AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0469670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469670 MtrunA17_Chr3g0124841 82.670 929 71 13 1 861 1 907 0.0 1255
Msa0469670 MtrunA17_Chr5g0448571 33.259 448 211 7 448 850 352 756 2.17e-65 233
Msa0469670 MtrunA17_Chr5g0448571 54.237 59 27 0 1 59 1 59 4.42e-13 73.2
Msa0469670 MtrunA17_Chr3g0130761 29.106 615 287 13 303 860 259 781 6.94e-61 221
Msa0469670 MtrunA17_Chr3g0143731 29.659 381 204 5 484 856 358 682 1.82e-44 171
Msa0469670 MtrunA17_Chr4g0072011 26.829 574 298 13 237 739 140 662 9.07e-40 157
Msa0469670 MtrunA17_Chr4g0052471 79.775 89 15 1 497 585 110 195 3.31e-38 141
Msa0469670 MtrunA17_Chr4g0052471 90.909 44 4 0 451 494 5 48 1.23e-19 87.8
Msa0469670 MtrunA17_Chr1g0211271 27.298 359 225 6 504 853 388 719 7.42e-36 145
Msa0469670 MtrunA17_Chr7g0250681 24.891 458 263 10 450 853 405 835 4.08e-32 134
Msa0469670 MtrunA17_Chr5g0405741 24.370 357 235 6 500 853 307 631 2.37e-30 127
Msa0469670 MtrunA17_Chr2g0298171 33.065 248 137 5 500 736 639 868 2.68e-30 129
Msa0469670 MtrunA17_Chr8g0335341 23.689 553 311 12 367 853 208 715 2.72e-29 125
Msa0469670 MtrunA17_Chr3g0118401 28.185 259 167 4 492 749 452 692 3.06e-29 125
Msa0469670 MtrunA17_Chr3g0118401 45.946 74 34 1 1 68 1 74 1.74e-11 68.2
Msa0469670 MtrunA17_Chr5g0440551 28.163 245 152 4 500 740 443 667 1.20e-27 120
Msa0469670 MtrunA17_Chr5g0440551 54.386 57 26 0 1 57 1 57 1.05e-11 68.9
Msa0469670 MtrunA17_Chr3g0139411 22.590 363 257 5 492 854 363 701 5.44e-22 101
Msa0469670 MtrunA17_Chr8g0382541 35.359 181 93 6 566 743 1 160 1.95e-20 91.3
Msa0469670 MtrunA17_Chr2g0331821 21.585 366 258 7 492 853 408 748 2.15e-19 93.6
Msa0469670 MtrunA17_Chr2g0303521 26.703 367 211 14 505 858 313 634 3.46e-18 89.4
Msa0469670 MtrunA17_Chr8g0382551 40.217 92 49 2 1 86 1 92 8.19e-12 68.6
Msa0469670 MtrunA17_Chr4g0004471 20.912 373 250 9 492 855 212 548 6.17e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469670 AT1G21740.1 46.469 977 369 28 1 856 1 944 0.0 675
Msa0469670 AT1G77500.1 45.664 957 345 21 1 861 1 878 0.0 621
Msa0469670 AT4G35240.4 31.663 938 445 25 1 853 1 827 6.60e-93 311
Msa0469670 AT4G35240.3 31.663 938 445 25 1 853 1 827 6.60e-93 311
Msa0469670 AT4G35240.2 31.663 938 445 25 1 853 1 827 1.54e-92 311
Msa0469670 AT4G35240.1 31.663 938 445 25 1 853 1 827 1.54e-92 311
Msa0469670 AT2G17110.1 35.043 351 176 4 500 850 414 712 3.92e-55 204
Msa0469670 AT2G17110.1 54.545 55 25 0 1 55 1 55 1.24e-11 68.9
Msa0469670 AT5G54480.1 28.169 355 204 5 500 853 411 715 3.81e-39 156
Msa0469670 AT3G51290.3 25.143 350 228 4 504 853 306 621 2.92e-32 134
Msa0469670 AT3G51290.2 25.706 354 229 5 500 853 302 621 4.46e-32 134
Msa0469670 AT1G02110.1 24.439 446 257 10 450 844 270 686 3.18e-30 128
Msa0469670 AT1G20530.1 28.771 358 183 9 451 763 232 562 4.53e-29 124
Msa0469670 AT3G51290.1 24.286 350 225 4 504 853 306 615 6.21e-29 124
Msa0469670 AT4G39790.1 29.536 237 151 1 500 736 386 606 1.47e-28 122
Msa0469670 AT2G27090.2 27.823 248 160 3 500 746 439 668 5.40e-28 121
Msa0469670 AT2G27090.2 45.946 74 34 1 1 68 1 74 1.61e-11 68.6
Msa0469670 AT2G27090.1 27.823 248 160 3 500 746 439 668 5.40e-28 121
Msa0469670 AT2G27090.1 45.946 74 34 1 1 68 1 74 1.61e-11 68.6
Msa0469670 AT4G30130.3 27.158 556 305 18 237 739 133 641 6.70e-28 121
Msa0469670 AT4G30130.1 27.158 556 305 18 237 739 133 641 6.70e-28 121
Msa0469670 AT3G60320.1 23.566 488 288 12 422 853 330 788 7.68e-28 121
Msa0469670 AT2G19090.1 29.323 266 143 5 492 739 486 724 3.94e-25 112
Msa0469670 AT5G25590.1 22.222 459 275 9 451 855 330 760 2.30e-21 100
Msa0469670 AT1G52320.1 21.813 353 244 8 492 839 414 739 4.34e-17 86.7
Msa0469670 AT2G34670.2 22.905 358 231 8 505 853 353 674 4.40e-17 86.7
Msa0469670 AT1G52320.2 21.813 353 244 8 492 839 437 762 7.27e-17 85.9
Msa0469670 AT1G52320.5 21.813 353 244 8 492 839 437 762 7.27e-17 85.9
Msa0469670 AT1G52320.3 21.813 353 244 8 492 839 111 436 3.11e-15 79.7
Msa0469670 AT1G52320.4 21.813 353 244 8 492 839 111 436 3.11e-15 79.7
Msa0469670 AT4G30130.4 28.792 389 219 13 237 588 133 500 1.04e-11 68.9
Msa0469670 AT4G30130.2 28.792 389 219 13 237 588 133 500 1.04e-11 68.9

Find 277 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATAGCCTGGAACTGTTTC+TGG 0.194296 3_3:-71634443 None:intergenic
AAACTCACCCCTTTCTTTCT+AGG 0.194413 3_3:-71632204 None:intergenic
CACGAGCATGACAAAGTTTC+AGG 0.222711 3_3:+71634921 Msa0469670:CDS
CCTCTTTCTTGTTCTTGTTC+AGG 0.224818 3_3:-71631403 None:intergenic
TCTCATTTGAATCTTTCTTC+TGG 0.225408 3_3:+71631301 Msa0469670:CDS
CAGCTTGCAGCATTAATTAA+TGG 0.228181 3_3:+71633748 Msa0469670:CDS
GGTTCTCCTTATGGTGGTTA+TGG 0.230280 3_3:+71631646 Msa0469670:CDS
GACTGTAGATTGGGTGTTAC+AGG 0.233168 3_3:-71635370 None:intergenic
TGATTCCAATCTTGTTGATA+TGG 0.253430 3_3:-71631508 None:intergenic
GTTGACAATAATAATTATTC+TGG 0.253727 3_3:+71631811 Msa0469670:CDS
ATTAACTCTAGCTGCAAAAT+TGG 0.254729 3_3:-71635230 None:intergenic
GAAGAGGTTGTGTTTGTTAC+TGG 0.258512 3_3:-71630782 None:intergenic
AATAATAATTATTCTGGTTA+TGG 0.263471 3_3:+71631817 Msa0469670:CDS
TCAAGACTTGCTGCATTTAG+AGG 0.270388 3_3:+71632435 Msa0469670:CDS
GGGATCTAAAAGAGGTTGTT+AGG 0.275615 3_3:+71632328 Msa0469670:CDS
CAATCTTGTTGATATGGATA+TGG 0.277701 3_3:-71631502 None:intergenic
GTGGAATAATAATACTAAAA+TGG 0.277958 3_3:-71630850 None:intergenic
CTCCCTTTCAAGTTCTATAA+TGG 0.279518 3_3:-71634529 None:intergenic
ACTATGAAACCGCACCGTTT+TGG 0.283793 3_3:-71632106 None:intergenic
TCCGTCTCATCTTCTAATTC+AGG 0.285195 3_3:-71631919 None:intergenic
GGTTATGGAAGTTATGGATT+AGG 0.292348 3_3:+71631832 Msa0469670:CDS
AAAAGTGTTGAAACTATATC+AGG 0.292364 3_3:+71633688 Msa0469670:CDS
GGAGCCGGAGCCGGCGGAGG+CGG 0.296226 3_3:-71631736 None:intergenic
CCTAATGGCTTCCTTATGTT+TGG 0.304816 3_3:-71635048 None:intergenic
TATTCTGGTTATGGAAGTTA+TGG 0.304828 3_3:+71631826 Msa0469670:CDS
GGAGTATATAGTTAGGAAAT+TGG 0.312716 3_3:-71630470 None:intergenic
TTTCTAGGAGGAGATCCTTT+AGG 0.318934 3_3:-71632189 None:intergenic
AGGAACAAAGGCGGAAAATC+AGG 0.327990 3_3:+71634829 Msa0469670:CDS
GTTCTCCTTATGGTGGTTAT+GGG 0.330786 3_3:+71631647 Msa0469670:CDS
TTTGCATTTGCATTTGCATT+TGG 0.331122 3_3:-71630412 None:intergenic
CAATGGACTGGTTCTCCTTA+TGG 0.331408 3_3:+71631637 Msa0469670:CDS
ACACCATCATCTGTTTCTTC+AGG 0.331566 3_3:-71634651 None:intergenic
TAGAGCTTTGCGCACCGAAA+TGG 0.331955 3_3:+71634887 Msa0469670:CDS
CCTTTAGGAACAACATTATC+AGG 0.332468 3_3:-71632174 None:intergenic
TTCTTGTTCTTGTTCAGGTT+CGG 0.343181 3_3:-71631398 None:intergenic
GAGAGACACGTGGCGGAATC+TGG 0.345695 3_3:+71631613 Msa0469670:CDS
TGCGCCGCCTCCGCCGGCTC+CGG 0.347174 3_3:+71631732 Msa0469670:CDS
TGTTGATATGGATATGGATA+TGG 0.347686 3_3:-71631496 None:intergenic
AGCTTGCAGCATTAATTAAT+GGG 0.348005 3_3:+71633749 Msa0469670:CDS
GTTGTTAAGGGTGGAGATTT+TGG 0.350423 3_3:+71632021 Msa0469670:CDS
GTTATGGAAGTTATGGATTA+GGG 0.351793 3_3:+71631833 Msa0469670:CDS
GAAGAAAGTGGCAGAGGAAG+TGG 0.352265 3_3:+71631981 Msa0469670:CDS
AGTTTCAGCAACTAAAGCTT+TGG 0.356209 3_3:+71635308 Msa0469670:three_prime_UTR
AGAAAAGGAAGAGGTTGTTA+AGG 0.362522 3_3:+71632008 Msa0469670:CDS
CAAGAAAGAGGATTTGAATA+TGG 0.364165 3_3:+71631415 Msa0469670:CDS
GCAGTTGCAGTTTGATTTGA+AGG 0.368463 3_3:+71632674 Msa0469670:CDS
GGAGCCGGCGGAGGCGGCGC+AGG 0.371955 3_3:-71631730 None:intergenic
TTCATTTATTTATTGATTGT+AGG 0.380009 3_3:+71635416 Msa0469670:three_prime_UTR
TACGCCTGCGCCGCCTCCGC+CGG 0.382792 3_3:+71631726 Msa0469670:CDS
AGATGGATCGTGGATCGATT+TGG 0.383055 3_3:-71630687 None:intergenic
TATGGTGGTTATGGGTATAA+TGG 0.383537 3_3:+71631655 Msa0469670:CDS
CACCACCGAGAGTTTCTACT+TGG 0.383628 3_3:+71631764 Msa0469670:CDS
CCGAACCATCTTCTTCTTAC+GGG 0.385216 3_3:+71631464 Msa0469670:CDS
CACGGGGAACTCCTCCAGTT+TGG 0.386880 3_3:-71630996 None:intergenic
TGAGATTTAGATTTAAGAAA+AGG 0.388460 3_3:-71630577 None:intergenic
GGAACTGTTTCTGGTGGCAT+TGG 0.392548 3_3:-71634434 None:intergenic
TTCAGGTTCGGATTCAGCCT+CGG 0.394618 3_3:-71631386 None:intergenic
GGAGGCGGCGCAGGCGTAGA+AGG 0.400533 3_3:-71631721 None:intergenic
CGGATTCAGCCTCGGGTGTT+CGG 0.402108 3_3:-71631378 None:intergenic
CCCGTAAGAAGAAGATGGTT+CGG 0.403321 3_3:-71631464 None:intergenic
CCCGAACCATCTTCTTCTTA+CGG 0.406997 3_3:+71631463 Msa0469670:CDS
GGTGGAGCCGGAGCCGGCGG+AGG 0.407665 3_3:-71631739 None:intergenic
CTTTCATTATCTGCAATGAT+TGG 0.408806 3_3:+71634712 Msa0469670:CDS
GGCATAGAGATTGGTGATGT+TGG 0.409760 3_3:-71630515 None:intergenic
CGAGAAGGCAATGTGAGAAC+AGG 0.414014 3_3:-71631211 None:intergenic
CATATCCATATCAACAAGAT+TGG 0.414946 3_3:+71631503 Msa0469670:CDS
TAATAGTTTACAAACTGGTT+TGG 0.416201 3_3:+71635091 Msa0469670:CDS
CCAATCCGACTTGGAGAGTA+AGG 0.417005 3_3:-71634678 None:intergenic
CTTTGTCTCCACATGGAACT+AGG 0.419464 3_3:+71632307 Msa0469670:CDS
ATGCCACCAGAAACAGTTCC+AGG 0.420200 3_3:+71634437 Msa0469670:CDS
GTTTCAGCAACTAAAGCTTT+GGG 0.420405 3_3:+71635309 Msa0469670:three_prime_UTR
TTGAAAGGGAGCTTCTGAAT+TGG 0.420884 3_3:+71634541 Msa0469670:CDS
TGTTGTTGGAGTATATAGTT+AGG 0.424558 3_3:-71630477 None:intergenic
AAGAAGTGAGGGAGAGAGAA+GGG 0.424841 3_3:+71631893 Msa0469670:CDS
GGTGAAGGTGGAGCCGGAGC+CGG 0.424911 3_3:-71631745 None:intergenic
GGAAGTTATGGATTAGGGCT+AGG 0.425449 3_3:+71631838 Msa0469670:CDS
AGATTCCGCCACGTGTCTCT+CGG 0.425616 3_3:-71631611 None:intergenic
ATGAATAGAATTTCAGAAAG+AGG 0.426192 3_3:+71634744 Msa0469670:CDS
TATGGGTATAATGGTATGAA+TGG 0.427326 3_3:+71631664 Msa0469670:CDS
GAAGAAGAAGAAAGTGGCAG+AGG 0.427934 3_3:+71631975 Msa0469670:CDS
GGTGCACACAGTTCAACAAT+TGG 0.428625 3_3:+71634562 Msa0469670:CDS
CTCTGAAGTGAAACTTTCTA+AGG 0.429224 3_3:-71635129 None:intergenic
TCTTATGTTGAAAATTTGAA+TGG 0.431188 3_3:+71634600 Msa0469670:CDS
AGAGCTTTGCGCACCGAAAT+GGG 0.431764 3_3:+71634888 Msa0469670:CDS
TTTGAGACTGCTTCTAATCA+TGG 0.432301 3_3:+71632366 Msa0469670:CDS
TCGGGTTGGTGTTCGTATTG+AGG 0.433025 3_3:-71631445 None:intergenic
GAAGGAAGTGCCATTGCAAC+AGG 0.435586 3_3:+71632062 Msa0469670:CDS
GATCTGTAAATTGTTGTTGT+TGG 0.437109 3_3:-71630491 None:intergenic
CTCAAAAGCTGCATGAGCTA+TGG 0.438860 3_3:+71634793 Msa0469670:CDS
AGCATAATGAAGGAAAGAAA+TGG 0.441070 3_3:-71630908 None:intergenic
TCGAAGTTCAATTCTGATAG+TGG 0.442059 3_3:+71634957 Msa0469670:CDS
AAGAGGTTGTGTTTGTTACT+GGG 0.442183 3_3:-71630781 None:intergenic
AAGAGGGGTGGCAGATGCTA+TGG 0.442230 3_3:+71634761 Msa0469670:CDS
TTTGCAGCTAGAGTTAATCT+TGG 0.445326 3_3:+71635235 Msa0469670:three_prime_UTR
TGTAAATTAACATGGGCTGC+GGG 0.449614 3_3:+71630969 Msa0469670:exon
GCATAGAGATTGGTGATGTT+GGG 0.455238 3_3:-71630514 None:intergenic
TTTGTGGTGTTGTTGAGAAA+TGG 0.457183 3_3:-71630932 None:intergenic
TTTGAATCTTTCTTCTGGAT+CGG 0.458184 3_3:+71631306 Msa0469670:CDS
GGATCTCCTCCTAGAAAGAA+AGG 0.460253 3_3:+71632195 Msa0469670:CDS
CTCGGTGGTGAAGGTGGAGC+CGG 0.465082 3_3:-71631751 None:intergenic
CCGTAAGAAGAAGATGGTTC+GGG 0.466321 3_3:-71631463 None:intergenic
TCAGGTTCGGATTCAGCCTC+GGG 0.466440 3_3:-71631385 None:intergenic
CCTGATAATGTTGTTCCTAA+AGG 0.466850 3_3:+71632174 Msa0469670:CDS
ATTAGAAGATGAGACGGAAC+AGG 0.466915 3_3:+71631924 Msa0469670:CDS
ACTGGTTTGCAAAGAGATGA+AGG 0.467754 3_3:+71634498 Msa0469670:CDS
GAAAAGGAAGAGGTTGTTAA+GGG 0.470149 3_3:+71632009 Msa0469670:CDS
GCTTCTAATAGTTTACAAAC+TGG 0.474058 3_3:+71635086 Msa0469670:CDS
TGATAGTGGTGTTTCGCCAC+TGG 0.474624 3_3:+71634971 Msa0469670:CDS
GAAGTTATGGATTAGGGCTA+GGG 0.477151 3_3:+71631839 Msa0469670:CDS
AGGGAAAATGGCATAGAGAT+TGG 0.481322 3_3:-71630524 None:intergenic
TGATGAGAGGGCCAAACATA+AGG 0.481807 3_3:+71635037 Msa0469670:CDS
TAGAGTTAATCTTGGTATGT+AGG 0.481953 3_3:+71635243 Msa0469670:three_prime_UTR
AAAGAAGTGAGGGAGAGAGA+AGG 0.482867 3_3:+71631892 Msa0469670:CDS
AAGCCATTATAGAACTTGAA+AGG 0.483499 3_3:+71634526 Msa0469670:CDS
CGACAAATTGTAAATTAACA+TGG 0.483870 3_3:+71630961 Msa0469670:exon
TGCATCACGGACAAGCCTAA+TGG 0.484621 3_3:-71635063 None:intergenic
GAGTGAAATCTGACCGTTGA+TGG 0.485438 3_3:-71630718 None:intergenic
TTTCTTCAGGTTCATCAAGA+AGG 0.487287 3_3:-71634638 None:intergenic
AACTCTAGCTGCAAAATTGG+TGG 0.487478 3_3:-71635227 None:intergenic
TACTAAAATGGAAGCAGCAT+GGG 0.501036 3_3:-71630838 None:intergenic
TGAATAGAATTTCAGAAAGA+GGG 0.501325 3_3:+71634745 Msa0469670:CDS
AAGGAAGAGGTTGTTAAGGG+TGG 0.503136 3_3:+71632012 Msa0469670:CDS
GGTATGAATGGAGGTAATAG+TGG 0.503648 3_3:+71631676 Msa0469670:CDS
ATTTGAATGGGTGGCTCAGA+AGG 0.504891 3_3:+71634613 Msa0469670:CDS
TCAAAAGCTGCATGAGCTAT+GGG 0.507138 3_3:+71634794 Msa0469670:CDS
AGAGGAAGTGGAGAAAGAAA+AGG 0.507961 3_3:+71631993 Msa0469670:CDS
TGCGGAGCTCCAATCCGACT+TGG 0.511426 3_3:-71634687 None:intergenic
GCTTTGGGTGTGTAAACGTC+AGG 0.511721 3_3:+71635324 Msa0469670:three_prime_UTR
GGAAAGAAATGGAAGAAAGA+TGG 0.512909 3_3:-71630897 None:intergenic
AGTGGAGAAAGAAAAGGAAG+AGG 0.513148 3_3:+71631999 Msa0469670:CDS
CCTTACTCTCCAAGTCGGAT+TGG 0.513152 3_3:+71634678 Msa0469670:CDS
GATCTCCTCCTAGAAAGAAA+GGG 0.513989 3_3:+71632196 Msa0469670:CDS
GTGCACACAGTTCAACAATT+GGG 0.515126 3_3:+71634563 Msa0469670:CDS
GAAACAGTTCCAGGCTATCA+TGG 0.515239 3_3:+71634446 Msa0469670:CDS
AGCCATTATAGAACTTGAAA+GGG 0.515704 3_3:+71634527 Msa0469670:CDS
CTTAGAAAGTTTCACTTCAG+AGG 0.516214 3_3:+71635130 Msa0469670:CDS
CCAAACATAAGGAAGCCATT+AGG 0.516949 3_3:+71635048 Msa0469670:CDS
GTGAAAATTAGTGAAGGAAA+AGG 0.518538 3_3:-71630745 None:intergenic
GATTCCGCCACGTGTCTCTC+GGG 0.519830 3_3:-71631610 None:intergenic
CACAGTTCAACAATTGGGTC+AGG 0.519909 3_3:+71634568 Msa0469670:CDS
GGATCTAAAAGAGGTTGTTA+GGG 0.519957 3_3:+71632329 Msa0469670:CDS
CTACTACTCACCTGTTGCAA+TGG 0.521870 3_3:-71632072 None:intergenic
CTCACATTGCCTTCTCGTGA+AGG 0.524220 3_3:+71631217 Msa0469670:CDS
GAAGGTGGAGCCGGAGCCGG+CGG 0.524547 3_3:-71631742 None:intergenic
GTTCAGTTCAGTGAGGGTAA+TGG 0.524819 3_3:-71630872 None:intergenic
CTTATGTTGAAAATTTGAAT+GGG 0.525221 3_3:+71634601 Msa0469670:CDS
ATGCAAGAGATTGAAAGCAT+TGG 0.527869 3_3:+71633582 Msa0469670:CDS
CCTGAACAAGAACAAGAAAG+AGG 0.528449 3_3:+71631403 Msa0469670:CDS
TTGTAAATTAACATGGGCTG+CGG 0.536115 3_3:+71630968 Msa0469670:exon
GTTACAACAGTAGAGGTTGA+TGG 0.539166 3_3:+71632255 Msa0469670:CDS
TTCGCCACTGGATGATCTAA+AGG 0.539779 3_3:+71634983 Msa0469670:CDS
TCGTGGATCGATTTGGAAGG+AGG 0.540605 3_3:-71630680 None:intergenic
GTAGAAACTCTCGGTGGTGA+AGG 0.541943 3_3:-71631760 None:intergenic
GAGAAATGGAAGCATAATGA+AGG 0.542341 3_3:-71630918 None:intergenic
CTCACCCCTTTCTTTCTAGG+AGG 0.547699 3_3:-71632201 None:intergenic
CTGCAGCCTCGTAGAGAACA+TGG 0.549697 3_3:+71635189 Msa0469670:exon
GCAGCAAGTCTTGACTGATA+AGG 0.550165 3_3:-71632426 None:intergenic
TGTACTCTGAACTCAATCCT+TGG 0.551084 3_3:+71630627 Msa0469670:five_prime_UTR
CCTCTTAAAACTCTCTGAAG+AGG 0.552545 3_3:+71635272 Msa0469670:three_prime_UTR
GGCGAGAGCGTATCGTTGAT+CGG 0.553267 3_3:-71631062 None:intergenic
GAGGATTTACCTTCACGAGA+AGG 0.553408 3_3:-71631226 None:intergenic
TTTGTCTCCACATGGAACTA+GGG 0.554562 3_3:+71632308 Msa0469670:CDS
GGCTAGGGTTAGCGTCGAGT+GGG 0.555964 3_3:+71631854 Msa0469670:CDS
ACGAGCATGACAAAGTTTCA+GGG 0.557309 3_3:+71634922 Msa0469670:CDS
TCCTGAATTAGAAGATGAGA+CGG 0.558744 3_3:+71631918 Msa0469670:CDS
GGTTGTGTTTGTTACTGGGA+GGG 0.559165 3_3:-71630777 None:intergenic
CAATCTCTCAAATTAAACAC+TGG 0.563399 3_3:+71634480 Msa0469670:CDS
TTAATTAATGCTGCAAGCTG+AGG 0.567648 3_3:-71633745 None:intergenic
GAAGAAATTGCATGATGAGA+GGG 0.568060 3_3:+71635025 Msa0469670:CDS
TCCTGATTCAAAAGAAGTGA+GGG 0.568796 3_3:+71631882 Msa0469670:CDS
GAAACTCTCGGTGGTGAAGG+TGG 0.570393 3_3:-71631757 None:intergenic
CAACAGGTGAGTAGTAGTGA+GGG 0.571312 3_3:+71632078 Msa0469670:CDS
GAAGAAGGAGTAGAACCAGT+TGG 0.571423 3_3:-71631166 None:intergenic
TTATACCCATAACCACCATA+AGG 0.575087 3_3:-71631652 None:intergenic
GGTGTGTAAACGTCAGGACA+TGG 0.578226 3_3:+71635330 Msa0469670:three_prime_UTR
AGAGGGGTGGCAGATGCTAT+GGG 0.579128 3_3:+71634762 Msa0469670:CDS
GCGGAATCTGGACAATGGAC+TGG 0.581256 3_3:+71631625 Msa0469670:CDS
TGTTAATTTACAATTTGTCG+TGG 0.581922 3_3:-71630958 None:intergenic
CGTTGATGGGTGAATAGAGA+TGG 0.582930 3_3:-71630704 None:intergenic
TTATACCCGTAAGAAGAAGA+TGG 0.583571 3_3:-71631469 None:intergenic
TAAATTAACATGGGCTGCGG+GGG 0.584717 3_3:+71630971 Msa0469670:exon
ACTCAAGATCATGATCATCA+TGG 0.585920 3_3:-71631267 None:intergenic
CGTGGATCGATTTGGAAGGA+GGG 0.587926 3_3:-71630679 None:intergenic
GTAACACCCAATCTACAGTC+AGG 0.590215 3_3:+71635373 Msa0469670:three_prime_UTR
AGAGGTTGCATTTCTTCTCG+AGG 0.590287 3_3:+71632392 Msa0469670:CDS
TGGAACTAGGGATCTAAAAG+AGG 0.591949 3_3:+71632320 Msa0469670:CDS
GGGTATAATGGTATGAATGG+AGG 0.592051 3_3:+71631667 Msa0469670:CDS
GACAAATTGTAAATTAACAT+GGG 0.594367 3_3:+71630962 Msa0469670:exon
GTCCTGATTCAAAAGAAGTG+AGG 0.595426 3_3:+71631881 Msa0469670:CDS
TGCTTCTAATCATGGAAGAG+AGG 0.596147 3_3:+71632374 Msa0469670:CDS
GTAAATTAACATGGGCTGCG+GGG 0.598567 3_3:+71630970 Msa0469670:exon
TGAAGGTACTTCGAATTCGA+AGG 0.599893 3_3:+71632044 Msa0469670:CDS
TTTCATAGTAGCGAAGGTAG+TGG 0.601039 3_3:+71632120 Msa0469670:CDS
GCAAGTCTTGACTGATAAGG+TGG 0.601503 3_3:-71632423 None:intergenic
AGAAAGTTTCACTTCAGAGG+TGG 0.603559 3_3:+71635133 Msa0469670:CDS
GGAACAAAGGCGGAAAATCA+GGG 0.603888 3_3:+71634830 Msa0469670:CDS
ATGTTGAAAATTTGAATGGG+TGG 0.604696 3_3:+71634604 Msa0469670:CDS
AAAGTGTTGAAACTATATCA+GGG 0.605560 3_3:+71633689 Msa0469670:CDS
GTATATAGTTAGGAAATTGG+TGG 0.607953 3_3:-71630467 None:intergenic
TTGCCCCTTACTCTCCAAGT+CGG 0.608240 3_3:+71634673 Msa0469670:CDS
TAAGCATAACTATTAACCCC+TGG 0.609549 3_3:-71631538 None:intergenic
TTCTCTGCAGAGAGTTACCA+CGG 0.610484 3_3:-71631014 None:intergenic
TTACAGTCTCTCAGAGACAT+CGG 0.611826 3_3:+71631103 Msa0469670:CDS
TCAGCAGATTGATAAGAATG+TGG 0.613642 3_3:+71634400 Msa0469670:intron
GTGCGGTTTCATAGTAGCGA+AGG 0.615348 3_3:+71632114 Msa0469670:CDS
GATTGGAATCAAAATCAACC+AGG 0.615492 3_3:+71631520 Msa0469670:CDS
AAATCCCAAGTAGAAACTCT+CGG 0.615723 3_3:-71631769 None:intergenic
AGGGAGGATACATAAACTGA+GGG 0.617129 3_3:+71633708 Msa0469670:CDS
AGAGGTGGTGAAAGCTCATG+AGG 0.617745 3_3:+71635148 Msa0469670:CDS
AGGTTGTGTTTGTTACTGGG+AGG 0.618221 3_3:-71630778 None:intergenic
GCCACTGGATGATCTAAAGG+TGG 0.618305 3_3:+71634986 Msa0469670:CDS
AGAAGAAATTGCATGATGAG+AGG 0.619702 3_3:+71635024 Msa0469670:CDS
ATACTAAAATGGAAGCAGCA+TGG 0.620596 3_3:-71630839 None:intergenic
AATCCGACTTGGAGAGTAAG+GGG 0.620758 3_3:-71634676 None:intergenic
CAGTTCAGTGAGGGTAATGG+TGG 0.620993 3_3:-71630869 None:intergenic
TGGATCGATTTGGAAGGAGG+GGG 0.621361 3_3:-71630677 None:intergenic
CAATCCGACTTGGAGAGTAA+GGG 0.621439 3_3:-71634677 None:intergenic
TGAGGGTGATGAAGATGCGA+CGG 0.622626 3_3:+71632233 Msa0469670:CDS
TAGTGAGGGAAGTTCCAAAA+CGG 0.622761 3_3:+71632092 Msa0469670:CDS
GGGCTAGGGTTAGCGTCGAG+TGG 0.624415 3_3:+71631853 Msa0469670:CDS
AACTATTAGAAGCTGCATCA+CGG 0.624613 3_3:-71635076 None:intergenic
GAGAAGGCAATGTGAGAACA+GGG 0.624709 3_3:-71631210 None:intergenic
GGATCGTGGATCGATTTGGA+AGG 0.627929 3_3:-71630683 None:intergenic
TTTAGATCCCTAGTTCCATG+TGG 0.631482 3_3:-71632315 None:intergenic
TGGACTGGTTCTCCTTATGG+TGG 0.633553 3_3:+71631640 Msa0469670:CDS
CATCTCTATTCACCCATCAA+CGG 0.634085 3_3:+71630705 Msa0469670:five_prime_UTR
ATCTCCTCCTAGAAAGAAAG+GGG 0.635205 3_3:+71632197 Msa0469670:CDS
ACCACCGAGAGTTTCTACTT+GGG 0.635604 3_3:+71631765 Msa0469670:CDS
GCAACAGGTGAGTAGTAGTG+AGG 0.636074 3_3:+71632077 Msa0469670:CDS
AACAAGATGAGGAACAAAGG+CGG 0.639484 3_3:+71634820 Msa0469670:CDS
TGATGAACATGATCTGAAGA+AGG 0.639709 3_3:-71631340 None:intergenic
AGTGAAATCTGACCGTTGAT+GGG 0.640019 3_3:-71630717 None:intergenic
GACGGAACAGGAAACTGTGA+AGG 0.640183 3_3:+71631936 Msa0469670:CDS
GAATAGAATTTCAGAAAGAG+GGG 0.641585 3_3:+71634746 Msa0469670:CDS
TTGAAAGCATTGGATAATCG+AGG 0.645643 3_3:+71633592 Msa0469670:CDS
CAGGGAGGATACATAAACTG+AGG 0.649011 3_3:+71633707 Msa0469670:CDS
AATTATAACAGAAAGAGCCA+AGG 0.649146 3_3:-71630644 None:intergenic
ATGGCTGTTCAGTTCAGTGA+GGG 0.649245 3_3:-71630878 None:intergenic
ACGTGGCGGAATCTGGACAA+TGG 0.649398 3_3:+71631620 Msa0469670:CDS
AAGAAGAAGATGGTTCGGGT+TGG 0.651087 3_3:-71631459 None:intergenic
CATAGAGATTGGTGATGTTG+GGG 0.651776 3_3:-71630513 None:intergenic
GAACCTGAAGAAACAGATGA+TGG 0.653790 3_3:+71634648 Msa0469670:CDS
TCTCTGCAGAGAGTTACCAC+GGG 0.655952 3_3:-71631013 None:intergenic
GTGGATCGATTTGGAAGGAG+GGG 0.658073 3_3:-71630678 None:intergenic
AGAAACAAGATGAGGAACAA+AGG 0.658720 3_3:+71634817 Msa0469670:CDS
AAACGCGTGAAAATTAGTGA+AGG 0.665024 3_3:-71630751 None:intergenic
ATTGGAATCAAAATCAACCA+GGG 0.671756 3_3:+71631521 Msa0469670:CDS
TAGAATTTCAGAAAGAGGGG+TGG 0.673438 3_3:+71634749 Msa0469670:CDS
GGAAGCAGCATGGGAAAATG+TGG 0.675096 3_3:-71630829 None:intergenic
GGAACAGGAAACTGTGAAGG+AGG 0.675573 3_3:+71631939 Msa0469670:CDS
TTGCAGATAATGAAAGCTTG+CGG 0.678429 3_3:-71634705 None:intergenic
ACATGAACACCGAACACCCG+AGG 0.679265 3_3:+71631369 Msa0469670:CDS
GAGACATCGGAGAAGCTCTG+AGG 0.681296 3_3:+71631116 Msa0469670:CDS
TTAAGCACTTTGTCTCCACA+TGG 0.682460 3_3:+71632300 Msa0469670:CDS
TAGCCTGGAACTGTTTCTGG+TGG 0.687495 3_3:-71634440 None:intergenic
TGCGACGGTTACAACAGTAG+AGG 0.688026 3_3:+71632248 Msa0469670:CDS
ACTGTTCTCAGGATGAAGAG+AGG 0.689314 3_3:+71633536 Msa0469670:intron
ATGAAGAAATCTGCACCACG+TGG 0.690953 3_3:+71631565 Msa0469670:CDS
CAGGGCAGAGTATCTCACAA+AGG 0.692112 3_3:+71634848 Msa0469670:CDS
CAAGATCATGATCATCATGG+TGG 0.695629 3_3:-71631264 None:intergenic
TTGGAATCAAAATCAACCAG+GGG 0.695794 3_3:+71631522 Msa0469670:CDS
GCTATGGGAGAAACAAGATG+AGG 0.701488 3_3:+71634809 Msa0469670:CDS
GCAGGCGTAGAAGGTCCCGC+CGG 0.701500 3_3:-71631712 None:intergenic
AGGGAAGTTCCAAAACGGTG+CGG 0.705993 3_3:+71632097 Msa0469670:CDS
TCAAGAACCCGAGAGACACG+TGG 0.707419 3_3:+71631603 Msa0469670:CDS
GGGTGAATAGAGATGGATCG+TGG 0.710207 3_3:-71630697 None:intergenic
TCCACCTTTAGATCATCCAG+TGG 0.717641 3_3:-71634987 None:intergenic
GATGGCTGTTCAGTTCAGTG+AGG 0.724026 3_3:-71630879 None:intergenic
AGAAGGCAATGTGAGAACAG+GGG 0.739205 3_3:-71631209 None:intergenic
TAAATAAGAAAGATGCGCGG+CGG 0.741921 3_3:-71631083 None:intergenic
CTCTGCAGAGAGTTACCACG+GGG 0.744877 3_3:-71631012 None:intergenic
AATCGTCCATGTTCTCTACG+AGG 0.757312 3_3:-71635195 None:intergenic
CTGTAAATAAGAAAGATGCG+CGG 0.772683 3_3:-71631086 None:intergenic
GTGTTGAAACTATATCAGGG+AGG 0.772755 3_3:+71633692 Msa0469670:CDS
CAAACTGGAGGAGTTCCCCG+TGG 0.774000 3_3:+71630997 Msa0469670:CDS
AGAACCCGAGAGACACGTGG+CGG 0.780648 3_3:+71631606 Msa0469670:CDS
TCCCAAGTAGAAACTCTCGG+TGG 0.798985 3_3:-71631766 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAGATTAAAAAAAGA+GGG - chr3_3:71630546-71630565 None:intergenic 10.0%
!! AATAATAAGATTAAAAAAAG+AGG - chr3_3:71630547-71630566 None:intergenic 10.0%
!! ATAAATTAGTAAATATTGTA+CGG + chr3_3:71633475-71633494 Msa0469670:intron 10.0%
!! TATTAATAATGAAGATTTAA+GGG - chr3_3:71634219-71634238 None:intergenic 10.0%
!! TTATTAATAATGAAGATTTA+AGG - chr3_3:71634220-71634239 None:intergenic 10.0%
!!! TTAATAATTATCATCATTTT+TGG + chr3_3:71634233-71634252 Msa0469670:intron 10.0%
!!! AATAATAATTATTCTGGTTA+TGG + chr3_3:71631817-71631836 Msa0469670:CDS 15.0%
!!! TTTGAAATTAGTTAAATGTT+AGG + chr3_3:71633187-71633206 Msa0469670:intron 15.0%
!! TGACATGATATTAAAAAAAA+TGG - chr3_3:71633848-71633867 None:intergenic 15.0%
!!! TTCATTTATTTATTGATTGT+AGG + chr3_3:71635416-71635435 Msa0469670:three_prime_UTR 15.0%
!! TGAGATTTAGATTTAAGAAA+AGG - chr3_3:71630580-71630599 None:intergenic 20.0%
!! GTGGAATAATAATACTAAAA+TGG - chr3_3:71630853-71630872 None:intergenic 20.0%
!! GACAAATTGTAAATTAACAT+GGG + chr3_3:71630962-71630981 Msa0469670:exon 20.0%
!! GTTGACAATAATAATTATTC+TGG + chr3_3:71631811-71631830 Msa0469670:CDS 20.0%
!!! TTTCCTTTTTAGTTCTTTTT+TGG + chr3_3:71632469-71632488 Msa0469670:intron 20.0%
!! AATCCAAAAAAGAACTAAAA+AGG - chr3_3:71632475-71632494 None:intergenic 20.0%
!!! TTTTAGTTCTTTTTTGGATT+TGG + chr3_3:71632475-71632494 Msa0469670:intron 20.0%
!! ATATATGTTGAACTTTATGT+GGG + chr3_3:71632733-71632752 Msa0469670:intron 20.0%
!! ATGTAAATATTACTGTTTAC+AGG + chr3_3:71632834-71632853 Msa0469670:intron 20.0%
!!! AAATTAGTTACTTTATGCAT+GGG + chr3_3:71633122-71633141 Msa0469670:intron 20.0%
!! AACAACATAAATGTATGAAA+GGG - chr3_3:71633345-71633364 None:intergenic 20.0%
!! AAACAACATAAATGTATGAA+AGG - chr3_3:71633346-71633365 None:intergenic 20.0%
!! ACAAATAAGAACAATTTGAA+AGG - chr3_3:71633503-71633522 None:intergenic 20.0%
!!! ATTATCATCATTTTTGGTTT+TGG + chr3_3:71634239-71634258 Msa0469670:intron 20.0%
!!! TTATCATCATTTTTGGTTTT+GGG + chr3_3:71634240-71634259 Msa0469670:intron 20.0%
!! TCTTATGTTGAAAATTTGAA+TGG + chr3_3:71634600-71634619 Msa0469670:CDS 20.0%
!! CTTATGTTGAAAATTTGAAT+GGG + chr3_3:71634601-71634620 Msa0469670:CDS 20.0%
! GATTAAAAAAAGAGGGAAAA+TGG - chr3_3:71630539-71630558 None:intergenic 25.0%
! TGTTAATTTACAATTTGTCG+TGG - chr3_3:71630961-71630980 None:intergenic 25.0%
! CGACAAATTGTAAATTAACA+TGG + chr3_3:71630961-71630980 Msa0469670:exon 25.0%
! AACATTAAGCAATAGGATAA+GGG + chr3_3:71632582-71632601 Msa0469670:intron 25.0%
! CATATATGTTGAACTTTATG+TGG + chr3_3:71632732-71632751 Msa0469670:intron 25.0%
! CTCTATACTATCATTTAATC+AGG + chr3_3:71632787-71632806 Msa0469670:intron 25.0%
! TTAGAAGAAAATTGTATTGG+CGG - chr3_3:71632955-71632974 None:intergenic 25.0%
! GTCTTAGAAGAAAATTGTAT+TGG - chr3_3:71632958-71632977 None:intergenic 25.0%
!!! TTCTTCTAAGACAATGAAAT+TGG + chr3_3:71632966-71632985 Msa0469670:intron 25.0%
! TTTGATATTAACTCTTTCTC+AGG - chr3_3:71633012-71633031 None:intergenic 25.0%
! AATGTAGATGAAAGGTTTAT+CGG - chr3_3:71633036-71633055 None:intergenic 25.0%
! ATGGGAAAAGAAATTATACA+AGG + chr3_3:71633071-71633090 Msa0469670:intron 25.0%
! GAAATTATACAAGGAAGTTA+AGG + chr3_3:71633080-71633099 Msa0469670:intron 25.0%
!! GAAATTAGTTACTTTATGCA+TGG + chr3_3:71633121-71633140 Msa0469670:intron 25.0%
! ATGGGAAAAGAAATTATACA+AGG + chr3_3:71633071-71633090 Msa0469670:intron 25.0%
! GAAATTATACAAGGAAGTTA+AGG + chr3_3:71633080-71633099 Msa0469670:intron 25.0%
! TTCATGAAATTAGAAAACGT+TGG + chr3_3:71633228-71633247 Msa0469670:intron 25.0%
! GTTTGAGAGATGATATAAAT+TGG + chr3_3:71633362-71633381 Msa0469670:intron 25.0%
!!! AAAAGTGTTGAAACTATATC+AGG + chr3_3:71633688-71633707 Msa0469670:CDS 25.0%
!!! AAAGTGTTGAAACTATATCA+GGG + chr3_3:71633689-71633708 Msa0469670:CDS 25.0%
! TTAATGAAACAGTTCAACTT+TGG - chr3_3:71633960-71633979 None:intergenic 25.0%
! CAAAATCAAACATTCCATTA+GGG - chr3_3:71634016-71634035 None:intergenic 25.0%
!!! AATTTGTTGTTTTTCCTACA+CGG + chr3_3:71634270-71634289 Msa0469670:intron 25.0%
! ATGAATAGAATTTCAGAAAG+AGG + chr3_3:71634744-71634763 Msa0469670:CDS 25.0%
! TGAATAGAATTTCAGAAAGA+GGG + chr3_3:71634745-71634764 Msa0469670:CDS 25.0%
! TAATAGTTTACAAACTGGTT+TGG + chr3_3:71635091-71635110 Msa0469670:CDS 25.0%
!!! CTTTCTAAGGTCTTAAAAAT+GGG - chr3_3:71635119-71635138 None:intergenic 25.0%
!!! ACTTTCTAAGGTCTTAAAAA+TGG - chr3_3:71635120-71635139 None:intergenic 25.0%
TTTGCATTTGCATTTGCATT+TGG - chr3_3:71630415-71630434 None:intergenic 30.0%
GTATATAGTTAGGAAATTGG+TGG - chr3_3:71630470-71630489 None:intergenic 30.0%
GGAGTATATAGTTAGGAAAT+TGG - chr3_3:71630473-71630492 None:intergenic 30.0%
TGTTGTTGGAGTATATAGTT+AGG - chr3_3:71630480-71630499 None:intergenic 30.0%
! GATCTGTAAATTGTTGTTGT+TGG - chr3_3:71630494-71630513 None:intergenic 30.0%
AATTATAACAGAAAGAGCCA+AGG - chr3_3:71630647-71630666 None:intergenic 30.0%
GTGAAAATTAGTGAAGGAAA+AGG - chr3_3:71630748-71630767 None:intergenic 30.0%
AGCATAATGAAGGAAAGAAA+TGG - chr3_3:71630911-71630930 None:intergenic 30.0%
TGGAAGAAAAAGATCTTGAT+CGG - chr3_3:71631149-71631168 None:intergenic 30.0%
ATTGAAGAAGAAGAAGAAGA+AGG - chr3_3:71631184-71631203 None:intergenic 30.0%
!!! GTGGTTACTACTATTTTTAG+AGG - chr3_3:71631248-71631267 None:intergenic 30.0%
TCTCATTTGAATCTTTCTTC+TGG + chr3_3:71631301-71631320 Msa0469670:CDS 30.0%
TTTGAATCTTTCTTCTGGAT+CGG + chr3_3:71631306-71631325 Msa0469670:CDS 30.0%
CAAGAAAGAGGATTTGAATA+TGG + chr3_3:71631415-71631434 Msa0469670:CDS 30.0%
TGTTGATATGGATATGGATA+TGG - chr3_3:71631499-71631518 None:intergenic 30.0%
CAATCTTGTTGATATGGATA+TGG - chr3_3:71631505-71631524 None:intergenic 30.0%
CATATCCATATCAACAAGAT+TGG + chr3_3:71631503-71631522 Msa0469670:CDS 30.0%
TGATTCCAATCTTGTTGATA+TGG - chr3_3:71631511-71631530 None:intergenic 30.0%
ATTGGAATCAAAATCAACCA+GGG + chr3_3:71631521-71631540 Msa0469670:CDS 30.0%
TATGGGTATAATGGTATGAA+TGG + chr3_3:71631664-71631683 Msa0469670:CDS 30.0%
!!! TAGTGGTTTTTTTGGTTTTC+CGG + chr3_3:71631693-71631712 Msa0469670:CDS 30.0%
! TATTCTGGTTATGGAAGTTA+TGG + chr3_3:71631826-71631845 Msa0469670:CDS 30.0%
! GTTATGGAAGTTATGGATTA+GGG + chr3_3:71631833-71631852 Msa0469670:CDS 30.0%
AGATTGTGCTAGAATAATCA+TGG + chr3_3:71632515-71632534 Msa0469670:intron 30.0%
GATTGTGCTAGAATAATCAT+GGG + chr3_3:71632516-71632535 Msa0469670:intron 30.0%
ATGACTGATGTATGTTATGT+AGG + chr3_3:71632541-71632560 Msa0469670:intron 30.0%
TGCTTACAACATTAAGCAAT+AGG + chr3_3:71632575-71632594 Msa0469670:intron 30.0%
CAACATTAAGCAATAGGATA+AGG + chr3_3:71632581-71632600 Msa0469670:intron 30.0%
ACATTAAGCAATAGGATAAG+GGG + chr3_3:71632583-71632602 Msa0469670:intron 30.0%
! TTTTCTTGAAGCACAAAACT+GGG - chr3_3:71632653-71632672 None:intergenic 30.0%
! ATTTTCTTGAAGCACAAAAC+TGG - chr3_3:71632654-71632673 None:intergenic 30.0%
GATAAACCTTTCATCTACAT+TGG + chr3_3:71633035-71633054 Msa0469670:intron 30.0%
ATTGGAGAAACTTTATGCAT+GGG + chr3_3:71633053-71633072 Msa0469670:intron 30.0%
! TTACTGTGTATCCTTCTTTT+AGG + chr3_3:71633284-71633303 Msa0469670:intron 30.0%
! TACTGTGTATCCTTCTTTTA+GGG + chr3_3:71633285-71633304 Msa0469670:intron 30.0%
ATGAAAGGGAAACTATGTAT+AGG - chr3_3:71633331-71633350 None:intergenic 30.0%
! AAAAACAATGCTGATTATGC+AGG - chr3_3:71633432-71633451 None:intergenic 30.0%
TTGTATTTAACACTGTTCTC+AGG + chr3_3:71633525-71633544 Msa0469670:intron 30.0%
!! AGCATCAATTTTAGTAGCTT+CGG - chr3_3:71633620-71633639 None:intergenic 30.0%
AGCTTGCAGCATTAATTAAT+GGG + chr3_3:71633749-71633768 Msa0469670:CDS 30.0%
AGTAGAAATTTCTCAGCTAA+GGG + chr3_3:71633822-71633841 Msa0469670:intron 30.0%
!! ACTGTCAACTAAAGCATTTT+TGG - chr3_3:71633928-71633947 None:intergenic 30.0%
TATGAATCAGAAATCCCTAA+TGG + chr3_3:71633999-71634018 Msa0469670:intron 30.0%
GCAAAATCAAACATTCCATT+AGG - chr3_3:71634017-71634036 None:intergenic 30.0%
TATCATCAATAGTGACAACA+AGG - chr3_3:71634050-71634069 None:intergenic 30.0%
! GTCACTATTGATGATAATGT+AGG + chr3_3:71634054-71634073 Msa0469670:intron 30.0%
CAATCTCTCAAATTAAACAC+TGG + chr3_3:71634480-71634499 Msa0469670:CDS 30.0%
AAGCCATTATAGAACTTGAA+AGG + chr3_3:71634526-71634545 Msa0469670:CDS 30.0%
AGCCATTATAGAACTTGAAA+GGG + chr3_3:71634527-71634546 Msa0469670:CDS 30.0%
ATGTTGAAAATTTGAATGGG+TGG + chr3_3:71634604-71634623 Msa0469670:CDS 30.0%
CTTTCATTATCTGCAATGAT+TGG + chr3_3:71634712-71634731 Msa0469670:CDS 30.0%
GAATAGAATTTCAGAAAGAG+GGG + chr3_3:71634746-71634765 Msa0469670:CDS 30.0%
GCTTCTAATAGTTTACAAAC+TGG + chr3_3:71635086-71635105 Msa0469670:CDS 30.0%
ATTAACTCTAGCTGCAAAAT+TGG - chr3_3:71635233-71635252 None:intergenic 30.0%
TAGAGTTAATCTTGGTATGT+AGG + chr3_3:71635243-71635262 Msa0469670:three_prime_UTR 30.0%
AAACGCGTGAAAATTAGTGA+AGG - chr3_3:71630754-71630773 None:intergenic 35.0%
! AAGAGGTTGTGTTTGTTACT+GGG - chr3_3:71630784-71630803 None:intergenic 35.0%
TACTAAAATGGAAGCAGCAT+GGG - chr3_3:71630841-71630860 None:intergenic 35.0%
ATACTAAAATGGAAGCAGCA+TGG - chr3_3:71630842-71630861 None:intergenic 35.0%
GGAAAGAAATGGAAGAAAGA+TGG - chr3_3:71630900-71630919 None:intergenic 35.0%
! GAGAAATGGAAGCATAATGA+AGG - chr3_3:71630921-71630940 None:intergenic 35.0%
!! TTTGTGGTGTTGTTGAGAAA+TGG - chr3_3:71630935-71630954 None:intergenic 35.0%
!!! CAATTTGTCGTGGTTTTTTG+TGG - chr3_3:71630951-71630970 None:intergenic 35.0%
! TTGTAAATTAACATGGGCTG+CGG + chr3_3:71630968-71630987 Msa0469670:exon 35.0%
CTGTAAATAAGAAAGATGCG+CGG - chr3_3:71631089-71631108 None:intergenic 35.0%
! CAAGATCTTTTTCTTCCAAC+TGG + chr3_3:71631151-71631170 Msa0469670:CDS 35.0%
ACTCAAGATCATGATCATCA+TGG - chr3_3:71631270-71631289 None:intergenic 35.0%
TGATGAACATGATCTGAAGA+AGG - chr3_3:71631343-71631362 None:intergenic 35.0%
! TTCTTGTTCTTGTTCAGGTT+CGG - chr3_3:71631401-71631420 None:intergenic 35.0%
TTATACCCGTAAGAAGAAGA+TGG - chr3_3:71631472-71631491 None:intergenic 35.0%
GATTGGAATCAAAATCAACC+AGG + chr3_3:71631520-71631539 Msa0469670:CDS 35.0%
TTGGAATCAAAATCAACCAG+GGG + chr3_3:71631522-71631541 Msa0469670:CDS 35.0%
TAAGCATAACTATTAACCCC+TGG - chr3_3:71631541-71631560 None:intergenic 35.0%
TTATACCCATAACCACCATA+AGG - chr3_3:71631655-71631674 None:intergenic 35.0%
TATGGTGGTTATGGGTATAA+TGG + chr3_3:71631655-71631674 Msa0469670:CDS 35.0%
!!! GGAGGTAATAGTGGTTTTTT+TGG + chr3_3:71631685-71631704 Msa0469670:CDS 35.0%
AAATCCCAAGTAGAAACTCT+CGG - chr3_3:71631772-71631791 None:intergenic 35.0%
GGTTATGGAAGTTATGGATT+AGG + chr3_3:71631832-71631851 Msa0469670:CDS 35.0%
TCCTGATTCAAAAGAAGTGA+GGG + chr3_3:71631882-71631901 Msa0469670:CDS 35.0%
TCCTGAATTAGAAGATGAGA+CGG + chr3_3:71631918-71631937 Msa0469670:CDS 35.0%
TGAGAAGAAGAAGAAGAAAG+TGG + chr3_3:71631969-71631988 Msa0469670:CDS 35.0%
AGAAAAGGAAGAGGTTGTTA+AGG + chr3_3:71632008-71632027 Msa0469670:CDS 35.0%
GAAAAGGAAGAGGTTGTTAA+GGG + chr3_3:71632009-71632028 Msa0469670:CDS 35.0%
! CCTTTAGGAACAACATTATC+AGG - chr3_3:71632177-71632196 None:intergenic 35.0%
! CCTGATAATGTTGTTCCTAA+AGG + chr3_3:71632174-71632193 Msa0469670:CDS 35.0%
GGATCTAAAAGAGGTTGTTA+GGG + chr3_3:71632329-71632348 Msa0469670:CDS 35.0%
! TTTGAGACTGCTTCTAATCA+TGG + chr3_3:71632366-71632385 Msa0469670:CDS 35.0%
!! TTTTGGATTTGGTTTCGTAG+TGG + chr3_3:71632486-71632505 Msa0469670:intron 35.0%
GATGTATGTTATGTAGGAGA+AGG + chr3_3:71632547-71632566 Msa0469670:intron 35.0%
! AAATTGGCAAAAGCATACTG+TGG + chr3_3:71632982-71633001 Msa0469670:intron 35.0%
! AATTGGCAAAAGCATACTGT+GGG + chr3_3:71632983-71633002 Msa0469670:intron 35.0%
GTTTCTCCAATGTAGATGAA+AGG - chr3_3:71633044-71633063 None:intergenic 35.0%
CATTGGAGAAACTTTATGCA+TGG + chr3_3:71633052-71633071 Msa0469670:intron 35.0%
TACACAGTAAATCAGCTAGA+TGG - chr3_3:71633274-71633293 None:intergenic 35.0%
! ACTGTGTATCCTTCTTTTAG+GGG + chr3_3:71633286-71633305 Msa0469670:intron 35.0%
! ATGCAAGAGATTGAAAGCAT+TGG + chr3_3:71633582-71633601 Msa0469670:CDS 35.0%
!! TTGAAAGCATTGGATAATCG+AGG + chr3_3:71633592-71633611 Msa0469670:CDS 35.0%
TTAATTAATGCTGCAAGCTG+AGG - chr3_3:71633748-71633767 None:intergenic 35.0%
CAGCTTGCAGCATTAATTAA+TGG + chr3_3:71633748-71633767 Msa0469670:CDS 35.0%
GAGTAGAAATTTCTCAGCTA+AGG + chr3_3:71633821-71633840 Msa0469670:intron 35.0%
! GCTATCCAATTCCATTTTGT+TGG + chr3_3:71633877-71633896 Msa0469670:intron 35.0%
TTGCACCAACAAAATGGAAT+TGG - chr3_3:71633885-71633904 None:intergenic 35.0%
! GCTAATTTGCACCAACAAAA+TGG - chr3_3:71633891-71633910 None:intergenic 35.0%
!! GTCAACTAAAGCATTTTTGG+AGG - chr3_3:71633925-71633944 None:intergenic 35.0%
TGAAACAGTTCAACTTTGGA+GGG - chr3_3:71633956-71633975 None:intergenic 35.0%
ATGAAACAGTTCAACTTTGG+AGG - chr3_3:71633957-71633976 None:intergenic 35.0%
GGGATTTCTGATTCATAGAT+AGG - chr3_3:71633996-71634015 None:intergenic 35.0%
CTATTCTCAGCGTCTTATAA+AGG - chr3_3:71634090-71634109 None:intergenic 35.0%
TATAAGACGCTGAGAATAGA+TGG + chr3_3:71634091-71634110 Msa0469670:intron 35.0%
TCAATCTCTCGAGCTATAAT+TGG - chr3_3:71634146-71634165 None:intergenic 35.0%
GCGTTTATCTCACATTATGT+CGG + chr3_3:71634178-71634197 Msa0469670:intron 35.0%
!!! CATCATTTTTGGTTTTGGGA+TGG + chr3_3:71634244-71634263 Msa0469670:intron 35.0%
TCAGCAGATTGATAAGAATG+TGG + chr3_3:71634400-71634419 Msa0469670:intron 35.0%
!! CTCCCTTTCAAGTTCTATAA+TGG - chr3_3:71634532-71634551 None:intergenic 35.0%
! TTTCTTCAGGTTCATCAAGA+AGG - chr3_3:71634641-71634660 None:intergenic 35.0%
TTGCAGATAATGAAAGCTTG+CGG - chr3_3:71634708-71634727 None:intergenic 35.0%
AGAAACAAGATGAGGAACAA+AGG + chr3_3:71634817-71634836 Msa0469670:CDS 35.0%
TCGAAGTTCAATTCTGATAG+TGG + chr3_3:71634957-71634976 Msa0469670:CDS 35.0%
AGAAGAAATTGCATGATGAG+AGG + chr3_3:71635024-71635043 Msa0469670:CDS 35.0%
GAAGAAATTGCATGATGAGA+GGG + chr3_3:71635025-71635044 Msa0469670:CDS 35.0%
AACTATTAGAAGCTGCATCA+CGG - chr3_3:71635079-71635098 None:intergenic 35.0%
!! CTCTGAAGTGAAACTTTCTA+AGG - chr3_3:71635132-71635151 None:intergenic 35.0%
CTTAGAAAGTTTCACTTCAG+AGG + chr3_3:71635130-71635149 Msa0469670:CDS 35.0%
TTTGCAGCTAGAGTTAATCT+TGG + chr3_3:71635235-71635254 Msa0469670:three_prime_UTR 35.0%
AGTTTCAGCAACTAAAGCTT+TGG + chr3_3:71635308-71635327 Msa0469670:three_prime_UTR 35.0%
GTTTCAGCAACTAAAGCTTT+GGG + chr3_3:71635309-71635328 Msa0469670:three_prime_UTR 35.0%
! ATTTTGCCTGACTGTAGATT+GGG - chr3_3:71635382-71635401 None:intergenic 35.0%
! AATTTTGCCTGACTGTAGAT+TGG - chr3_3:71635383-71635402 None:intergenic 35.0%
!! TGGTGGAGATTTTTCAGAGA+AGG - chr3_3:71630453-71630472 None:intergenic 40.0%
!! CATAGAGATTGGTGATGTTG+GGG - chr3_3:71630516-71630535 None:intergenic 40.0%
!! GCATAGAGATTGGTGATGTT+GGG - chr3_3:71630517-71630536 None:intergenic 40.0%
AGGGAAAATGGCATAGAGAT+TGG - chr3_3:71630527-71630546 None:intergenic 40.0%
TGTACTCTGAACTCAATCCT+TGG + chr3_3:71630627-71630646 Msa0469670:five_prime_UTR 40.0%
CATCTCTATTCACCCATCAA+CGG + chr3_3:71630705-71630724 Msa0469670:five_prime_UTR 40.0%
AGTGAAATCTGACCGTTGAT+GGG - chr3_3:71630720-71630739 None:intergenic 40.0%
! GAAGAGGTTGTGTTTGTTAC+TGG - chr3_3:71630785-71630804 None:intergenic 40.0%
! TTGCTCTGCATTTTGTGAAG+AGG - chr3_3:71630801-71630820 None:intergenic 40.0%
! TGTAAATTAACATGGGCTGC+GGG + chr3_3:71630969-71630988 Msa0469670:exon 40.0%
TAAATAAGAAAGATGCGCGG+CGG - chr3_3:71631086-71631105 None:intergenic 40.0%
TTACAGTCTCTCAGAGACAT+CGG + chr3_3:71631103-71631122 Msa0469670:CDS 40.0%
CAAGATCATGATCATCATGG+TGG - chr3_3:71631267-71631286 None:intergenic 40.0%
CCTCTTTCTTGTTCTTGTTC+AGG - chr3_3:71631406-71631425 None:intergenic 40.0%
CCTGAACAAGAACAAGAAAG+AGG + chr3_3:71631403-71631422 Msa0469670:CDS 40.0%
! TAGATCACAGATTTTCCACG+TGG - chr3_3:71631583-71631602 None:intergenic 40.0%
GTTCTCCTTATGGTGGTTAT+GGG + chr3_3:71631647-71631666 Msa0469670:CDS 40.0%
GGGTATAATGGTATGAATGG+AGG + chr3_3:71631667-71631686 Msa0469670:CDS 40.0%
GGTATGAATGGAGGTAATAG+TGG + chr3_3:71631676-71631695 Msa0469670:CDS 40.0%
!!! TGGTTTTTTTGGTTTTCCGG+CGG + chr3_3:71631696-71631715 Msa0469670:CDS 40.0%
!! GAAGTTATGGATTAGGGCTA+GGG + chr3_3:71631839-71631858 Msa0469670:CDS 40.0%
GTCCTGATTCAAAAGAAGTG+AGG + chr3_3:71631881-71631900 Msa0469670:CDS 40.0%
! TCCCTCACTTCTTTTGAATC+AGG - chr3_3:71631886-71631905 None:intergenic 40.0%
TCCGTCTCATCTTCTAATTC+AGG - chr3_3:71631922-71631941 None:intergenic 40.0%
ATTAGAAGATGAGACGGAAC+AGG + chr3_3:71631924-71631943 Msa0469670:CDS 40.0%
AGAGGAAGTGGAGAAAGAAA+AGG + chr3_3:71631993-71632012 Msa0469670:CDS 40.0%
AGTGGAGAAAGAAAAGGAAG+AGG + chr3_3:71631999-71632018 Msa0469670:CDS 40.0%
! GTTGTTAAGGGTGGAGATTT+TGG + chr3_3:71632021-71632040 Msa0469670:CDS 40.0%
!! TGAAGGTACTTCGAATTCGA+AGG + chr3_3:71632044-71632063 Msa0469670:CDS 40.0%
TAGTGAGGGAAGTTCCAAAA+CGG + chr3_3:71632092-71632111 Msa0469670:CDS 40.0%
TTTCATAGTAGCGAAGGTAG+TGG + chr3_3:71632120-71632139 Msa0469670:CDS 40.0%
! TTTCTAGGAGGAGATCCTTT+AGG - chr3_3:71632192-71632211 None:intergenic 40.0%
GATCTCCTCCTAGAAAGAAA+GGG + chr3_3:71632196-71632215 Msa0469670:CDS 40.0%
ATCTCCTCCTAGAAAGAAAG+GGG + chr3_3:71632197-71632216 Msa0469670:CDS 40.0%
AAACTCACCCCTTTCTTTCT+AGG - chr3_3:71632207-71632226 None:intergenic 40.0%
GTTACAACAGTAGAGGTTGA+TGG + chr3_3:71632255-71632274 Msa0469670:CDS 40.0%
TTAAGCACTTTGTCTCCACA+TGG + chr3_3:71632300-71632319 Msa0469670:CDS 40.0%
TTTGTCTCCACATGGAACTA+GGG + chr3_3:71632308-71632327 Msa0469670:CDS 40.0%
TTTAGATCCCTAGTTCCATG+TGG - chr3_3:71632318-71632337 None:intergenic 40.0%
TGGAACTAGGGATCTAAAAG+AGG + chr3_3:71632320-71632339 Msa0469670:CDS 40.0%
GGGATCTAAAAGAGGTTGTT+AGG + chr3_3:71632328-71632347 Msa0469670:CDS 40.0%
TGCTTCTAATCATGGAAGAG+AGG + chr3_3:71632374-71632393 Msa0469670:CDS 40.0%
!! TCAAGACTTGCTGCATTTAG+AGG + chr3_3:71632435-71632454 Msa0469670:CDS 40.0%
!! TGCTGCATTTAGAGGTATCA+AGG + chr3_3:71632443-71632462 Msa0469670:intron 40.0%
AATAGGATAAGGGGCTTGTA+GGG + chr3_3:71632592-71632611 Msa0469670:intron 40.0%
!! GCAGTTGCAGTTTGATTTGA+AGG + chr3_3:71632674-71632693 Msa0469670:CDS 40.0%
! ATTGGCAAAAGCATACTGTG+GGG + chr3_3:71632984-71633003 Msa0469670:intron 40.0%
GTGTTGAAACTATATCAGGG+AGG + chr3_3:71633692-71633711 Msa0469670:CDS 40.0%
AGGGAGGATACATAAACTGA+GGG + chr3_3:71633708-71633727 Msa0469670:CDS 40.0%
GCTGAGAAATTTCTACTCAC+AGG - chr3_3:71633819-71633838 None:intergenic 40.0%
ATCTCACATTATGTCGGAAG+TGG + chr3_3:71634184-71634203 Msa0469670:intron 40.0%
AGAAAAACACTCAACCGTGT+AGG - chr3_3:71634287-71634306 None:intergenic 40.0%
! TACACGGTTGAGTGTTTTTC+TGG + chr3_3:71634286-71634305 Msa0469670:intron 40.0%
!!! GTTGAGTGTTTTTCTGGAGT+TGG + chr3_3:71634292-71634311 Msa0469670:intron 40.0%
! TTTTACTCTCCATGATAGCC+TGG - chr3_3:71634458-71634477 None:intergenic 40.0%
!! ACTGGTTTGCAAAGAGATGA+AGG + chr3_3:71634498-71634517 Msa0469670:CDS 40.0%
TTGAAAGGGAGCTTCTGAAT+TGG + chr3_3:71634541-71634560 Msa0469670:CDS 40.0%
GTGCACACAGTTCAACAATT+GGG + chr3_3:71634563-71634582 Msa0469670:CDS 40.0%
GAACCTGAAGAAACAGATGA+TGG + chr3_3:71634648-71634667 Msa0469670:CDS 40.0%
! ACACCATCATCTGTTTCTTC+AGG - chr3_3:71634654-71634673 None:intergenic 40.0%
TAGAATTTCAGAAAGAGGGG+TGG + chr3_3:71634749-71634768 Msa0469670:CDS 40.0%
TCAAAAGCTGCATGAGCTAT+GGG + chr3_3:71634794-71634813 Msa0469670:CDS 40.0%
AACAAGATGAGGAACAAAGG+CGG + chr3_3:71634820-71634839 Msa0469670:CDS 40.0%
! TTTGTCATGCTCGTGTTTTG+AGG - chr3_3:71634916-71634935 None:intergenic 40.0%
ACGAGCATGACAAAGTTTCA+GGG + chr3_3:71634922-71634941 Msa0469670:CDS 40.0%
CCTAATGGCTTCCTTATGTT+TGG - chr3_3:71635051-71635070 None:intergenic 40.0%
CCAAACATAAGGAAGCCATT+AGG + chr3_3:71635048-71635067 Msa0469670:CDS 40.0%
AGAAAGTTTCACTTCAGAGG+TGG + chr3_3:71635133-71635152 Msa0469670:CDS 40.0%
AACTCTAGCTGCAAAATTGG+TGG - chr3_3:71635230-71635249 None:intergenic 40.0%
!!! CCTCTTCAGAGAGTTTTAAG+AGG - chr3_3:71635275-71635294 None:intergenic 40.0%
! CCTCTTAAAACTCTCTGAAG+AGG + chr3_3:71635272-71635291 Msa0469670:three_prime_UTR 40.0%
!! GGCATAGAGATTGGTGATGT+TGG - chr3_3:71630518-71630537 None:intergenic 45.0%
AGATGGATCGTGGATCGATT+TGG - chr3_3:71630690-71630709 None:intergenic 45.0%
! CGTTGATGGGTGAATAGAGA+TGG - chr3_3:71630707-71630726 None:intergenic 45.0%
GAGTGAAATCTGACCGTTGA+TGG - chr3_3:71630721-71630740 None:intergenic 45.0%
! GGTTGTGTTTGTTACTGGGA+GGG - chr3_3:71630780-71630799 None:intergenic 45.0%
! AGGTTGTGTTTGTTACTGGG+AGG - chr3_3:71630781-71630800 None:intergenic 45.0%
GTTCAGTTCAGTGAGGGTAA+TGG - chr3_3:71630875-71630894 None:intergenic 45.0%
ATGGCTGTTCAGTTCAGTGA+GGG - chr3_3:71630881-71630900 None:intergenic 45.0%
! GTAAATTAACATGGGCTGCG+GGG + chr3_3:71630970-71630989 Msa0469670:exon 45.0%
! TAAATTAACATGGGCTGCGG+GGG + chr3_3:71630971-71630990 Msa0469670:exon 45.0%
TTCTCTGCAGAGAGTTACCA+CGG - chr3_3:71631017-71631036 None:intergenic 45.0%
GAAGAAGGAGTAGAACCAGT+TGG - chr3_3:71631169-71631188 None:intergenic 45.0%
AGAAGGCAATGTGAGAACAG+GGG - chr3_3:71631212-71631231 None:intergenic 45.0%
GAGAAGGCAATGTGAGAACA+GGG - chr3_3:71631213-71631232 None:intergenic 45.0%
GAGGATTTACCTTCACGAGA+AGG - chr3_3:71631229-71631248 None:intergenic 45.0%
! AAGAAGAAGATGGTTCGGGT+TGG - chr3_3:71631462-71631481 None:intergenic 45.0%
CCGTAAGAAGAAGATGGTTC+GGG - chr3_3:71631466-71631485 None:intergenic 45.0%
CCCGAACCATCTTCTTCTTA+CGG + chr3_3:71631463-71631482 Msa0469670:CDS 45.0%
CCCGTAAGAAGAAGATGGTT+CGG - chr3_3:71631467-71631486 None:intergenic 45.0%
CCGAACCATCTTCTTCTTAC+GGG + chr3_3:71631464-71631483 Msa0469670:CDS 45.0%
ATGAAGAAATCTGCACCACG+TGG + chr3_3:71631565-71631584 Msa0469670:CDS 45.0%
!! CAATGGACTGGTTCTCCTTA+TGG + chr3_3:71631637-71631656 Msa0469670:CDS 45.0%
GGTTCTCCTTATGGTGGTTA+TGG + chr3_3:71631646-71631665 Msa0469670:CDS 45.0%
!!! GGTTTTTTTGGTTTTCCGGC+GGG + chr3_3:71631697-71631716 Msa0469670:CDS 45.0%
ACCACCGAGAGTTTCTACTT+GGG + chr3_3:71631765-71631784 Msa0469670:CDS 45.0%
!! GGAAGTTATGGATTAGGGCT+AGG + chr3_3:71631838-71631857 Msa0469670:CDS 45.0%
AAAGAAGTGAGGGAGAGAGA+AGG + chr3_3:71631892-71631911 Msa0469670:CDS 45.0%
AAGAAGTGAGGGAGAGAGAA+GGG + chr3_3:71631893-71631912 Msa0469670:CDS 45.0%
GAAGAAGAAGAAAGTGGCAG+AGG + chr3_3:71631975-71631994 Msa0469670:CDS 45.0%
AAGGAAGAGGTTGTTAAGGG+TGG + chr3_3:71632012-71632031 Msa0469670:CDS 45.0%
!! AAGGGTGGAGATTTTGGTGA+AGG + chr3_3:71632027-71632046 Msa0469670:CDS 45.0%
CTACTACTCACCTGTTGCAA+TGG - chr3_3:71632075-71632094 None:intergenic 45.0%
CAACAGGTGAGTAGTAGTGA+GGG + chr3_3:71632078-71632097 Msa0469670:CDS 45.0%
! ACTATGAAACCGCACCGTTT+TGG - chr3_3:71632109-71632128 None:intergenic 45.0%
GGATCTCCTCCTAGAAAGAA+AGG + chr3_3:71632195-71632214 Msa0469670:CDS 45.0%
!!! AGGGGTGAGTTTTGAGATTG+AGG + chr3_3:71632215-71632234 Msa0469670:CDS 45.0%
!!! GGGGTGAGTTTTGAGATTGA+GGG + chr3_3:71632216-71632235 Msa0469670:CDS 45.0%
CTTTGTCTCCACATGGAACT+AGG + chr3_3:71632307-71632326 Msa0469670:CDS 45.0%
AGAGGTTGCATTTCTTCTCG+AGG + chr3_3:71632392-71632411 Msa0469670:CDS 45.0%
GCAAGTCTTGACTGATAAGG+TGG - chr3_3:71632426-71632445 None:intergenic 45.0%
GCAGCAAGTCTTGACTGATA+AGG - chr3_3:71632429-71632448 None:intergenic 45.0%
CAATAGGATAAGGGGCTTGT+AGG + chr3_3:71632591-71632610 Msa0469670:intron 45.0%
!! ATCCTTCTTTTAGGGGACGA+AGG + chr3_3:71633293-71633312 Msa0469670:intron 45.0%
ACTGTTCTCAGGATGAAGAG+AGG + chr3_3:71633536-71633555 Msa0469670:intron 45.0%
CAGGGAGGATACATAAACTG+AGG + chr3_3:71633707-71633726 Msa0469670:CDS 45.0%
TCTCAGCGTCTTATAAAGGC+AGG - chr3_3:71634086-71634105 None:intergenic 45.0%
TAGATGGTCACGTGGTATAG+AGG + chr3_3:71634107-71634126 Msa0469670:intron 45.0%
AGATGGTCACGTGGTATAGA+GGG + chr3_3:71634108-71634127 Msa0469670:intron 45.0%
TAGCTCGAGAGATTGATGAG+AGG + chr3_3:71634150-71634169 Msa0469670:intron 45.0%
ATTATGTCGGAAGTGGCTGA+AGG + chr3_3:71634191-71634210 Msa0469670:intron 45.0%
TGATAGCCTGGAACTGTTTC+TGG - chr3_3:71634446-71634465 None:intergenic 45.0%
GAAACAGTTCCAGGCTATCA+TGG + chr3_3:71634446-71634465 Msa0469670:CDS 45.0%
GGTGCACACAGTTCAACAAT+TGG + chr3_3:71634562-71634581 Msa0469670:CDS 45.0%
CACAGTTCAACAATTGGGTC+AGG + chr3_3:71634568-71634587 Msa0469670:CDS 45.0%
ATTTGAATGGGTGGCTCAGA+AGG + chr3_3:71634613-71634632 Msa0469670:CDS 45.0%
!! AATCCGACTTGGAGAGTAAG+GGG - chr3_3:71634679-71634698 None:intergenic 45.0%
!! CAATCCGACTTGGAGAGTAA+GGG - chr3_3:71634680-71634699 None:intergenic 45.0%
CTCAAAAGCTGCATGAGCTA+TGG + chr3_3:71634793-71634812 Msa0469670:CDS 45.0%
GCTATGGGAGAAACAAGATG+AGG + chr3_3:71634809-71634828 Msa0469670:CDS 45.0%
AGGAACAAAGGCGGAAAATC+AGG + chr3_3:71634829-71634848 Msa0469670:CDS 45.0%
GGAACAAAGGCGGAAAATCA+GGG + chr3_3:71634830-71634849 Msa0469670:CDS 45.0%
!!! GTGTTTTGAGGCTCCCATTT+CGG - chr3_3:71634904-71634923 None:intergenic 45.0%
CACGAGCATGACAAAGTTTC+AGG + chr3_3:71634921-71634940 Msa0469670:CDS 45.0%
TTCGCCACTGGATGATCTAA+AGG + chr3_3:71634983-71635002 Msa0469670:CDS 45.0%
TCCACCTTTAGATCATCCAG+TGG - chr3_3:71634990-71635009 None:intergenic 45.0%
TGATGAGAGGGCCAAACATA+AGG + chr3_3:71635037-71635056 Msa0469670:CDS 45.0%
AATCGTCCATGTTCTCTACG+AGG - chr3_3:71635198-71635217 None:intergenic 45.0%
! GACTGTAGATTGGGTGTTAC+AGG - chr3_3:71635373-71635392 None:intergenic 45.0%
GTAACACCCAATCTACAGTC+AGG + chr3_3:71635373-71635392 Msa0469670:three_prime_UTR 45.0%
!! TGGATCGATTTGGAAGGAGG+GGG - chr3_3:71630680-71630699 None:intergenic 50.0%
!! GTGGATCGATTTGGAAGGAG+GGG - chr3_3:71630681-71630700 None:intergenic 50.0%
!! CGTGGATCGATTTGGAAGGA+GGG - chr3_3:71630682-71630701 None:intergenic 50.0%
!! TCGTGGATCGATTTGGAAGG+AGG - chr3_3:71630683-71630702 None:intergenic 50.0%
!! GGATCGTGGATCGATTTGGA+AGG - chr3_3:71630686-71630705 None:intergenic 50.0%
GGGTGAATAGAGATGGATCG+TGG - chr3_3:71630700-71630719 None:intergenic 50.0%
GGAAGCAGCATGGGAAAATG+TGG - chr3_3:71630832-71630851 None:intergenic 50.0%
! CAGTTCAGTGAGGGTAATGG+TGG - chr3_3:71630872-71630891 None:intergenic 50.0%
GATGGCTGTTCAGTTCAGTG+AGG - chr3_3:71630882-71630901 None:intergenic 50.0%
TCTCTGCAGAGAGTTACCAC+GGG - chr3_3:71631016-71631035 None:intergenic 50.0%
CGAGAAGGCAATGTGAGAAC+AGG - chr3_3:71631214-71631233 None:intergenic 50.0%
CTCACATTGCCTTCTCGTGA+AGG + chr3_3:71631217-71631236 Msa0469670:CDS 50.0%
! TTCAGGTTCGGATTCAGCCT+CGG - chr3_3:71631389-71631408 None:intergenic 50.0%
!! TCGGGTTGGTGTTCGTATTG+AGG - chr3_3:71631448-71631467 None:intergenic 50.0%
!! TGGACTGGTTCTCCTTATGG+TGG + chr3_3:71631640-71631659 Msa0469670:CDS 50.0%
GTAGAAACTCTCGGTGGTGA+AGG - chr3_3:71631763-71631782 None:intergenic 50.0%
CACCACCGAGAGTTTCTACT+TGG + chr3_3:71631764-71631783 Msa0469670:CDS 50.0%
TCCCAAGTAGAAACTCTCGG+TGG - chr3_3:71631769-71631788 None:intergenic 50.0%
GACGGAACAGGAAACTGTGA+AGG + chr3_3:71631936-71631955 Msa0469670:CDS 50.0%
GGAACAGGAAACTGTGAAGG+AGG + chr3_3:71631939-71631958 Msa0469670:CDS 50.0%
GAAGAAAGTGGCAGAGGAAG+TGG + chr3_3:71631981-71632000 Msa0469670:CDS 50.0%
!! GAAGGAAGTGCCATTGCAAC+AGG + chr3_3:71632062-71632081 Msa0469670:CDS 50.0%
GCAACAGGTGAGTAGTAGTG+AGG + chr3_3:71632077-71632096 Msa0469670:CDS 50.0%
AGGGAAGTTCCAAAACGGTG+CGG + chr3_3:71632097-71632116 Msa0469670:CDS 50.0%
GTGCGGTTTCATAGTAGCGA+AGG + chr3_3:71632114-71632133 Msa0469670:CDS 50.0%
CTCACCCCTTTCTTTCTAGG+AGG - chr3_3:71632204-71632223 None:intergenic 50.0%
TGAGGGTGATGAAGATGCGA+CGG + chr3_3:71632233-71632252 Msa0469670:CDS 50.0%
TGCGACGGTTACAACAGTAG+AGG + chr3_3:71632248-71632267 Msa0469670:CDS 50.0%
GGATAGGAAGGTGGCTTAGA+AGG - chr3_3:71632922-71632941 None:intergenic 50.0%
CACCTTCCTATCCTCCATCT+GGG + chr3_3:71632929-71632948 Msa0469670:intron 50.0%
! AATTGTATTGGCGGCCCAGA+TGG - chr3_3:71632946-71632965 None:intergenic 50.0%
AGCCTTCGTCCCCTAAAAGA+AGG - chr3_3:71633298-71633317 None:intergenic 50.0%
AGCGTCTTATAAAGGCAGGC+AGG - chr3_3:71634082-71634101 None:intergenic 50.0%
GCTGAGAATAGATGGTCACG+TGG + chr3_3:71634099-71634118 Msa0469670:intron 50.0%
!! GGAACTGTTTCTGGTGGCAT+TGG - chr3_3:71634437-71634456 None:intergenic 50.0%
ATGCCACCAGAAACAGTTCC+AGG + chr3_3:71634437-71634456 Msa0469670:CDS 50.0%
!! TAGCCTGGAACTGTTTCTGG+TGG - chr3_3:71634443-71634462 None:intergenic 50.0%
TTGCCCCTTACTCTCCAAGT+CGG + chr3_3:71634673-71634692 Msa0469670:CDS 50.0%
!! CCAATCCGACTTGGAGAGTA+AGG - chr3_3:71634681-71634700 None:intergenic 50.0%
CCTTACTCTCCAAGTCGGAT+TGG + chr3_3:71634678-71634697 Msa0469670:CDS 50.0%
! CAGGGCAGAGTATCTCACAA+AGG + chr3_3:71634848-71634867 Msa0469670:CDS 50.0%
!! TGATAGTGGTGTTTCGCCAC+TGG + chr3_3:71634971-71634990 Msa0469670:CDS 50.0%
GCCACTGGATGATCTAAAGG+TGG + chr3_3:71634986-71635005 Msa0469670:CDS 50.0%
TGCATCACGGACAAGCCTAA+TGG - chr3_3:71635066-71635085 None:intergenic 50.0%
AGAGGTGGTGAAAGCTCATG+AGG + chr3_3:71635148-71635167 Msa0469670:CDS 50.0%
! GCTTTGGGTGTGTAAACGTC+AGG + chr3_3:71635324-71635343 Msa0469670:three_prime_UTR 50.0%
GGTGTGTAAACGTCAGGACA+TGG + chr3_3:71635330-71635349 Msa0469670:three_prime_UTR 50.0%
CTCTGCAGAGAGTTACCACG+GGG - chr3_3:71631015-71631034 None:intergenic 55.0%
! GGCGAGAGCGTATCGTTGAT+CGG - chr3_3:71631065-71631084 None:intergenic 55.0%
GAGACATCGGAGAAGCTCTG+AGG + chr3_3:71631116-71631135 Msa0469670:CDS 55.0%
ACATGAACACCGAACACCCG+AGG + chr3_3:71631369-71631388 Msa0469670:CDS 55.0%
TCAGGTTCGGATTCAGCCTC+GGG - chr3_3:71631388-71631407 None:intergenic 55.0%
TCAAGAACCCGAGAGACACG+TGG + chr3_3:71631603-71631622 Msa0469670:CDS 55.0%
AGATTCCGCCACGTGTCTCT+CGG - chr3_3:71631614-71631633 None:intergenic 55.0%
! ACGTGGCGGAATCTGGACAA+TGG + chr3_3:71631620-71631639 Msa0469670:CDS 55.0%
GCGGAATCTGGACAATGGAC+TGG + chr3_3:71631625-71631644 Msa0469670:CDS 55.0%
GAAACTCTCGGTGGTGAAGG+TGG - chr3_3:71631760-71631779 None:intergenic 55.0%
CCAGATGGAGGATAGGAAGG+TGG - chr3_3:71632931-71632950 None:intergenic 55.0%
CCACCTTCCTATCCTCCATC+TGG + chr3_3:71632928-71632947 Msa0469670:intron 55.0%
AAGAGGGGTGGCAGATGCTA+TGG + chr3_3:71634761-71634780 Msa0469670:CDS 55.0%
AGAGGGGTGGCAGATGCTAT+GGG + chr3_3:71634762-71634781 Msa0469670:CDS 55.0%
CTGCAGCCTCGTAGAGAACA+TGG + chr3_3:71635189-71635208 Msa0469670:exon 55.0%
CACGGGGAACTCCTCCAGTT+TGG - chr3_3:71630999-71631018 None:intergenic 60.0%
CAAACTGGAGGAGTTCCCCG+TGG + chr3_3:71630997-71631016 Msa0469670:CDS 60.0%
CGGATTCAGCCTCGGGTGTT+CGG - chr3_3:71631381-71631400 None:intergenic 60.0%
AGAACCCGAGAGACACGTGG+CGG + chr3_3:71631606-71631625 Msa0469670:CDS 60.0%
GATTCCGCCACGTGTCTCTC+GGG - chr3_3:71631613-71631632 None:intergenic 60.0%
! GAGAGACACGTGGCGGAATC+TGG + chr3_3:71631613-71631632 Msa0469670:CDS 60.0%
! GGCTAGGGTTAGCGTCGAGT+GGG + chr3_3:71631854-71631873 Msa0469670:CDS 60.0%
GGCCCAGATGGAGGATAGGA+AGG - chr3_3:71632934-71632953 None:intergenic 60.0%
! TGTATTGGCGGCCCAGATGG+AGG - chr3_3:71632943-71632962 None:intergenic 60.0%
TGCGGAGCTCCAATCCGACT+TGG - chr3_3:71634690-71634709 None:intergenic 60.0%
CTCGGTGGTGAAGGTGGAGC+CGG - chr3_3:71631754-71631773 None:intergenic 65.0%
! GGGCTAGGGTTAGCGTCGAG+TGG + chr3_3:71631853-71631872 Msa0469670:CDS 65.0%
TGGCGGCCCAGATGGAGGAT+AGG - chr3_3:71632938-71632957 None:intergenic 65.0%
CTGCGGGGGCTCCAAACTGG+AGG + chr3_3:71630985-71631004 Msa0469670:CDS 70.0%
GCAGGCGTAGAAGGTCCCGC+CGG - chr3_3:71631715-71631734 None:intergenic 70.0%
GGTGAAGGTGGAGCCGGAGC+CGG - chr3_3:71631748-71631767 None:intergenic 70.0%
GGGCTGCGGGGGCTCCAAAC+TGG + chr3_3:71630982-71631001 Msa0469670:CDS 75.0%
GGAGGCGGCGCAGGCGTAGA+AGG - chr3_3:71631724-71631743 None:intergenic 75.0%
GAAGGTGGAGCCGGAGCCGG+CGG - chr3_3:71631745-71631764 None:intergenic 75.0%
! TACGCCTGCGCCGCCTCCGC+CGG + chr3_3:71631726-71631745 Msa0469670:CDS 80.0%
!!! TGCGCCGCCTCCGCCGGCTC+CGG + chr3_3:71631732-71631751 Msa0469670:CDS 85.0%
! GGAGCCGGAGCCGGCGGAGG+CGG - chr3_3:71631739-71631758 None:intergenic 85.0%
! GGTGGAGCCGGAGCCGGCGG+AGG - chr3_3:71631742-71631761 None:intergenic 85.0%
! GGAGCCGGCGGAGGCGGCGC+AGG - chr3_3:71631733-71631752 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 71630396 71635464 71630396 ID=Msa0469670;Name=Msa0469670
chr3_3 mRNA 71630396 71635464 71630396 ID=Msa0469670-mRNA-1;Parent=Msa0469670;Name=Msa0469670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=584|0|0.5|0.75|0.66|1|4|262|861
chr3_3 exon 71630396 71632456 71630396 ID=Msa0469670-mRNA-1:exon:17602;Parent=Msa0469670-mRNA-1
chr3_3 exon 71632655 71632695 71632655 ID=Msa0469670-mRNA-1:exon:17603;Parent=Msa0469670-mRNA-1
chr3_3 exon 71633547 71633818 71633547 ID=Msa0469670-mRNA-1:exon:17604;Parent=Msa0469670-mRNA-1
chr3_3 exon 71634407 71635464 71634407 ID=Msa0469670-mRNA-1:exon:17605;Parent=Msa0469670-mRNA-1
chr3_3 five_prime_UTR 71630396 71630979 71630396 ID=Msa0469670-mRNA-1:five_prime_utr;Parent=Msa0469670-mRNA-1
chr3_3 CDS 71630980 71632456 71630980 ID=Msa0469670-mRNA-1:cds;Parent=Msa0469670-mRNA-1
chr3_3 CDS 71632655 71632695 71632655 ID=Msa0469670-mRNA-1:cds;Parent=Msa0469670-mRNA-1
chr3_3 CDS 71633547 71633818 71633547 ID=Msa0469670-mRNA-1:cds;Parent=Msa0469670-mRNA-1
chr3_3 CDS 71634407 71635202 71634407 ID=Msa0469670-mRNA-1:cds;Parent=Msa0469670-mRNA-1
chr3_3 three_prime_UTR 71635203 71635464 71635203 ID=Msa0469670-mRNA-1:three_prime_utr;Parent=Msa0469670-mRNA-1
Gene Sequence

>Msa0469670

ATGGGCTGCGGGGGCTCCAAACTGGAGGAGTTCCCCGTGGTAACTCTCTGCAGAGAACGCAAAAACTTTCTCAAAAACGCTTCCGATCAACGATACGCTCTCGCCGCCGCGCATCTTTCTTATTTACAGTCTCTCAGAGACATCGGAGAAGCTCTGAGGAGATTCTCCGATCAAGATCTTTTTCTTCCAACTGGTTCTACTCCTTCTTCTTCTTCTTCTTCAATTTCTTCCCCTGTTCTCACATTGCCTTCTCGTGAAGGTAAATCCTCTAAAAATAGTAGTAACCACCATGATGATCATGATCTTGAGTACGATGATGATTCTCATTTGAATCTTTCTTCTGGATCGGAGTTGAGTTCACCTTCTTCAGATCATGTTCATCATCATCAACATGAACACCGAACACCCGAGGCTGAATCCGAACCTGAACAAGAACAAGAAAGAGGATTTGAATATGGACACGAACCTCAATACGAACACCAACCCGAACCATCTTCTTCTTACGGGTATAATTATCCATATCCATATCCATATCAACAAGATTGGAATCAAAATCAACCAGGGGTTAATAGTTATGCTTATTATATGAAGAAATCTGCACCACGTGGAAAATCTGTGATCTATCAAGAACCCGAGAGACACGTGGCGGAATCTGGACAATGGACTGGTTCTCCTTATGGTGGTTATGGGTATAATGGTATGAATGGAGGTAATAGTGGTTTTTTTGGTTTTCCGGCGGGACCTTCTACGCCTGCGCCGCCTCCGCCGGCTCCGGCTCCACCTTCACCACCGAGAGTTTCTACTTGGGATTTTCTTAACTTTTTTGAGAGTGTTGACAATAATAATTATTCTGGTTATGGAAGTTATGGATTAGGGCTAGGGTTAGCGTCGAGTGGGAGTAGTCCTGATTCAAAAGAAGTGAGGGAGAGAGAAGGGATTCCTGAATTAGAAGATGAGACGGAACAGGAAACTGTGAAGGAGGTTCGTCATGAGAAGAAGAAGAAGAAAGTGGCAGAGGAAGTGGAGAAAGAAAAGGAAGAGGTTGTTAAGGGTGGAGATTTTGGTGAAGGTACTTCGAATTCGAAGGAAGTGCCATTGCAACAGGTGAGTAGTAGTGAGGGAAGTTCCAAAACGGTGCGGTTTCATAGTAGCGAAGGTAGTGGTGATTCGATTTCTTCTAGTGAAAAATTGAGTCCTGATAATGTTGTTCCTAAAGGATCTCCTCCTAGAAAGAAAGGGGTGAGTTTTGAGATTGAGGGTGATGAAGATGCGACGGTTACAACAGTAGAGGTTGATGGTGAATCTTCTATGTTGAGTAGCTTAAGCACTTTGTCTCCACATGGAACTAGGGATCTAAAAGAGGTTGTTAGGGAAATTAGAGATGAGTTTGAGACTGCTTCTAATCATGGAAGAGAGGTTGCATTTCTTCTCGAGGTTTACAAACCACCTTATCAGTCAAGACTTGCTGCATTTAGAGTTTTGTGCTTCAAGAAAATGCAGTTGCAGTTTGATTTGAAGGATGAAGAGAGGTTAAGAGCTATTTATGAGAAGCAATGCAAGAGATTGAAAGCATTGGATAATCGAGGAGCCGAAGCTACTAAAATTGATGCTACTGAGTCATCAATACGAAAGTTGCTAACAAAGATAAACATTTGCATCAAAAGTGTTGAAACTATATCAGGGAGGATACATAAACTGAGGGATGAAGAATTAGAGCCTCAGCTTGCAGCATTAATTAATGGGTATGAAATTGCTTCACTTATTCACTACTATGTTAATATTCATCTCCTATTGATAAGAATGTGGAAATTCATGTTCCAATGCCACCAGAAACAGTTCCAGGCTATCATGGAGAGTAAAACTCAATCTCTCAAATTAAACACTGGTTTGCAAAGAGATGAAGGTTTGAAAGCCATTATAGAACTTGAAAGGGAGCTTCTGAATTGGTGCACACAGTTCAACAATTGGGTCAGGACTCAAAAATCTTATGTTGAAAATTTGAATGGGTGGCTCAGAAGGTGCCTTCTTGATGAACCTGAAGAAACAGATGATGGTGTTGCCCCTTACTCTCCAAGTCGGATTGGAGCTCCGCAAGCTTTCATTATCTGCAATGATTGGCAGCAAGCAATGAATAGAATTTCAGAAAGAGGGGTGGCAGATGCTATGGGCGAATTTGCTCAAAAGCTGCATGAGCTATGGGAGAAACAAGATGAGGAACAAAGGCGGAAAATCAGGGCAGAGTATCTCACAAAGGATTTTGAGAAACAACTTAGAGCTTTGCGCACCGAAATGGGAGCCTCAAAACACGAGCATGACAAAGTTTCAGGGAAGACTTCATTGTCGAAGTTCAATTCTGATAGTGGTGTTTCGCCACTGGATGATCTAAAGGTGGATTTAGATTCTATGAAGAAGAAATTGCATGATGAGAGGGCCAAACATAAGGAAGCCATTAGGCTTGTCCGTGATGCAGCTTCTAATAGTTTACAAACTGGTTTGGTTCCCATTTTTAAGACCTTAGAAAGTTTCACTTCAGAGGTGGTGAAAGCTCATGAGGAAGTCAGACTTCAAAATGCTGCAGCCTCGTAG
Protein sequence

>Msa0469670

MGCGGSKLEEFPVVTLCRERKNFLKNASDQRYALAAAHLSYLQSLRDIGEALRRFSDQDLFLPTGSTPSSSSSSISSPVLTLPSREGKSSKNSSNHHDDHDLEYDDDSHLNLSSGSELSSPSSDHVHHHQHEHRTPEAESEPEQEQERGFEYGHEPQYEHQPEPSSSYGYNYPYPYPYQQDWNQNQPGVNSYAYYMKKSAPRGKSVIYQEPERHVAESGQWTGSPYGGYGYNGMNGGNSGFFGFPAGPSTPAPPPPAPAPPSPPRVSTWDFLNFFESVDNNNYSGYGSYGLGLGLASSGSSPDSKEVREREGIPELEDETEQETVKEVRHEKKKKKVAEEVEKEKEEVVKGGDFGEGTSNSKEVPLQQVSSSEGSSKTVRFHSSEGSGDSISSSEKLSPDNVVPKGSPPRKKGVSFEIEGDEDATVTTVEVDGESSMLSSLSTLSPHGTRDLKEVVREIRDEFETASNHGREVAFLLEVYKPPYQSRLAAFRVLCFKKMQLQFDLKDEERLRAIYEKQCKRLKALDNRGAEATKIDATESSIRKLLTKINICIKSVETISGRIHKLRDEELEPQLAALINGYEIASLIHYYVNIHLLLIRMWKFMFQCHQKQFQAIMESKTQSLKLNTGLQRDEGLKAIIELERELLNWCTQFNNWVRTQKSYVENLNGWLRRCLLDEPEETDDGVAPYSPSRIGAPQAFIICNDWQQAMNRISERGVADAMGEFAQKLHELWEKQDEEQRRKIRAEYLTKDFEKQLRALRTEMGASKHEHDKVSGKTSLSKFNSDSGVSPLDDLKVDLDSMKKKLHDERAKHKEAIRLVRDAASNSLQTGLVPIFKTLESFTSEVVKAHEEVRLQNAAAS*