AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1029190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029190 MtrunA17_Chr7g0246221 78.486 502 107 1 1 501 1 502 0.0 804
Msa1029190 MtrunA17_Chr7g0246151 79.167 504 103 2 1 503 1 503 0.0 793
Msa1029190 MtrunA17_Chr7g0246131 79.920 503 99 2 1 501 1 503 0.0 785
Msa1029190 MtrunA17_Chr7g0246181 79.960 504 99 2 1 503 1 503 0.0 770
Msa1029190 MtrunA17_Chr7g0246121 74.802 504 119 4 1 501 1 499 0.0 727
Msa1029190 MtrunA17_Chr1g0160851 47.465 493 252 3 5 497 7 492 1.83e-172 495
Msa1029190 MtrunA17_Chr4g0039901 50.427 468 226 3 33 499 34 496 4.87e-171 491
Msa1029190 MtrunA17_Chr1g0205361 45.618 502 268 2 1 502 1 497 9.36e-167 481
Msa1029190 MtrunA17_Chr8g0356001 45.783 498 265 3 5 500 10 504 9.28e-164 473
Msa1029190 MtrunA17_Chr5g0395321 46.856 493 244 4 6 497 18 493 1.63e-162 471
Msa1029190 MtrunA17_Chr5g0395331 47.143 490 251 4 10 497 17 500 1.71e-162 470
Msa1029190 MtrunA17_Chr1g0205371 46.493 499 259 4 1 497 1 493 1.74e-159 462
Msa1029190 MtrunA17_Chr1g0164211 47.436 468 241 2 33 500 30 492 1.59e-156 454
Msa1029190 MtrunA17_Chr8g0355961 45.783 498 265 3 5 500 10 504 2.32e-154 449
Msa1029190 MtrunA17_Chr2g0314721 45.666 473 252 3 1 473 12 479 4.47e-148 433
Msa1029190 MtrunA17_Chr2g0314731 46.154 468 245 3 6 473 8 468 1.01e-146 429
Msa1029190 MtrunA17_Chr5g0395381 43.687 499 226 5 6 497 18 468 1.01e-145 426
Msa1029190 MtrunA17_Chr1g0176831 45.940 468 246 3 6 473 38 498 4.00e-145 426
Msa1029190 MtrunA17_Chr1g0200961 44.643 504 267 6 1 501 2 496 1.24e-138 409
Msa1029190 MtrunA17_Chr1g0197851 40.000 485 284 3 1 485 1 478 1.44e-132 393
Msa1029190 MtrunA17_Chr1g0197881 40.535 486 279 5 1 485 1 477 2.27e-132 392
Msa1029190 MtrunA17_Chr1g0197891 41.722 453 257 3 33 485 33 478 5.76e-130 386
Msa1029190 MtrunA17_Chr1g0197871 40.757 449 259 3 34 482 34 475 7.13e-126 376
Msa1029190 MtrunA17_Chr4g0057001 38.462 481 291 2 15 495 31 506 7.89e-121 364
Msa1029190 MtrunA17_Chr7g0265611 37.732 485 293 6 17 495 29 510 1.46e-118 358
Msa1029190 MtrunA17_Chr1g0160861 47.576 330 168 2 168 497 9 333 3.42e-114 340
Msa1029190 MtrunA17_Chr4g0056951 38.581 451 271 3 46 495 56 501 3.58e-112 342
Msa1029190 MtrunA17_Chr1g0213671 38.114 509 296 9 1 497 1 502 4.12e-108 331
Msa1029190 MtrunA17_Chr8g0344151 36.290 496 311 3 11 504 13 505 1.18e-103 320
Msa1029190 MtrunA17_Chr6g0484811 35.095 473 295 5 29 495 32 498 2.23e-102 316
Msa1029190 MtrunA17_Chr2g0310391 34.979 486 310 3 13 495 4 486 1.34e-101 313
Msa1029190 MtrunA17_Chr5g0403351 34.394 503 307 7 1 491 1 492 1.64e-101 314
Msa1029190 MtrunA17_Chr8g0344181 37.053 475 290 4 34 504 38 507 2.32e-101 314
Msa1029190 MtrunA17_Chr3g0086651 37.475 499 304 3 7 498 5 502 2.33e-101 314
Msa1029190 MtrunA17_Chr3g0094171 37.205 508 308 6 3 504 6 508 2.41e-101 314
Msa1029190 MtrunA17_Chr3g0086661 37.475 499 304 3 7 498 5 502 9.10e-101 312
Msa1029190 MtrunA17_Chr5g0403321 35.881 471 282 6 33 491 33 495 1.93e-100 311
Msa1029190 MtrunA17_Chr3g0101631 35.400 500 297 7 7 495 5 489 4.22e-100 310
Msa1029190 MtrunA17_Chr3g0086691 36.926 501 304 4 7 498 5 502 4.90e-100 310
Msa1029190 MtrunA17_Chr4g0061381 36.800 500 299 6 6 495 4 496 3.04e-99 308
Msa1029190 MtrunA17_Chr8g0382901 36.809 470 290 4 26 495 485 947 7.83e-99 318
Msa1029190 MtrunA17_Chr8g0382901 35.477 482 287 5 17 495 8 468 3.81e-94 306
Msa1029190 MtrunA17_Chr2g0310381 34.979 486 310 3 13 495 4 486 7.93e-99 306
Msa1029190 MtrunA17_Chr3g0101601 35.259 502 298 9 8 497 6 492 1.01e-98 306
Msa1029190 MtrunA17_Chr6g0484841 36.117 479 287 6 26 495 29 497 1.80e-98 306
Msa1029190 MtrunA17_Chr3g0094231 37.195 492 284 12 20 504 27 500 1.48e-97 303
Msa1029190 MtrunA17_Chr5g0405001 35.845 491 290 7 18 495 28 506 1.50e-97 304
Msa1029190 MtrunA17_Chr3g0101621 35.614 497 299 8 7 497 5 486 2.69e-97 303
Msa1029190 MtrunA17_Chr3g0116741 33.133 498 320 5 9 501 26 515 3.05e-96 301
Msa1029190 MtrunA17_Chr3g0101611 35.368 475 286 9 30 495 34 496 3.01e-95 298
Msa1029190 MtrunA17_Chr5g0403331 36.034 469 281 9 33 491 34 493 3.54e-95 297
Msa1029190 MtrunA17_Chr3g0101721 33.129 489 313 5 13 495 16 496 3.57e-95 298
Msa1029190 MtrunA17_Chr1g0174471 35.259 502 299 10 6 495 26 513 1.09e-94 297
Msa1029190 MtrunA17_Chr3g0101731 34.369 483 301 7 17 491 16 490 1.70e-94 296
Msa1029190 MtrunA17_Chr8g0344191 34.756 492 314 4 11 497 44 533 6.34e-94 295
Msa1029190 MtrunA17_Chr3g0101671 35.174 489 289 11 17 491 20 494 1.58e-93 293
Msa1029190 MtrunA17_Chr3g0116681 33.199 497 310 8 13 499 16 500 1.78e-93 293
Msa1029190 MtrunA17_Chr3g0101581 32.136 501 318 9 8 497 8 497 2.11e-93 293
Msa1029190 MtrunA17_Chr1g0174451 34.064 502 316 8 1 495 5 498 2.12e-93 293
Msa1029190 MtrunA17_Chr7g0258221 34.531 501 306 8 6 495 8 497 3.17e-93 293
Msa1029190 MtrunA17_Chr1g0162811 34.545 495 307 8 3 491 6 489 1.47e-92 291
Msa1029190 MtrunA17_Chr1g0174481 33.733 501 314 8 1 495 4 492 1.78e-92 290
Msa1029190 MtrunA17_Chr8g0390881 31.992 497 324 6 6 495 8 497 5.54e-92 289
Msa1029190 MtrunA17_Chr3g0101801 34.320 507 312 8 6 501 11 507 8.00e-92 289
Msa1029190 MtrunA17_Chr3g0101571 31.847 471 304 6 31 495 33 492 1.06e-90 286
Msa1029190 MtrunA17_Chr4g0076161 35.167 509 295 13 1 491 1 492 1.13e-90 286
Msa1029190 MtrunA17_Chr4g0020041 34.051 511 306 13 7 502 8 502 1.49e-90 285
Msa1029190 MtrunA17_Chr5g0430031 35.106 470 290 7 33 495 36 497 3.18e-90 285
Msa1029190 MtrunA17_Chr1g0162801 36.486 518 298 13 1 502 1 503 7.20e-90 284
Msa1029190 MtrunA17_Chr8g0361471 34.375 480 295 10 6 475 5 474 9.19e-90 283
Msa1029190 MtrunA17_Chr6g0466331 34.375 480 295 10 6 475 5 474 1.07e-89 283
Msa1029190 MtrunA17_Chr3g0101711 32.475 505 322 9 6 501 9 503 1.27e-89 283
Msa1029190 MtrunA17_Chr3g0101701 33.617 470 295 8 34 495 38 498 1.66e-89 283
Msa1029190 MtrunA17_Chr3g0101691 31.828 487 317 6 7 486 11 489 1.75e-89 283
Msa1029190 MtrunA17_Chr1g0174461 33.992 506 306 10 3 495 7 497 2.06e-89 283
Msa1029190 MtrunA17_Chr3g0101661 31.515 495 325 6 3 491 7 493 2.79e-89 283
Msa1029190 MtrunA17_Chr3g0101821 35.579 475 292 5 27 495 28 494 3.17e-89 282
Msa1029190 MtrunA17_Chr6g0465511 34.167 480 296 10 6 475 5 474 3.27e-89 282
Msa1029190 MtrunA17_Chr3g0101651 32.762 467 299 7 32 491 36 494 3.46e-89 282
Msa1029190 MtrunA17_Chr3g0101751 34.497 487 303 6 17 495 23 501 4.22e-89 282
Msa1029190 MtrunA17_Chr1g0167321 37.427 513 297 10 1 502 1 500 6.72e-89 281
Msa1029190 MtrunA17_Chr5g0430101 34.728 478 301 6 25 497 25 496 1.25e-88 281
Msa1029190 MtrunA17_Chr4g0047641 32.475 505 327 7 3 499 15 513 1.59e-88 281
Msa1029190 MtrunA17_Chr1g0174441 34.630 514 295 15 3 495 26 519 1.62e-88 281
Msa1029190 MtrunA17_Chr4g0058231 32.406 503 323 6 6 499 1 495 1.66e-88 280
Msa1029190 MtrunA17_Chr4g0035921 32.031 512 318 8 1 495 8 506 2.07e-88 280
Msa1029190 MtrunA17_Chr4g0047661 32.129 498 329 4 3 495 17 510 3.91e-88 280
Msa1029190 MtrunA17_Chr5g0431641 30.754 504 329 8 1 495 1 493 4.74e-88 279
Msa1029190 MtrunA17_Chr4g0011901 33.817 482 310 6 25 502 20 496 1.28e-87 278
Msa1029190 MtrunA17_Chr4g0030701 33.198 491 300 7 26 495 27 510 1.64e-87 278
Msa1029190 MtrunA17_Chr3g0101811 32.604 503 310 8 13 495 16 509 1.69e-87 278
Msa1029190 MtrunA17_Chr5g0430081 35.208 480 294 7 25 495 24 495 2.46e-87 277
Msa1029190 MtrunA17_Chr8g0372251 34.110 472 291 6 35 495 36 498 6.34e-87 276
Msa1029190 MtrunA17_Chr8g0357421 34.702 487 306 5 13 495 16 494 9.46e-87 276
Msa1029190 MtrunA17_Chr7g0218611 33.333 465 305 5 26 488 25 486 1.16e-86 275
Msa1029190 MtrunA17_Chr7g0255531 31.164 507 331 7 6 504 1 497 1.40e-86 275
Msa1029190 MtrunA17_Chr7g0235551 32.869 502 323 7 9 500 8 505 1.99e-86 275
Msa1029190 MtrunA17_Chr5g0430091 34.737 475 293 7 33 500 36 500 2.90e-86 275
Msa1029190 MtrunA17_Chr5g0430131 34.690 467 291 5 35 495 38 496 3.53e-86 274
Msa1029190 MtrunA17_Chr3g0101761 33.895 475 300 5 27 495 28 494 5.23e-86 274
Msa1029190 MtrunA17_Chr4g0058281 31.237 493 331 5 13 501 25 513 5.40e-86 274
Msa1029190 MtrunA17_Chr3g0084921 33.138 513 309 10 2 495 6 503 6.21e-86 274
Msa1029190 MtrunA17_Chr4g0011961 32.803 503 323 7 7 502 1 495 2.40e-85 271
Msa1029190 MtrunA17_Chr5g0445461 30.020 493 331 6 3 491 7 489 3.49e-85 271
Msa1029190 MtrunA17_Chr6g0463791 33.002 503 310 9 1 491 1 488 4.50e-85 271
Msa1029190 MtrunA17_Chr7g0218601 32.051 468 303 7 27 488 27 485 7.27e-85 270
Msa1029190 MtrunA17_Chr4g0047631 31.440 493 327 3 6 495 21 505 1.65e-84 270
Msa1029190 MtrunA17_Chr8g0357431 34.064 502 312 7 5 495 2 495 2.97e-84 269
Msa1029190 MtrunA17_Chr1g0156101 31.818 484 308 8 25 491 23 501 5.32e-84 269
Msa1029190 MtrunA17_Chr5g0431671 31.263 467 306 6 34 495 38 494 5.96e-84 268
Msa1029190 MtrunA17_Chr4g0047691 31.128 514 319 9 3 499 17 512 6.19e-84 269
Msa1029190 MtrunA17_Chr5g0446161 34.086 487 291 11 22 497 28 495 1.33e-83 267
Msa1029190 MtrunA17_Chr5g0445451 30.522 498 330 6 3 495 7 493 2.50e-83 266
Msa1029190 MtrunA17_Chr4g0058191 31.846 493 321 8 6 495 1 481 4.07e-83 266
Msa1029190 MtrunA17_Chr5g0446151 34.560 489 289 12 21 497 27 496 4.27e-83 266
Msa1029190 MtrunA17_Chr5g0445441 30.539 501 326 8 3 495 48 534 4.97e-83 267
Msa1029190 MtrunA17_Chr6g0463801 35.010 477 294 5 29 501 32 496 8.62e-83 265
Msa1029190 MtrunA17_Chr5g0419691 34.362 486 301 8 23 502 23 496 1.39e-82 265
Msa1029190 MtrunA17_Chr8g0362481 35.892 443 253 9 69 495 1 428 2.30e-82 262
Msa1029190 MtrunA17_Chr3g0101831 33.607 488 311 5 13 495 16 495 4.13e-82 263
Msa1029190 MtrunA17_Chr3g0101741 32.168 429 276 5 69 495 1 416 5.81e-82 261
Msa1029190 MtrunA17_Chr4g0058261 32.298 483 307 8 30 501 59 532 8.27e-82 263
Msa1029190 MtrunA17_Chr4g0011981 33.121 471 308 5 35 502 30 496 1.10e-81 262
Msa1029190 MtrunA17_Chr4g0011921 31.919 495 322 7 7 495 4 489 1.58e-80 259
Msa1029190 MtrunA17_Chr4g0011871 33.881 487 303 8 23 502 23 497 1.77e-80 259
Msa1029190 MtrunA17_Chr8g0362701 34.194 465 287 9 41 495 42 497 2.01e-80 259
Msa1029190 MtrunA17_Chr5g0445381 30.453 486 318 7 17 495 52 524 4.56e-80 259
Msa1029190 MtrunA17_Chr5g0445421 29.899 495 308 9 3 491 81 542 5.05e-79 257
Msa1029190 MtrunA17_Chr5g0401681 33.265 490 296 12 17 495 14 483 5.31e-79 255
Msa1029190 MtrunA17_Chr7g0254641 31.440 493 318 8 19 495 19 507 1.39e-78 255
Msa1029190 MtrunA17_Chr1g0207841 32.909 471 297 7 41 495 45 512 1.83e-78 254
Msa1029190 MtrunA17_Chr4g0030711 31.924 473 301 5 41 495 44 513 3.82e-78 254
Msa1029190 MtrunA17_Chr5g0445531 30.252 476 315 6 25 495 29 492 4.62e-78 253
Msa1029190 MtrunA17_Chr4g0024771 30.754 504 321 10 1 491 1 489 1.59e-77 251
Msa1029190 MtrunA17_Chr4g0053621 32.540 504 307 8 3 495 6 487 2.81e-77 251
Msa1029190 MtrunA17_Chr7g0224551 30.874 515 314 11 6 495 4 501 1.46e-76 249
Msa1029190 MtrunA17_Chr5g0431511 31.210 471 307 6 34 495 33 495 5.32e-76 248
Msa1029190 MtrunA17_Chr5g0401691 30.891 505 322 8 1 499 21 504 1.23e-75 247
Msa1029190 MtrunA17_Chr4g0058201 31.423 471 313 6 30 495 21 486 4.70e-75 245
Msa1029190 MtrunA17_Chr7g0224561 30.485 515 316 11 6 495 4 501 2.22e-74 244
Msa1029190 MtrunA17_Chr4g0039391 34.549 466 266 15 48 495 48 492 2.66e-74 243
Msa1029190 MtrunA17_Chr6g0472311 29.608 510 323 11 5 491 10 506 3.73e-74 243
Msa1029190 MtrunA17_Chr7g0258211 33.202 506 313 8 5 495 7 502 1.73e-73 241
Msa1029190 MtrunA17_Chr5g0431501 30.426 470 312 5 34 495 33 495 3.26e-73 240
Msa1029190 MtrunA17_Chr5g0431461 30.426 470 312 5 34 495 33 495 3.26e-73 240
Msa1029190 MtrunA17_Chr1g0156081 31.809 481 306 8 28 491 50 525 9.95e-73 240
Msa1029190 MtrunA17_Chr4g0052851 33.817 482 292 11 18 495 17 475 1.33e-72 238
Msa1029190 MtrunA17_Chr4g0052861 29.259 499 327 9 9 497 3 485 4.88e-72 237
Msa1029190 MtrunA17_Chr4g0052881 30.595 487 315 6 18 497 16 486 6.44e-72 237
Msa1029190 MtrunA17_Chr5g0406651 31.656 477 312 7 18 488 15 483 7.60e-72 236
Msa1029190 MtrunA17_Chr4g0046321 32.179 491 283 13 35 495 35 505 1.86e-71 236
Msa1029190 MtrunA17_Chr6g0451781 30.943 488 316 7 27 497 67 550 8.08e-71 236
Msa1029190 MtrunA17_Chr2g0280261 33.263 472 293 7 31 495 31 487 4.82e-70 232
Msa1029190 MtrunA17_Chr4g0046351 31.237 493 285 11 35 495 35 505 1.13e-69 231
Msa1029190 MtrunA17_Chr4g0011881 31.020 490 311 8 23 502 24 496 2.60e-69 230
Msa1029190 MtrunA17_Chr4g0046331 31.098 492 289 11 35 495 35 507 9.41e-69 229
Msa1029190 MtrunA17_Chr1g0156061 31.770 469 261 7 25 491 46 457 5.97e-68 225
Msa1029190 MtrunA17_Chr8g0351801 29.598 473 307 8 44 495 44 511 7.00e-68 227
Msa1029190 MtrunA17_Chr4g0017411 32.992 488 288 14 18 495 14 472 4.20e-67 224
Msa1029190 MtrunA17_Chr2g0296651 30.986 497 315 11 13 497 5 485 7.23e-66 221
Msa1029190 MtrunA17_Chr5g0423621 57.143 182 76 1 319 500 1 180 9.29e-66 210
Msa1029190 MtrunA17_Chr6g0451641 31.837 490 299 15 30 497 34 510 1.08e-65 221
Msa1029190 MtrunA17_Chr6g0451751 29.924 528 312 16 5 497 13 517 1.76e-65 221
Msa1029190 MtrunA17_Chr8g0377341 31.134 485 306 13 23 500 60 523 5.91e-65 219
Msa1029190 MtrunA17_Chr4g0046631 31.250 528 323 14 1 504 7 518 7.64e-65 219
Msa1029190 MtrunA17_Chr4g0008101 31.358 523 322 17 5 504 15 523 9.38e-65 219
Msa1029190 MtrunA17_Chr6g0458561 29.825 513 328 12 12 504 27 527 1.47e-64 218
Msa1029190 MtrunA17_Chr6g0451691 30.675 489 304 13 35 497 42 521 6.83e-64 216
Msa1029190 MtrunA17_Chr6g0451741 29.825 513 325 13 18 504 42 545 2.07e-63 216
Msa1029190 MtrunA17_Chr5g0430111 33.668 398 249 6 33 423 36 425 4.92e-63 211
Msa1029190 MtrunA17_Chr5g0419451 28.750 480 322 12 26 500 51 515 9.63e-63 213
Msa1029190 MtrunA17_Chr8g0339331 30.181 497 316 14 26 504 31 514 9.64e-63 213
Msa1029190 MtrunA17_Chr2g0296661 34.573 457 273 9 52 497 49 490 1.05e-62 213
Msa1029190 MtrunA17_Chr5g0432751 30.856 444 293 7 33 467 32 470 1.12e-62 213
Msa1029190 MtrunA17_Chr1g0198191 28.743 501 334 12 3 490 15 505 2.89e-60 206
Msa1029190 MtrunA17_Chr6g0466941 31.440 493 303 11 1 467 1 484 1.72e-59 204
Msa1029190 MtrunA17_Chr2g0304871 29.865 519 331 11 1 499 5 510 5.56e-59 203
Msa1029190 MtrunA17_Chr8g0339311 29.057 530 329 16 1 497 1 516 1.03e-58 202
Msa1029190 MtrunA17_Chr1g0200951 30.041 486 295 17 37 500 64 526 1.16e-58 202
Msa1029190 MtrunA17_Chr3g0082701 29.032 527 342 14 3 504 5 524 2.52e-58 201
Msa1029190 MtrunA17_Chr6g0466901 30.710 521 324 14 9 504 8 516 7.34e-58 200
Msa1029190 MtrunA17_Chr2g0314781 48.901 182 84 2 319 500 1 173 1.26e-57 189
Msa1029190 MtrunA17_Chr1g0174431 47.000 200 97 3 303 495 1 198 1.58e-57 190
Msa1029190 MtrunA17_Chr5g0430071 34.688 320 198 5 185 497 37 352 4.72e-57 194
Msa1029190 MtrunA17_Chr5g0431591 33.788 293 189 3 206 495 21 311 2.31e-56 191
Msa1029190 MtrunA17_Chr7g0246141 87.000 100 13 0 202 301 2 101 6.22e-56 182
Msa1029190 MtrunA17_Chr5g0409051 30.000 510 316 14 8 490 3 498 6.61e-55 192
Msa1029190 MtrunA17_Chr4g0011851 45.050 202 111 0 301 502 14 215 1.39e-54 182
Msa1029190 MtrunA17_Chr8g0346261 28.298 470 316 12 36 498 86 541 3.03e-54 191
Msa1029190 MtrunA17_Chr2g0280071 30.814 516 325 13 4 502 35 535 5.54e-54 193
Msa1029190 MtrunA17_Chr8g0370641 28.340 494 325 11 1 470 1 489 5.93e-54 189
Msa1029190 MtrunA17_Chr1g0210091 28.694 467 294 12 43 487 74 523 1.71e-53 189
Msa1029190 MtrunA17_Chr4g0011941 45.078 193 106 0 303 495 1 193 2.36e-53 179
Msa1029190 MtrunA17_Chr2g0280121 31.291 457 283 13 65 504 68 510 5.70e-53 187
Msa1029190 MtrunA17_Chr2g0280081 30.369 461 294 12 58 504 558 1005 3.66e-52 190
Msa1029190 MtrunA17_Chr2g0280081 29.621 449 284 11 58 489 57 490 3.75e-45 170
Msa1029190 MtrunA17_Chr8g0364651 29.981 527 311 20 5 504 4 499 5.76e-52 184
Msa1029190 MtrunA17_Chr3g0107611 26.804 485 326 7 7 469 23 500 1.41e-51 183
Msa1029190 MtrunA17_Chr5g0413911 28.906 512 298 16 32 501 40 527 1.95e-51 183
Msa1029190 MtrunA17_Chr5g0446101 38.525 244 148 2 255 497 66 308 2.62e-51 177
Msa1029190 MtrunA17_Chr6g0477081 38.618 246 137 2 168 413 10 241 3.42e-51 174
Msa1029190 MtrunA17_Chr2g0280041 30.577 520 325 14 4 504 34 536 3.71e-51 182
Msa1029190 MtrunA17_Chr2g0310351 41.969 193 112 0 303 495 1 193 1.26e-50 171
Msa1029190 MtrunA17_Chr1g0176851 38.655 238 142 2 120 357 1 234 6.56e-50 171
Msa1029190 MtrunA17_Chr3g0107541 27.556 450 292 6 43 470 59 496 1.45e-49 178
Msa1029190 MtrunA17_Chr2g0334021 27.743 483 322 12 28 498 27 494 6.68e-49 176
Msa1029190 MtrunA17_Chr3g0086681 50.000 164 76 2 339 498 3 164 1.05e-48 166
Msa1029190 MtrunA17_Chr8g0370651 27.447 521 347 13 5 504 13 523 2.61e-48 174
Msa1029190 MtrunA17_Chr4g0058211 40.796 201 114 2 298 495 11 209 3.44e-48 166
Msa1029190 MtrunA17_Chr6g0451771 40.376 213 121 3 294 504 13 221 1.22e-47 164
Msa1029190 MtrunA17_Chr6g0451811 40.865 208 117 3 299 504 1 204 4.75e-47 162
Msa1029190 MtrunA17_Chr3g0101591 37.629 194 121 0 302 495 38 231 6.88e-47 163
Msa1029190 MtrunA17_Chr8g0390871 36.019 211 133 2 286 495 10 219 7.87e-47 162
Msa1029190 MtrunA17_Chr4g0074581 25.662 491 326 15 1 468 37 511 2.36e-46 169
Msa1029190 MtrunA17_Chr6g0463621 39.896 193 111 3 303 491 1 192 9.07e-46 159
Msa1029190 MtrunA17_Chr4g0046681 38.938 226 129 4 274 497 6 224 1.81e-45 159
Msa1029190 MtrunA17_Chr5g0445761 48.023 177 92 0 303 479 1 177 2.90e-45 157
Msa1029190 MtrunA17_Chr8g0387101 30.344 524 324 15 4 504 2 507 9.18e-45 164
Msa1029190 MtrunA17_Chr6g0451681 40.201 199 114 2 301 497 275 470 5.66e-43 159
Msa1029190 MtrunA17_Chr6g0451681 29.286 140 97 1 18 155 45 184 2.87e-14 75.1
Msa1029190 MtrunA17_Chr3g0101541 48.507 134 69 0 353 486 3 136 1.76e-42 147
Msa1029190 MtrunA17_Chr8g0364631 28.893 488 319 11 28 498 26 502 1.87e-42 158
Msa1029190 MtrunA17_Chr5g0445351 40.606 165 98 0 331 495 52 216 2.60e-41 147
Msa1029190 MtrunA17_Chr5g0430151 42.262 168 96 1 329 495 1 168 3.34e-41 145
Msa1029190 MtrunA17_Chr5g0402981 40.722 194 108 4 314 504 3 192 4.44e-41 146
Msa1029190 MtrunA17_Chr5g0444981 48.538 171 87 1 315 485 23 192 2.00e-40 145
Msa1029190 MtrunA17_Chr5g0445371 33.208 265 137 5 241 501 1 229 8.02e-39 141
Msa1029190 MtrunA17_Chr5g0430041 38.824 170 97 2 329 491 1 170 1.76e-38 138
Msa1029190 MtrunA17_Chr4g0046661 40.201 199 114 2 301 497 23 218 8.51e-38 138
Msa1029190 MtrunA17_Chr2g0280011 37.788 217 122 6 296 504 1 212 8.83e-36 132
Msa1029190 MtrunA17_Chr4g0046701 42.208 154 84 2 346 497 2 152 9.83e-36 130
Msa1029190 MtrunA17_Chr2g0314771 38.889 162 97 1 69 230 1 160 1.44e-35 130
Msa1029190 MtrunA17_Chr2g0280061 36.866 217 124 6 296 504 1 212 3.46e-33 125
Msa1029190 MtrunA17_Chr5g0445361 43.443 122 69 0 374 495 9 130 4.17e-32 120
Msa1029190 MtrunA17_Chr4g0028321 42.857 126 71 1 371 495 25 150 6.83e-32 120
Msa1029190 MtrunA17_Chr3g0117301 39.130 115 70 0 354 468 1 115 5.97e-31 116
Msa1029190 MtrunA17_Chr4g0030741 28.228 333 213 7 1 323 30 346 1.05e-30 122
Msa1029190 MtrunA17_Chr3g0107551 35.088 171 108 1 302 469 4 174 5.81e-30 116
Msa1029190 MtrunA17_Chr3g0105761 36.095 169 103 2 305 470 2 168 1.10e-29 115
Msa1029190 MtrunA17_Chr3g0116731 37.671 146 70 3 356 498 3 130 3.95e-28 108
Msa1029190 MtrunA17_Chr4g0076171 37.430 179 85 4 319 491 1 158 5.25e-28 109
Msa1029190 MtrunA17_Chr5g0445751 32.677 254 156 8 21 270 32 274 1.54e-27 112
Msa1029190 MtrunA17_Chr1g0174421 25.856 263 191 4 34 294 47 307 1.15e-26 110
Msa1029190 MtrunA17_Chr0c19g0493771 24.711 433 289 16 58 473 211 623 9.67e-26 111
Msa1029190 MtrunA17_Chr8g0334891 25.000 464 286 13 29 470 33 456 9.98e-26 110
Msa1029190 MtrunA17_Chr4g0011861 28.352 261 169 7 23 275 23 273 1.98e-25 106
Msa1029190 MtrunA17_Chr6g0463611 27.682 289 183 8 1 279 15 287 7.40e-25 105
Msa1029190 MtrunA17_Chr8g0334941 28.882 322 199 11 158 470 1 301 4.87e-24 102
Msa1029190 MtrunA17_Chr8g0351441 25.450 389 265 11 126 497 126 506 9.11e-24 104
Msa1029190 MtrunA17_Chr8g0351401 25.000 396 254 11 126 495 127 505 1.85e-23 103
Msa1029190 MtrunA17_Chr5g0396521 25.386 453 272 17 65 467 103 539 2.32e-23 103
Msa1029190 MtrunA17_Chr5g0423601 52.564 78 37 0 117 194 1 78 2.76e-23 94.0
Msa1029190 MtrunA17_Chr1g0176861 57.471 87 34 1 6 92 12 95 3.01e-23 94.0
Msa1029190 MtrunA17_Chr8g0351461 24.806 387 266 11 126 495 126 504 9.49e-23 101
Msa1029190 MtrunA17_Chr3g0107561 25.263 285 199 3 7 280 18 299 1.10e-22 99.0
Msa1029190 MtrunA17_Chr2g0310371 35.664 143 89 1 13 152 4 146 1.66e-22 93.6
Msa1029190 MtrunA17_Chr8g0351421 25.450 389 265 12 126 497 127 507 5.90e-22 99.0
Msa1029190 MtrunA17_Chr5g0430171 38.406 138 84 1 26 163 30 166 8.39e-22 94.0
Msa1029190 MtrunA17_Chr1g0204271 21.875 480 336 14 42 500 43 504 9.08e-22 98.2
Msa1029190 MtrunA17_Chr8g0351311 24.808 391 265 11 126 500 133 510 1.09e-21 98.2
Msa1029190 MtrunA17_Chr2g0293411 23.319 476 320 18 6 467 14 458 1.25e-21 97.8
Msa1029190 MtrunA17_Chr6g0472221 24.386 529 311 19 1 470 1 499 1.43e-21 97.8
Msa1029190 MtrunA17_Chr3g0105751 25.347 288 191 4 10 280 21 301 1.88e-21 96.3
Msa1029190 MtrunA17_Chr8g0351391 24.932 369 239 12 126 472 133 485 3.58e-21 96.7
Msa1029190 MtrunA17_Chr2g0293421 22.754 501 309 18 1 467 3 459 4.20e-21 96.3
Msa1029190 MtrunA17_Chr4g0011931 24.908 273 197 6 7 275 4 272 4.72e-21 93.6
Msa1029190 MtrunA17_Chr3g0141801 24.307 469 293 14 26 473 33 460 8.39e-21 95.5
Msa1029190 MtrunA17_Chr4g0030761 32.237 152 76 5 354 495 1 135 9.01e-21 89.0
Msa1029190 MtrunA17_Chr1g0151221 22.510 502 336 16 36 500 41 526 9.82e-21 95.5
Msa1029190 MtrunA17_Chr1g0207851 26.568 271 186 4 41 301 45 312 2.81e-20 92.4
Msa1029190 MtrunA17_Chr1g0179811 25.116 430 283 16 58 467 101 511 2.91e-20 94.0
Msa1029190 MtrunA17_Chr2g0288661 24.537 432 280 13 58 470 87 491 3.60e-20 93.6
Msa1029190 MtrunA17_Chr4g0056981 51.389 72 35 0 329 400 1 72 1.19e-19 83.2
Msa1029190 MtrunA17_Chr5g0423611 50.000 80 38 1 214 293 1 78 1.29e-19 83.2
Msa1029190 MtrunA17_Chr8g0372591 31.111 135 90 1 301 435 1 132 1.72e-19 85.1
Msa1029190 MtrunA17_Chr3g0117321 33.884 121 80 0 32 152 5 125 4.55e-19 83.2
Msa1029190 MtrunA17_Chr1g0203151 28.139 231 157 7 246 473 263 487 8.65e-19 89.4
Msa1029190 MtrunA17_Chr4g0046691 26.515 264 174 7 30 284 35 287 1.01e-18 87.0
Msa1029190 MtrunA17_Chr1g0203141 23.932 468 288 18 37 466 47 484 2.11e-18 88.2
Msa1029190 MtrunA17_Chr8g0387001 25.523 239 161 3 236 463 239 471 1.13e-17 85.9
Msa1029190 MtrunA17_Chr8g0381571 23.366 505 304 18 1 467 1 460 1.39e-17 85.5
Msa1029190 MtrunA17_Chr5g0403931 24.385 488 311 18 5 472 7 456 1.40e-17 85.5
Msa1029190 MtrunA17_Chr5g0445411 28.235 170 116 2 1 164 8 177 1.73e-17 80.5
Msa1029190 MtrunA17_Chr8g0381541 23.494 498 312 17 1 467 1 460 2.17e-17 84.7
Msa1029190 MtrunA17_Chr5g0431631 30.882 136 92 1 8 141 24 159 5.23e-17 78.6
Msa1029190 MtrunA17_Chr4g0038271 22.607 491 328 18 9 466 58 529 7.86e-17 83.6
Msa1029190 MtrunA17_Chr4g0067191 20.553 506 329 15 13 470 8 488 1.09e-16 82.8
Msa1029190 MtrunA17_Chr4g0004601 31.953 169 112 3 303 470 338 504 1.43e-16 82.4
Msa1029190 MtrunA17_Chr6g0479681 26.423 246 158 8 246 473 265 505 1.53e-16 82.4
Msa1029190 MtrunA17_Chr8g0348751 21.375 538 349 18 1 497 1 505 8.79e-16 80.1
Msa1029190 MtrunA17_Chr6g0449331 27.451 255 153 7 236 466 238 484 9.73e-16 79.7
Msa1029190 MtrunA17_Chr5g0430051 50.633 79 34 1 23 101 32 105 1.16e-15 73.2
Msa1029190 MtrunA17_Chr1g0163211 22.880 507 327 19 1 473 1 477 1.54e-15 79.0
Msa1029190 MtrunA17_Chr8g0341951 21.984 514 334 17 5 494 4 474 1.66e-15 79.0
Msa1029190 MtrunA17_Chr4g0063221 29.240 171 119 2 302 471 324 493 4.66e-15 77.8
Msa1029190 MtrunA17_Chr8g0372411 23.385 449 293 14 35 468 40 452 5.16e-15 77.4
Msa1029190 MtrunA17_Chr7g0260831 22.026 454 308 15 38 467 39 470 5.44e-15 77.4
Msa1029190 MtrunA17_Chr7g0235261 30.178 169 115 3 303 470 317 483 9.41e-15 76.6
Msa1029190 MtrunA17_Chr2g0313781 25.352 284 187 8 203 470 227 501 9.61e-15 76.6
Msa1029190 MtrunA17_Chr8g0362731 28.994 169 117 3 303 470 215 381 1.54e-14 75.5
Msa1029190 MtrunA17_Chr4g0046671 23.929 280 184 8 23 283 30 299 1.65e-14 74.7
Msa1029190 MtrunA17_Chr5g0400411 21.649 485 332 16 1 466 4 459 1.67e-14 75.9
Msa1029190 MtrunA17_Chr5g0400421 20.774 491 332 16 1 467 4 461 5.64e-14 74.3
Msa1029190 MtrunA17_Chr2g0313791 24.579 297 199 8 190 470 197 484 6.07e-14 74.3
Msa1029190 MtrunA17_Chr1g0184421 20.474 464 329 11 24 467 29 472 6.46e-14 73.9
Msa1029190 MtrunA17_Chr5g0445541 35.644 101 63 1 3 101 7 107 7.17e-14 68.9
Msa1029190 MtrunA17_Chr5g0402971 25.952 289 199 7 3 280 10 294 1.08e-13 72.0
Msa1029190 MtrunA17_Chr7g0219961 27.711 249 152 8 235 476 217 444 1.75e-13 72.4
Msa1029190 MtrunA17_Chr1g0164321 27.568 185 111 6 301 466 336 516 1.90e-13 72.8
Msa1029190 MtrunA17_Chr2g0307301 27.240 279 188 8 203 470 217 491 1.91e-13 72.8
Msa1029190 MtrunA17_Chr8g0354531 26.984 252 158 7 234 470 378 618 1.97e-13 72.8
Msa1029190 MtrunA17_Chr2g0307291 27.778 252 169 8 227 470 245 491 2.34e-13 72.4
Msa1029190 MtrunA17_Chr2g0313811 25.000 248 172 6 232 470 259 501 4.92e-13 71.2
Msa1029190 MtrunA17_Chr1g0171041 22.957 514 308 23 12 473 6 483 5.50e-13 71.2
Msa1029190 MtrunA17_Chr3g0104351 26.818 220 140 6 294 497 297 511 7.03e-13 70.9
Msa1029190 MtrunA17_Chr8g0339861 24.525 526 291 24 1 482 1 464 8.40e-13 70.5
Msa1029190 MtrunA17_Chr3g0128461 25.333 225 155 6 255 475 287 502 1.22e-12 70.1
Msa1029190 MtrunA17_Chr2g0313821 26.038 265 181 7 215 470 231 489 3.18e-12 68.9
Msa1029190 MtrunA17_Chr6g0472171 31.757 148 91 7 355 495 14 158 3.62e-12 64.3
Msa1029190 MtrunA17_Chr6g0451801 21.786 280 203 4 20 283 25 304 4.41e-12 67.4
Msa1029190 MtrunA17_Chr1g0154731 24.339 189 137 3 284 471 294 477 5.06e-12 68.2
Msa1029190 MtrunA17_Chr1g0193811 22.078 462 316 14 54 497 83 518 5.07e-12 68.2
Msa1029190 MtrunA17_Chr2g0313801 24.506 253 169 7 232 471 247 490 6.05e-12 67.8
Msa1029190 MtrunA17_Chr1g0164371 22.266 503 294 15 8 475 18 458 6.34e-12 67.8
Msa1029190 MtrunA17_Chr1g0163511 24.547 497 318 23 15 473 18 495 7.24e-12 67.8
Msa1029190 MtrunA17_Chr1g0163491 27.039 233 141 11 257 473 278 497 8.23e-12 67.4
Msa1029190 MtrunA17_Chr8g0388921 21.881 489 307 16 6 468 10 449 1.36e-11 66.6
Msa1029190 MtrunA17_Chr4g0044841 21.535 469 307 17 19 471 23 446 3.43e-11 65.5
Msa1029190 MtrunA17_Chr8g0381561 33.333 114 71 3 353 466 2 110 3.74e-11 60.8
Msa1029190 MtrunA17_Chr8g0372331 30.435 115 74 3 388 499 9 120 3.95e-11 60.8
Msa1029190 MtrunA17_Chr1g0163351 24.538 379 243 15 123 473 118 481 3.95e-11 65.5
Msa1029190 MtrunA17_Chr7g0227281 24.670 227 151 7 253 467 246 464 4.65e-11 65.1
Msa1029190 MtrunA17_Chr1g0163501 30.000 190 106 9 301 473 296 475 7.61e-11 64.3
Msa1029190 MtrunA17_Chr6g0449381 25.098 255 170 6 235 473 232 481 7.81e-11 64.3
Msa1029190 MtrunA17_Chr1g0182861 30.556 144 92 6 357 495 23 163 9.29e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1029190 AT2G45550.1 45.749 494 260 7 6 495 11 500 1.28e-153 448
Msa1029190 AT2G45560.1 44.939 494 265 4 6 495 10 500 7.19e-151 441
Msa1029190 AT1G33720.1 47.335 469 238 5 32 495 36 500 3.15e-150 439
Msa1029190 AT3G61040.1 46.352 466 243 3 31 495 30 489 7.03e-147 430
Msa1029190 AT2G45570.1 46.070 458 239 4 43 495 47 501 1.03e-143 422
Msa1029190 AT2G45580.1 44.639 457 245 3 44 495 48 501 4.64e-141 416
Msa1029190 AT1G33730.1 49.041 365 178 4 135 495 4 364 1.78e-122 363
Msa1029190 AT1G33730.2 49.041 365 178 4 135 495 4 364 1.78e-122 363
Msa1029190 AT1G33720.4 47.439 371 187 4 129 495 2 368 4.21e-116 347
Msa1029190 AT1G33720.3 47.439 371 187 4 129 495 2 368 4.21e-116 347
Msa1029190 AT1G33720.5 47.439 371 187 4 129 495 2 368 4.21e-116 347
Msa1029190 AT4G12320.1 38.622 479 286 5 21 495 29 503 7.94e-116 352
Msa1029190 AT4G12300.1 38.571 490 291 5 8 495 20 501 1.31e-115 351
Msa1029190 AT5G07990.1 36.800 500 302 5 8 498 4 498 2.03e-113 345
Msa1029190 AT3G52970.1 38.400 500 295 9 6 495 10 506 2.81e-113 345
Msa1029190 AT3G52970.2 37.354 514 295 9 6 495 10 520 5.31e-111 339
Msa1029190 AT1G33720.2 43.909 394 192 5 129 495 2 393 6.35e-108 327
Msa1029190 AT4G12310.1 38.562 459 274 5 41 495 51 505 2.10e-107 330
Msa1029190 AT5G44620.1 34.949 495 315 2 1 495 17 504 2.08e-105 325
Msa1029190 AT4G12330.1 36.980 457 276 6 43 495 55 503 1.36e-103 320
Msa1029190 AT2G45580.2 44.413 349 186 3 152 495 2 347 4.64e-102 311
Msa1029190 AT4G22690.1 35.412 497 309 6 3 495 53 541 6.61e-102 317
Msa1029190 AT4G22710.1 35.886 457 281 6 43 495 62 510 2.13e-100 312
Msa1029190 AT5G25140.1 33.939 495 311 6 7 497 6 488 3.43e-98 305
Msa1029190 AT2G45580.3 43.017 358 196 3 44 396 48 402 5.44e-97 299
Msa1029190 AT3G61040.2 42.276 369 206 3 32 399 31 393 2.49e-96 297
Msa1029190 AT5G25180.1 33.265 487 305 9 18 497 15 488 2.59e-95 298
Msa1029190 AT5G25120.1 32.335 501 317 9 5 497 2 488 1.05e-93 294
Msa1029190 AT5G25130.1 33.267 499 315 8 5 497 2 488 5.72e-93 292
Msa1029190 AT2G40890.1 32.143 504 319 7 6 501 4 492 1.58e-91 288
Msa1029190 AT3G26300.1 33.061 490 315 7 6 491 6 486 1.64e-91 288
Msa1029190 AT5G57260.1 32.548 467 297 6 32 488 28 486 7.06e-87 276
Msa1029190 AT5G06900.1 33.538 489 311 7 9 495 9 485 2.09e-86 275
Msa1029190 AT4G36220.1 33.970 471 286 8 41 495 47 508 6.01e-85 272
Msa1029190 AT4G13770.1 32.245 490 318 9 15 497 12 494 3.64e-84 269
Msa1029190 AT3G26330.1 32.900 462 298 5 35 491 32 486 6.68e-84 268
Msa1029190 AT3G26310.1 30.786 458 311 3 36 491 32 485 1.05e-81 263
Msa1029190 AT4G31500.1 30.707 495 332 7 6 495 3 491 1.59e-80 259
Msa1029190 AT5G04330.1 32.553 470 303 9 35 495 33 497 2.72e-80 259
Msa1029190 AT3G26320.1 31.356 472 308 6 27 491 24 486 3.57e-80 259
Msa1029190 AT4G37430.1 31.377 494 309 12 17 497 11 487 4.15e-79 256
Msa1029190 AT2G30770.1 30.753 465 311 8 34 495 33 489 7.19e-79 255
Msa1029190 AT3G26280.1 32.927 492 307 10 17 497 17 496 1.51e-78 254
Msa1029190 AT3G26280.2 32.927 492 307 10 17 497 34 513 2.51e-78 254
Msa1029190 AT3G48280.1 30.219 503 333 10 6 504 1 489 1.85e-77 251
Msa1029190 AT3G26180.1 30.672 476 309 8 34 497 30 496 7.33e-77 250
Msa1029190 AT3G26170.1 29.980 507 327 10 8 497 1 496 7.57e-77 250
Msa1029190 AT1G13080.1 31.006 487 327 5 18 497 12 496 1.06e-76 249
Msa1029190 AT3G48300.1 31.034 464 301 7 36 497 31 477 1.02e-75 246
Msa1029190 AT3G48300.2 31.034 464 301 7 36 497 33 479 1.07e-75 246
Msa1029190 AT3G48310.1 28.664 464 314 7 35 495 33 482 1.22e-75 246
Msa1029190 AT1G13110.1 31.140 456 307 5 33 483 31 484 3.10e-75 246
Msa1029190 AT3G26270.1 30.579 484 306 8 29 497 27 495 3.63e-75 246
Msa1029190 AT2G30750.1 31.857 474 312 8 25 495 24 489 5.88e-75 245
Msa1029190 AT3G26210.1 32.533 458 292 7 43 491 40 489 2.29e-74 243
Msa1029190 AT3G26230.1 32.200 500 323 8 5 497 2 492 2.44e-74 243
Msa1029190 AT3G26290.1 32.112 464 305 4 36 495 33 490 2.48e-74 243
Msa1029190 AT3G26290.2 32.112 464 305 4 36 495 46 503 3.28e-74 243
Msa1029190 AT3G48270.1 29.032 465 309 9 36 495 33 481 4.89e-73 239
Msa1029190 AT1G11610.1 30.508 472 317 8 27 495 26 489 1.17e-72 239
Msa1029190 AT2G42250.1 30.677 502 329 7 6 495 9 503 7.24e-72 237
Msa1029190 AT4G37410.1 31.635 471 299 10 34 497 30 484 1.95e-71 236
Msa1029190 AT1G74550.1 31.111 495 322 8 8 501 3 479 5.29e-71 234
Msa1029190 AT1G11610.2 30.128 468 316 8 27 491 26 485 6.09e-71 234
Msa1029190 AT3G48290.1 27.214 463 322 5 35 495 34 483 1.29e-70 233
Msa1029190 AT4G37370.1 30.632 506 313 12 1 495 1 479 2.00e-70 233
Msa1029190 AT4G37310.1 32.613 509 309 14 6 497 4 495 2.06e-70 234
Msa1029190 AT2G02580.1 33.193 476 297 8 23 491 25 486 3.21e-70 233
Msa1029190 AT5G24950.1 27.968 497 343 7 8 497 3 491 4.64e-70 232
Msa1029190 AT4G37320.1 31.262 515 311 14 5 504 4 490 9.27e-70 231
Msa1029190 AT4G37330.1 31.111 495 317 9 7 497 6 480 1.10e-69 231
Msa1029190 AT2G24180.1 30.000 470 311 6 34 497 36 493 1.86e-69 231
Msa1029190 AT4G15360.1 30.080 502 320 12 6 495 16 498 1.96e-69 231
Msa1029190 AT1G01280.1 29.211 469 311 7 43 499 41 500 3.11e-69 230
Msa1029190 AT3G20140.1 30.947 475 310 9 28 496 36 498 3.46e-69 230
Msa1029190 AT4G37360.1 30.321 498 318 11 7 495 4 481 7.16e-69 229
Msa1029190 AT5G06905.1 28.931 477 320 6 17 477 14 487 1.05e-68 229
Msa1029190 AT1G13090.2 31.151 443 296 6 33 470 27 465 1.20e-68 228
Msa1029190 AT3G26830.1 31.458 480 319 9 13 485 5 481 1.69e-68 228
Msa1029190 AT3G26160.1 30.898 479 309 10 34 497 30 501 1.71e-68 228
Msa1029190 AT3G26190.1 30.000 470 321 5 33 497 27 493 1.73e-68 228
Msa1029190 AT4G13290.1 30.316 475 306 7 28 495 27 483 1.82e-68 228
Msa1029190 AT5G57220.1 30.947 475 291 15 34 497 30 478 2.00e-68 228
Msa1029190 AT3G26150.1 28.854 506 341 8 1 497 1 496 1.01e-67 226
Msa1029190 AT1G74540.1 31.034 493 309 9 16 496 7 480 1.24e-67 226
Msa1029190 AT3G26200.1 29.787 470 322 5 33 497 27 493 1.58e-67 226
Msa1029190 AT4G31970.1 31.923 520 318 13 12 504 7 517 3.32e-67 225
Msa1029190 AT5G10600.1 31.873 502 306 16 7 495 21 499 4.83e-67 224
Msa1029190 AT4G13310.1 28.908 467 319 8 34 495 32 490 5.71e-67 224
Msa1029190 AT2G23220.1 31.448 442 281 10 34 468 46 472 5.82e-67 224
Msa1029190 AT5G67310.1 29.810 473 313 9 27 495 35 492 7.14e-67 224
Msa1029190 AT4G31940.1 31.985 519 316 13 12 502 7 516 2.02e-66 223
Msa1029190 AT3G20960.2 31.868 455 287 9 60 504 68 509 2.55e-66 223
Msa1029190 AT3G48320.1 28.713 505 339 10 1 501 1 488 3.31e-66 222
Msa1029190 AT3G28740.1 32.780 482 288 14 34 503 39 496 5.48e-66 222
Msa1029190 AT3G48290.2 26.132 486 324 7 35 495 34 509 6.48e-66 222
Msa1029190 AT3G20120.4 31.347 453 293 9 55 500 63 504 2.09e-65 220
Msa1029190 AT4G37340.1 30.303 495 313 13 1 486 1 472 2.29e-65 220
Msa1029190 AT3G53280.1 30.819 464 311 6 33 491 27 485 3.02e-65 219
Msa1029190 AT5G10610.1 29.234 496 326 10 7 495 6 483 4.20e-65 219
Msa1029190 AT4G37400.1 29.888 445 294 10 55 495 52 482 5.47e-65 219
Msa1029190 AT3G44250.1 30.556 468 316 6 33 495 27 490 6.57e-65 219
Msa1029190 AT3G20110.1 31.048 496 317 11 6 495 14 490 1.05e-64 218
Msa1029190 AT5G36220.1 29.134 508 330 10 1 497 1 489 1.59e-64 218
Msa1029190 AT3G20090.2 29.956 454 299 9 55 500 65 507 2.16e-64 218
Msa1029190 AT1G13710.1 29.322 457 304 9 51 500 66 510 5.21e-64 217
Msa1029190 AT2G23190.1 30.169 474 297 12 8 468 49 501 1.53e-63 216
Msa1029190 AT3G26220.1 31.434 509 324 8 5 500 2 498 3.79e-63 214
Msa1029190 AT5G04630.1 30.097 515 328 13 3 499 7 507 5.47e-63 214
Msa1029190 AT2G14100.1 30.128 468 282 11 54 501 64 506 6.53e-63 214
Msa1029190 AT3G53300.1 29.263 475 328 5 33 502 27 498 9.35e-63 213
Msa1029190 AT5G09970.1 29.810 473 308 12 36 497 71 530 2.36e-62 213
Msa1029190 AT3G20130.1 28.947 456 303 10 55 501 64 507 5.64e-62 211
Msa1029190 AT3G10560.1 30.801 487 298 14 5 468 10 480 7.78e-62 211
Msa1029190 AT4G15350.1 30.303 462 296 10 55 504 57 504 8.50e-62 211
Msa1029190 AT5G42590.1 27.510 498 346 8 7 497 3 492 1.26e-61 210
Msa1029190 AT2G45560.2 37.374 297 179 4 6 298 10 303 1.61e-61 204
Msa1029190 AT4G31950.1 31.335 517 314 15 12 504 7 506 3.63e-61 209
Msa1029190 AT5G42580.1 29.956 454 289 8 54 500 60 491 4.14e-61 208
Msa1029190 AT4G15330.1 30.505 495 307 11 8 486 12 485 4.91e-61 209
Msa1029190 AT2G27000.1 31.798 456 281 12 55 496 61 500 1.44e-60 207
Msa1029190 AT3G20960.1 33.083 399 244 9 116 504 21 406 1.68e-60 205
Msa1029190 AT3G20940.1 28.831 496 324 13 20 501 28 508 2.33e-60 207
Msa1029190 AT3G20950.1 28.911 505 328 12 6 495 17 505 2.86e-60 207
Msa1029190 AT3G20080.2 29.769 477 314 8 34 500 42 507 3.24e-60 207
Msa1029190 AT3G20080.1 29.769 477 314 8 34 500 42 507 3.24e-60 207
Msa1029190 AT5G35715.1 27.840 449 298 9 69 503 1 437 4.27e-60 204
Msa1029190 AT5G24960.1 29.350 477 326 6 25 497 23 492 4.35e-60 206
Msa1029190 AT1G13100.1 30.248 443 280 9 43 470 37 465 1.62e-59 204
Msa1029190 AT2G46660.1 27.310 487 316 13 23 495 59 521 1.93e-59 205
Msa1029190 AT5G47990.1 28.728 456 301 9 55 500 64 505 2.50e-59 204
Msa1029190 AT3G32047.1 29.885 435 288 6 54 483 63 485 5.89e-59 203
Msa1029190 AT3G61880.1 28.452 478 315 11 29 495 61 522 1.40e-58 202
Msa1029190 AT3G61880.2 28.452 478 315 11 29 495 61 522 2.76e-58 202
Msa1029190 AT1G66540.1 32.300 387 235 8 117 495 1 368 5.87e-58 197
Msa1029190 AT5G05260.2 28.452 478 301 9 16 468 29 490 6.08e-58 201
Msa1029190 AT3G20120.2 33.067 375 233 9 129 496 1 364 3.00e-57 195
Msa1029190 AT3G20120.3 33.067 375 233 9 129 496 1 364 3.00e-57 195
Msa1029190 AT3G20120.1 33.067 375 233 9 129 496 1 364 3.00e-57 195
Msa1029190 AT3G26180.2 38.462 260 154 4 241 497 106 362 3.56e-57 194
Msa1029190 AT3G25180.1 30.273 512 325 13 3 497 5 501 5.37e-57 198
Msa1029190 AT1G58260.1 27.888 502 310 11 5 473 11 493 6.55e-57 198
Msa1029190 AT3G20100.1 28.151 476 307 12 43 501 50 507 4.08e-56 196
Msa1029190 AT1G50520.1 27.753 454 310 8 56 501 66 509 4.36e-56 196
Msa1029190 AT1G13080.2 30.252 357 243 4 145 497 24 378 5.91e-56 192
Msa1029190 AT2G45560.3 39.394 231 139 1 6 235 10 240 1.64e-55 186
Msa1029190 AT4G15380.1 28.475 446 296 7 60 497 69 499 1.87e-55 194
Msa1029190 AT1G64940.1 28.794 514 334 14 7 500 5 506 1.90e-54 191
Msa1029190 AT1G79370.1 28.511 470 304 9 33 473 39 505 2.28e-54 191
Msa1029190 AT1G28430.1 28.200 461 299 10 55 500 62 505 6.07e-54 190
Msa1029190 AT5G04660.1 29.742 427 283 9 51 468 61 479 2.24e-53 188
Msa1029190 AT5G05260.1 27.615 478 273 9 16 468 29 458 4.62e-53 187
Msa1029190 AT2G25160.1 27.885 520 345 15 1 500 1 510 7.74e-53 187
Msa1029190 AT3G20090.1 30.526 380 245 9 129 500 1 369 1.28e-52 183
Msa1029190 AT1G01190.2 26.915 457 302 12 24 468 68 504 2.73e-52 186
Msa1029190 AT1G01190.1 26.915 457 302 12 24 468 63 499 3.57e-52 185
Msa1029190 AT3G20130.2 29.114 395 259 9 116 501 97 479 5.11e-52 184
Msa1029190 AT1G74110.1 27.329 483 320 13 36 500 65 534 5.41e-52 185
Msa1029190 AT1G50560.1 27.983 461 310 8 55 503 65 515 1.15e-51 184
Msa1029190 AT2G30490.1 29.796 490 293 12 6 467 3 469 2.29e-51 182
Msa1029190 AT2G27010.1 29.778 450 278 11 55 495 57 477 3.06e-51 182
Msa1029190 AT2G22330.1 26.939 490 323 10 6 471 27 505 4.05e-51 182
Msa1029190 AT2G22330.2 26.772 508 336 11 6 488 50 546 4.59e-51 183
Msa1029190 AT1G66540.2 33.750 320 192 7 177 495 9 309 6.20e-51 177
Msa1029190 AT4G39950.1 27.593 482 327 10 6 470 26 502 6.31e-50 179
Msa1029190 AT3G03470.1 29.377 514 313 17 1 485 1 493 6.64e-50 179
Msa1029190 AT1G11600.1 28.571 462 301 14 26 468 27 478 1.60e-49 177
Msa1029190 AT4G39950.2 27.593 482 327 10 6 470 66 542 1.99e-49 179
Msa1029190 AT1G64950.1 28.457 499 314 14 27 500 25 505 5.90e-49 176
Msa1029190 AT4G15330.2 28.485 495 289 12 8 486 12 457 3.55e-48 173
Msa1029190 AT5G25900.1 26.962 497 310 16 23 495 33 500 1.30e-47 172
Msa1029190 AT5G36220.2 32.781 302 182 6 198 497 61 343 2.15e-47 168
Msa1029190 AT1G64930.1 26.721 494 330 14 27 500 25 506 2.59e-47 172
Msa1029190 AT3G10570.1 28.446 457 305 11 51 497 63 507 3.74e-47 171
Msa1029190 AT2G05180.1 29.067 375 248 7 55 422 63 426 1.44e-46 168
Msa1029190 AT3G20080.4 29.610 385 251 7 129 504 1 374 4.01e-46 166
Msa1029190 AT3G20080.5 29.610 385 251 7 129 504 1 374 4.01e-46 166
Msa1029190 AT3G20080.6 29.610 385 251 7 129 504 1 374 4.01e-46 166
Msa1029190 AT3G20080.3 29.610 385 251 7 129 504 1 374 4.01e-46 166
Msa1029190 AT2G12190.1 28.144 501 317 16 26 500 24 507 4.72e-45 166
Msa1029190 AT5G61320.1 26.580 459 298 11 55 501 55 486 2.36e-42 158
Msa1029190 AT4G20240.1 25.862 406 285 7 28 428 27 421 7.72e-42 155
Msa1029190 AT1G16410.1 25.458 491 339 11 3 470 12 498 9.66e-41 154
Msa1029190 AT4G13310.2 27.248 367 255 7 34 396 32 390 1.03e-39 148
Msa1029190 AT1G64900.1 28.125 480 309 14 41 500 38 501 1.15e-37 145
Msa1029190 AT5G35917.1 25.821 457 272 13 34 469 42 452 1.27e-37 144
Msa1029190 AT3G20935.1 36.792 212 123 4 299 504 130 336 3.85e-37 140
Msa1029190 AT1G16400.1 24.346 497 332 11 6 470 13 497 4.88e-36 140
Msa1029190 AT4G20240.2 26.455 378 261 7 28 401 27 391 2.06e-33 131
Msa1029190 AT3G53290.1 28.307 378 238 7 126 497 50 400 2.62e-33 131
Msa1029190 AT5G24960.2 27.177 379 266 5 25 400 23 394 2.61e-32 128
Msa1029190 AT3G61035.1 31.111 270 161 10 43 305 51 302 1.83e-26 110
Msa1029190 AT1G16410.2 24.939 409 281 11 3 391 12 414 9.95e-26 109
Msa1029190 AT3G53305.1 43.704 135 71 1 353 487 187 316 1.45e-25 107
Msa1029190 AT2G25160.2 25.515 388 270 11 1 374 1 383 1.05e-24 106
Msa1029190 AT1G31800.1 24.783 460 302 18 65 500 139 578 6.13e-24 105
Msa1029190 AT3G25180.2 27.456 397 258 13 3 382 5 388 3.15e-23 102
Msa1029190 AT2G44890.1 21.818 495 351 13 1 472 1 482 7.34e-23 102
Msa1029190 AT2G45510.1 25.205 365 247 10 126 472 126 482 3.53e-22 100
Msa1029190 AT4G15110.1 25.435 460 264 17 65 467 110 547 8.75e-22 99.4
Msa1029190 AT3G53130.1 24.675 462 308 18 18 459 62 503 1.67e-21 98.2
Msa1029190 AT1G11680.1 23.975 488 310 15 4 470 11 458 8.60e-21 95.9
Msa1029190 AT3G26125.1 23.306 369 250 9 126 466 138 501 2.08e-20 94.7
Msa1029190 AT2G44890.2 22.065 494 333 15 1 472 1 464 2.04e-19 91.7
Msa1029190 AT1G19630.1 22.524 515 338 19 1 497 1 472 8.06e-19 89.7
Msa1029190 AT3G14680.1 23.587 407 281 11 73 470 100 485 1.39e-18 89.0
Msa1029190 AT1G63710.1 22.070 512 352 13 12 489 4 502 1.52e-18 89.0
Msa1029190 AT5G38450.1 24.409 508 331 13 6 475 2 494 1.96e-18 88.6
Msa1029190 AT3G14620.1 25.708 424 266 15 65 470 96 488 2.10e-18 88.6
Msa1029190 AT3G14630.1 23.798 416 289 12 63 470 86 481 2.41e-18 88.2
Msa1029190 AT2G23180.1 25.191 393 228 17 126 477 125 492 3.24e-18 87.8
Msa1029190 AT1G24540.1 21.351 459 321 13 37 466 42 489 3.43e-18 87.8
Msa1029190 AT3G14630.2 23.741 417 290 12 63 471 141 537 4.98e-18 87.4
Msa1029190 AT3G13730.1 23.577 492 312 17 24 492 41 491 7.06e-18 86.7
Msa1029190 AT5G35920.1 35.714 112 70 1 360 469 6 117 9.53e-18 80.9
Msa1029190 AT3G14660.1 24.384 406 279 11 73 470 100 485 1.29e-17 85.9
Msa1029190 AT5G02900.1 26.234 385 246 14 126 497 115 474 2.05e-17 85.1
Msa1029190 AT1G47620.1 27.500 240 153 9 258 477 257 495 2.16e-17 85.5
Msa1029190 AT4G39510.1 29.482 251 164 7 255 497 255 500 2.90e-17 85.1
Msa1029190 AT3G14690.1 23.798 416 287 11 60 466 87 481 3.21e-17 84.7
Msa1029190 AT3G14650.1 24.570 407 277 12 73 470 100 485 3.84e-17 84.7
Msa1029190 AT3G14690.2 23.571 420 291 11 60 470 122 520 4.12e-17 84.7
Msa1029190 AT5G52400.1 29.218 243 156 7 240 475 264 497 6.93e-17 84.0
Msa1029190 AT1G13150.1 23.770 366 244 11 126 466 131 486 8.01e-17 83.6
Msa1029190 AT2G46960.1 27.200 250 171 7 253 495 156 401 1.07e-16 82.4
Msa1029190 AT2G46960.2 25.403 248 178 5 253 495 272 517 1.24e-16 83.2
Msa1029190 AT3G13730.2 24.086 465 291 16 24 467 41 464 1.51e-16 82.4
Msa1029190 AT4G00360.1 25.385 260 169 7 236 477 239 491 1.54e-16 82.8
Msa1029190 AT3G14640.1 23.096 407 285 10 73 470 100 487 1.56e-16 82.8
Msa1029190 AT3G14640.2 23.096 407 285 10 73 470 122 509 2.09e-16 82.4
Msa1029190 AT1G13140.1 23.770 366 244 13 126 466 138 493 2.32e-16 82.4
Msa1029190 AT3G14660.2 25.397 315 215 8 161 470 40 339 2.45e-16 81.3
Msa1029190 AT4G39490.1 24.444 270 167 9 236 477 236 496 4.22e-16 81.3
Msa1029190 AT1G01600.1 26.667 270 183 7 222 477 225 493 4.68e-16 81.3
Msa1029190 AT2G46950.1 23.480 477 329 15 22 487 112 563 6.46e-16 80.9
Msa1029190 AT1G57750.1 25.703 249 170 8 236 477 236 476 6.86e-16 80.5
Msa1029190 AT4G27710.1 22.481 516 346 14 6 487 15 510 1.33e-15 79.7
Msa1029190 AT1G65340.1 28.729 181 120 5 301 477 308 483 1.36e-15 79.7
Msa1029190 AT1G13090.1 26.768 198 142 2 33 229 27 222 1.80e-15 77.4
Msa1029190 AT5G52320.2 24.845 322 206 13 175 475 174 480 2.54e-15 79.0
Msa1029190 AT5G52320.1 24.845 322 206 13 175 475 174 480 2.55e-15 79.0
Msa1029190 AT3G14610.1 25.726 241 174 4 232 470 248 485 7.02e-15 77.4
Msa1029190 AT2G26710.1 22.371 447 302 12 40 471 73 489 8.25e-15 77.4
Msa1029190 AT1G34540.1 23.144 458 303 16 37 466 30 466 1.04e-14 77.0
Msa1029190 AT1G05160.2 24.786 468 277 18 29 467 40 461 1.24e-14 76.6
Msa1029190 AT1G05160.1 24.786 468 277 18 29 467 40 461 1.24e-14 76.6
Msa1029190 AT5G45340.1 23.108 489 317 20 1 475 1 444 1.62e-14 76.3
Msa1029190 AT1G69500.1 22.265 521 324 17 5 470 2 496 2.17e-14 75.9
Msa1029190 AT5G58860.1 25.506 247 163 6 265 497 264 503 2.33e-14 75.9
Msa1029190 AT4G19230.2 23.701 481 295 18 8 468 6 434 2.57e-14 75.9
Msa1029190 AT1G13140.2 23.464 358 229 12 126 466 138 467 3.02e-14 75.5
Msa1029190 AT3G50660.1 24.086 465 313 14 34 472 39 489 6.84e-14 74.3
Msa1029190 AT5G24900.2 29.586 169 116 3 303 470 217 383 8.18e-14 73.6
Msa1029190 AT3G19270.1 26.022 269 181 9 210 470 182 440 9.27e-14 73.9
Msa1029190 AT5G23190.1 19.700 467 322 15 50 477 68 520 1.10e-13 73.9
Msa1029190 AT4G32170.1 22.343 367 262 10 126 476 123 482 1.26e-13 73.6
Msa1029190 AT5G24900.1 29.586 169 116 3 303 470 334 500 1.44e-13 73.6
Msa1029190 AT3G01900.1 23.160 462 303 16 29 467 28 460 7.19e-13 71.2
Msa1029190 AT2G21910.1 26.432 227 161 5 257 477 260 486 7.70e-13 71.2
Msa1029190 AT1G55940.2 22.245 490 322 18 5 472 17 469 9.81e-13 70.9
Msa1029190 AT2G26170.1 24.885 217 157 5 254 466 274 488 1.48e-12 70.5
Msa1029190 AT2G45970.1 28.796 191 122 3 301 477 300 490 1.54e-12 70.1
Msa1029190 AT2G32440.2 22.101 457 291 17 34 467 44 458 2.23e-12 69.7
Msa1029190 AT2G32440.1 22.101 457 291 17 34 467 44 458 2.23e-12 69.7
Msa1029190 AT5G24910.1 28.902 173 114 4 302 470 338 505 2.23e-12 69.7
Msa1029190 AT5G05690.1 26.842 190 132 4 291 476 263 449 2.99e-12 69.3
Msa1029190 AT4G20235.1 31.061 132 73 3 341 468 211 328 1.04e-11 66.6
Msa1029190 AT1G58265.1 35.644 101 58 3 390 483 9 109 1.08e-11 63.5
Msa1029190 AT1G67110.1 29.861 144 96 3 333 475 349 488 8.84e-11 64.7

Find 111 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGCATTTATTATTTATT+TGG 0.055658 7_1:+62497436 Msa1029190:three_prime_UTR
CTTTCAGGCATGAACATATT+TGG 0.126014 7_1:-62496841 None:intergenic
AAGAGTTTGGAAACATTATT+TGG 0.148742 7_1:+62495810 Msa1029190:CDS
TGAGATGTTGCATCTGTTTC+TGG 0.159699 7_1:+62496081 Msa1029190:CDS
ACAAAAGTTGCAAGAATTAA+TGG 0.170134 7_1:+62495652 Msa1029190:CDS
AGGACTTGTTTGGCTAGTTT+TGG 0.195421 7_1:-62495449 None:intergenic
GGAGTTTGACATTAATTATA+AGG 0.226701 7_1:+62496870 Msa1029190:CDS
ATGAATATGGAAGAGCAATT+TGG 0.227590 7_1:+62497039 Msa1029190:CDS
ACATAAATTCTTCATGTAAT+TGG 0.239465 7_1:-62495924 None:intergenic
TCTTATATATGTAAACTAAA+AGG 0.240015 7_1:+62495162 Msa1029190:five_prime_UTR
CACTTTGTTCTCTATAGATT+TGG 0.255206 7_1:+62495760 Msa1029190:CDS
TGGTTTAATTACTTGTTTGT+AGG 0.258972 7_1:-62497485 None:intergenic
GGATAGAAATCTGAAATATT+AGG 0.259972 7_1:-62495857 None:intergenic
ATGGATTATGTGAAAGAAAA+AGG 0.263642 7_1:+62495671 Msa1029190:CDS
GATGAAATTGTGAACATATT+AGG 0.267744 7_1:+62496742 Msa1029190:CDS
GTAATTAAACCAAGAGTCTT+TGG 0.276047 7_1:+62497496 Msa1029190:three_prime_UTR
ATTGCATTTATTATTTATTT+GGG 0.288215 7_1:+62497437 Msa1029190:three_prime_UTR
CTTCTCAATAACTACAATAT+TGG 0.289160 7_1:+62496031 Msa1029190:CDS
TATTAGGATCTATTTGTTGC+TGG 0.301174 7_1:-62497391 None:intergenic
GATGAAAAGTCTAAAGAGTT+TGG 0.313340 7_1:+62495797 Msa1029190:CDS
ACAAAACTCTCAAACATCTA+TGG 0.317360 7_1:+62495374 Msa1029190:CDS
TCCATTCAAAGTTGCGTAGA+AGG 0.327684 7_1:-62496987 None:intergenic
AAGTGTTTGAGATTGAATTA+AGG 0.330225 7_1:-62495742 None:intergenic
CCTATGATGGGAAGTGGCTT+TGG 0.333426 7_1:-62495311 None:intergenic
CAGGATTGCCATTGGCTCAT+AGG 0.335339 7_1:+62496941 Msa1029190:CDS
CCCTTCTACGCAACTTTGAA+TGG 0.341574 7_1:+62496986 Msa1029190:CDS
TTCTAAGATGTTTCCTATGA+TGG 0.351202 7_1:-62495324 None:intergenic
CACAATTTCATCACATTTGT+GGG 0.356238 7_1:-62496731 None:intergenic
TGTTAGGATTTATTTGTTGC+CGG 0.358322 7_1:+62496502 Msa1029190:intron
AGGTTTGTTTAGACAATTCT+TGG 0.361531 7_1:-62497465 None:intergenic
TTGTTCTATTAGAGAAGATT+TGG 0.367014 7_1:-62495484 None:intergenic
AGAGTTTGGAAACATTATTT+GGG 0.373757 7_1:+62495811 Msa1029190:CDS
TGAATATGGAAGAGCAATTT+GGG 0.375572 7_1:+62497040 Msa1029190:CDS
CCTTGATGATGTGTCAATTC+CGG 0.381920 7_1:-62496521 None:intergenic
AAGGACGATTGAGTGGATTA+TGG 0.395379 7_1:+62496540 Msa1029190:CDS
CTATGAGCCAATGGCAATCC+TGG 0.397888 7_1:-62496940 None:intergenic
CCAAAGCCACTTCCCATCAT+AGG 0.398216 7_1:+62495311 Msa1029190:CDS
AAAGCTAGAAGACATGAATA+TGG 0.398898 7_1:+62497026 Msa1029190:CDS
ATTACAAACCTCATCAGCTT+TGG 0.406492 7_1:-62495993 None:intergenic
TGGGAAGAGACCCAACCGTT+TGG 0.407099 7_1:+62496812 Msa1029190:CDS
GAGTTTGACATTAATTATAA+GGG 0.415553 7_1:+62496871 Msa1029190:CDS
GGATCGAAGGGACGAAGAAT+TGG 0.417332 7_1:-62495878 None:intergenic
CGCAACTTTGAATGGACACT+TGG 0.428234 7_1:+62496994 Msa1029190:CDS
TGTGGCATATCCATGTAAAA+TGG 0.431843 7_1:+62497603 Msa1029190:three_prime_UTR
CATATATAAGAAAAGAAAAT+CGG 0.433443 7_1:-62495150 None:intergenic
GTTTCTTCCACGGTGTTGAC+AGG 0.434934 7_1:-62495562 None:intergenic
GGGAAGAGACCCAACCGTTT+GGG 0.435226 7_1:+62496813 Msa1029190:CDS
ATGGGAAGTGGCTTTGGCCC+TGG 0.440845 7_1:-62495305 None:intergenic
AAACATTATTTGGGGTATCA+TGG 0.441591 7_1:+62495820 Msa1029190:CDS
CAACTTCAAGCACGATTGAA+TGG 0.443370 7_1:-62497360 None:intergenic
TCACAATTTCATCACATTTG+TGG 0.447884 7_1:-62496732 None:intergenic
AGGATTGCCATTGGCTCATA+GGG 0.449542 7_1:+62496942 Msa1029190:CDS
ATTAGGATCTATTTGTTGCT+GGG 0.449930 7_1:-62497390 None:intergenic
ATCTTTGCCTGCACACCTTG+TGG 0.451753 7_1:-62495899 None:intergenic
AGTTTGAATTCAAATTCAAA+AGG 0.459012 7_1:+62497561 Msa1029190:three_prime_UTR
AAAGAGTTATGTGAAGCAAT+TGG 0.466964 7_1:+62496604 Msa1029190:CDS
TTAAACCAAGAGTCTTTGGC+TGG 0.478180 7_1:+62497500 Msa1029190:three_prime_UTR
TCATTCCAGCCAAAGACTCT+TGG 0.481612 7_1:-62497505 None:intergenic
TCATATTGCTAGGGTTACAT+AGG 0.485458 7_1:+62497323 Msa1029190:intron
ATTAGTCAATGTGTGGGCCA+TGG 0.490293 7_1:+62496792 Msa1029190:CDS
GAACTTATTCCCTTTGGGGC+AGG 0.499593 7_1:+62496904 Msa1029190:CDS
CTTCGATCCACAAGGTGTGC+AGG 0.500938 7_1:+62495892 Msa1029190:CDS
ATCATAAATTCTCAATGGTA+TGG 0.502007 7_1:+62495534 Msa1029190:CDS
CCAATCATGACCCTAAAACT+AGG 0.505572 7_1:+62495398 Msa1029190:CDS
AACGGTTGGGTCTCTTCCCA+TGG 0.509255 7_1:-62496809 None:intergenic
TCTAAGATGTTTCCTATGAT+GGG 0.511254 7_1:-62495323 None:intergenic
ATGTTTCCTATGATGGGAAG+TGG 0.514559 7_1:-62495317 None:intergenic
TAGGGTTGTGCATTTGATTG+TGG 0.524449 7_1:+62496960 Msa1029190:CDS
AAGCACGATTGAATGGATCA+TGG 0.525940 7_1:-62497353 None:intergenic
TTAGTCAATGTGTGGGCCAT+GGG 0.527998 7_1:+62496793 Msa1029190:CDS
GTTTGAATTCAAATTCAAAA+GGG 0.530891 7_1:+62497562 Msa1029190:three_prime_UTR
TTTCTTCCACGGTGTTGACA+GGG 0.533460 7_1:-62495561 None:intergenic
TTTGAATGGACACTTGGTGA+TGG 0.536826 7_1:+62497000 Msa1029190:CDS
CACAAATATTAGTCAATGTG+TGG 0.538325 7_1:+62496785 Msa1029190:CDS
CAACACCGTGGAAGAAACTT+AGG 0.541547 7_1:+62495567 Msa1029190:CDS
CTGCACACCTTGTGGATCGA+AGG 0.542061 7_1:-62495891 None:intergenic
GGAAGTGGCTTTGGCCCTGG+TGG 0.543838 7_1:-62495302 None:intergenic
CATCATCAAGGACGATTGAG+TGG 0.545992 7_1:+62496533 Msa1029190:CDS
ATAGGAAACATCTTAGAACT+TGG 0.546652 7_1:+62495329 Msa1029190:CDS
AATTTGTCCAGGATTGCCAT+TGG 0.548406 7_1:+62496933 Msa1029190:CDS
TGAGCATCATAAATTCTCAA+TGG 0.551225 7_1:+62495529 Msa1029190:CDS
AAGAGCTTCCAAAGCTGATG+AGG 0.551873 7_1:+62495985 Msa1029190:CDS
AATTTGGGTTGACATTAAAG+AGG 0.554686 7_1:+62497055 Msa1029190:CDS
TCACTACAAACATGATATTG+TGG 0.561597 7_1:+62497162 Msa1029190:three_prime_UTR
TGGGGTATCATGGAAGAAGC+TGG 0.569364 7_1:+62495830 Msa1029190:CDS
GCAGGCAAAAGAATTTGTCC+AGG 0.572738 7_1:+62496922 Msa1029190:CDS
TAGCTTGAACTCGAAGAGGT+TGG 0.573885 7_1:-62497080 None:intergenic
GAGAATGCTTGCACACAAAG+AGG 0.576752 7_1:-62495231 None:intergenic
ATTTGGGTTGACATTAAAGA+GGG 0.578037 7_1:+62497056 Msa1029190:CDS
TGCACACCTTGTGGATCGAA+GGG 0.578921 7_1:-62495890 None:intergenic
AAGGCAAACACAGTTAGTCA+TGG 0.579786 7_1:+62495181 Msa1029190:exon
GGATGAAATAGCTACAAAGC+TGG 0.579972 7_1:-62497108 None:intergenic
CCATTCAAAGTTGCGTAGAA+GGG 0.581407 7_1:-62496986 None:intergenic
AGCACGATTGAATGGATCAT+GGG 0.584683 7_1:-62497352 None:intergenic
TGCACAACCCTATGAGCCAA+TGG 0.593958 7_1:-62496949 None:intergenic
TAACAACGTTAAAACTGTTG+TGG 0.604136 7_1:+62497585 Msa1029190:three_prime_UTR
CGGTTGTGAAGGAAACTCTA+CGG 0.607171 7_1:+62496680 Msa1029190:CDS
ACAAATATTAGTCAATGTGT+GGG 0.617427 7_1:+62496786 Msa1029190:CDS
TCAGTTGCATAACTAGCATG+TGG 0.621891 7_1:-62495509 None:intergenic
CTTCGTCCCTTCGATCCACA+AGG 0.627131 7_1:+62495884 Msa1029190:CDS
GAGTTTGGAAACATTATTTG+GGG 0.631466 7_1:+62495812 Msa1029190:CDS
ACAATTTCATCACATTTGTG+GGG 0.636020 7_1:-62496730 None:intergenic
ACTCTCCTAAGTTTCTTCCA+CGG 0.638651 7_1:-62495572 None:intergenic
AATTCTACAAAACTTCCACC+AGG 0.640538 7_1:+62495287 Msa1029190:CDS
CCGGAATTGACACATCATCA+AGG 0.640757 7_1:+62496521 Msa1029190:CDS
CAGTTGCATAACTAGCATGT+GGG 0.649336 7_1:-62495508 None:intergenic
GAAATAGCTTGAACTCGAAG+AGG 0.650311 7_1:-62497084 None:intergenic
TTCTTCCACGGTGTTGACAG+GGG 0.653740 7_1:-62495560 None:intergenic
CAATATTGGAGAAACTACAT+CGG 0.662749 7_1:+62496045 Msa1029190:CDS
GGCTTCCCCTGTCAACACCG+TGG 0.682218 7_1:+62495555 Msa1029190:CDS
ATTCTACAAAACTTCCACCA+GGG 0.728357 7_1:+62495288 Msa1029190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAGTAATTAATCAT+TGG - chr7_1:62496121-62496140 None:intergenic 10.0%
!! AATTGCATTTATTATTTATT+TGG + chr7_1:62497436-62497455 Msa1029190:three_prime_UTR 10.0%
!! ATTGCATTTATTATTTATTT+GGG + chr7_1:62497437-62497456 Msa1029190:three_prime_UTR 10.0%
!! CATATATAAGAAAAGAAAAT+CGG - chr7_1:62495153-62495172 None:intergenic 15.0%
!! TCTTATATATGTAAACTAAA+AGG + chr7_1:62495162-62495181 Msa1029190:five_prime_UTR 15.0%
!!! AATTTATGTGATATTTTTGA+TGG + chr7_1:62495938-62495957 Msa1029190:CDS 15.0%
!! ATTTAATTGAATTTGGAAAT+TGG + chr7_1:62496474-62496493 Msa1029190:intron 15.0%
!! ACATAAATTCTTCATGTAAT+TGG - chr7_1:62495927-62495946 None:intergenic 20.0%
!! TTATCTCTTAACGTTTAAAT+AGG - chr7_1:62496275-62496294 None:intergenic 20.0%
!! ATTCAATTAAATTTGTCCTA+CGG - chr7_1:62496466-62496485 None:intergenic 20.0%
!! AGGACAAATTTAATTGAATT+TGG + chr7_1:62496467-62496486 Msa1029190:intron 20.0%
!! GAGTTTGACATTAATTATAA+GGG + chr7_1:62496871-62496890 Msa1029190:CDS 20.0%
!! GAAATAATTGACGAAATAAT+TGG - chr7_1:62497262-62497281 None:intergenic 20.0%
!! AAAGAATTATGTAAAGCAAT+TGG - chr7_1:62497292-62497311 None:intergenic 20.0%
!!! TCCTAATAAAACATCATTTT+TGG + chr7_1:62497406-62497425 Msa1029190:three_prime_UTR 20.0%
!!! TCCAAAAATGATGTTTTATT+AGG - chr7_1:62497410-62497429 None:intergenic 20.0%
!! AGTTTGAATTCAAATTCAAA+AGG + chr7_1:62497561-62497580 Msa1029190:three_prime_UTR 20.0%
!! GTTTGAATTCAAATTCAAAA+GGG + chr7_1:62497562-62497581 Msa1029190:three_prime_UTR 20.0%
!!! TAATGTATAACCATTTTACA+TGG - chr7_1:62497616-62497635 None:intergenic 20.0%
!!! GTTTTGTAGAATTTTGAGTT+TGG - chr7_1:62495280-62495299 None:intergenic 25.0%
!!! TGTTATTGTTCCTAGTTTTA+GGG - chr7_1:62495411-62495430 None:intergenic 25.0%
!!! TTGTTATTGTTCCTAGTTTT+AGG - chr7_1:62495412-62495431 None:intergenic 25.0%
!!! AGATTTGGTAATTTTCTTGA+AGG - chr7_1:62495472-62495491 None:intergenic 25.0%
! TTGTTCTATTAGAGAAGATT+TGG - chr7_1:62495487-62495506 None:intergenic 25.0%
! ATCATAAATTCTCAATGGTA+TGG + chr7_1:62495534-62495553 Msa1029190:CDS 25.0%
!! TTTGTTGAATCAAGCATTTT+TGG - chr7_1:62495620-62495639 None:intergenic 25.0%
!! TTAATTCTTGCAACTTTTGT+TGG - chr7_1:62495652-62495671 None:intergenic 25.0%
! ACAAAAGTTGCAAGAATTAA+TGG + chr7_1:62495652-62495671 Msa1029190:CDS 25.0%
!! ATGGATTATGTGAAAGAAAA+AGG + chr7_1:62495671-62495690 Msa1029190:CDS 25.0%
!! AAAGGTGAAGTTTTTGATAT+TGG + chr7_1:62495698-62495717 Msa1029190:CDS 25.0%
!! AAGTGTTTGAGATTGAATTA+AGG - chr7_1:62495745-62495764 None:intergenic 25.0%
! AAGAGTTTGGAAACATTATT+TGG + chr7_1:62495810-62495829 Msa1029190:CDS 25.0%
! AGAGTTTGGAAACATTATTT+GGG + chr7_1:62495811-62495830 Msa1029190:CDS 25.0%
!! GGATAGAAATCTGAAATATT+AGG - chr7_1:62495860-62495879 None:intergenic 25.0%
! CTTCTCAATAACTACAATAT+TGG + chr7_1:62496031-62496050 Msa1029190:CDS 25.0%
!!! CCAATTTTTTTGTTTGTCTA+GGG - chr7_1:62496316-62496335 None:intergenic 25.0%
!!! ACCAATTTTTTTGTTTGTCT+AGG - chr7_1:62496317-62496336 None:intergenic 25.0%
! GATGAAATTGTGAACATATT+AGG + chr7_1:62496742-62496761 Msa1029190:CDS 25.0%
!! ACTAATATTTGTGCACTTTT+TGG - chr7_1:62496778-62496797 None:intergenic 25.0%
! ACAAATATTAGTCAATGTGT+GGG + chr7_1:62496786-62496805 Msa1029190:CDS 25.0%
! GGAGTTTGACATTAATTATA+AGG + chr7_1:62496870-62496889 Msa1029190:CDS 25.0%
!! AATTTTGAACTTATTCCCTT+TGG + chr7_1:62496898-62496917 Msa1029190:CDS 25.0%
!! ATTTTGAACTTATTCCCTTT+GGG + chr7_1:62496899-62496918 Msa1029190:CDS 25.0%
!! GATAATGCAATTTTTCTAAC+AGG - chr7_1:62497132-62497151 None:intergenic 25.0%
! TGGTTTAATTACTTGTTTGT+AGG - chr7_1:62497488-62497507 None:intergenic 25.0%
! TCTAAGATGTTTCCTATGAT+GGG - chr7_1:62495326-62495345 None:intergenic 30.0%
!! TTCTAAGATGTTTCCTATGA+TGG - chr7_1:62495327-62495346 None:intergenic 30.0%
ATAGGAAACATCTTAGAACT+TGG + chr7_1:62495329-62495348 Msa1029190:CDS 30.0%
ACAAAACTCTCAAACATCTA+TGG + chr7_1:62495374-62495393 Msa1029190:CDS 30.0%
!! ATTTTCTTGAAGGACTTGTT+TGG - chr7_1:62495462-62495481 None:intergenic 30.0%
TGAGCATCATAAATTCTCAA+TGG + chr7_1:62495529-62495548 Msa1029190:CDS 30.0%
! TGAAGTTTTTGATATTGGTG+AGG + chr7_1:62495703-62495722 Msa1029190:CDS 30.0%
CACTTTGTTCTCTATAGATT+TGG + chr7_1:62495760-62495779 Msa1029190:CDS 30.0%
GATGAAAAGTCTAAAGAGTT+TGG + chr7_1:62495797-62495816 Msa1029190:CDS 30.0%
GAGTTTGGAAACATTATTTG+GGG + chr7_1:62495812-62495831 Msa1029190:CDS 30.0%
! AAACATTATTTGGGGTATCA+TGG + chr7_1:62495820-62495839 Msa1029190:CDS 30.0%
CAATATTGGAGAAACTACAT+CGG + chr7_1:62496045-62496064 Msa1029190:CDS 30.0%
AAGCGACGTATAATTTAGAA+CGG - chr7_1:62496185-62496204 None:intergenic 30.0%
CCCTAGACAAACAAAAAAAT+TGG + chr7_1:62496313-62496332 Msa1029190:intron 30.0%
!! TTGGAAATTGGTGTTTTGTT+AGG + chr7_1:62496486-62496505 Msa1029190:intron 30.0%
! TGTTAGGATTTATTTGTTGC+CGG + chr7_1:62496502-62496521 Msa1029190:intron 30.0%
AAAGAGTTATGTGAAGCAAT+TGG + chr7_1:62496604-62496623 Msa1029190:CDS 30.0%
!!! TAAGTTGCCTTTTTTACAAG+CGG + chr7_1:62496660-62496679 Msa1029190:CDS 30.0%
ACAATTTCATCACATTTGTG+GGG - chr7_1:62496733-62496752 None:intergenic 30.0%
CACAATTTCATCACATTTGT+GGG - chr7_1:62496734-62496753 None:intergenic 30.0%
TCACAATTTCATCACATTTG+TGG - chr7_1:62496735-62496754 None:intergenic 30.0%
CACAAATATTAGTCAATGTG+TGG + chr7_1:62496785-62496804 Msa1029190:CDS 30.0%
! CATATTTGGATTTTCCCAAA+CGG - chr7_1:62496830-62496849 None:intergenic 30.0%
TCAAACTCCAAAAATCTTTC+AGG - chr7_1:62496859-62496878 None:intergenic 30.0%
! TTTTGAACTTATTCCCTTTG+GGG + chr7_1:62496900-62496919 Msa1029190:CDS 30.0%
AAAGCTAGAAGACATGAATA+TGG + chr7_1:62497026-62497045 Msa1029190:CDS 30.0%
ATGAATATGGAAGAGCAATT+TGG + chr7_1:62497039-62497058 Msa1029190:CDS 30.0%
TGAATATGGAAGAGCAATTT+GGG + chr7_1:62497040-62497059 Msa1029190:CDS 30.0%
!! AATTTGGGTTGACATTAAAG+AGG + chr7_1:62497055-62497074 Msa1029190:CDS 30.0%
!! ATTTGGGTTGACATTAAAGA+GGG + chr7_1:62497056-62497075 Msa1029190:CDS 30.0%
TCACTACAAACATGATATTG+TGG + chr7_1:62497162-62497181 Msa1029190:three_prime_UTR 30.0%
! ATTAGGATCTATTTGTTGCT+GGG - chr7_1:62497393-62497412 None:intergenic 30.0%
! TATTAGGATCTATTTGTTGC+TGG - chr7_1:62497394-62497413 None:intergenic 30.0%
! AGGTTTGTTTAGACAATTCT+TGG - chr7_1:62497468-62497487 None:intergenic 30.0%
GTAATTAAACCAAGAGTCTT+TGG + chr7_1:62497496-62497515 Msa1029190:three_prime_UTR 30.0%
TAACAACGTTAAAACTGTTG+TGG + chr7_1:62497585-62497604 Msa1029190:three_prime_UTR 30.0%
AATTCTACAAAACTTCCACC+AGG + chr7_1:62495287-62495306 Msa1029190:CDS 35.0%
ATTCTACAAAACTTCCACCA+GGG + chr7_1:62495288-62495307 Msa1029190:CDS 35.0%
GTGAAAGAAAAAGGCAACAA+AGG + chr7_1:62495680-62495699 Msa1029190:CDS 35.0%
ATTACAAACCTCATCAGCTT+TGG - chr7_1:62495996-62496015 None:intergenic 35.0%
! GACGTATAATTTAGAACGGA+TGG - chr7_1:62496181-62496200 None:intergenic 35.0%
! GTTCTAAATTATACGTCGCT+TGG + chr7_1:62496184-62496203 Msa1029190:intron 35.0%
TTCACAACCGCTTGTAAAAA+AGG - chr7_1:62496670-62496689 None:intergenic 35.0%
!!! TTTTTTACAAGCGGTTGTGA+AGG + chr7_1:62496669-62496688 Msa1029190:CDS 35.0%
CATTTGTGGGGTAACAAAAA+TGG - chr7_1:62496721-62496740 None:intergenic 35.0%
CTTTCAGGCATGAACATATT+TGG - chr7_1:62496844-62496863 None:intergenic 35.0%
! GTTCATGCCTGAAAGATTTT+TGG + chr7_1:62496849-62496868 Msa1029190:CDS 35.0%
TGCAGACAATTATTGCAGTT+AGG + chr7_1:62497190-62497209 Msa1029190:intron 35.0%
TTGCCTTTGTCATATTGCTA+GGG + chr7_1:62497314-62497333 Msa1029190:intron 35.0%
TAACCCTAGCAATATGACAA+AGG - chr7_1:62497320-62497339 None:intergenic 35.0%
TCATATTGCTAGGGTTACAT+AGG + chr7_1:62497323-62497342 Msa1029190:intron 35.0%
TGTGGCATATCCATGTAAAA+TGG + chr7_1:62497603-62497622 Msa1029190:three_prime_UTR 35.0%
AAGGCAAACACAGTTAGTCA+TGG + chr7_1:62495181-62495200 Msa1029190:exon 40.0%
! ATGTTTCCTATGATGGGAAG+TGG - chr7_1:62495320-62495339 None:intergenic 40.0%
!! AGTTTTGTGAGTGTCTTGTG+TGG - chr7_1:62495362-62495381 None:intergenic 40.0%
!!! CCTAGTTTTAGGGTCATGAT+TGG - chr7_1:62495401-62495420 None:intergenic 40.0%
CCAATCATGACCCTAAAACT+AGG + chr7_1:62495398-62495417 Msa1029190:CDS 40.0%
!!! GACTTGTTTGGCTAGTTTTG+GGG - chr7_1:62495450-62495469 None:intergenic 40.0%
!!! GGACTTGTTTGGCTAGTTTT+GGG - chr7_1:62495451-62495470 None:intergenic 40.0%
!!! AGGACTTGTTTGGCTAGTTT+TGG - chr7_1:62495452-62495471 None:intergenic 40.0%
CAGTTGCATAACTAGCATGT+GGG - chr7_1:62495511-62495530 None:intergenic 40.0%
TCAGTTGCATAACTAGCATG+TGG - chr7_1:62495512-62495531 None:intergenic 40.0%
ACTCTCCTAAGTTTCTTCCA+CGG - chr7_1:62495575-62495594 None:intergenic 40.0%
TGAGATGTTGCATCTGTTTC+TGG + chr7_1:62496081-62496100 Msa1029190:CDS 40.0%
!! CATCTGTTTCTGGTTAGTGT+TGG + chr7_1:62496091-62496110 Msa1029190:intron 40.0%
!! CCTTGATGATGTGTCAATTC+CGG - chr7_1:62496524-62496543 None:intergenic 40.0%
!! AAGGACGATTGAGTGGATTA+TGG + chr7_1:62496540-62496559 Msa1029190:CDS 40.0%
! TTGGATTTTCCCAAACGGTT+GGG - chr7_1:62496825-62496844 None:intergenic 40.0%
! TTTGGATTTTCCCAAACGGT+TGG - chr7_1:62496826-62496845 None:intergenic 40.0%
AATTTGTCCAGGATTGCCAT+TGG + chr7_1:62496933-62496952 Msa1029190:CDS 40.0%
TAGGGTTGTGCATTTGATTG+TGG + chr7_1:62496960-62496979 Msa1029190:CDS 40.0%
CCATTCAAAGTTGCGTAGAA+GGG - chr7_1:62496989-62497008 None:intergenic 40.0%
TCCATTCAAAGTTGCGTAGA+AGG - chr7_1:62496990-62497009 None:intergenic 40.0%
! TTTGAATGGACACTTGGTGA+TGG + chr7_1:62497000-62497019 Msa1029190:CDS 40.0%
GAAATAGCTTGAACTCGAAG+AGG - chr7_1:62497087-62497106 None:intergenic 40.0%
GGATGAAATAGCTACAAAGC+TGG - chr7_1:62497111-62497130 None:intergenic 40.0%
CTTGCCTTTGTCATATTGCT+AGG + chr7_1:62497313-62497332 Msa1029190:intron 40.0%
AGCACGATTGAATGGATCAT+GGG - chr7_1:62497355-62497374 None:intergenic 40.0%
AAGCACGATTGAATGGATCA+TGG - chr7_1:62497356-62497375 None:intergenic 40.0%
CAACTTCAAGCACGATTGAA+TGG - chr7_1:62497363-62497382 None:intergenic 40.0%
TTAAACCAAGAGTCTTTGGC+TGG + chr7_1:62497500-62497519 Msa1029190:three_prime_UTR 40.0%
GAGAATGCTTGCACACAAAG+AGG - chr7_1:62495234-62495253 None:intergenic 45.0%
!! TTTCTTCCACGGTGTTGACA+GGG - chr7_1:62495564-62495583 None:intergenic 45.0%
CAACACCGTGGAAGAAACTT+AGG + chr7_1:62495567-62495586 Msa1029190:CDS 45.0%
AAGAGCTTCCAAAGCTGATG+AGG + chr7_1:62495985-62496004 Msa1029190:CDS 45.0%
TACGGTATTAGCACAAGGTG+AGG - chr7_1:62496448-62496467 None:intergenic 45.0%
TCACCTTGTGCTAATACCGT+AGG + chr7_1:62496447-62496466 Msa1029190:intron 45.0%
TGTCCTACGGTATTAGCACA+AGG - chr7_1:62496453-62496472 None:intergenic 45.0%
CCGGAATTGACACATCATCA+AGG + chr7_1:62496521-62496540 Msa1029190:CDS 45.0%
CATCATCAAGGACGATTGAG+TGG + chr7_1:62496533-62496552 Msa1029190:CDS 45.0%
CGGTTGTGAAGGAAACTCTA+CGG + chr7_1:62496680-62496699 Msa1029190:CDS 45.0%
GGTAACAAAAATGGAGCTGG+TGG - chr7_1:62496712-62496731 None:intergenic 45.0%
TGGGGTAACAAAAATGGAGC+TGG - chr7_1:62496715-62496734 None:intergenic 45.0%
ATTAGTCAATGTGTGGGCCA+TGG + chr7_1:62496792-62496811 Msa1029190:CDS 45.0%
TTAGTCAATGTGTGGGCCAT+GGG + chr7_1:62496793-62496812 Msa1029190:CDS 45.0%
! ATTCTTTTGCCTGCCCCAAA+GGG - chr7_1:62496916-62496935 None:intergenic 45.0%
! AATTCTTTTGCCTGCCCCAA+AGG - chr7_1:62496917-62496936 None:intergenic 45.0%
GCAGGCAAAAGAATTTGTCC+AGG + chr7_1:62496922-62496941 Msa1029190:CDS 45.0%
!! AGGATTGCCATTGGCTCATA+GGG + chr7_1:62496942-62496961 Msa1029190:CDS 45.0%
CCCTTCTACGCAACTTTGAA+TGG + chr7_1:62496986-62497005 Msa1029190:CDS 45.0%
CGCAACTTTGAATGGACACT+TGG + chr7_1:62496994-62497013 Msa1029190:CDS 45.0%
TAGCTTGAACTCGAAGAGGT+TGG - chr7_1:62497083-62497102 None:intergenic 45.0%
TCATTCCAGCCAAAGACTCT+TGG - chr7_1:62497508-62497527 None:intergenic 45.0%
!! AAAATAAATAAATTAATCAT+TGG - chr7_1:62496145-62496164 None:intergenic 5.0%
! CCTATGATGGGAAGTGGCTT+TGG - chr7_1:62495314-62495333 None:intergenic 50.0%
CCAAAGCCACTTCCCATCAT+AGG + chr7_1:62495311-62495330 Msa1029190:CDS 50.0%
!! TTCTTCCACGGTGTTGACAG+GGG - chr7_1:62495563-62495582 None:intergenic 50.0%
!! GTTTCTTCCACGGTGTTGAC+AGG - chr7_1:62495565-62495584 None:intergenic 50.0%
! TGGGGTATCATGGAAGAAGC+TGG + chr7_1:62495830-62495849 Msa1029190:CDS 50.0%
GGATCGAAGGGACGAAGAAT+TGG - chr7_1:62495881-62495900 None:intergenic 50.0%
TGCACACCTTGTGGATCGAA+GGG - chr7_1:62495893-62495912 None:intergenic 50.0%
ATCTTTGCCTGCACACCTTG+TGG - chr7_1:62495902-62495921 None:intergenic 50.0%
!! GAACTTATTCCCTTTGGGGC+AGG + chr7_1:62496904-62496923 Msa1029190:CDS 50.0%
CTATGAGCCAATGGCAATCC+TGG - chr7_1:62496943-62496962 None:intergenic 50.0%
!! CAGGATTGCCATTGGCTCAT+AGG + chr7_1:62496941-62496960 Msa1029190:CDS 50.0%
TGCACAACCCTATGAGCCAA+TGG - chr7_1:62496952-62496971 None:intergenic 50.0%
CTTCGTCCCTTCGATCCACA+AGG + chr7_1:62495884-62495903 Msa1029190:CDS 55.0%
CTGCACACCTTGTGGATCGA+AGG - chr7_1:62495894-62495913 None:intergenic 55.0%
CTTCGATCCACAAGGTGTGC+AGG + chr7_1:62495892-62495911 Msa1029190:CDS 55.0%
AACGGTTGGGTCTCTTCCCA+TGG - chr7_1:62496812-62496831 None:intergenic 55.0%
TGGGAAGAGACCCAACCGTT+TGG + chr7_1:62496812-62496831 Msa1029190:CDS 55.0%
GGGAAGAGACCCAACCGTTT+GGG + chr7_1:62496813-62496832 Msa1029190:CDS 55.0%
!! ATGGGAAGTGGCTTTGGCCC+TGG - chr7_1:62495308-62495327 None:intergenic 60.0%
!! GGAAGTGGCTTTGGCCCTGG+TGG - chr7_1:62495305-62495324 None:intergenic 65.0%
GGCTTCCCCTGTCAACACCG+TGG + chr7_1:62495555-62495574 Msa1029190:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 62495148 62497657 62495148 ID=Msa1029190;Name=Msa1029190
chr7_1 mRNA 62495148 62497657 62495148 ID=Msa1029190-mRNA-1;Parent=Msa1029190;Name=Msa1029190-mRNA-1;_AED=0.37;_eAED=0.37;_QI=52|1|1|1|0.5|0.33|3|387|504
chr7_1 exon 62495148 62496102 62495148 ID=Msa1029190-mRNA-1:exon:13379;Parent=Msa1029190-mRNA-1
chr7_1 exon 62496508 62497183 62496508 ID=Msa1029190-mRNA-1:exon:13380;Parent=Msa1029190-mRNA-1
chr7_1 exon 62497335 62497657 62497335 ID=Msa1029190-mRNA-1:exon:13381;Parent=Msa1029190-mRNA-1
chr7_1 five_prime_UTR 62495148 62495199 62495148 ID=Msa1029190-mRNA-1:five_prime_utr;Parent=Msa1029190-mRNA-1
chr7_1 CDS 62495200 62496102 62495200 ID=Msa1029190-mRNA-1:cds;Parent=Msa1029190-mRNA-1
chr7_1 CDS 62496508 62497119 62496508 ID=Msa1029190-mRNA-1:cds;Parent=Msa1029190-mRNA-1
chr7_1 three_prime_UTR 62497120 62497183 62497120 ID=Msa1029190-mRNA-1:three_prime_utr;Parent=Msa1029190-mRNA-1
chr7_1 three_prime_UTR 62497335 62497657 62497335 ID=Msa1029190-mRNA-1:three_prime_utr;Parent=Msa1029190-mRNA-1
Gene Sequence

>Msa1029190

ATGGAATACAAAACACTTCTACTAGTGATTACCTCTTTGTGTGCAAGCATTCTCATAATCATTCTTAGAAATTTAAACCAAACTCAAAATTCTACAAAACTTCCACCAGGGCCAAAGCCACTTCCCATCATAGGAAACATCTTAGAACTTGGCAAAAATCCACACAAGACACTCACAAAACTCTCAAACATCTATGGACCAATCATGACCCTAAAACTAGGAACAATAACAACAATTGTAATCTCTTCCCCAAAACTAGCCAAACAAGTCCTTCAAGAAAATTACCAAATCTTCTCTAATAGAACAATCCCACATGCTAGTTATGCAACTGAGCATCATAAATTCTCAATGGTATGGCTTCCCCTGTCAACACCGTGGAAGAAACTTAGGAGAGTTTGCGCTACAAAAGTACTCTCTCCAAAAATGCTTGATTCAACAAAAATCATTCGCCAACAAAAGTTGCAAGAATTAATGGATTATGTGAAAGAAAAAGGCAACAAAGGTGAAGTTTTTGATATTGGTGAGGCTGTTTTTACAACTGTCCTTAATTCAATCTCAAACACTTTGTTCTCTATAGATTTGGCTCATTTAACACATGATGAAAAGTCTAAAGAGTTTGGAAACATTATTTGGGGTATCATGGAAGAAGCTGGCAAGCCTAATATTTCAGATTTCTATCCAATTCTTCGTCCCTTCGATCCACAAGGTGTGCAGGCAAAGATGACCAATTACATGAAGAATTTATGTGATATTTTTGATGGAATTATTGAAGAAAGAATTTGTTCAAGAGCTTCCAAAGCTGATGAGGTTTGTAATGATGTGTTAGATTCACTTCTCAATAACTACAATATTGGAGAAACTACATCGGAATTGAGTCGCAATGAGATGTTGCATCTGTTTCTGGATTTATTTGTTGCCGGAATTGACACATCATCAAGGACGATTGAGTGGATTATGGCAGAGCTACTATGTAACTCAGACAAATTAAAAAAAGCAAGAAAAGAGTTATGTGAAGCAATTGGTAAAGATGAAACAATTGAAGAATCACATATTTTTAAGTTGCCTTTTTTACAAGCGGTTGTGAAGGAAACTCTACGGTTGCATCCACCAGCTCCATTTTTGTTACCCCACAAATGTGATGAAATTGTGAACATATTAGGTTTCAATGTGCCAAAAAGTGCACAAATATTAGTCAATGTGTGGGCCATGGGAAGAGACCCAACCGTTTGGGAAAATCCAAATATGTTCATGCCTGAAAGATTTTTGGAGTTTGACATTAATTATAAGGGTAATAATTTTGAACTTATTCCCTTTGGGGCAGGCAAAAGAATTTGTCCAGGATTGCCATTGGCTCATAGGGTTGTGCATTTGATTGTGGCATCCCTTCTACGCAACTTTGAATGGACACTTGGTGATGGATTAAAGCTAGAAGACATGAATATGGAAGAGCAATTTGGGTTGACATTAAAGAGGGTCCAACCTCTTCGAGTTCAAGCTATTTCACCAGCTTTGTAG
Protein sequence

>Msa1029190

MEYKTLLLVITSLCASILIIILRNLNQTQNSTKLPPGPKPLPIIGNILELGKNPHKTLTKLSNIYGPIMTLKLGTITTIVISSPKLAKQVLQENYQIFSNRTIPHASYATEHHKFSMVWLPLSTPWKKLRRVCATKVLSPKMLDSTKIIRQQKLQELMDYVKEKGNKGEVFDIGEAVFTTVLNSISNTLFSIDLAHLTHDEKSKEFGNIIWGIMEEAGKPNISDFYPILRPFDPQGVQAKMTNYMKNLCDIFDGIIEERICSRASKADEVCNDVLDSLLNNYNIGETTSELSRNEMLHLFLDLFVAGIDTSSRTIEWIMAELLCNSDKLKKARKELCEAIGKDETIEESHIFKLPFLQAVVKETLRLHPPAPFLLPHKCDEIVNILGFNVPKSAQILVNVWAMGRDPTVWENPNMFMPERFLEFDINYKGNNFELIPFGAGKRICPGLPLAHRVVHLIVASLLRNFEWTLGDGLKLEDMNMEEQFGLTLKRVQPLRVQAISPAL*