chr1_3:29285575-29285594 None:intergenic 45.0%
CGGAGTCTTTCAGTTATCTC+TGG - chr1_3:29286021-29286040 Msa0113370:CDS 45.0%
!! TGCGTTGGCATTTTCTTCAC+GGG + chr1_3:29286067-29286086 None:intergenic 45.0%
!! GTGCGTTGGCATTTTCTTCA+CGG + chr1_3:29286068-29286087 None:intergenic 45.0%
TGCAACTAGTATGAGTGCGT+TGG + chr1_3:29286082-29286101 None:intergenic 45.0%
ACTCATACTAGTTGCAAGCC+AGG - chr1_3:29286086-29286105 Msa0113370:intron 45.0%
GTTTCAGTCTGCGACATAAG+AGG - chr1_3:29286164-29286183 Msa0113370:intron 45.0%
TCTCCAAATGCACCACAAAG+TGG + chr1_3:29286303-29286322 None:intergenic 45.0%
TGTGGTGCATTTGGAGAATC+TGG - chr1_3:29286306-29286325 Msa0113370:intron 45.0%
GTGGTGCATTTGGAGAATCT+GGG - chr1_3:29286307-29286326 Msa0113370:intron 45.0%
ATGCGTCGCAAAGACAATAC+CGG - chr1_3:29286466-29286485 Msa0113370:intron 45.0%
CAATACCGGTAATGTCAAGG+TGG - chr1_3:29286480-29286499 Msa0113370:intron 45.0%
ATGTCAAGGTGGCTTAAGAG+AGG - chr1_3:29286491-29286510 Msa0113370:intron 45.0%
GAAACACATCATGCTGCACA+TGG - chr1_3:29286573-29286592 Msa0113370:intron 45.0%
!! TTTAAAAAAAAAGATTTAAA+TGG - chr1_3:29284804-29284823 Msa0113370:intron 5.0%
CGTGAGGATGAGTAAATGGG+CGG + chr1_3:29276929-29276948 None:intergenic 50.0%
CGGCGTGAGGATGAGTAAAT+GGG + chr1_3:29276932-29276951 None:intergenic 50.0%
CGAGGGAATGAGGATGAATG+CGG + chr1_3:29276952-29276971 None:intergenic 50.0%
GAAAATAGAGGGGTTGGACG+AGG + chr1_3:29276970-29276989 None:intergenic 50.0%
GAAGGGGAAAATAGAGGGGT+TGG + chr1_3:29276976-29276995 None:intergenic 50.0%
CGGGAAGAAGGGGAAAATAG+AGG + chr1_3:29276982-29277001 None:intergenic 50.0%
ATTTAACGGCGGAGTGAGCA+TGG + chr1_3:29277011-29277030 None:intergenic 50.0%
GGATTGAGCACATGGTCTGA+AGG + chr1_3:29277061-29277080 None:intergenic 50.0%
ACCATGTGCTCAATCCCATC+AGG - chr1_3:29277065-29277084 Msa0113370:three_prime_UTR 50.0%
CCATGTGCTCAATCCCATCA+GGG - chr1_3:29277066-29277085 Msa0113370:three_prime_UTR 50.0%
ACCACTACCATCTCCCTGAT+GGG + chr1_3:29277082-29277101 None:intergenic 50.0%
TACCACTACCATCTCCCTGA+TGG + chr1_3:29277083-29277102 None:intergenic 50.0%
GCCCCTAGCAAAGCTCAAAA+TGG + chr1_3:29277145-29277164 None:intergenic 50.0%
AGGGGCAATGTCTTACCTCT+AGG - chr1_3:29277159-29277178 Msa0113370:three_prime_UTR 50.0%
! GGGATTCAACGACTTTAGGG+CGG - chr1_3:29277382-29277401 Msa0113370:exon 50.0%
!! GGATTCAACGACTTTAGGGC+GGG - chr1_3:29277383-29277402 Msa0113370:exon 50.0%
CTGATTTCTGCGGTGACGTT+AGG - chr1_3:29277628-29277647 Msa0113370:intron 50.0%
! ATGTTCTGGGTTCTACCGCA+TGG - chr1_3:29277808-29277827 Msa0113370:CDS 50.0%
TTGGTGCAGCTGTAGAAGCA+TGG - chr1_3:29277867-29277886 Msa0113370:CDS 50.0%
CATGGCCTGTTGGACTCTTT+GGG - chr1_3:29277885-29277904 Msa0113370:CDS 50.0%
ACTAGCCCAAAGAGTCCAAC+AGG + chr1_3:29277893-29277912 None:intergenic 50.0%
!! ACCCTGTCGAGCTTTTAGGT+TGG - chr1_3:29278513-29278532 Msa0113370:intron 50.0%
! ATGTGTTAGGGTAGTGGCGA+AGG - chr1_3:29278686-29278705 Msa0113370:intron 50.0%
! TGTGTTAGGGTAGTGGCGAA+GGG - chr1_3:29278687-29278706 Msa0113370:intron 50.0%
GTGAGGTTCATGGATCATGC+GGG + chr1_3:29279274-29279293 None:intergenic 50.0%
ATGATAGCACGGCAGTAGCA+GGG + chr1_3:29279832-29279851 None:intergenic 50.0%
TATGATAGCACGGCAGTAGC+AGG + chr1_3:29279833-29279852 None:intergenic 50.0%
!! AAGTGGTGTTGCACTTACCC+AGG - chr1_3:29280085-29280104 Msa0113370:intron 50.0%
TGCTGGAGCAAATACTGCAC+TGG - chr1_3:29280252-29280271 Msa0113370:intron 50.0%
!! GAGTGGCTTGCTTAGGATCT+TGG - chr1_3:29280500-29280519 Msa0113370:intron 50.0%
AGCAGTAAGCTCATGGAAGG+AGG + chr1_3:29281926-29281945 None:intergenic 50.0%
CCTAGCAGTAAGCTCATGGA+AGG + chr1_3:29281929-29281948 None:intergenic 50.0%
CCTTCCATGAGCTTACTGCT+AGG - chr1_3:29281926-29281945 Msa0113370:intron 50.0%
TCTGCCATAGCCTGCTATAG+AGG + chr1_3:29283384-29283403 None:intergenic 50.0%
TATAGCAGGCTATGGCAGAG+CGG - chr1_3:29283385-29283404 Msa0113370:intron 50.0%
GGAGTCATCACACTGACACT+AGG + chr1_3:29284077-29284096 None:intergenic 50.0%
!! GTAGTGGGAGAAGGTTTTGG+TGG - chr1_3:29284893-29284912 Msa0113370:intron 50.0%
! CTTGTATCCAAGGTACCTGC+AGG + chr1_3:29285000-29285019 None:intergenic 50.0%
! GGATCACAGCCACTCTAAAG+TGG - chr1_3:29285317-29285336 Msa0113370:intron 50.0%
TGGGGGTGATACTTGACCTA+TGG - chr1_3:29285556-29285575 Msa0113370:intron 50.0%
GGGGGTGATACTTGACCTAT+GGG - chr1_3:29285557-29285576 Msa0113370:intron 50.0%
GGGGTGATACTTGACCTATG+GGG - chr1_3:29285558-29285577 Msa0113370:intron 50.0%
! TTGGTAATCAGAGGGTCCCA+TGG + chr1_3:29285836-29285855 None:intergenic 50.0%
! GCGGTTATAGAGCCACTTTG+TGG - chr1_3:29286288-29286307 Msa0113370:intron 50.0%
! GAGCCACTTTGTGGTGCATT+TGG - chr1_3:29286297-29286316 Msa0113370:intron 50.0%
!! AAGGTGTTCGGGTTAGCATG+AGG + chr1_3:29286412-29286431 None:intergenic 50.0%
GAGGATGAGTAAATGGGCGG+TGG + chr1_3:29276926-29276945 None:intergenic 55.0%
GCGGCGTGAGGATGAGTAAA+TGG + chr1_3:29276933-29276952 None:intergenic 55.0%
ATGAGGATGAATGCGGCGTG+AGG + chr1_3:29276945-29276964 None:intergenic 55.0%
CACATGGTCTGAAGGGAGTG+GGG + chr1_3:29277053-29277072 None:intergenic 55.0%
GCACATGGTCTGAAGGGAGT+GGG + chr1_3:29277054-29277073 None:intergenic 55.0%
AGCACATGGTCTGAAGGGAG+TGG + chr1_3:29277055-29277074 None:intergenic 55.0%
CCCTGATGGGATTGAGCACA+TGG + chr1_3:29277069-29277088 None:intergenic 55.0%
GCTCAATCCCATCAGGGAGA+TGG - chr1_3:29277072-29277091 Msa0113370:three_prime_UTR 55.0%
TCCCATCAGGGAGATGGTAG+TGG - chr1_3:29277078-29277097 Msa0113370:three_prime_UTR 55.0%
!! CAGGGAGATGGTAGTGGTAG+TGG - chr1_3:29277084-29277103 Msa0113370:three_prime_UTR 55.0%
TTAGGGCGGGAAAGTCACGT+TGG - chr1_3:29277396-29277415 Msa0113370:exon 55.0%
! GCTGTAGAAGCATGGCCTGT+TGG - chr1_3:29277875-29277894 Msa0113370:CDS 55.0%
GCATGGCCTGTTGGACTCTT+TGG - chr1_3:29277884-29277903 Msa0113370:CDS 55.0%
GTAGTGGCGAAGGGAGATAG+AGG - chr1_3:29278696-29278715 Msa0113370:intron 55.0%
GTCGCCCCTTTGCTTCATAC+AGG + chr1_3:29278743-29278762 None:intergenic 55.0%
GTCAATCGCGCCTCTATAGC+AGG - chr1_3:29283371-29283390 Msa0113370:intron 55.0%
!! ACTGGTGGAAGGTGTTGCAC+AGG + chr1_3:29283420-29283439 None:intergenic 55.0%
TATTGAGCGTGGCTCACTGG+TGG + chr1_3:29283435-29283454 None:intergenic 55.0%
ACCAGTGAGCCACGCTCAAT+AGG - chr1_3:29283434-29283453 Msa0113370:intron 55.0%
ACCTATTGAGCGTGGCTCAC+TGG + chr1_3:29283438-29283457 None:intergenic 55.0%
TGAGCCACGCTCAATAGGTG+TGG - chr1_3:29283439-29283458 Msa0113370:intron 55.0%
AATAGGTGTGGCGGTCACAG+CGG - chr1_3:29283451-29283470 Msa0113370:intron 55.0%
! GGGGTTCACTTAGGTGCCAT+TGG - chr1_3:29283695-29283714 Msa0113370:intron 55.0%
TGTGTGATGGTCTGTGTGCC+TGG - chr1_3:29285274-29285293 Msa0113370:intron 55.0%
AGGGGTTGGACGAGGGAATG+AGG + chr1_3:29276962-29276981 None:intergenic 60.0%
ATGGTCTGAAGGGAGTGGGG+AGG + chr1_3:29277050-29277069 None:intergenic 60.0%
GTTTGCTCCTTGTGGACCCC+AGG + chr1_3:29282224-29282243 None:intergenic 60.0%
CGCGCCTCTATAGCAGGCTA+TGG - chr1_3:29283377-29283396 Msa0113370:intron 60.0%
GCCACGCTCAATAGGTGTGG+CGG - chr1_3:29283442-29283461 Msa0113370:intron 60.0%
ACCGCCACACCTATTGAGCG+TGG + chr1_3:29283446-29283465 None:intergenic 60.0%
ATGGCGAGGGCGGGAAGAAG+GGG + chr1_3:29276992-29277011 None:intergenic 65.0%
CATGGCGAGGGCGGGAAGAA+GGG + chr1_3:29276993-29277012 None:intergenic 65.0%
GGGGAGGTGGCGTAGAGTGA+GGG + chr1_3:29277034-29277053 None:intergenic 65.0%
TGGGGAGGTGGCGTAGAGTG+AGG + chr1_3:29277035-29277054 None:intergenic 65.0%
GTCTGAAGGGAGTGGGGAGG+TGG + chr1_3:29277047-29277066 None:intergenic 65.0%
GAATGGGCCTGGGGTCCACA+AGG - chr1_3:29282214-29282233 Msa0113370:intron 65.0%
AGCAGGCTATGGCAGAGCGG+TGG - chr1_3:29283388-29283407 Msa0113370:intron 65.0%
GAGCGTGGCTCACTGGTGGA+AGG + chr1_3:29283431-29283450 None:intergenic 65.0%
GCATGGCGAGGGCGGGAAGA+AGG + chr1_3:29276994-29277013 None:intergenic 70.0%
GGAGTGAGCATGGCGAGGGC+GGG + chr1_3:29277001-29277020 None:intergenic 70.0%
CGGAGTGAGCATGGCGAGGG+CGG + chr1_3:29277002-29277021 None:intergenic 70.0%
CGGCGGAGTGAGCATGGCGA+GGG + chr1_3:29277005-29277024 None:intergenic 70.0%
ACGGCGGAGTGAGCATGGCG+AGG + chr1_3:29277006-29277025 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 29276913 29286993 29276913 ID=Msa0113370;Name=Msa0113370
chr1_3 mRNA 29276913 29286993 29276913 ID=Msa0113370-mRNA-1;Parent=Msa0113370;Name=Msa0113370-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.91|0.92|1|0.75|0.84|13|486|385
chr1_3 exon 29276913 29277470 29276913 ID=Msa0113370-mRNA-1:exon:9693;Parent=Msa0113370-mRNA-1
chr1_3 exon 29277538 29277639 29277538 ID=Msa0113370-mRNA-1:exon:9692;Parent=Msa0113370-mRNA-1
chr1_3 exon 29277799 29277928 29277799 ID=Msa0113370-mRNA-1:exon:9691;Parent=Msa0113370-mRNA-1
chr1_3 exon 29278817 29278902 29278817 ID=Msa0113370-mRNA-1:exon:9690;Parent=Msa0113370-mRNA-1
chr1_3 exon 29279148 29279215 29279148 ID=Msa0113370-mRNA-1:exon:9689;Parent=Msa0113370-mRNA-1
chr1_3 exon 29281059 29281080 29281059 ID=Msa0113370-mRNA-1:exon:9688;Parent=Msa0113370-mRNA-1
chr1_3 exon 29282054 29282167 29282054 ID=Msa0113370-mRNA-1:exon:9687;Parent=Msa0113370-mRNA-1
chr1_3 exon 29283588 29283656 29283588 ID=Msa0113370-mRNA-1:exon:9686;Parent=Msa0113370-mRNA-1
chr1_3 exon 29283800 29283858 29283800 ID=Msa0113370-mRNA-1:exon:9685;Parent=Msa0113370-mRNA-1
chr1_3 exon 29284257 29284335 29284257 ID=Msa0113370-mRNA-1:exon:9684;Parent=Msa0113370-mRNA-1
chr1_3 exon 29285996 29286063 29285996 ID=Msa0113370-mRNA-1:exon:9683;Parent=Msa0113370-mRNA-1
chr1_3 exon 29286173 29286280 29286173 ID=Msa0113370-mRNA-1:exon:9682;Parent=Msa0113370-mRNA-1
chr1_3 exon 29286813 29286993 29286813 ID=Msa0113370-mRNA-1:exon:9681;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29286813 29286993 29286813 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29286173 29286280 29286173 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29285996 29286063 29285996 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29284257 29284335 29284257 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29283800 29283858 29283800 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29283588 29283656 29283588 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29282054 29282167 29282054 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29281059 29281080 29281059 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29279148 29279215 29279148 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29278817 29278902 29278817 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29277799 29277928 29277799 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29277538 29277639 29277538 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 CDS 29277399 29277470 29277399 ID=Msa0113370-mRNA-1:cds;Parent=Msa0113370-mRNA-1
chr1_3 three_prime_UTR 29276913 29277398 29276913 ID=Msa0113370-mRNA-1:three_prime_utr;Parent=Msa0113370-mRNA-1
Gene Sequence

>Msa0113370

ATGGCGGGAACCACCGCCCATTTACTCATCCTCACGCCGCATTCATCCTCATTCCCTCGTCCAACCCCTCTATTTTCCCCTTCTTCCCGCCCTCGCCATGCTCACTCCGCCGTTAAATCCCTCACTCTACGCCACCTCCCCACTCCCTTCAGACCATGTGCTCAATCCCATCAGGGAGATGCTCTGATTTCTGCGGTGACGTTAGGATTAACATGTCCTAGTCTTGGTTGTGCTGTTGACAAATATCATGTATCCAAAATTGGGCCGTTTGGAATTTTTGTTATCTCAGGGTTGGTGTTGCGAAGCGAAGAAATTGGTGCAGCTGTAGAAGCATGGCCTGTTGGACTCTTTGGGCTAGTATCTATTTTATTTCTTACACCATACTTTTCCAGGGTAATATTACAAATTCAGCTCCAACCCCAAGAATTTATTACAGGGTTAGCCATATTTTGCTGTATGCCAACTACATTATCAAGTGGTGTTGCACTTACCCAGCTTGCTGGAGCAAATACTGCACTGGCTCTTGCAATGACAGTAATATCTAACTTGTTAGGAATATTAATCATTCCATTTTCCATCACAAAATTTGTAGCTAGTGGAGTTGGAGTGACTTTACCCACCAAGCAGTTATTTAAAAGTCTTGTTCTTACCATATTAATCCCCCTTATTTTGGGAAAGGTTCTACGTGAATCTTTTAAAGATGTTGCTGACTTTGTTGACAGAAACCGTAAGCTTTTCTCAGGGATCAGTGCATTTTTTCTTAGCCTGGTACCTTGGATACAAGTGAGCAAGTCAAGGCCACTTCTGTTAATAGTGAAGCCCAAAGTTTTTCTTGTAGCTATTGGACTGGGAGCACTTCTTCATGTGACCTTATTGGTATTCAATAGCGTTGCTGTCCGGAGTCTTTCAGTTATCTCTGGTGGTAGAAAATCAACTTTTTCCCGTGAAGAAAATGCCAACGCACTCATACTAGTTGCAAGCCAGAAAACATTACCAGTAATGGTTGCGGTTATAGAGCCACTTTGTGGTGCATTTGGAGAATCTGGGTTACTGGTTCTTCCTTGTATTGCAACACATCTAATCCAGATTATTGTGGACTCTTTTCTTGTCAACTTCATGCGTCGCAAAGACAATACCGGTAATGTCAAGGTGGCTTAA
Protein sequence

>Msa0113370

MAGTTAHLLILTPHSSSFPRPTPLFSPSSRPRHAHSAVKSLTLRHLPTPFRPCAQSHQGDALISAVTLGLTCPSLGCAVDKYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLVSILFLTPYFSRVILQIQLQPQEFITGLAIFCCMPTTLSSGVALTQLAGANTALALAMTVISNLLGILIIPFSITKFVASGVGVTLPTKQLFKSLVLTILIPLILGKVLRESFKDVADFVDRNRKLFSGISAFFLSLVPWIQVSKSRPLLLIVKPKVFLVAIGLGALLHVTLLVFNSVAVRSLSVISGGRKSTFSREENANALILVASQKTLPVMVAVIEPLCGAFGESGLLVLPCIATHLIQIIVDSFLVNFMRRKDNTGNVKVA*