Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456390 | PNY16998.1 | 99.359 | 156 | 1 | 0 | 1 | 156 | 61 | 216 | 4.66e-112 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456390 | sp|Q9FKT5|THOC3_ARATH | 84.076 | 157 | 24 | 1 | 1 | 156 | 159 | 315 | 5.09e-95 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456390 | A0A2K3PNX8 | 99.359 | 156 | 1 | 0 | 1 | 156 | 61 | 216 | 2.22e-112 | 327 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032580 | Msa0456390 | 0.804735 | 1.872956e-49 | -8.615850e-47 |
| Msa0094470 | Msa0456390 | 0.804513 | 2.083357e-49 | -8.615850e-47 |
| Msa0385580 | Msa0456390 | 0.811057 | 8.469856e-51 | -8.615850e-47 |
| Msa0456390 | Msa0615440 | 0.810154 | 1.327108e-50 | -8.615850e-47 |
| Msa0456390 | Msa0698490 | 0.812807 | 3.521062e-51 | -8.615850e-47 |
| Msa0456390 | Msa0698660 | 0.813279 | 2.773994e-51 | -8.615850e-47 |
| Msa0456390 | Msa1394290 | 0.813289 | 2.760507e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456390 | MtrunA17_Chr3g0103361 | 100.000 | 156 | 0 | 0 | 1 | 156 | 158 | 313 | 1.86e-115 | 329 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456390 | AT5G56130.1 | 84.076 | 157 | 24 | 1 | 1 | 156 | 159 | 315 | 5.17e-96 | 280 |
Find 99 sgRNAs with CRISPR-Local
Find 626 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTCGAAGCTAGGAATTT+TGG | 0.143098 | 3_3:+49975278 | None:intergenic |
| TATGCAAGTACATTGTATTT+TGG | 0.187488 | 3_3:+49968162 | None:intergenic |
| TAATACCTTATTTAGGATTT+CGG | 0.215302 | 3_3:-49967706 | Msa0456390:three_prime_UTR |
| AATACCTTATTTAGGATTTC+GGG | 0.216343 | 3_3:-49967705 | Msa0456390:three_prime_UTR |
| TTGATCAAACTGCTCGAATT+TGG | 0.221602 | 3_3:-49974948 | Msa0456390:five_prime_UTR |
| TGCAATAAGATCGGGATGTT+TGG | 0.289165 | 3_3:+49973772 | None:intergenic |
| GCAATAAGATCGGGATGTTT+GGG | 0.297004 | 3_3:+49973773 | None:intergenic |
| GTGACAAGACTGTTCGTCTA+TGG | 0.297252 | 3_3:-49973739 | Msa0456390:five_prime_UTR |
| CGATCTTATTGCAACTGCTT+CGG | 0.300112 | 3_3:-49973762 | Msa0456390:five_prime_UTR |
| ACAATTAGTTTCAACCATAC+TGG | 0.312869 | 3_3:-49968764 | Msa0456390:CDS |
| TGTCAGCTTGTGGGTTATTT+CGG | 0.319330 | 3_3:-49968942 | Msa0456390:CDS |
| GATCTTATTGCAACTGCTTC+GGG | 0.329060 | 3_3:-49973761 | Msa0456390:five_prime_UTR |
| ACAGGAATCATTGAGCAAAT+TGG | 0.349288 | 3_3:+49969441 | None:intergenic |
| TTCTTTCTAACAACAGGAAA+TGG | 0.391405 | 3_3:-49969371 | Msa0456390:intron |
| CTGATTCCCTTGTCAGCTTG+TGG | 0.395348 | 3_3:-49968952 | Msa0456390:CDS |
| TCTTCACAGAAAATATGAAA+TGG | 0.407288 | 3_3:-49967833 | Msa0456390:three_prime_UTR |
| TGATTCCCTTGTCAGCTTGT+GGG | 0.409663 | 3_3:-49968951 | Msa0456390:CDS |
| CAGTACATCATATTCCTTGT+AGG | 0.413376 | 3_3:-49968212 | Msa0456390:CDS |
| ATTCCACTCAACACTATTCA+TGG | 0.415911 | 3_3:+49968185 | None:intergenic |
| TGCATTGCAATTGACCCAAC+AGG | 0.430132 | 3_3:-49969152 | Msa0456390:CDS |
| AAAAGGTGCATTCAGTGGCT+TGG | 0.441542 | 3_3:-49975005 | Msa0456390:intron |
| CAATTAGTTTCAACCATACT+GGG | 0.443807 | 3_3:-49968763 | Msa0456390:CDS |
| CCTAGGTAAATGAGATTGCT+TGG | 0.445389 | 3_3:-49969412 | Msa0456390:intron |
| ATGAGTCCCATCAGGTTTGT+AGG | 0.446382 | 3_3:+49973476 | None:intergenic |
| GGTCAAAGATATTGAATTGA+AGG | 0.446383 | 3_3:-49973831 | Msa0456390:five_prime_UTR |
| GAGATGTTCTTTCTAACAAC+AGG | 0.457171 | 3_3:-49969377 | Msa0456390:CDS |
| TTCTTAACTACCAAGGCAAA+TGG | 0.457268 | 3_3:+49967964 | None:intergenic |
| ATTGGCACAAAACTTGCTTC+TGG | 0.457664 | 3_3:-49974976 | Msa0456390:five_prime_UTR |
| AGTTAACAATACTTGATGTT+CGG | 0.458932 | 3_3:-49973211 | Msa0456390:five_prime_UTR |
| CGATGGATGGATTCGAAGCT+AGG | 0.462565 | 3_3:+49975270 | None:intergenic |
| TACAATGTACTTGCATATGC+TGG | 0.463487 | 3_3:-49968156 | Msa0456390:CDS |
| GATTTCTTACTTTCAGTGCC+TGG | 0.468702 | 3_3:-49967740 | Msa0456390:three_prime_UTR |
| TGAGACAGACATTTCGCTGT+TGG | 0.470477 | 3_3:-49968980 | Msa0456390:intron |
| CTTCACAGAAAATATGAAAT+GGG | 0.472179 | 3_3:-49967832 | Msa0456390:three_prime_UTR |
| CTTTCTTAAACAATGTCTCA+TGG | 0.472796 | 3_3:+49967639 | None:intergenic |
| CTTCATAGCAGAGAGTATTC+CGG | 0.475015 | 3_3:-49975185 | Msa0456390:five_prime_UTR |
| TGGGTCCGTCCCTGCGTAGC+GGG | 0.480446 | 3_3:-49975316 | None:intergenic |
| AAGCAATCAAGTCCCCAGTA+TGG | 0.482571 | 3_3:+49968750 | None:intergenic |
| TGTTTCTCAGATGGCCTGTC+CGG | 0.488476 | 3_3:-49968787 | Msa0456390:intron |
| TATCAACCTATGTGCTAAGA+AGG | 0.492640 | 3_3:-49967857 | Msa0456390:three_prime_UTR |
| AGGTGGAAAATGCTCACAAC+AGG | 0.493748 | 3_3:-49973529 | Msa0456390:five_prime_UTR |
| TATGGTTGAAACTAATTGTC+CGG | 0.499723 | 3_3:+49968768 | None:intergenic |
| CTATTCATGGCAGCCCTACA+AGG | 0.501447 | 3_3:+49968198 | None:intergenic |
| CGAAGCAGTTGCAATAAGAT+CGG | 0.502914 | 3_3:+49973763 | None:intergenic |
| AGAAGCATTACCTTCCTGTT+GGG | 0.503474 | 3_3:+49969138 | None:intergenic |
| CACAACAGGCAGAACTTAGT+GGG | 0.503581 | 3_3:-49973515 | Msa0456390:five_prime_UTR |
| GTATCAAGAGGTCGAAGAGA+TGG | 0.505442 | 3_3:+49969203 | None:intergenic |
| GGCATACAAACCATTTGCCT+TGG | 0.509078 | 3_3:-49967974 | Msa0456390:three_prime_UTR |
| TTGAACTTGCGCCTATGCAT+TGG | 0.510346 | 3_3:+49973179 | None:intergenic |
| GTGACAGTCCAATGTTCATA+CGG | 0.510916 | 3_3:-49968241 | Msa0456390:intron |
| TCCATGGCTTTCTTGAGACA+CGG | 0.512235 | 3_3:+49975230 | None:intergenic |
| TGACAAGACTGTTCGTCTAT+GGG | 0.513043 | 3_3:-49973738 | Msa0456390:five_prime_UTR |
| AACTTACTCGAGCTTTGTAA+AGG | 0.513452 | 3_3:+49968901 | None:intergenic |
| TCAGTGGCTTGGAATTGCAT+TGG | 0.521845 | 3_3:-49974994 | Msa0456390:five_prime_UTR |
| AAATGAGAATTGTTCCTCCA+TGG | 0.522481 | 3_3:+49975214 | None:intergenic |
| AAGAAGCATTACCTTCCTGT+TGG | 0.526316 | 3_3:+49969137 | None:intergenic |
| TCACAACAGGCAGAACTTAG+TGG | 0.530916 | 3_3:-49973516 | Msa0456390:five_prime_UTR |
| GAAGCAGTTGCAATAAGATC+GGG | 0.535149 | 3_3:+49973764 | None:intergenic |
| TGACAGTCCAATGTTCATAC+GGG | 0.537123 | 3_3:-49968240 | Msa0456390:intron |
| AACATCACCTACAAACCTGA+TGG | 0.546702 | 3_3:-49973483 | Msa0456390:five_prime_UTR |
| AGTACATCATATTCCTTGTA+GGG | 0.547208 | 3_3:-49968211 | Msa0456390:CDS |
| AAGGTTACTACATGGGCATG+TGG | 0.551642 | 3_3:+49974916 | None:intergenic |
| GTCAAAGATATTGAATTGAA+GGG | 0.552936 | 3_3:-49973830 | Msa0456390:five_prime_UTR |
| TACTCTCATGGCTCATACAG+CGG | 0.555050 | 3_3:-49969183 | Msa0456390:CDS |
| ACTCTCATGGCTCATACAGC+GGG | 0.555763 | 3_3:-49969182 | Msa0456390:CDS |
| GAAGATCCTTCTTAGCACAT+AGG | 0.556730 | 3_3:+49967851 | None:intergenic |
| TAGTGTGGATCAGCTATGTT+GGG | 0.558977 | 3_3:-49973798 | Msa0456390:five_prime_UTR |
| AAATAACCCACAAGCTGACA+AGG | 0.562424 | 3_3:+49968945 | None:intergenic |
| TCGACCTCTTGATACTCTCA+TGG | 0.565472 | 3_3:-49969195 | Msa0456390:CDS |
| ACAGCTACATGAGTCCCATC+AGG | 0.569784 | 3_3:+49973468 | None:intergenic |
| GGAAATTCAAACCAATGCAT+AGG | 0.586683 | 3_3:-49973190 | Msa0456390:five_prime_UTR |
| TTGAAACTAATTGTCCGGAC+AGG | 0.589710 | 3_3:+49968773 | None:intergenic |
| TAGGCGCAAGTTCAACTATG+AGG | 0.599831 | 3_3:-49973171 | Msa0456390:intron |
| TTTCGGAAATGCTTTGTGTG+CGG | 0.599990 | 3_3:-49968925 | Msa0456390:CDS |
| TGTGATTGTCGTACGATGGA+TGG | 0.601771 | 3_3:+49975257 | None:intergenic |
| ATAGTGTGGATCAGCTATGT+TGG | 0.602960 | 3_3:-49973799 | Msa0456390:five_prime_UTR |
| GAGATTGCTTGGAACATGAC+TGG | 0.603670 | 3_3:-49969401 | Msa0456390:exon |
| GAAGGGTCACACTGATAGTG+TGG | 0.604053 | 3_3:-49973813 | Msa0456390:five_prime_UTR |
| TCTGAATATTGCTAGTTGCA+AGG | 0.606952 | 3_3:-49967898 | Msa0456390:three_prime_UTR |
| GTTCGCATTCTTAACTACCA+AGG | 0.610708 | 3_3:+49967957 | None:intergenic |
| AGGTTACTACATGGGCATGT+GGG | 0.610892 | 3_3:+49974917 | None:intergenic |
| CAATAAGATCGGGATGTTTG+GGG | 0.614895 | 3_3:+49973774 | None:intergenic |
| ATGGGTCCGTCCCTGCGTAG+CGG | 0.627350 | 3_3:-49975317 | None:intergenic |
| GATGGGACTCATGTAGCTGT+CGG | 0.632901 | 3_3:-49973465 | Msa0456390:intron |
| AACAAGTATCAGGCTGACGA+AGG | 0.633197 | 3_3:-49968123 | Msa0456390:intron |
| ACATCACCTACAAACCTGAT+GGG | 0.634892 | 3_3:-49973482 | Msa0456390:five_prime_UTR |
| GTTTGAAAAGGTGCATTCAG+TGG | 0.648774 | 3_3:-49975010 | Msa0456390:intron |
| CTGCCATGAATAGTGTTGAG+TGG | 0.656405 | 3_3:-49968188 | Msa0456390:CDS |
| TTGCAATTGACCCAACAGGA+AGG | 0.660962 | 3_3:-49969148 | Msa0456390:intron |
| GCTCACGTACTCAGGGACTG+TGG | 0.668767 | 3_3:-49969240 | Msa0456390:intron |
| AATAACCCACAAGCTGACAA+GGG | 0.681570 | 3_3:+49968946 | None:intergenic |
| CAACTGTGATTGTCGTACGA+TGG | 0.683625 | 3_3:+49975253 | None:intergenic |
| TGAGCCATGAGAGTATCAAG+AGG | 0.696186 | 3_3:+49969191 | None:intergenic |
| GCCGTGTCTCAAGAAAGCCA+TGG | 0.698948 | 3_3:-49975231 | Msa0456390:five_prime_UTR |
| GTAGTTAAGAATGCGAACGA+AGG | 0.700961 | 3_3:-49967952 | Msa0456390:three_prime_UTR |
| GACAGTCCAATGTTCATACG+GGG | 0.704919 | 3_3:-49968239 | Msa0456390:intron |
| AATTAGTTTCAACCATACTG+GGG | 0.712478 | 3_3:-49968762 | Msa0456390:CDS |
| ACAACAGGCAGAACTTAGTG+GGG | 0.714393 | 3_3:-49973514 | Msa0456390:five_prime_UTR |
| GTGTCTCAAGAAAGCCATGG+AGG | 0.714934 | 3_3:-49975228 | Msa0456390:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTCATTTATGTTTATT+CGG | + | chr3_3:49969332-49969351 | None:intergenic | 10.0% |
| !! | TTAAAATTGTATATTTCTTA+TGG | + | chr3_3:49969889-49969908 | None:intergenic | 10.0% |
| !! | TTTAATGAAATATTGAAAAT+AGG | - | chr3_3:49969904-49969923 | Msa0456390:intron | 10.0% |
| !!! | ATATTTTCTGTAAAATAATT+AGG | + | chr3_3:49970178-49970197 | None:intergenic | 10.0% |
| !! | ATATAATGATGATATATATT+TGG | + | chr3_3:49973908-49973927 | None:intergenic | 10.0% |
| !!! | AAAAAATTAGATATTTTACA+AGG | + | chr3_3:49974268-49974287 | None:intergenic | 10.0% |
| !! | TAAAAAAATATGTATATTAC+AGG | - | chr3_3:49974485-49974504 | Msa0456390:intron | 10.0% |
| !!! | TAATTTTTAATACCTTATTT+AGG | - | chr3_3:49975195-49975214 | Msa0456390:five_prime_UTR | 10.0% |
| !! | AGAAAATTAAAGCATAATTA+GGG | + | chr3_3:49968020-49968039 | None:intergenic | 15.0% |
| !! | TAGAAAATTAAAGCATAATT+AGG | + | chr3_3:49968021-49968040 | None:intergenic | 15.0% |
| !! | TTATATTCATAAGTCATTAT+GGG | + | chr3_3:49968157-49968176 | None:intergenic | 15.0% |
| !! | TTTATATTCATAAGTCATTA+TGG | + | chr3_3:49968158-49968177 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr3_3:49968444-49968463 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr3_3:49968445-49968464 | None:intergenic | 15.0% |
| !! | AAAGTGAAATATATTGTATT+GGG | + | chr3_3:49968485-49968504 | None:intergenic | 15.0% |
| !! | AAAAGTGAAATATATTGTAT+TGG | + | chr3_3:49968486-49968505 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr3_3:49968509-49968528 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr3_3:49968510-49968529 | None:intergenic | 15.0% |
| !!! | TTTTTAATTAATCATACAGA+AGG | - | chr3_3:49969230-49969249 | Msa0456390:intron | 15.0% |
| !!! | TTTTAATTAATCATACAGAA+GGG | - | chr3_3:49969231-49969250 | Msa0456390:intron | 15.0% |
| !!! | TATTATGAGCTTTTATATTT+TGG | - | chr3_3:49969262-49969281 | Msa0456390:intron | 15.0% |
| !!! | ATTATGAGCTTTTATATTTT+GGG | - | chr3_3:49969263-49969282 | Msa0456390:intron | 15.0% |
| !! | TAAAATTATGTAATCAAAGA+TGG | + | chr3_3:49973290-49973309 | None:intergenic | 15.0% |
| !!! | TTTTTACTTAAACATGTTTT+TGG | - | chr3_3:49974241-49974260 | Msa0456390:intron | 15.0% |
| !!! | TAATTTTTTCCTACTTGTTA+AGG | - | chr3_3:49967797-49967816 | Msa0456390:three_prime_UTR | 20.0% |
| !! | TTTAATATCTAGGTTTATGT+TGG | - | chr3_3:49967820-49967839 | Msa0456390:three_prime_UTR | 20.0% |
| !! | AAACATAAACATTGAAAAGA+GGG | + | chr3_3:49967852-49967871 | None:intergenic | 20.0% |
| !!! | TTTATGTTTCAATTCTGAAA+TGG | - | chr3_3:49967863-49967882 | Msa0456390:three_prime_UTR | 20.0% |
| !!! | TTATGTTTCAATTCTGAAAT+GGG | - | chr3_3:49967864-49967883 | Msa0456390:three_prime_UTR | 20.0% |
| !! | GAAAATTAAAGCATAATTAG+GGG | + | chr3_3:49968019-49968038 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr3_3:49968375-49968394 | None:intergenic | 20.0% |
| !!! | GTAGTATATAATTTAAGATC+CGG | - | chr3_3:49968577-49968596 | Msa0456390:intron | 20.0% |
| !! | AAAACTAAAAGAAAATCTGT+TGG | + | chr3_3:49968956-49968975 | None:intergenic | 20.0% |
| !! | GAGACATTTAATATAATCTA+TGG | - | chr3_3:49969285-49969304 | Msa0456390:intron | 20.0% |
| !! | AAAAAGAGCAAGATAATAAT+AGG | + | chr3_3:49969632-49969651 | None:intergenic | 20.0% |
| !!! | TTACTTATTTCCCTTTTAAT+TGG | - | chr3_3:49970302-49970321 | Msa0456390:intron | 20.0% |
| !! | CAAATTTCTACCAATTAAAA+GGG | + | chr3_3:49970315-49970334 | None:intergenic | 20.0% |
| !!! | AAATTTATGGTTGATTCTAA+TGG | + | chr3_3:49970375-49970394 | None:intergenic | 20.0% |
| !! | TCATAATTTAAAAAGTAGCA+AGG | + | chr3_3:49973582-49973601 | None:intergenic | 20.0% |
| !! | AAACAAACAAAAAATAGTTG+AGG | + | chr3_3:49973606-49973625 | None:intergenic | 20.0% |
| !!! | TTTTAGTCCATTTTGTTATA+AGG | - | chr3_3:49974291-49974310 | Msa0456390:intron | 20.0% |
| !!! | TTTAGTCCATTTTGTTATAA+GGG | - | chr3_3:49974292-49974311 | Msa0456390:intron | 20.0% |
| !!! | GAAAATGGTTTAAATGTTTT+TGG | + | chr3_3:49974567-49974586 | None:intergenic | 20.0% |
| !!! | AAATGGGATTTTTAAGATTT+TGG | - | chr3_3:49975092-49975111 | Msa0456390:intron | 20.0% |
| !!! | TAATACCTTATTTAGGATTT+CGG | - | chr3_3:49975202-49975221 | Msa0456390:five_prime_UTR | 20.0% |
| ! | GGAAAAAATTAGAACTTTGA+AGG | + | chr3_3:49967788-49967807 | None:intergenic | 25.0% |
| ! | GATATTAAACCTTAACAAGT+AGG | + | chr3_3:49967809-49967828 | None:intergenic | 25.0% |
| ! | CTTGTTAAGGTTTAATATCT+AGG | - | chr3_3:49967810-49967829 | Msa0456390:three_prime_UTR | 25.0% |
| ! | GAAACATAAACATTGAAAAG+AGG | + | chr3_3:49967853-49967872 | None:intergenic | 25.0% |
| ! | TTTCTCATCAATCACAATAT+TGG | - | chr3_3:49968054-49968073 | Msa0456390:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr3_3:49968376-49968395 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr3_3:49968397-49968416 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr3_3:49968398-49968417 | None:intergenic | 25.0% |
| ! | TTTCCTACAGTAATTTCAAA+AGG | + | chr3_3:49968603-49968622 | None:intergenic | 25.0% |
| !!! | TCTAACATTACTGTCATTTT+AGG | + | chr3_3:49968769-49968788 | None:intergenic | 25.0% |
| ! | GCATTAAATCAAGAAATACA+TGG | - | chr3_3:49968818-49968837 | Msa0456390:intron | 25.0% |
| ! | AGAAATTTGATTGTTCCATT+TGG | - | chr3_3:49969033-49969052 | Msa0456390:intron | 25.0% |
| ! | GTCAAAGATATTGAATTGAA+GGG | - | chr3_3:49969078-49969097 | Msa0456390:intron | 25.0% |
| ! | AGTTAACAATACTTGATGTT+CGG | - | chr3_3:49969697-49969716 | Msa0456390:intron | 25.0% |
| ! | ATTTCACATTTCTCTTCTAT+AGG | + | chr3_3:49969854-49969873 | None:intergenic | 25.0% |
| ! | ATAGAAGAGAAATGTGAAAT+CGG | - | chr3_3:49969854-49969873 | Msa0456390:intron | 25.0% |
| ! | TAACTGGTAAAGTAAGTTAA+GGG | + | chr3_3:49970060-49970079 | None:intergenic | 25.0% |
| ! | TTAACTGGTAAAGTAAGTTA+AGG | + | chr3_3:49970061-49970080 | None:intergenic | 25.0% |
| ! | TCTGTAAAATAATTAGGATG+TGG | + | chr3_3:49970172-49970191 | None:intergenic | 25.0% |
| !! | GAAATTTTACAGTTTGAGAA+CGG | - | chr3_3:49970251-49970270 | Msa0456390:intron | 25.0% |
| !! | AAATTTTACAGTTTGAGAAC+GGG | - | chr3_3:49970252-49970271 | Msa0456390:intron | 25.0% |
| ! | GCAAATTTCTACCAATTAAA+AGG | + | chr3_3:49970316-49970335 | None:intergenic | 25.0% |
| ! | ACAACAAACATGCAAATTTA+TGG | + | chr3_3:49970388-49970407 | None:intergenic | 25.0% |
| !!! | TCTATTTTTAACAGATGATC+AGG | + | chr3_3:49970440-49970459 | None:intergenic | 25.0% |
| ! | TCTGATAAGCTACATAAATT+TGG | + | chr3_3:49970549-49970568 | None:intergenic | 25.0% |
| ! | AACAGAAATGGAATTAATAG+AGG | - | chr3_3:49970684-49970703 | Msa0456390:intron | 25.0% |
| ! | TTTCACAAACAAGAAAACTA+TGG | - | chr3_3:49971941-49971960 | Msa0456390:intron | 25.0% |
| ! | ATGATTTCGAAGTTGTTATA+AGG | + | chr3_3:49972536-49972555 | Msa0456410:CDS | 25.0% |
| ! | ATCATTGTGTTAGAAACTTA+CGG | + | chr3_3:49972938-49972957 | None:intergenic | 25.0% |
| ! | ATCATATTGAATGATGTTGA+AGG | + | chr3_3:49973204-49973223 | None:intergenic | 25.0% |
| ! | ATAAACAAACATGGAAGTTA+GGG | + | chr3_3:49974035-49974054 | None:intergenic | 25.0% |
| ! | AATAAACAAACATGGAAGTT+AGG | + | chr3_3:49974036-49974055 | None:intergenic | 25.0% |
| ! | CTGAATACAATAAACAAACA+TGG | + | chr3_3:49974044-49974063 | None:intergenic | 25.0% |
| !!! | TTAGTCCATTTTGTTATAAG+GGG | - | chr3_3:49974293-49974312 | Msa0456390:intron | 25.0% |
| ! | GGACTAAAAACAAAATAATG+AGG | - | chr3_3:49974506-49974525 | Msa0456390:intron | 25.0% |
| ! | AATAATGAGGACAAAAATGA+AGG | - | chr3_3:49974519-49974538 | Msa0456390:intron | 25.0% |
| ! | TGAAGGAAAAAACAAATTAC+AGG | - | chr3_3:49974536-49974555 | Msa0456390:intron | 25.0% |
| ! | GAAGGAAAAAACAAATTACA+GGG | - | chr3_3:49974537-49974556 | Msa0456390:intron | 25.0% |
| !! | TGTTTAAGCAAATTTTTGTC+TGG | + | chr3_3:49974589-49974608 | None:intergenic | 25.0% |
| !! | TATGCAAGTACATTGTATTT+TGG | + | chr3_3:49974749-49974768 | None:intergenic | 25.0% |
| !!! | TTTTGAAAATGCTTAGTACT+TGG | - | chr3_3:49974913-49974932 | Msa0456390:intron | 25.0% |
| ! | TCTTCACAGAAAATATGAAA+TGG | - | chr3_3:49975075-49975094 | Msa0456390:intron | 25.0% |
| ! | CTTCACAGAAAATATGAAAT+GGG | - | chr3_3:49975076-49975095 | Msa0456390:intron | 25.0% |
| ! | GGTATTAAAAATTAACTACC+AGG | + | chr3_3:49975189-49975208 | None:intergenic | 25.0% |
| !! | AATACCTTATTTAGGATTTC+GGG | - | chr3_3:49975203-49975222 | Msa0456390:five_prime_UTR | 25.0% |
| !! | ATTAGAACTTTGAAGGTGTT+TGG | + | chr3_3:49967781-49967800 | None:intergenic | 30.0% |
| ! | GTCTTTGTTTGTGTTTGAAA+AGG | - | chr3_3:49967886-49967905 | Msa0456390:three_prime_UTR | 30.0% |
| TTAAAGCATAATTAGGGGTA+AGG | + | chr3_3:49968014-49968033 | None:intergenic | 30.0% | |
| ! | CAATATTGGTGTTTGAACTT+TGG | - | chr3_3:49968068-49968087 | Msa0456390:intron | 30.0% |
| GGGAATCTAATGAAATAAAC+TGG | + | chr3_3:49968137-49968156 | None:intergenic | 30.0% | |
| ATTCGAGATAAACTACTCTA+GGG | + | chr3_3:49968194-49968213 | None:intergenic | 30.0% | |
| TATTCGAGATAAACTACTCT+AGG | + | chr3_3:49968195-49968214 | None:intergenic | 30.0% | |
| CATTCATCAGAAGTGAAAAT+GGG | + | chr3_3:49968662-49968681 | None:intergenic | 30.0% | |
| TCATTCATCAGAAGTGAAAA+TGG | + | chr3_3:49968663-49968682 | None:intergenic | 30.0% | |
| AACATATGATGTAGTTGCTT+TGG | - | chr3_3:49968731-49968750 | Msa0456390:CDS | 30.0% | |
| CGAATCATGTATGATAAGAT+AGG | - | chr3_3:49968841-49968860 | Msa0456390:intron | 30.0% | |
| TGAAGCTATAGAGTAAACTA+AGG | - | chr3_3:49968880-49968899 | Msa0456390:intron | 30.0% | |
| !! | TCATCCTTCTCATTATTTTG+TGG | - | chr3_3:49969008-49969027 | Msa0456390:intron | 30.0% |
| CTATCCACAAAATAATGAGA+AGG | + | chr3_3:49969015-49969034 | None:intergenic | 30.0% | |
| AATTTGATTGTTCCATTTGG+TGG | - | chr3_3:49969036-49969055 | Msa0456390:intron | 30.0% | |
| ATTTGATTGTTCCATTTGGT+GGG | - | chr3_3:49969037-49969056 | Msa0456390:intron | 30.0% | |
| GGTCAAAGATATTGAATTGA+AGG | - | chr3_3:49969077-49969096 | Msa0456390:intron | 30.0% | |
| TAATTAATCATACAGAAGGG+AGG | - | chr3_3:49969234-49969253 | Msa0456390:intron | 30.0% | |
| ! | TCCTTATATTTGATTTCGAC+AGG | - | chr3_3:49969359-49969378 | Msa0456390:intron | 30.0% |
| ACCTGTCGAAATCAAATATA+AGG | + | chr3_3:49969363-49969382 | None:intergenic | 30.0% | |
| ! | TTATATTTGATTTCGACAGG+TGG | - | chr3_3:49969362-49969381 | Msa0456390:intron | 30.0% |
| GAATTGAATCAAACATATGC+TGG | + | chr3_3:49969554-49969573 | None:intergenic | 30.0% | |
| !!! | ACTTTTTCGTTGGCTTTTAT+AGG | - | chr3_3:49969668-49969687 | Msa0456390:intron | 30.0% |
| ! | GAGAAAGAATTTTCCCTTAA+GGG | - | chr3_3:49969926-49969945 | Msa0456390:intron | 30.0% |
| GTATTGAGTAAACAAAACAG+TGG | + | chr3_3:49969972-49969991 | None:intergenic | 30.0% | |
| ATACTAACCATTCTGAATGA+TGG | - | chr3_3:49969988-49970007 | Msa0456390:intron | 30.0% | |
| TACTAACCATTCTGAATGAT+GGG | - | chr3_3:49969989-49970008 | Msa0456390:intron | 30.0% | |
| AACTGGTAAAGTAAGTTAAG+GGG | + | chr3_3:49970059-49970078 | None:intergenic | 30.0% | |
| AGAGAATGGGAAATTAGTTA+GGG | + | chr3_3:49970097-49970116 | None:intergenic | 30.0% | |
| AAGAGAATGGGAAATTAGTT+AGG | + | chr3_3:49970098-49970117 | None:intergenic | 30.0% | |
| GAAATGGAATTAATAGAGGA+AGG | - | chr3_3:49970688-49970707 | Msa0456390:intron | 30.0% | |
| AAAACACTTTCTCTTTACTG+AGG | + | chr3_3:49970770-49970789 | None:intergenic | 30.0% | |
| TAGGAAAAAGAAGAAAGAGA+TGG | + | chr3_3:49970899-49970918 | None:intergenic | 30.0% | |
| AAAGAGAGTAGCATGTAAAA+TGG | + | chr3_3:49971137-49971156 | None:intergenic | 30.0% | |
| TACAAAATCATTCAGAGGAT+AGG | + | chr3_3:49971355-49971374 | Msa0456400:CDS | 30.0% | |
| ! | ATCCTCTGAATGATTTTGTA+AGG | - | chr3_3:49971355-49971374 | Msa0456390:intron | 30.0% |
| !! | AATACCACTTTTCATGTCTA+CGG | + | chr3_3:49971677-49971696 | None:intergenic | 30.0% |
| !! | ATATCTTTGTTGTTTCGTGT+TGG | + | chr3_3:49971754-49971773 | None:intergenic | 30.0% |
| GATGGTTAATCATTGTTTAG+AGG | + | chr3_3:49971778-49971797 | None:intergenic | 30.0% | |
| ! | TTTCTTGTTTGTGAAAGACA+TGG | + | chr3_3:49971937-49971956 | Msa0456410:CDS | 30.0% |
| CTATAGCTGGTACATTATAT+TGG | + | chr3_3:49972216-49972235 | Msa0456410:intron | 30.0% | |
| ATAATGTACCAGCTATAGTA+TGG | - | chr3_3:49972218-49972237 | Msa0456390:intron | 30.0% | |
| ! | ATTTTCCTTCAACTCCTAAT+GGG | + | chr3_3:49972246-49972265 | Msa0456410:intron | 30.0% |
| CCTTAATTTCTTATCCCATT+TGG | + | chr3_3:49972450-49972469 | Msa0456410:intron | 30.0% | |
| CCAAATGGGATAAGAAATTA+AGG | - | chr3_3:49972447-49972466 | Msa0456390:intron | 30.0% | |
| TCGAAGTTGTTATAAGGTTA+AGG | + | chr3_3:49972530-49972549 | Msa0456410:CDS | 30.0% | |
| ! | TAGGAAGTTTGTGGTATTTT+CGG | + | chr3_3:49972638-49972657 | None:intergenic | 30.0% |
| TCTTATAAGCTACATCTAAC+TGG | + | chr3_3:49972682-49972701 | None:intergenic | 30.0% | |
| ATTTAACAGTGCATGTTCTT+TGG | - | chr3_3:49972721-49972740 | Msa0456390:intron | 30.0% | |
| GACAACAGAAATGGAATTAA+TGG | - | chr3_3:49970681-49970700 | Msa0456390:intron | 30.0% | |
| AACAGAAATGGAATTAATGG+AGG | - | chr3_3:49972815-49972834 | Msa0456390:intron | 30.0% | |
| AAAACACTTTCTCTTTACTG+AGG | + | chr3_3:49970770-49970789 | None:intergenic | 30.0% | |
| ACATTAACTCCAAAAAGATC+TGG | + | chr3_3:49973267-49973286 | None:intergenic | 30.0% | |
| TTCTTTCTAACAACAGGAAA+TGG | - | chr3_3:49973537-49973556 | Msa0456390:intron | 30.0% | |
| !!! | GTATTCAGCTTTGTTTTTTG+AGG | - | chr3_3:49974056-49974075 | Msa0456390:intron | 30.0% |
| AGAATGATATGTTTCTCAGA+TGG | - | chr3_3:49974112-49974131 | Msa0456390:intron | 30.0% | |
| TATGGTTGAAACTAATTGTC+CGG | + | chr3_3:49974143-49974162 | None:intergenic | 30.0% | |
| ! | ACAATTAGTTTCAACCATAC+TGG | - | chr3_3:49974144-49974163 | Msa0456390:intron | 30.0% |
| ! | CAATTAGTTTCAACCATACT+GGG | - | chr3_3:49974145-49974164 | Msa0456390:intron | 30.0% |
| ! | AATTAGTTTCAACCATACTG+GGG | - | chr3_3:49974146-49974165 | Msa0456390:intron | 30.0% |
| TGCATAAACCAAAACAAAAC+AGG | + | chr3_3:49974352-49974371 | None:intergenic | 30.0% | |
| AAGGATTAAAGCGGAAAAAA+TGG | + | chr3_3:49974427-49974446 | None:intergenic | 30.0% | |
| CATTCATACAAGGATTAAAG+CGG | + | chr3_3:49974436-49974455 | None:intergenic | 30.0% | |
| TGTTTAAGCTCATTCATACA+AGG | + | chr3_3:49974446-49974465 | None:intergenic | 30.0% | |
| ! | GCAAATTTTTGTCTGGAAAA+TGG | + | chr3_3:49974582-49974601 | None:intergenic | 30.0% |
| AGTACATCATATTCCTTGTA+GGG | - | chr3_3:49974697-49974716 | Msa0456390:intron | 30.0% | |
| AGATGACAAAAACAAGTATC+AGG | - | chr3_3:49974775-49974794 | Msa0456390:intron | 30.0% | |
| !!! | TCAGTCTATTTTAGCATCAA+TGG | - | chr3_3:49975127-49975146 | Msa0456390:intron | 30.0% |
| ! | TTTTCCCGAAATCCTAAATA+AGG | + | chr3_3:49975210-49975229 | None:intergenic | 30.0% |
| CTTTCTTAAACAATGTCTCA+TGG | + | chr3_3:49975272-49975291 | None:intergenic | 30.0% | |
| ! | GATTCGAAGCTAGGAATTTT+GGG | + | chr3_3:49967632-49967651 | None:intergenic | 35.0% |
| AAATGAGAATTGTTCCTCCA+TGG | + | chr3_3:49967697-49967716 | None:intergenic | 35.0% | |
| TTGATCAAACTGCTCGAATT+TGG | - | chr3_3:49967960-49967979 | Msa0456390:three_prime_UTR | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr3_3:49968362-49968381 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr3_3:49968531-49968550 | Msa0456390:intron | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | - | chr3_3:49968544-49968563 | Msa0456390:intron | 35.0% | |
| CAAAGTAGGTCAATTAAACC+GGG | - | chr3_3:49968545-49968564 | Msa0456390:intron | 35.0% | |
| CTACAGTAATTTCAAAAGGC+CGG | + | chr3_3:49968599-49968618 | None:intergenic | 35.0% | |
| TACTGTAGGAAACTTACTGT+AGG | - | chr3_3:49968611-49968630 | Msa0456390:intron | 35.0% | |
| TGAGATTACATGACCATTAG+AGG | - | chr3_3:49968680-49968699 | Msa0456390:intron | 35.0% | |
| CTCAAAGACAAATCCTCTAA+TGG | + | chr3_3:49968696-49968715 | None:intergenic | 35.0% | |
| !!! | ACTGTCATTTTAGGTCATGA+AGG | + | chr3_3:49968760-49968779 | None:intergenic | 35.0% |
| GCGACAAGTTTCAATCTTAA+TGG | + | chr3_3:49968800-49968819 | None:intergenic | 35.0% | |
| ! | TTTGATTGTTCCATTTGGTG+GGG | - | chr3_3:49969038-49969057 | Msa0456390:intron | 35.0% |
| TAAAATAAACCCCCACCAAA+TGG | + | chr3_3:49969051-49969070 | None:intergenic | 35.0% | |
| !! | ATTTGGTGGGGGTTTATTTT+AGG | - | chr3_3:49969050-49969069 | Msa0456390:intron | 35.0% |
| !!! | TTTGGTGGGGGTTTATTTTA+GGG | - | chr3_3:49969051-49969070 | Msa0456390:intron | 35.0% |
| CATTTATGTTTATTCGGCAC+AGG | + | chr3_3:49969326-49969345 | None:intergenic | 35.0% | |
| !! | TCAGAGCTTTAAGCAATGAA+GGG | + | chr3_3:49969490-49969509 | None:intergenic | 35.0% |
| !! | TTCAGAGCTTTAAGCAATGA+AGG | + | chr3_3:49969491-49969510 | None:intergenic | 35.0% |
| CAAACATATGCTGGATATAG+TGG | + | chr3_3:49969545-49969564 | None:intergenic | 35.0% | |
| GAGCAAGATAATAATAGGCA+TGG | + | chr3_3:49969627-49969646 | None:intergenic | 35.0% | |
| ACGAAAAAGTAAGACTTCAC+AGG | + | chr3_3:49969658-49969677 | None:intergenic | 35.0% | |
| !!! | GTGAAGTCTTACTTTTTCGT+TGG | - | chr3_3:49969658-49969677 | Msa0456390:intron | 35.0% |
| GGAAATTCAAACCAATGCAT+AGG | - | chr3_3:49969718-49969737 | Msa0456390:intron | 35.0% | |
| CTGCCAGTTTAATACGTATT+TGG | - | chr3_3:49969802-49969821 | Msa0456390:intron | 35.0% | |
| CCTCCAAATACGTATTAAAC+TGG | + | chr3_3:49969808-49969827 | None:intergenic | 35.0% | |
| CCAGTTTAATACGTATTTGG+AGG | - | chr3_3:49969805-49969824 | Msa0456390:intron | 35.0% | |
| ! | GGAGAAAGAATTTTCCCTTA+AGG | - | chr3_3:49969925-49969944 | Msa0456390:intron | 35.0% |
| AAACAGTGGCTCAGTTATAT+GGG | + | chr3_3:49969958-49969977 | None:intergenic | 35.0% | |
| AAAACAGTGGCTCAGTTATA+TGG | + | chr3_3:49969959-49969978 | None:intergenic | 35.0% | |
| ATGATTCCCATCATTCAGAA+TGG | + | chr3_3:49969998-49970017 | None:intergenic | 35.0% | |
| GAGAATGGGAAATTAGTTAG+GGG | + | chr3_3:49970096-49970115 | None:intergenic | 35.0% | |
| ATTCTAATGGTTTGACACCA+GGG | + | chr3_3:49970362-49970381 | None:intergenic | 35.0% | |
| TAACAGATGATCAGGTTTCA+AGG | + | chr3_3:49970432-49970451 | None:intergenic | 35.0% | |
| TAAAGCAGAGACAACAGAAA+TGG | - | chr3_3:49970672-49970691 | Msa0456390:intron | 35.0% | |
| GGAAGGCTATTGAATTATGA+TGG | - | chr3_3:49970705-49970724 | Msa0456390:intron | 35.0% | |
| AAAACTGAGTACAATTCCAG+CGG | - | chr3_3:49970737-49970756 | Msa0456390:intron | 35.0% | |
| GAATCATTGTGTTAGAACCT+CGG | + | chr3_3:49970807-49970826 | None:intergenic | 35.0% | |
| AGAATCTTCCCCTAATAAGA+GGG | + | chr3_3:49970840-49970859 | None:intergenic | 35.0% | |
| TAGAATCTTCCCCTAATAAG+AGG | + | chr3_3:49970841-49970860 | None:intergenic | 35.0% | |
| AAAAGAAGAAAGAGATGGTG+AGG | + | chr3_3:49970894-49970913 | None:intergenic | 35.0% | |
| AAAGCTAGTGTTAATGGTGT+GGG | + | chr3_3:49971034-49971053 | None:intergenic | 35.0% | |
| GCATGTAAAATGGAAAGGAA+TGG | + | chr3_3:49971127-49971146 | None:intergenic | 35.0% | |
| GAGTAGCATGTAAAATGGAA+AGG | + | chr3_3:49971132-49971151 | None:intergenic | 35.0% | |
| ! | AGTGATTTGATAGTCAACGA+TGG | - | chr3_3:49971251-49971270 | Msa0456390:intron | 35.0% |
| AGCTGAGACACATGAAAAAT+AGG | - | chr3_3:49971283-49971302 | Msa0456390:intron | 35.0% | |
| GCTGAGACACATGAAAAATA+GGG | - | chr3_3:49971284-49971303 | Msa0456390:intron | 35.0% | |
| GTCCTTACAAAATCATTCAG+AGG | + | chr3_3:49971360-49971379 | Msa0456400:CDS | 35.0% | |
| TTCTTAAATTGAGACCCCAT+AGG | + | chr3_3:49971435-49971454 | Msa0456400:CDS | 35.0% | |
| AAGGATATTCAGTTTGCAGT+CGG | + | chr3_3:49971469-49971488 | Msa0456400:CDS | 35.0% | |
| AGCATTATACCAACAAGAAG+CGG | + | chr3_3:49971492-49971511 | Msa0456400:CDS | 35.0% | |
| !!! | TTTTTTGGAAGGGGAAACAA+GGG | + | chr3_3:49971602-49971621 | Msa0456400:CDS | 35.0% |
| !!! | ATTTTTTGGAAGGGGAAACA+AGG | + | chr3_3:49971603-49971622 | Msa0456400:CDS | 35.0% |
| !! | ATACCACTTTTCATGTCTAC+GGG | + | chr3_3:49971676-49971695 | None:intergenic | 35.0% |
| !! | AACCATTATTTTCTGGAAGG+AGG | + | chr3_3:49971872-49971891 | Msa0456410:intron | 35.0% |
| ! | GAGAACCATTATTTTCTGGA+AGG | + | chr3_3:49971875-49971894 | Msa0456410:intron | 35.0% |
| ! | GATGGAGAACCATTATTTTC+TGG | + | chr3_3:49971879-49971898 | Msa0456410:intron | 35.0% |
| CCAGAATCTATTCAAAGTGA+TGG | + | chr3_3:49971897-49971916 | Msa0456410:intron | 35.0% | |
| CCATCACTTTGAATAGATTC+TGG | - | chr3_3:49971894-49971913 | Msa0456390:intron | 35.0% | |
| AAAGACATGGTTCGATTACA+CGG | + | chr3_3:49971924-49971943 | Msa0456410:intron | 35.0% | |
| AAAACTATGGAAGCTGTGAA+AGG | - | chr3_3:49971954-49971973 | Msa0456390:intron | 35.0% | |
| AAACTATGGAAGCTGTGAAA+GGG | - | chr3_3:49971955-49971974 | Msa0456390:intron | 35.0% | |
| ATTCCTATGGACTTCATTAC+CGG | + | chr3_3:49972066-49972085 | Msa0456410:intron | 35.0% | |
| ! | AAGAGTACAAGAACTTGTGT+GGG | + | chr3_3:49972179-49972198 | Msa0456410:intron | 35.0% |
| ! | TTTTCCTTCAACTCCTAATG+GGG | + | chr3_3:49972245-49972264 | Msa0456410:intron | 35.0% |
| ! | GATTTTCCTTCAACTCCTAA+TGG | + | chr3_3:49972247-49972266 | Msa0456410:intron | 35.0% |
| ! | TCTCATTGATGTGTTGTTGA+AGG | + | chr3_3:49972269-49972288 | Msa0456410:intron | 35.0% |
| TTCAACAACACATCAATGAG+AGG | - | chr3_3:49972268-49972287 | Msa0456390:intron | 35.0% | |
| TCAACAACACATCAATGAGA+GGG | - | chr3_3:49972269-49972288 | Msa0456390:intron | 35.0% | |
| !! | GGAGGAGTTCTTTTCTAAAA+GGG | + | chr3_3:49972319-49972338 | Msa0456410:intron | 35.0% |
| ! | AGGAGGAGTTCTTTTCTAAA+AGG | + | chr3_3:49972320-49972339 | Msa0456410:intron | 35.0% |
| ACAAGGTAAGGAGTTACAAA+TGG | + | chr3_3:49972425-49972444 | Msa0456410:intron | 35.0% | |
| AGTGGATGGCTAAACTAATT+GGG | + | chr3_3:49972561-49972580 | Msa0456410:CDS | 35.0% | |
| ! | TTTCGGGTCAAAAAAGTTTG+AGG | + | chr3_3:49972621-49972640 | None:intergenic | 35.0% |
| ! | AGGAAGTTTGTGGTATTTTC+GGG | + | chr3_3:49972637-49972656 | None:intergenic | 35.0% |
| ! | AGCAGGAACAAGACTTTTTA+TGG | + | chr3_3:49972755-49972774 | None:intergenic | 35.0% |
| TGTGTTAGAAACTTACGGTA+AGG | + | chr3_3:49972933-49972952 | None:intergenic | 35.0% | |
| AGAATCTTCCCCTAATAAGA+GGG | + | chr3_3:49970840-49970859 | None:intergenic | 35.0% | |
| TAGAATCTTCCCCTAATAAG+AGG | + | chr3_3:49970841-49970860 | None:intergenic | 35.0% | |
| AGAAAGAAGAAAGAGATAGC+GGG | + | chr3_3:49973044-49973063 | None:intergenic | 35.0% | |
| GAGAAAGAAGAAAGAGATAG+CGG | + | chr3_3:49973045-49973064 | None:intergenic | 35.0% | |
| TTGAATGATGTTGAAGGAGT+TGG | + | chr3_3:49973198-49973217 | None:intergenic | 35.0% | |
| CATTCAATATGATGCTCTTC+AGG | - | chr3_3:49973211-49973230 | Msa0456390:five_prime_UTR | 35.0% | |
| ACAGGAATCATTGAGCAAAT+TGG | + | chr3_3:49973470-49973489 | None:intergenic | 35.0% | |
| GAGATGTTCTTTCTAACAAC+AGG | - | chr3_3:49973531-49973550 | Msa0456390:intron | 35.0% | |
| ACAACAGGAAATGGTAAGTA+AGG | - | chr3_3:49973546-49973565 | Msa0456390:intron | 35.0% | |
| !! | CTTCTTGTGTTTGTTATTCC+TGG | - | chr3_3:49973788-49973807 | Msa0456390:five_prime_UTR | 35.0% |
| ! | AACTTACTCGAGCTTTGTAA+AGG | + | chr3_3:49974010-49974029 | None:intergenic | 35.0% |
| AGAGACCCCTTATAACAAAA+TGG | + | chr3_3:49974301-49974320 | None:intergenic | 35.0% | |
| !!! | CTAGTCATCCTGTTTTGTTT+TGG | - | chr3_3:49974341-49974360 | Msa0456390:intron | 35.0% |
| CAGTACATCATATTCCTTGT+AGG | - | chr3_3:49974696-49974715 | Msa0456390:intron | 35.0% | |
| ATTCCACTCAACACTATTCA+TGG | + | chr3_3:49974726-49974745 | None:intergenic | 35.0% | |
| TACAATGTACTTGCATATGC+TGG | - | chr3_3:49974752-49974771 | Msa0456390:intron | 35.0% | |
| GGAAACACAAGAATCATATG+AGG | - | chr3_3:49974840-49974859 | Msa0456390:intron | 35.0% | |
| !! | GCAGGTGTTTTTCGAATTTT+TGG | - | chr3_3:49974890-49974909 | Msa0456390:intron | 35.0% |
| TTCTTAACTACCAAGGCAAA+TGG | + | chr3_3:49974947-49974966 | None:intergenic | 35.0% | |
| TCTGAATATTGCTAGTTGCA+AGG | - | chr3_3:49975010-49975029 | Msa0456390:intron | 35.0% | |
| TATCAACCTATGTGCTAAGA+AGG | - | chr3_3:49975051-49975070 | Msa0456390:intron | 35.0% | |
| ! | GGATTCGAAGCTAGGAATTT+TGG | + | chr3_3:49967633-49967652 | None:intergenic | 40.0% |
| !! | CTTCATAGCAGAGAGTATTC+CGG | - | chr3_3:49967723-49967742 | Msa0456390:three_prime_UTR | 40.0% |
| GTATTCCGGTCACAAAAAGA+AGG | - | chr3_3:49967737-49967756 | Msa0456390:three_prime_UTR | 40.0% | |
| ! | TGTTTGGAATGAGAGAGGAA+GGG | + | chr3_3:49967765-49967784 | None:intergenic | 40.0% |
| ! | GTTTGAAAAGGTGCATTCAG+TGG | - | chr3_3:49967898-49967917 | Msa0456390:three_prime_UTR | 40.0% |
| ! | ATTGGCACAAAACTTGCTTC+TGG | - | chr3_3:49967932-49967951 | Msa0456390:three_prime_UTR | 40.0% |
| TAGGGGTAAGGTTACTACAT+GGG | + | chr3_3:49968002-49968021 | None:intergenic | 40.0% | |
| TTAGGGGTAAGGTTACTACA+TGG | + | chr3_3:49968003-49968022 | None:intergenic | 40.0% | |
| !! | ACGGAGGGAGTATTACTTAA+GGG | + | chr3_3:49968338-49968357 | None:intergenic | 40.0% |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr3_3:49968361-49968380 | None:intergenic | 40.0% | |
| CCGGTTTAATTGACCTACTT+TGG | + | chr3_3:49968547-49968566 | None:intergenic | 40.0% | |
| !!! | CGGCCTTTTGAAATTACTGT+AGG | - | chr3_3:49968597-49968616 | Msa0456390:intron | 40.0% |
| ! | TTGATTGTTCCATTTGGTGG+GGG | - | chr3_3:49969039-49969058 | Msa0456390:intron | 40.0% |
| !!! | TGGGGGTTTATTTTAGGGTA+AGG | - | chr3_3:49969056-49969075 | Msa0456390:intron | 40.0% |
| ATAGTGTGGATCAGCTATGT+TGG | - | chr3_3:49969109-49969128 | Msa0456390:intron | 40.0% | |
| TAGTGTGGATCAGCTATGTT+GGG | - | chr3_3:49969110-49969129 | Msa0456390:intron | 40.0% | |
| CAATAAGATCGGGATGTTTG+GGG | + | chr3_3:49969137-49969156 | None:intergenic | 40.0% | |
| GCAATAAGATCGGGATGTTT+GGG | + | chr3_3:49969138-49969157 | None:intergenic | 40.0% | |
| TGCAATAAGATCGGGATGTT+TGG | + | chr3_3:49969139-49969158 | None:intergenic | 40.0% | |
| GAAGCAGTTGCAATAAGATC+GGG | + | chr3_3:49969147-49969166 | None:intergenic | 40.0% | |
| CGAAGCAGTTGCAATAAGAT+CGG | + | chr3_3:49969148-49969167 | None:intergenic | 40.0% | |
| CGATCTTATTGCAACTGCTT+CGG | - | chr3_3:49969146-49969165 | Msa0456390:intron | 40.0% | |
| GATCTTATTGCAACTGCTTC+GGG | - | chr3_3:49969147-49969166 | Msa0456390:intron | 40.0% | |
| TGACAAGACTGTTCGTCTAT+GGG | - | chr3_3:49969170-49969189 | Msa0456390:CDS | 40.0% | |
| AACATCACCTACAAACCTGA+TGG | - | chr3_3:49969425-49969444 | Msa0456390:intron | 40.0% | |
| ACATCACCTACAAACCTGAT+GGG | - | chr3_3:49969426-49969445 | Msa0456390:intron | 40.0% | |
| TCATGTAGCTGTCGGTAATA+GGG | - | chr3_3:49969451-49969470 | Msa0456390:intron | 40.0% | |
| ATATGGGGAACAACCCTTAA+GGG | + | chr3_3:49969942-49969961 | None:intergenic | 40.0% | |
| TATATGGGGAACAACCCTTA+AGG | + | chr3_3:49969943-49969962 | None:intergenic | 40.0% | |
| AACAGTGGCTCAGTTATATG+GGG | + | chr3_3:49969957-49969976 | None:intergenic | 40.0% | |
| ACTTTACCAGTTAACTGCTC+TGG | - | chr3_3:49970067-49970086 | Msa0456390:intron | 40.0% | |
| CTGAGGTGATAGAAGAGAAT+GGG | + | chr3_3:49970110-49970129 | None:intergenic | 40.0% | |
| ! | TCTGAGGTGATAGAAGAGAA+TGG | + | chr3_3:49970111-49970130 | None:intergenic | 40.0% |
| !! | TGCTCATAGTTTTCGAGGTT+TGG | + | chr3_3:49970136-49970155 | None:intergenic | 40.0% |
| ! | CTAGTTGCTCATAGTTTTCG+AGG | + | chr3_3:49970141-49970160 | None:intergenic | 40.0% |
| ! | TTGAGAACGGGCTTATTTGT+TGG | - | chr3_3:49970264-49970283 | Msa0456390:intron | 40.0% |
| GTAGAAATTTGCCTGTCAAC+TGG | - | chr3_3:49970324-49970343 | Msa0456390:intron | 40.0% | |
| ACTTAGTTATGCCAGTTGAC+AGG | + | chr3_3:49970338-49970357 | None:intergenic | 40.0% | |
| GATTCTAATGGTTTGACACC+AGG | + | chr3_3:49970363-49970382 | None:intergenic | 40.0% | |
| CTAGGGTGAATCCTTATAAC+TGG | + | chr3_3:49970506-49970525 | None:intergenic | 40.0% | |
| AAGACTATTTGTGGCGACAA+TGG | + | chr3_3:49970613-49970632 | None:intergenic | 40.0% | |
| AGCAGGAACAAGACTATTTG+TGG | + | chr3_3:49970622-49970641 | None:intergenic | 40.0% | |
| !!! | GAGAAAGTGTTTTCTCTCAC+TGG | - | chr3_3:49970777-49970796 | Msa0456390:intron | 40.0% |
| ACATCTCCCATTACCAAGTT+AGG | - | chr3_3:49970967-49970986 | Msa0456390:intron | 40.0% | |
| ! | TATGGGCCTAACTTGGTAAT+GGG | + | chr3_3:49970976-49970995 | None:intergenic | 40.0% |
| GTGATGGTAGGATCTTGTAT+GGG | + | chr3_3:49970993-49971012 | None:intergenic | 40.0% | |
| TGTGATGGTAGGATCTTGTA+TGG | + | chr3_3:49970994-49971013 | None:intergenic | 40.0% | |
| AAGCTAGTGTTAATGGTGTG+GGG | + | chr3_3:49971033-49971052 | None:intergenic | 40.0% | |
| CAAAGCTAGTGTTAATGGTG+TGG | + | chr3_3:49971035-49971054 | None:intergenic | 40.0% | |
| GAGGACAAAGCTAGTGTTAA+TGG | + | chr3_3:49971040-49971059 | None:intergenic | 40.0% | |
| !! | TAACACTAGCTTTGTCCTCA+AGG | - | chr3_3:49971041-49971060 | Msa0456390:intron | 40.0% |
| GAGACACATGAAAAATAGGG+TGG | - | chr3_3:49971287-49971306 | Msa0456390:intron | 40.0% | |
| AGGATATTCAGTTTGCAGTC+GGG | + | chr3_3:49971468-49971487 | Msa0456400:CDS | 40.0% | |
| AATATCCTTCCGCTTCTTGT+TGG | - | chr3_3:49971480-49971499 | Msa0456390:intron | 40.0% | |
| TTATACCAACAAGAAGCGGA+AGG | + | chr3_3:49971488-49971507 | Msa0456400:CDS | 40.0% | |
| GCTGAAGTATAAACTCCAGA+TGG | + | chr3_3:49971530-49971549 | Msa0456400:CDS | 40.0% | |
| GGAGTTTATACTTCAGCTGA+CGG | - | chr3_3:49971533-49971552 | Msa0456390:intron | 40.0% | |
| !!! | GTTGGTGCATTTTTTGGAAG+GGG | + | chr3_3:49971611-49971630 | Msa0456400:CDS | 40.0% |
| !!! | CGTTGGTGCATTTTTTGGAA+GGG | + | chr3_3:49971612-49971631 | Msa0456400:CDS | 40.0% |
| !!! | ACGTTGGTGCATTTTTTGGA+AGG | + | chr3_3:49971613-49971632 | Msa0456400:CDS | 40.0% |
| !!! | TCTGACGTTGGTGCATTTTT+TGG | + | chr3_3:49971617-49971636 | Msa0456400:CDS | 40.0% |
| AAAAAATGCACCAACGTCAG+AGG | - | chr3_3:49971616-49971635 | Msa0456390:intron | 40.0% | |
| TATCCCATACACAACCTCAA+AGG | - | chr3_3:49971642-49971661 | Msa0456390:intron | 40.0% | |
| ATGGGTTCATTGGATTCCAT+GGG | + | chr3_3:49971718-49971737 | None:intergenic | 40.0% | |
| ATCCAATGAACCCATGACTT+TGG | - | chr3_3:49971723-49971742 | Msa0456390:intron | 40.0% | |
| GACTGACAGACAATTTGAGA+TGG | + | chr3_3:49971796-49971815 | None:intergenic | 40.0% | |
| TCAAATTGTCTGTCAGTCTG+AGG | - | chr3_3:49971798-49971817 | Msa0456390:intron | 40.0% | |
| CAAATTGTCTGTCAGTCTGA+GGG | - | chr3_3:49971799-49971818 | Msa0456390:intron | 40.0% | |
| CACCTCCTTCCAGAAAATAA+TGG | - | chr3_3:49971867-49971886 | Msa0456390:intron | 40.0% | |
| AGGGATAAAGGGGCTATAAT+TGG | - | chr3_3:49971986-49972005 | Msa0456390:intron | 40.0% | |
| ATGATCCACCACTACAAGAA+TGG | - | chr3_3:49972013-49972032 | Msa0456390:intron | 40.0% | |
| ACATGATGCCATTCTTGTAG+TGG | + | chr3_3:49972024-49972043 | Msa0456410:intron | 40.0% | |
| !! | GCATCATGTCCATTGCTTTT+AGG | - | chr3_3:49972035-49972054 | Msa0456390:intron | 40.0% |
| TTCCTATGGACTTCATTACC+GGG | + | chr3_3:49972065-49972084 | Msa0456410:intron | 40.0% | |
| ! | CAAGAGTACAAGAACTTGTG+TGG | + | chr3_3:49972180-49972199 | Msa0456410:intron | 40.0% |
| GCTGGTACATTATATTGGCA+GGG | + | chr3_3:49972211-49972230 | Msa0456410:intron | 40.0% | |
| AGCTGGTACATTATATTGGC+AGG | + | chr3_3:49972212-49972231 | Msa0456410:intron | 40.0% | |
| TTTCCTTCAACTCCTAATGG+GGG | + | chr3_3:49972244-49972263 | Msa0456410:intron | 40.0% | |
| CAACAACACATCAATGAGAG+GGG | - | chr3_3:49972270-49972289 | Msa0456390:intron | 40.0% | |
| !! | GAGTTCTTTTCTAAAAGGGC+AGG | + | chr3_3:49972315-49972334 | Msa0456410:intron | 40.0% |
| !! | TCAAAACTTGGCCTTGAAGT+TGG | - | chr3_3:49972346-49972365 | Msa0456390:intron | 40.0% |
| TTCAGGAGAATCCAACTTCA+AGG | + | chr3_3:49972360-49972379 | Msa0456410:intron | 40.0% | |
| TGAAGTTGGATTCTCCTGAA+TGG | - | chr3_3:49972360-49972379 | Msa0456390:intron | 40.0% | |
| ATCCATCATTGACACCATTC+AGG | + | chr3_3:49972377-49972396 | Msa0456410:intron | 40.0% | |
| GTTACAAATGGAGGATAGCA+AGG | + | chr3_3:49972413-49972432 | Msa0456410:intron | 40.0% | |
| AGGTAAGGAGTTACAAATGG+AGG | + | chr3_3:49972422-49972441 | Msa0456410:intron | 40.0% | |
| TCCTTACCTTGTTGCCAAAT+GGG | - | chr3_3:49972433-49972452 | Msa0456390:intron | 40.0% | |
| TCTTATCCCATTTGGCAACA+AGG | + | chr3_3:49972442-49972461 | Msa0456410:intron | 40.0% | |
| TAACTTCCGCATCTTCATGT+TGG | - | chr3_3:49972473-49972492 | Msa0456390:intron | 40.0% | |
| GTGGATGGCTAAACTAATTG+GGG | + | chr3_3:49972560-49972579 | Msa0456410:CDS | 40.0% | |
| GAGTGGATGGCTAAACTAAT+TGG | + | chr3_3:49972562-49972581 | Msa0456410:CDS | 40.0% | |
| TAGAGCAGAGACAACAGAAA+TGG | - | chr3_3:49972803-49972822 | Msa0456390:intron | 40.0% | |
| TGAGGGGAAAAGAAGTTTCA+GGG | + | chr3_3:49972962-49972981 | None:intergenic | 40.0% | |
| GAAAGAAGAAAGAGATAGCG+GGG | + | chr3_3:49973043-49973062 | None:intergenic | 40.0% | |
| ! | TATGTTGGTGGGTCTCAATA+AGG | + | chr3_3:49973099-49973118 | None:intergenic | 40.0% |
| GTAGAGAGAGATATGTTGGT+GGG | + | chr3_3:49973110-49973129 | None:intergenic | 40.0% | |
| AGTAGAGAGAGATATGTTGG+TGG | + | chr3_3:49973111-49973130 | None:intergenic | 40.0% | |
| ACCAACATATCTCTCTCTAC+TGG | - | chr3_3:49973110-49973129 | Msa0456390:intron | 40.0% | |
| CCAACATATCTCTCTCTACT+GGG | - | chr3_3:49973111-49973130 | Msa0456390:intron | 40.0% | |
| !! | AACATAGATGGTGCTGTGAT+AGG | + | chr3_3:49973154-49973173 | None:intergenic | 40.0% |
| ! | ACAGCACCATCTATGTTTTC+TGG | - | chr3_3:49973157-49973176 | Msa0456390:intron | 40.0% |
| GAGGAACCAGAAAACATAGA+TGG | + | chr3_3:49973166-49973185 | None:intergenic | 40.0% | |
| CCAAAAAGATCTGGCATTTG+TGG | + | chr3_3:49973258-49973277 | None:intergenic | 40.0% | |
| ! | CCACAAATGCCAGATCTTTT+TGG | - | chr3_3:49973255-49973274 | Msa0456390:intron | 40.0% |
| GTAGCACACATTTCTTACTG+TGG | - | chr3_3:49973408-49973427 | Msa0456390:intron | 40.0% | |
| ATGATTCCTGTATCCTTCCT+AGG | - | chr3_3:49973479-49973498 | Msa0456390:five_prime_UTR | 40.0% | |
| CATTTACCTAGGAAGGATAC+AGG | + | chr3_3:49973488-49973507 | None:intergenic | 40.0% | |
| GCAATCTCATTTACCTAGGA+AGG | + | chr3_3:49973495-49973514 | None:intergenic | 40.0% | |
| CCAAGCAATCTCATTTACCT+AGG | + | chr3_3:49973499-49973518 | None:intergenic | 40.0% | |
| CCTAGGTAAATGAGATTGCT+TGG | - | chr3_3:49973496-49973515 | Msa0456390:five_prime_UTR | 40.0% | |
| !! | AGAAGCATTACCTTCCTGTT+GGG | + | chr3_3:49973773-49973792 | None:intergenic | 40.0% |
| !! | AAGAAGCATTACCTTCCTGT+TGG | + | chr3_3:49973774-49973793 | None:intergenic | 40.0% |
| AATAACCCACAAGCTGACAA+GGG | + | chr3_3:49973965-49973984 | None:intergenic | 40.0% | |
| AAATAACCCACAAGCTGACA+AGG | + | chr3_3:49973966-49973985 | None:intergenic | 40.0% | |
| ! | TGTCAGCTTGTGGGTTATTT+CGG | - | chr3_3:49973966-49973985 | Msa0456390:intron | 40.0% |
| TTTCGGAAATGCTTTGTGTG+CGG | - | chr3_3:49973983-49974002 | Msa0456390:intron | 40.0% | |
| TTGAAACTAATTGTCCGGAC+AGG | + | chr3_3:49974138-49974157 | None:intergenic | 40.0% | |
| GTGACAGTCCAATGTTCATA+CGG | - | chr3_3:49974667-49974686 | Msa0456390:intron | 40.0% | |
| TGACAGTCCAATGTTCATAC+GGG | - | chr3_3:49974668-49974687 | Msa0456390:intron | 40.0% | |
| ! | TGTTTTCCCCGTATGAACAT+TGG | + | chr3_3:49974678-49974697 | None:intergenic | 40.0% |
| !! | CTGACGAAGGTATGATCTTT+TGG | - | chr3_3:49974798-49974817 | Msa0456390:intron | 40.0% |
| ! | ACTTGTGTGCATTTTGTTGC+AGG | - | chr3_3:49974872-49974891 | Msa0456390:intron | 40.0% |
| GTTCGCATTCTTAACTACCA+AGG | + | chr3_3:49974954-49974973 | None:intergenic | 40.0% | |
| GTAGTTAAGAATGCGAACGA+AGG | - | chr3_3:49974956-49974975 | Msa0456390:five_prime_UTR | 40.0% | |
| GAAGATCCTTCTTAGCACAT+AGG | + | chr3_3:49975060-49975079 | None:intergenic | 40.0% | |
| GATTTCTTACTTTCAGTGCC+TGG | - | chr3_3:49975168-49975187 | Msa0456390:intron | 40.0% | |
| TGTGATTGTCGTACGATGGA+TGG | + | chr3_3:49967654-49967673 | None:intergenic | 45.0% | |
| CAACTGTGATTGTCGTACGA+TGG | + | chr3_3:49967658-49967677 | None:intergenic | 45.0% | |
| TCCATGGCTTTCTTGAGACA+CGG | + | chr3_3:49967681-49967700 | None:intergenic | 45.0% | |
| ! | GGGTACCTTCTTTTTGTGAC+CGG | + | chr3_3:49967745-49967764 | None:intergenic | 45.0% |
| ! | GTGTTTGGAATGAGAGAGGA+AGG | + | chr3_3:49967766-49967785 | None:intergenic | 45.0% |
| !! | GAAGGTGTTTGGAATGAGAG+AGG | + | chr3_3:49967770-49967789 | None:intergenic | 45.0% |
| ! | AAAAGGTGCATTCAGTGGCT+TGG | - | chr3_3:49967903-49967922 | Msa0456390:three_prime_UTR | 45.0% |
| ! | TCAGTGGCTTGGAATTGCAT+TGG | - | chr3_3:49967914-49967933 | Msa0456390:three_prime_UTR | 45.0% |
| AGGTTACTACATGGGCATGT+GGG | + | chr3_3:49967994-49968013 | None:intergenic | 45.0% | |
| AAGGTTACTACATGGGCATG+TGG | + | chr3_3:49967995-49968014 | None:intergenic | 45.0% | |
| ATGTGTATTCACAGTGCGCT+AGG | + | chr3_3:49968239-49968258 | None:intergenic | 45.0% | |
| !! | GACGGAGGGAGTATTACTTA+AGG | + | chr3_3:49968339-49968358 | None:intergenic | 45.0% |
| GTAGGTCAATTAAACCGGGA+CGG | - | chr3_3:49968549-49968568 | Msa0456390:intron | 45.0% | |
| GTGACAAGACTGTTCGTCTA+TGG | - | chr3_3:49969169-49969188 | Msa0456390:CDS | 45.0% | |
| AGGTGGAAAATGCTCACAAC+AGG | - | chr3_3:49969379-49969398 | Msa0456390:CDS | 45.0% | |
| TCACAACAGGCAGAACTTAG+TGG | - | chr3_3:49969392-49969411 | Msa0456390:exon | 45.0% | |
| CACAACAGGCAGAACTTAGT+GGG | - | chr3_3:49969393-49969412 | Msa0456390:exon | 45.0% | |
| ACAACAGGCAGAACTTAGTG+GGG | - | chr3_3:49969394-49969413 | Msa0456390:exon | 45.0% | |
| ATGAGTCCCATCAGGTTTGT+AGG | + | chr3_3:49969435-49969454 | None:intergenic | 45.0% | |
| CTCATGTAGCTGTCGGTAAT+AGG | - | chr3_3:49969450-49969469 | Msa0456390:intron | 45.0% | |
| TGAAGTGAAGATGCTGTGAC+TGG | - | chr3_3:49969507-49969526 | Msa0456390:intron | 45.0% | |
| TTGAACTTGCGCCTATGCAT+TGG | + | chr3_3:49969732-49969751 | None:intergenic | 45.0% | |
| TAGGCGCAAGTTCAACTATG+AGG | - | chr3_3:49969737-49969756 | Msa0456390:intron | 45.0% | |
| GCAACGATGACGCAAAAACT+AGG | + | chr3_3:49969768-49969787 | None:intergenic | 45.0% | |
| !!! | TTTTCGAGGTTTGGTGTCTG+AGG | + | chr3_3:49970127-49970146 | None:intergenic | 45.0% |
| TTCGTACTCGTCTCTGTCTA+GGG | + | chr3_3:49970523-49970542 | None:intergenic | 45.0% | |
| ATTCGTACTCGTCTCTGTCT+AGG | + | chr3_3:49970524-49970543 | None:intergenic | 45.0% | |
| TGCTTTATCATGCCGAAGGT+GGG | + | chr3_3:49970659-49970678 | None:intergenic | 45.0% | |
| TCTCTGCTTTATCATGCCGA+AGG | + | chr3_3:49970663-49970682 | None:intergenic | 45.0% | |
| ! | CTAATAAGAGGGTGTGTGTG+GGG | + | chr3_3:49970829-49970848 | None:intergenic | 45.0% |
| ! | CCTAATAAGAGGGTGTGTGT+GGG | + | chr3_3:49970830-49970849 | None:intergenic | 45.0% |
| CCACACACACCCTCTTATTA+GGG | - | chr3_3:49970828-49970847 | Msa0456390:intron | 45.0% | |
| CACACACACCCTCTTATTAG+GGG | - | chr3_3:49970829-49970848 | Msa0456390:intron | 45.0% | |
| GAAGAAAGAGATGGTGAGGA+AGG | + | chr3_3:49970890-49970909 | None:intergenic | 45.0% | |
| ! | TTGGTGGGTCTCACTAATGA+GGG | + | chr3_3:49970946-49970965 | None:intergenic | 45.0% |
| ! | GTAATGGGAGATGTGTTGGT+GGG | + | chr3_3:49970961-49970980 | None:intergenic | 45.0% |
| !! | CTTGGTAATGGGAGATGTGT+TGG | + | chr3_3:49970965-49970984 | None:intergenic | 45.0% |
| GTATGGGCCTAACTTGGTAA+TGG | + | chr3_3:49970977-49970996 | None:intergenic | 45.0% | |
| GATCTTGTATGGGCCTAACT+TGG | + | chr3_3:49970983-49971002 | None:intergenic | 45.0% | |
| AGCTAGTGTTAATGGTGTGG+GGG | + | chr3_3:49971032-49971051 | None:intergenic | 45.0% | |
| TTTGTCCTCAAGGCTCAATC+AGG | - | chr3_3:49971051-49971070 | Msa0456390:intron | 45.0% | |
| AGTTTCCTGATTGAGCCTTG+AGG | + | chr3_3:49971059-49971078 | None:intergenic | 45.0% | |
| ATGGAAAGGAATGGCTGAAG+AGG | + | chr3_3:49971118-49971137 | None:intergenic | 45.0% | |
| TGAACGCCTCATATGTTGGA+GGG | + | chr3_3:49971184-49971203 | None:intergenic | 45.0% | |
| TCAATTGGGAGGGAGATAAG+GGG | + | chr3_3:49971218-49971237 | None:intergenic | 45.0% | |
| GTCAATTGGGAGGGAGATAA+GGG | + | chr3_3:49971219-49971238 | None:intergenic | 45.0% | |
| TGTCAATTGGGAGGGAGATA+AGG | + | chr3_3:49971220-49971239 | None:intergenic | 45.0% | |
| TTATCTCCCTCCCAATTGAC+AGG | - | chr3_3:49971219-49971238 | Msa0456390:intron | 45.0% | |
| TGCTGAACTGCCTGTCAATT+GGG | + | chr3_3:49971232-49971251 | None:intergenic | 45.0% | |
| TTGTAAGGACCAAAGAAGCG+TGG | - | chr3_3:49971370-49971389 | Msa0456390:intron | 45.0% | |
| GCAACGAATTCATCAGAAGC+TGG | + | chr3_3:49971398-49971417 | Msa0456400:CDS | 45.0% | |
| CACCACAGATTGTTGCCTAT+GGG | - | chr3_3:49971417-49971436 | Msa0456390:intron | 45.0% | |
| ACCACAGATTGTTGCCTATG+GGG | - | chr3_3:49971418-49971437 | Msa0456390:intron | 45.0% | |
| GGATATTCAGTTTGCAGTCG+GGG | + | chr3_3:49971467-49971486 | Msa0456400:CDS | 45.0% | |
| TGGGATAAAACCTCTGACGT+TGG | + | chr3_3:49971629-49971648 | Msa0456400:CDS | 45.0% | |
| !! | CCTCCTTTGAGGTTGTGTAT+GGG | + | chr3_3:49971648-49971667 | None:intergenic | 45.0% |
| !! | ACCTCCTTTGAGGTTGTGTA+TGG | + | chr3_3:49971649-49971668 | None:intergenic | 45.0% |
| CATCCCGTAGACATGAAAAG+TGG | - | chr3_3:49971670-49971689 | Msa0456390:intron | 45.0% | |
| ACATACCACAATTCACCCCA+TGG | - | chr3_3:49971699-49971718 | Msa0456390:intron | 45.0% | |
| TGGGTTCATTGGATTCCATG+GGG | + | chr3_3:49971717-49971736 | None:intergenic | 45.0% | |
| CATGGGTTCATTGGATTCCA+TGG | + | chr3_3:49971719-49971738 | None:intergenic | 45.0% | |
| AGCCAAAGTCATGGGTTCAT+TGG | + | chr3_3:49971728-49971747 | None:intergenic | 45.0% | |
| GTTGGAACAGCCAAAGTCAT+GGG | + | chr3_3:49971736-49971755 | None:intergenic | 45.0% | |
| TGTTGGAACAGCCAAAGTCA+TGG | + | chr3_3:49971737-49971756 | None:intergenic | 45.0% | |
| !! | CTGTGAAAGGGTGCTTAAGA+GGG | - | chr3_3:49971967-49971986 | Msa0456390:intron | 45.0% |
| ! | AGGGTGCTTAAGAGGGATAA+AGG | - | chr3_3:49971974-49971993 | Msa0456390:intron | 45.0% |
| GGGTGCTTAAGAGGGATAAA+GGG | - | chr3_3:49971975-49971994 | Msa0456390:intron | 45.0% | |
| GGTGCTTAAGAGGGATAAAG+GGG | - | chr3_3:49971976-49971995 | Msa0456390:intron | 45.0% | |
| TGATGCCATTCTTGTAGTGG+TGG | + | chr3_3:49972021-49972040 | Msa0456410:CDS | 45.0% | |
| TCCTATGGACTTCATTACCG+GGG | + | chr3_3:49972064-49972083 | Msa0456410:intron | 45.0% | |
| ACTCCACACCAACTGGAATA+GGG | - | chr3_3:49972089-49972108 | Msa0456390:intron | 45.0% | |
| AGTGGCTGAAGCAAACCATT+TGG | - | chr3_3:49972112-49972131 | Msa0456390:intron | 45.0% | |
| TATGCAGCTACGACTCCAAA+TGG | + | chr3_3:49972130-49972149 | Msa0456410:intron | 45.0% | |
| !! | TCTTTTCTAAAAGGGCAGGC+CGG | + | chr3_3:49972311-49972330 | Msa0456410:intron | 45.0% |
| !!! | CCAAGTTTTGAGCTGAAAGG+AGG | + | chr3_3:49972337-49972356 | Msa0456410:intron | 45.0% |
| CCTCCTTTCAGCTCAAAACT+TGG | - | chr3_3:49972334-49972353 | Msa0456390:intron | 45.0% | |
| !!! | AGGCCAAGTTTTGAGCTGAA+AGG | + | chr3_3:49972340-49972359 | Msa0456410:intron | 45.0% |
| ! | CTCCTGAATGGTGTCAATGA+TGG | - | chr3_3:49972372-49972391 | Msa0456390:intron | 45.0% |
| CTCCTTACCTTGTTGCCAAA+TGG | - | chr3_3:49972432-49972451 | Msa0456390:intron | 45.0% | |
| TCCCATTTGGCAACAAGGTA+AGG | + | chr3_3:49972437-49972456 | Msa0456410:intron | 45.0% | |
| GGTTAAGGCTGAGAACAAAG+TGG | + | chr3_3:49972515-49972534 | Msa0456410:CDS | 45.0% | |
| AGCCATCCACTCTTGTTGAT+TGG | - | chr3_3:49972570-49972589 | Msa0456390:intron | 45.0% | |
| CTCCAATCAACAAGAGTGGA+TGG | + | chr3_3:49972575-49972594 | Msa0456410:CDS | 45.0% | |
| ! | CATCCACTCTTGTTGATTGG+AGG | - | chr3_3:49972573-49972592 | Msa0456390:intron | 45.0% |
| GTCTCTGTCTAGGAAGTTTG+TGG | + | chr3_3:49972647-49972666 | None:intergenic | 45.0% | |
| ATTCGTACTCGTCTCTGTCT+AGG | + | chr3_3:49970524-49970543 | None:intergenic | 45.0% | |
| TCACAACTCACTCTCACCTT+CGG | - | chr3_3:49972775-49972794 | Msa0456390:intron | 45.0% | |
| GTGAGGGGAAAAGAAGTTTC+AGG | + | chr3_3:49972963-49972982 | None:intergenic | 45.0% | |
| ! | CTAATAAGAGGGTGTGTGAG+GGG | + | chr3_3:49972978-49972997 | None:intergenic | 45.0% |
| ! | CCTAATAAGAGGGTGTGTGA+GGG | + | chr3_3:49972979-49972998 | None:intergenic | 45.0% |
| CCTCACACACCCTCTTATTA+GGG | - | chr3_3:49972977-49972996 | Msa0456390:intron | 45.0% | |
| CTCACACACCCTCTTATTAG+GGG | - | chr3_3:49972978-49972997 | Msa0456390:intron | 45.0% | |
| TCTCAATAAGGAGAGTCCCA+AGG | + | chr3_3:49973087-49973106 | None:intergenic | 45.0% | |
| CCCAGTAGAGAGAGATATGT+TGG | + | chr3_3:49973114-49973133 | None:intergenic | 45.0% | |
| ATATCTCTCTCTACTGGGTC+AGG | - | chr3_3:49973116-49973135 | Msa0456390:intron | 45.0% | |
| TGCTGTGATAGGATCTGGTA+TGG | + | chr3_3:49973143-49973162 | None:intergenic | 45.0% | |
| TGTACAGCCTTGCAGTTTAG+TGG | - | chr3_3:49973321-49973340 | Msa0456390:intron | 45.0% | |
| AACCATGCCACTAAACTGCA+AGG | + | chr3_3:49973331-49973350 | None:intergenic | 45.0% | |
| GAGATTGCTTGGAACATGAC+TGG | - | chr3_3:49973507-49973526 | Msa0456390:five_prime_UTR | 45.0% | |
| GTATCAAGAGGTCGAAGAGA+TGG | + | chr3_3:49973708-49973727 | None:intergenic | 45.0% | |
| TCGACCTCTTGATACTCTCA+TGG | - | chr3_3:49973713-49973732 | Msa0456390:intron | 45.0% | |
| !! | TGAGCCATGAGAGTATCAAG+AGG | + | chr3_3:49973720-49973739 | None:intergenic | 45.0% |
| TACTCTCATGGCTCATACAG+CGG | - | chr3_3:49973725-49973744 | Msa0456390:intron | 45.0% | |
| TGCATTGCAATTGACCCAAC+AGG | - | chr3_3:49973756-49973775 | Msa0456390:five_prime_UTR | 45.0% | |
| TTGCAATTGACCCAACAGGA+AGG | - | chr3_3:49973760-49973779 | Msa0456390:five_prime_UTR | 45.0% | |
| CAAGTGCAATTTGCAAGACC+AGG | + | chr3_3:49973809-49973828 | None:intergenic | 45.0% | |
| TGCACTTGAATCAGCAAGCA+AGG | - | chr3_3:49973821-49973840 | Msa0456390:five_prime_UTR | 45.0% | |
| TGAGACAGACATTTCGCTGT+TGG | - | chr3_3:49973928-49973947 | Msa0456390:intron | 45.0% | |
| TGATTCCCTTGTCAGCTTGT+GGG | - | chr3_3:49973957-49973976 | Msa0456390:intron | 45.0% | |
| AAGCAATCAAGTCCCCAGTA+TGG | + | chr3_3:49974161-49974180 | None:intergenic | 45.0% | |
| GACAGTCCAATGTTCATACG+GGG | - | chr3_3:49974669-49974688 | Msa0456390:intron | 45.0% | |
| ! | CTGCCATGAATAGTGTTGAG+TGG | - | chr3_3:49974720-49974739 | Msa0456390:intron | 45.0% |
| AACAAGTATCAGGCTGACGA+AGG | - | chr3_3:49974785-49974804 | Msa0456390:intron | 45.0% | |
| ! | GGACACATGCAAAGTGCTAT+TGG | - | chr3_3:49974819-49974838 | Msa0456390:intron | 45.0% |
| GGCATACAAACCATTTGCCT+TGG | - | chr3_3:49974934-49974953 | Msa0456390:five_prime_UTR | 45.0% | |
| ! | CGATGGATGGATTCGAAGCT+AGG | + | chr3_3:49967641-49967660 | None:intergenic | 50.0% |
| GTGTCTCAAGAAAGCCATGG+AGG | - | chr3_3:49967680-49967699 | Msa0456390:three_prime_UTR | 50.0% | |
| AAGTAATACTCCCTCCGTCC+CGG | - | chr3_3:49968340-49968359 | Msa0456390:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr3_3:49968357-49968376 | None:intergenic | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | - | chr3_3:49968553-49968572 | Msa0456390:intron | 50.0% | |
| ATATACTACTCCCTCCGTCC+CGG | + | chr3_3:49968566-49968585 | None:intergenic | 50.0% | |
| ! | GAAGGGTCACACTGATAGTG+TGG | - | chr3_3:49969095-49969114 | Msa0456390:intron | 50.0% |
| ACAGCTACATGAGTCCCATC+AGG | + | chr3_3:49969443-49969462 | None:intergenic | 50.0% | |
| GATGGGACTCATGTAGCTGT+CGG | - | chr3_3:49969443-49969462 | Msa0456390:intron | 50.0% | |
| GGGTAACCAGAGCAGTTAAC+TGG | + | chr3_3:49970076-49970095 | None:intergenic | 50.0% | |
| ACTGGCATAACTAAGTGCCC+TGG | - | chr3_3:49970342-49970361 | Msa0456390:intron | 50.0% | |
| !! | CCTTATAACTGGCACTGACG+TGG | + | chr3_3:49970495-49970514 | None:intergenic | 50.0% |
| CCACGTCAGTGCCAGTTATA+AGG | - | chr3_3:49970492-49970511 | Msa0456390:intron | 50.0% | |
| ACAACTCTCACTCCCACCTT+CGG | - | chr3_3:49970644-49970663 | Msa0456390:intron | 50.0% | |
| CTGCTTTATCATGCCGAAGG+TGG | + | chr3_3:49970660-49970679 | None:intergenic | 50.0% | |
| ! | TTTCTCTCACTGGCTAACCG+AGG | - | chr3_3:49970787-49970806 | Msa0456390:intron | 50.0% |
| CCCACACACACCCTCTTATT+AGG | - | chr3_3:49970827-49970846 | Msa0456390:intron | 50.0% | |
| ! | CCCTAATAAGAGGGTGTGTG+TGG | + | chr3_3:49970831-49970850 | None:intergenic | 50.0% |
| ! | GATGGTGAGGAAGGTGTGAA+GGG | + | chr3_3:49970881-49970900 | None:intergenic | 50.0% |
| ! | AGATGGTGAGGAAGGTGTGA+AGG | + | chr3_3:49970882-49970901 | None:intergenic | 50.0% |
| ! | TGGTGGGTCTCACTAATGAG+GGG | + | chr3_3:49970945-49970964 | None:intergenic | 50.0% |
| ! | GTTGGTGGGTCTCACTAATG+AGG | + | chr3_3:49970947-49970966 | None:intergenic | 50.0% |
| !! | GGTAATGGGAGATGTGTTGG+TGG | + | chr3_3:49970962-49970981 | None:intergenic | 50.0% |
| GCTAGTGTTAATGGTGTGGG+GGG | + | chr3_3:49971031-49971050 | None:intergenic | 50.0% | |
| AAGCGTCCCTCCAACATATG+AGG | - | chr3_3:49971175-49971194 | Msa0456390:intron | 50.0% | |
| CTGAACGCCTCATATGTTGG+AGG | + | chr3_3:49971185-49971204 | None:intergenic | 50.0% | |
| ! | CTCCAACATATGAGGCGTTC+AGG | - | chr3_3:49971183-49971202 | Msa0456390:intron | 50.0% |
| CAATTGGGAGGGAGATAAGG+GGG | + | chr3_3:49971217-49971236 | None:intergenic | 50.0% | |
| GAACTGCCTGTCAATTGGGA+GGG | + | chr3_3:49971228-49971247 | None:intergenic | 50.0% | |
| TGAACTGCCTGTCAATTGGG+AGG | + | chr3_3:49971229-49971248 | None:intergenic | 50.0% | |
| CTGCTGAACTGCCTGTCAAT+TGG | + | chr3_3:49971233-49971252 | None:intergenic | 50.0% | |
| !! | GGGTGGATTTTAGATGCAGC+AGG | - | chr3_3:49971304-49971323 | Msa0456390:intron | 50.0% |
| GGATAGGTGCAGTTGCTTAC+AGG | + | chr3_3:49971339-49971358 | Msa0456400:CDS | 50.0% | |
| GCACCACAGATTGTTGCCTA+TGG | - | chr3_3:49971416-49971435 | Msa0456390:intron | 50.0% | |
| ACCCCATAGGCAACAATCTG+TGG | + | chr3_3:49971422-49971441 | Msa0456400:CDS | 50.0% | |
| TCAGTTTGCAGTCGGGGAAT+GGG | + | chr3_3:49971461-49971480 | Msa0456400:CDS | 50.0% | |
| TTCAGTTTGCAGTCGGGGAA+TGG | + | chr3_3:49971462-49971481 | Msa0456400:CDS | 50.0% | |
| TCATCTGCTCATGAGCCATC+TGG | - | chr3_3:49971512-49971531 | Msa0456390:intron | 50.0% | |
| ! | AAGAGCGTAGGGACAGAGAT+GGG | + | chr3_3:49971564-49971583 | Msa0456400:CDS | 50.0% |
| TTTGGAAGGGGAAACAAGGG+TGG | + | chr3_3:49971599-49971618 | Msa0456400:CDS | 50.0% | |
| CCCATACACAACCTCAAAGG+AGG | - | chr3_3:49971645-49971664 | Msa0456390:intron | 50.0% | |
| TACGGGATGTACCTCCTTTG+AGG | + | chr3_3:49971659-49971678 | None:intergenic | 50.0% | |
| GGATTCCATGGGGTGAATTG+TGG | + | chr3_3:49971707-49971726 | None:intergenic | 50.0% | |
| GTCTGAGGGTGATAAGCTGA+TGG | - | chr3_3:49971813-49971832 | Msa0456390:intron | 50.0% | |
| !! | AAGGAGGTGTTCAAGCTGAC+AGG | + | chr3_3:49971856-49971875 | Msa0456410:intron | 50.0% |
| !! | GCTGTGAAAGGGTGCTTAAG+AGG | - | chr3_3:49971966-49971985 | Msa0456390:intron | 50.0% |
| !! | CCATTGCTTTTAGGCAACCC+CGG | - | chr3_3:49972044-49972063 | Msa0456390:intron | 50.0% |
| ACCCCGGTAATGAAGTCCAT+AGG | - | chr3_3:49972060-49972079 | Msa0456390:intron | 50.0% | |
| GGTGTGGAGTGAGATTCCTA+TGG | + | chr3_3:49972079-49972098 | Msa0456410:intron | 50.0% | |
| GAATCTCACTCCACACCAAC+TGG | - | chr3_3:49972082-49972101 | Msa0456390:intron | 50.0% | |
| CACTCCACACCAACTGGAAT+AGG | - | chr3_3:49972088-49972107 | Msa0456390:intron | 50.0% | |
| ! | ACTCCCTATTCCAGTTGGTG+TGG | + | chr3_3:49972095-49972114 | Msa0456410:intron | 50.0% |
| ACACCAACTGGAATAGGGAG+TGG | - | chr3_3:49972094-49972113 | Msa0456390:intron | 50.0% | |
| AATGGGGGCCATACTATAGC+TGG | + | chr3_3:49972229-49972248 | Msa0456410:intron | 50.0% | |
| GCTATAGTATGGCCCCCATT+AGG | - | chr3_3:49972229-49972248 | Msa0456390:intron | 50.0% | |
| TCAATGAGAGGGGAATGAGC+CGG | - | chr3_3:49972280-49972299 | Msa0456390:intron | 50.0% | |
| !! | TGGTGTCAATGATGGATGCG+AGG | - | chr3_3:49972380-49972399 | Msa0456390:intron | 50.0% |
| !! | TCAATGATGGATGCGAGGCT+TGG | - | chr3_3:49972385-49972404 | Msa0456390:intron | 50.0% |
| GTCTCGCCAACATGAAGATG+CGG | + | chr3_3:49972482-49972501 | Msa0456410:intron | 50.0% | |
| CCACCTCCAATCAACAAGAG+TGG | + | chr3_3:49972579-49972598 | Msa0456410:CDS | 50.0% | |
| ! | CCACTCTTGTTGATTGGAGG+TGG | - | chr3_3:49972576-49972595 | Msa0456390:intron | 50.0% |
| GTGAGAGTGAGTTGTGAAGC+AGG | + | chr3_3:49972772-49972791 | None:intergenic | 50.0% | |
| TCTCTGCTCTATCATGCCGA+AGG | + | chr3_3:49972794-49972813 | None:intergenic | 50.0% | |
| CCCTCACACACCCTCTTATT+AGG | - | chr3_3:49972976-49972995 | Msa0456390:intron | 50.0% | |
| ! | CCCTAATAAGAGGGTGTGTG+AGG | + | chr3_3:49970831-49970850 | None:intergenic | 50.0% |
| !! | GAAGAAAGAGATAGCGGGGA+AGG | + | chr3_3:49973039-49973058 | None:intergenic | 50.0% |
| ATAAGGAGAGTCCCAAGGTG+TGG | + | chr3_3:49973082-49973101 | None:intergenic | 50.0% | |
| !! | GATGGTGCTGTGATAGGATC+TGG | + | chr3_3:49973148-49973167 | None:intergenic | 50.0% |
| AGCCTTGCAGTTTAGTGGCA+TGG | - | chr3_3:49973326-49973345 | Msa0456390:intron | 50.0% | |
| TGTTACCTGCTCACGTACTC+AGG | - | chr3_3:49973660-49973679 | Msa0456390:intron | 50.0% | |
| GTTACCTGCTCACGTACTCA+GGG | - | chr3_3:49973661-49973680 | Msa0456390:intron | 50.0% | |
| ACTCTCATGGCTCATACAGC+GGG | - | chr3_3:49973726-49973745 | Msa0456390:intron | 50.0% | |
| CTGATTCCCTTGTCAGCTTG+TGG | - | chr3_3:49973956-49973975 | Msa0456390:intron | 50.0% | |
| TGTTTCTCAGATGGCCTGTC+CGG | - | chr3_3:49974121-49974140 | Msa0456390:intron | 50.0% | |
| CTATTCATGGCAGCCCTACA+AGG | + | chr3_3:49974713-49974732 | None:intergenic | 50.0% | |
| GCCGTGTCTCAAGAAAGCCA+TGG | - | chr3_3:49967677-49967696 | Msa0456390:three_prime_UTR | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr3_3:49968353-49968372 | None:intergenic | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | - | chr3_3:49968552-49968571 | Msa0456390:intron | 55.0% | |
| GGGAGTGAGAGTTGTGAAGC+AGG | + | chr3_3:49970639-49970658 | None:intergenic | 55.0% | |
| TTACTGAGGAGCTGTACCGC+TGG | + | chr3_3:49970756-49970775 | None:intergenic | 55.0% | |
| TCTCACTAATGAGGGGCCCA+AGG | + | chr3_3:49970938-49970957 | None:intergenic | 55.0% | |
| TGTTAATGGTGTGGGGGGTG+CGG | + | chr3_3:49971026-49971045 | None:intergenic | 55.0% | |
| AGCAACAGTTCCTCCTCCAG+AGG | - | chr3_3:49971087-49971106 | Msa0456390:intron | 55.0% | |
| CGCCTGAACGCCTCATATGT+TGG | + | chr3_3:49971188-49971207 | None:intergenic | 55.0% | |
| AAGCTGGCACCACGCTTCTT+TGG | + | chr3_3:49971382-49971401 | Msa0456400:CDS | 55.0% | |
| AGAGCGTAGGGACAGAGATG+GGG | + | chr3_3:49971563-49971582 | Msa0456400:CDS | 55.0% | |
| ! | CAAGAGCGTAGGGACAGAGA+TGG | + | chr3_3:49971565-49971584 | Msa0456400:CDS | 55.0% |
| CCGGGGTTGCCTAAAAGCAA+TGG | + | chr3_3:49972047-49972066 | Msa0456410:intron | 55.0% | |
| CAGCCACTCCCTATTCCAGT+TGG | + | chr3_3:49972100-49972119 | Msa0456410:intron | 55.0% | |
| TGGCCCCCATTAGGAGTTGA+AGG | - | chr3_3:49972238-49972257 | Msa0456390:intron | 55.0% | |
| GGGGAATGAGCCGGTATAAC+CGG | - | chr3_3:49972289-49972308 | Msa0456390:intron | 55.0% | |
| AAAGGGCAGGCCGGTTATAC+CGG | + | chr3_3:49972302-49972321 | Msa0456410:intron | 55.0% | |
| !! | GATAGCGGGGAAGGTGTGAA+GGG | + | chr3_3:49973030-49973049 | None:intergenic | 55.0% |
| !! | AGATAGCGGGGAAGGTGTGA+AGG | + | chr3_3:49973031-49973050 | None:intergenic | 55.0% |
| ! | AGGTGTGGAGGGTGTAGACT+AGG | + | chr3_3:49973067-49973086 | None:intergenic | 55.0% |
| AGTCTACACCCTCCACACCT+TGG | - | chr3_3:49973067-49973086 | Msa0456390:intron | 55.0% | |
| GTCTACACCCTCCACACCTT+GGG | - | chr3_3:49973068-49973087 | Msa0456390:intron | 55.0% | |
| AAGGAGTTGGAACTGCAGCG+AGG | + | chr3_3:49973185-49973204 | None:intergenic | 55.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr3_3:49968354-49968373 | None:intergenic | 60.0% | |
| ! | GGAAGGTGTGAAGGGTGAGC+TGG | + | chr3_3:49970873-49970892 | None:intergenic | 60.0% |
| ! | AGGTGTGGAGGGTGTGCACT+AGG | + | chr3_3:49970918-49970937 | None:intergenic | 60.0% |
| AGTGCACACCCTCCACACCT+TGG | - | chr3_3:49970918-49970937 | Msa0456390:intron | 60.0% | |
| GTGCACACCCTCCACACCTT+GGG | - | chr3_3:49970919-49970938 | Msa0456390:intron | 60.0% | |
| CTAATGAGGGGCCCAAGGTG+TGG | + | chr3_3:49970933-49970952 | None:intergenic | 60.0% | |
| ! | GTTAATGGTGTGGGGGGTGC+GGG | + | chr3_3:49971025-49971044 | None:intergenic | 60.0% |
| TGAAGAGGATGCGCCTCTGG+AGG | + | chr3_3:49971103-49971122 | None:intergenic | 60.0% | |
| TGGAGGGACGCTTTCGATGC+AGG | + | chr3_3:49971168-49971187 | None:intergenic | 60.0% | |
| GTCCCTACGCTCTTGAGCCA+CGG | - | chr3_3:49971570-49971589 | Msa0456390:intron | 60.0% | |
| ! | AGCCGTGGCTCAAGAGCGTA+GGG | + | chr3_3:49971575-49971594 | Msa0456400:CDS | 60.0% |
| ! | GGAAGGTGTGAAGGGTGAGC+TGG | + | chr3_3:49970873-49970892 | None:intergenic | 60.0% |
| GGAGAGTCCCAAGGTGTGGA+GGG | + | chr3_3:49973078-49973097 | None:intergenic | 60.0% | |
| AGGAGAGTCCCAAGGTGTGG+AGG | + | chr3_3:49973079-49973098 | None:intergenic | 60.0% | |
| CAGTCCCTGAGTACGTGAGC+AGG | + | chr3_3:49973668-49973687 | None:intergenic | 60.0% | |
| GCTCACGTACTCAGGGACTG+TGG | - | chr3_3:49973668-49973687 | Msa0456390:intron | 60.0% | |
| TGAGGGGCCCAAGGTGTGGA+GGG | + | chr3_3:49970929-49970948 | None:intergenic | 65.0% | |
| ATGAGGGGCCCAAGGTGTGG+AGG | + | chr3_3:49970930-49970949 | None:intergenic | 65.0% | |
| GGGTGGGGTGGTGTGATGGT+AGG | + | chr3_3:49971005-49971024 | None:intergenic | 65.0% | |
| ! | AGAGGATGCGCCTCTGGAGG+AGG | + | chr3_3:49971100-49971119 | None:intergenic | 65.0% |
| GGCTGAAGAGGATGCGCCTC+TGG | + | chr3_3:49971106-49971125 | None:intergenic | 65.0% | |
| ! | CAGCCGTGGCTCAAGAGCGT+AGG | + | chr3_3:49971576-49971595 | Msa0456400:CDS | 65.0% |
| GGAAACAAGGGTGGCAGCCG+TGG | + | chr3_3:49971590-49971609 | Msa0456400:CDS | 65.0% | |
| GTGCGGGTGGGGTGGTGTGA+TGG | + | chr3_3:49971009-49971028 | None:intergenic | 70.0% | |
| ! | ATGGTGTGGGGGGTGCGGGT+GGG | + | chr3_3:49971021-49971040 | None:intergenic | 70.0% |
| ! | AATGGTGTGGGGGGTGCGGG+TGG | + | chr3_3:49971022-49971041 | None:intergenic | 70.0% |
| ! | TGGTGTGGGGGGTGCGGGTG+GGG | + | chr3_3:49971020-49971039 | None:intergenic | 75.0% |
| !! | TGTGGGGGGTGCGGGTGGGG+TGG | + | chr3_3:49971017-49971036 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 49967606 | 49975324 | 49967606 | ID=Msa0456390;Name=Msa0456390 |
| chr3_3 | mRNA | 49967606 | 49975324 | 49967606 | ID=Msa0456390-mRNA-1;Parent=Msa0456390;Name=Msa0456390-mRNA-1;_AED=0.19;_eAED=0.19;_QI=584|1|1|1|0.63|0.75|12|396|156 |
| chr3_3 | exon | 49967606 | 49968036 | 49967606 | ID=Msa0456390-mRNA-1:exon:9559;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49968124 | 49968256 | 49968124 | ID=Msa0456390-mRNA-1:exon:9558;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49968721 | 49968799 | 49968721 | ID=Msa0456390-mRNA-1:exon:9557;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49968908 | 49968994 | 49968908 | ID=Msa0456390-mRNA-1:exon:9556;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49969149 | 49969248 | 49969149 | ID=Msa0456390-mRNA-1:exon:9555;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49969372 | 49969429 | 49969372 | ID=Msa0456390-mRNA-1:exon:9554;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49969452 | 49969471 | 49969452 | ID=Msa0456390-mRNA-1:exon:9553;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49973172 | 49973240 | 49973172 | ID=Msa0456390-mRNA-1:exon:9552;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49973466 | 49973549 | 49973466 | ID=Msa0456390-mRNA-1:exon:9551;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49973729 | 49973869 | 49973729 | ID=Msa0456390-mRNA-1:exon:9550;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49974927 | 49975022 | 49974927 | ID=Msa0456390-mRNA-1:exon:9549;Parent=Msa0456390-mRNA-1 |
| chr3_3 | exon | 49975172 | 49975324 | 49975172 | ID=Msa0456390-mRNA-1:exon:9548;Parent=Msa0456390-mRNA-1 |
| chr3_3 | five_prime_UTR | 49975172 | 49975324 | 49975172 | ID=Msa0456390-mRNA-1:five_prime_utr;Parent=Msa0456390-mRNA-1 |
| chr3_3 | five_prime_UTR | 49974927 | 49975022 | 49974927 | ID=Msa0456390-mRNA-1:five_prime_utr;Parent=Msa0456390-mRNA-1 |
| chr3_3 | five_prime_UTR | 49973729 | 49973869 | 49973729 | ID=Msa0456390-mRNA-1:five_prime_utr;Parent=Msa0456390-mRNA-1 |
| chr3_3 | five_prime_UTR | 49973466 | 49973549 | 49973466 | ID=Msa0456390-mRNA-1:five_prime_utr;Parent=Msa0456390-mRNA-1 |
| chr3_3 | five_prime_UTR | 49973172 | 49973240 | 49973172 | ID=Msa0456390-mRNA-1:five_prime_utr;Parent=Msa0456390-mRNA-1 |
| chr3_3 | five_prime_UTR | 49969452 | 49969471 | 49969452 | ID=Msa0456390-mRNA-1:five_prime_utr;Parent=Msa0456390-mRNA-1 |
| chr3_3 | five_prime_UTR | 49969409 | 49969429 | 49969409 | ID=Msa0456390-mRNA-1:five_prime_utr;Parent=Msa0456390-mRNA-1 |
| chr3_3 | CDS | 49969372 | 49969408 | 49969372 | ID=Msa0456390-mRNA-1:cds;Parent=Msa0456390-mRNA-1 |
| chr3_3 | CDS | 49969149 | 49969248 | 49969149 | ID=Msa0456390-mRNA-1:cds;Parent=Msa0456390-mRNA-1 |
| chr3_3 | CDS | 49968908 | 49968994 | 49968908 | ID=Msa0456390-mRNA-1:cds;Parent=Msa0456390-mRNA-1 |
| chr3_3 | CDS | 49968721 | 49968799 | 49968721 | ID=Msa0456390-mRNA-1:cds;Parent=Msa0456390-mRNA-1 |
| chr3_3 | CDS | 49968124 | 49968256 | 49968124 | ID=Msa0456390-mRNA-1:cds;Parent=Msa0456390-mRNA-1 |
| chr3_3 | CDS | 49968002 | 49968036 | 49968002 | ID=Msa0456390-mRNA-1:cds;Parent=Msa0456390-mRNA-1 |
| chr3_3 | three_prime_UTR | 49967606 | 49968001 | 49967606 | ID=Msa0456390-mRNA-1:three_prime_utr;Parent=Msa0456390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
