AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1405190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1405190 MtrunA17_Chr4g0063291 92.098 734 58 0 1 734 1 734 0.0 1373
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 162 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAAAGGACTACGAAATT+TGG 0.185735 tig0023115:+9754 Msa1405190:three_prime_UTR
AGCTATTGGTAATCTGTTTC+AGG 0.218952 tig0023115:+7131 Msa1405190:CDS
TGAAGATAAGCATTTGAATT+TGG 0.226487 tig0023115:+7245 Msa1405190:CDS
ATCTTTCACTTGTATGTTAT+TGG 0.231088 tig0023115:-9123 None:intergenic
GATGATAGTAGTAAATTAAA+TGG 0.231494 tig0023115:+7270 Msa1405190:CDS
TTGCATAGCTTCTTCTTTAC+TGG 0.241498 tig0023115:-8105 None:intergenic
ATGTCAGAGCCCTGTATAAT+TGG 0.248707 tig0023115:+8216 Msa1405190:CDS
TCGTAGTCCTTTGAAAAGTT+TGG 0.249579 tig0023115:-9747 None:intergenic
ATCAGTTTGGTTACAATTGC+TGG 0.259140 tig0023115:+9220 Msa1405190:three_prime_UTR
TTCACAATTCAATCACAAAA+TGG 0.270122 tig0023115:+6455 Msa1405190:CDS
AACTTCTCCTTACTACTTCC+TGG 0.283873 tig0023115:-9047 None:intergenic
CGATAACGATCGTGAAAATA+AGG 0.285678 tig0023115:-6415 None:intergenic
AATTCTGAGAGAGAAAATTT+TGG 0.287099 tig0023115:+7366 Msa1405190:CDS
CAGAATCAAGCCGGCTTTCA+TGG 0.297020 tig0023115:-7530 None:intergenic
TGAGGCTGAAAGAGTATTCT+TGG 0.297065 tig0023115:+8565 Msa1405190:CDS
TAAGAATAAGAAGATTAAAA+TGG 0.299380 tig0023115:+6930 Msa1405190:CDS
CAATGGCGATTTCTAGGGTT+AGG 0.304696 tig0023115:+6665 Msa1405190:CDS
CGTAGTCCTTTGAAAAGTTT+GGG 0.313185 tig0023115:-9746 None:intergenic
CAAATATACCTGCTGGTTGC+TGG 0.314280 tig0023115:-9271 None:intergenic
AGACAACTTTAGTCAATTCA+TGG 0.317343 tig0023115:+9179 Msa1405190:exon
CAGAAGTAGCTCGAAATGTT+AGG 0.326770 tig0023115:-6495 None:intergenic
ATTCTTCTCAAGACTCGTTC+AGG 0.328932 tig0023115:+7301 Msa1405190:CDS
TTGCAGAAACAAGATATAAA+AGG 0.329609 tig0023115:-6212 None:intergenic
AGTGAGAAATTGAAGAGTTT+AGG 0.333033 tig0023115:+6844 Msa1405190:CDS
TGTAACCAAACTGATTCTTC+TGG 0.333640 tig0023115:-9212 None:intergenic
AAAACGTAGTAGAATAATTA+AGG 0.334312 tig0023115:+8064 Msa1405190:CDS
AGATTTCTTTGATACACATT+TGG 0.341845 tig0023115:+9504 Msa1405190:three_prime_UTR
GGAAACACTTATCTTCTTCA+TGG 0.347881 tig0023115:+7972 Msa1405190:CDS
TTTGTGCAATGGCGATTTCT+AGG 0.347927 tig0023115:+6659 Msa1405190:CDS
AAGCAACTGCTCACGCAAAA+AGG 0.352337 tig0023115:-7595 None:intergenic
AGATATAAAAGGCAAATAAA+AGG 0.355540 tig0023115:-6201 None:intergenic
ATACGAAGACGCCCTTGATA+TGG 0.359210 tig0023115:+9097 Msa1405190:CDS
TCTTCATACCGAGACCTATC+AGG 0.367694 tig0023115:-7669 None:intergenic
GGAAAAGTGTAATGGTGTTT+TGG 0.373094 tig0023115:+7044 Msa1405190:CDS
GCATCTACATCAACCATCTA+TGG 0.373459 tig0023115:+6517 Msa1405190:CDS
AGGCTTTAAGTCCACAGCTT+TGG 0.380971 tig0023115:-7922 None:intergenic
TTCAAATGCTTATCTTCAAC+CGG 0.388929 tig0023115:-7240 None:intergenic
AATGCAGCTATCATGAATAT+TGG 0.398818 tig0023115:+9466 Msa1405190:intron
GATTTCTTTGATACACATTT+GGG 0.404653 tig0023115:+9505 Msa1405190:three_prime_UTR
ACATTCTACAACTATTTGTA+AGG 0.404793 tig0023115:+9714 Msa1405190:three_prime_UTR
ATCAAGGCCAGGAAACATTC+AGG 0.405953 tig0023115:+7619 Msa1405190:CDS
ATTAAAATGGATGATTTGTA+TGG 0.407609 tig0023115:+6943 Msa1405190:CDS
ATGGACAGAAATGGAAGAAT+AGG 0.411172 tig0023115:+7339 Msa1405190:CDS
TACAGCAGAGATCTCGCTTA+AGG 0.412812 tig0023115:+9024 Msa1405190:CDS
TGTCAGAGCCCTGTATAATT+GGG 0.417133 tig0023115:+8217 Msa1405190:CDS
GAATGGAAGGAATTATGTTA+AGG 0.421693 tig0023115:+7005 Msa1405190:CDS
TAGAAGACCTGAATGTTTCC+TGG 0.422293 tig0023115:-7626 None:intergenic
GAAGTTGAAGTTACTTCAGC+AGG 0.427912 tig0023115:+9064 Msa1405190:CDS
AAAGAAAAGAGTATAGTTAC+CGG 0.428449 tig0023115:+7427 Msa1405190:CDS
CTCGCCAGCTCAGAAGCTTC+CGG 0.428655 tig0023115:+6553 Msa1405190:CDS
AAGAAACAAGTTGGAGAAGC+TGG 0.428878 tig0023115:+7093 Msa1405190:CDS
TATCAGATGCTGCAAGCTAT+TGG 0.430268 tig0023115:+7117 Msa1405190:CDS
TTCATCCCAACCACCATAGA+TGG 0.430929 tig0023115:-6530 None:intergenic
CGTGAGCAGTTGCTTAATCA+AGG 0.434199 tig0023115:+7603 Msa1405190:CDS
GTGCAAGGCCCCAATTATAC+AGG 0.434643 tig0023115:-8226 None:intergenic
CCATAGCATCTCTTTGAAGA+TGG 0.435236 tig0023115:+7476 Msa1405190:CDS
AGCTTTGTTCAGATGGGGTA+TGG 0.435338 tig0023115:+8998 Msa1405190:intron
TGAACCTCAATCCTTTGTTC+CGG 0.435438 tig0023115:-7446 None:intergenic
GAAGTAAAGGTGAGTGGAAG+TGG 0.438464 tig0023115:+6781 Msa1405190:CDS
GTTATCCAGAAGAATCAGTT+TGG 0.438913 tig0023115:+9207 Msa1405190:three_prime_UTR
TTTGTAAAGGGTACTTATGA+TGG 0.439273 tig0023115:+7855 Msa1405190:CDS
ATCAACCATCTATGGTGGTT+GGG 0.447897 tig0023115:+6525 Msa1405190:CDS
AGAAAATGTGGAGAGGCAAT+TGG 0.448966 tig0023115:+7188 Msa1405190:CDS
ATGATAGTAGTAAATTAAAT+GGG 0.449234 tig0023115:+7271 Msa1405190:CDS
CTTAAAGCCTATGAGTTTGT+TGG 0.455199 tig0023115:+7935 Msa1405190:CDS
ATAAAGTTGTCATCTTTGAA+TGG 0.455324 tig0023115:+6988 Msa1405190:CDS
TAGTAAATTAAATGGGAAGT+TGG 0.455875 tig0023115:+7278 Msa1405190:CDS
CCACATGTCTGTCACACTGC+TGG 0.460760 tig0023115:-7502 None:intergenic
CAAGCAAAAGAGTTTGTAAA+GGG 0.460977 tig0023115:+7843 Msa1405190:CDS
AAAGGAACAGTGGGCCTGAT+AGG 0.461163 tig0023115:+7655 Msa1405190:CDS
ATCATGAATATTGGTTATGT+TGG 0.462817 tig0023115:+9475 Msa1405190:three_prime_UTR
AGGAAACGGTGCTTTGCCTC+CGG 0.463044 tig0023115:+7221 Msa1405190:CDS
GGTAGAAGAAAGAAACAAGT+TGG 0.467933 tig0023115:+7084 Msa1405190:CDS
CCTACAGCCAACAAACTCAT+AGG 0.471224 tig0023115:-7942 None:intergenic
TATTCTTCCAGCTTCTGCTA+TGG 0.472083 tig0023115:+6702 Msa1405190:CDS
AGACTATTATATATCTGCCT+TGG 0.472964 tig0023115:+9246 Msa1405190:three_prime_UTR
CTTTCAATCTATCTCTAGGA+TGG 0.475515 tig0023115:+9559 Msa1405190:three_prime_UTR
GAATTGCAGCTTTGTTCAGA+TGG 0.476823 tig0023115:+8991 Msa1405190:intron
CTTTAGTCAATTCATGGAAA+GGG 0.483297 tig0023115:+9185 Msa1405190:exon
GGTCAATTGATAGCAGATAT+TGG 0.485601 tig0023115:+8260 Msa1405190:CDS
AATGGCGATTTCTAGGGTTA+GGG 0.489600 tig0023115:+6666 Msa1405190:CDS
CTCAGAGACACACAAGGATA+AGG 0.489613 tig0023115:-9147 None:intergenic
TTCGCAATTGGTTATAGCGT+AGG 0.489973 tig0023115:+6727 Msa1405190:CDS
ACAAACCGCAATAAGATCTC+AGG 0.491840 tig0023115:+9531 Msa1405190:three_prime_UTR
GGTATGAAGAAGATAGAGAT+AGG 0.491937 tig0023115:+7682 Msa1405190:CDS
TCGCAATTGGTTATAGCGTA+GGG 0.496989 tig0023115:+6728 Msa1405190:CDS
TTTATATCTTGTTTCTGCAA+AGG 0.499159 tig0023115:+6215 Msa1405190:five_prime_UTR
TTGTGCAATGGCGATTTCTA+GGG 0.499663 tig0023115:+6660 Msa1405190:CDS
AGTTGTCATCTTTGAATGGA+AGG 0.500075 tig0023115:+6992 Msa1405190:CDS
TTGGATCAAACTCGAGGAAA+CGG 0.500384 tig0023115:+7207 Msa1405190:CDS
AGTTACTTCAGCAGGCTAAA+CGG 0.501792 tig0023115:+9072 Msa1405190:CDS
CTTAAGGCCAGGAAGTAGTA+AGG 0.502992 tig0023115:+9040 Msa1405190:CDS
ACAAGCAAAAGAGTTTGTAA+AGG 0.503743 tig0023115:+7842 Msa1405190:CDS
TGAAGAGAGCGAAGAGCTAC+TGG 0.504995 tig0023115:+8145 Msa1405190:CDS
AGAAGTAGCTCGAAATGTTA+GGG 0.507578 tig0023115:-6494 None:intergenic
TTCTTCTCAAGACTCGTTCA+GGG 0.509514 tig0023115:+7302 Msa1405190:CDS
CATCAACCATCTATGGTGGT+TGG 0.513788 tig0023115:+6524 Msa1405190:CDS
AGAATCAAGCCGGCTTTCAT+GGG 0.514482 tig0023115:-7529 None:intergenic
TCAGGTCTTCTATCGACAAA+AGG 0.518483 tig0023115:+7637 Msa1405190:CDS
GTGGAAGTGGAAGTAGTAAG+AGG 0.519014 tig0023115:+6794 Msa1405190:CDS
CCATCTTCAAAGAGATGCTA+TGG 0.520456 tig0023115:-7476 None:intergenic
AATTGCAGCTTTGTTCAGAT+GGG 0.520765 tig0023115:+8992 Msa1405190:intron
TGTTATTGGAGTCCATATCA+AGG 0.525510 tig0023115:-9109 None:intergenic
GGGGATAATCACAGAAGTGC+TGG 0.525777 tig0023115:+7393 Msa1405190:CDS
CTTTGATGAGATTGATGTTG+TGG 0.528417 tig0023115:+6873 Msa1405190:CDS
CCTGCTGGTTGCTGGATCCA+AGG 0.529778 tig0023115:-9263 None:intergenic
TGAACTGAGAAATCTTCTCT+CGG 0.532743 tig0023115:+8019 Msa1405190:CDS
AAGTGGAAGTAGTAAGAGGA+AGG 0.532906 tig0023115:+6798 Msa1405190:CDS
CCTTGGATCCAGCAACCAGC+AGG 0.540386 tig0023115:+9263 Msa1405190:three_prime_UTR
CACCAAAGTCAGAGAAAATG+TGG 0.540825 tig0023115:+7176 Msa1405190:CDS
AAAAGGCAAATAAAAGGTTG+TGG 0.543145 tig0023115:-6195 None:intergenic
GCGAAAACCATAGCAGAAGC+TGG 0.546171 tig0023115:-6709 None:intergenic
GGTGCTTTCAATCTATCTCT+AGG 0.549272 tig0023115:+9555 Msa1405190:three_prime_UTR
GAACTGAGAAATCTTCTCTC+GGG 0.552033 tig0023115:+8020 Msa1405190:CDS
ACTTTAGTCAATTCATGGAA+AGG 0.554104 tig0023115:+9184 Msa1405190:exon
GGCCTTGCACTTTCTTTCCG+CGG 0.554567 tig0023115:+8239 Msa1405190:CDS
TAATGCTTTCAGAATCAAGC+CGG 0.555653 tig0023115:-7539 None:intergenic
TGCAGGAAGAAAGTATAGAC+TGG 0.557667 tig0023115:+8172 Msa1405190:CDS
TTGTTGGCTGTAGGACAGCT+AGG 0.559369 tig0023115:+7951 Msa1405190:CDS
ACAGTGGGCCTGATAGGTCT+CGG 0.561636 tig0023115:+7661 Msa1405190:CDS
TGTGGGAATCCCATGAAAGC+CGG 0.565558 tig0023115:+7520 Msa1405190:CDS
GTTACCGGAACAAAGGATTG+AGG 0.566473 tig0023115:+7442 Msa1405190:CDS
GAAGAGCTACTGGTAAATGC+AGG 0.567171 tig0023115:+8155 Msa1405190:CDS
CATGGGGATTGTTTGTGCAA+TGG 0.569270 tig0023115:+6648 Msa1405190:CDS
GTCATCAGCAAGTAGTTGAT+CGG 0.571856 tig0023115:-7718 None:intergenic
GATAATGAGGAAAAGTGTAA+TGG 0.573362 tig0023115:+7036 Msa1405190:CDS
ATTGATAGCAGATATTGGTC+CGG 0.577392 tig0023115:+8265 Msa1405190:CDS
CTCACCGGAAGCTTCTGAGC+TGG 0.577535 tig0023115:-6557 None:intergenic
GCAGTTGCTTAATCAAGGCC+AGG 0.578217 tig0023115:+7608 Msa1405190:CDS
GAATTGTGAAGAAGAATCGA+AGG 0.588483 tig0023115:-6442 None:intergenic
TTCGGTGAAGTAAAGGTGAG+TGG 0.589602 tig0023115:+6775 Msa1405190:CDS
CTATCGACAAAAGGAACAGT+GGG 0.594453 tig0023115:+7646 Msa1405190:CDS
GAGTATAGTTACCGGAACAA+AGG 0.597131 tig0023115:+7435 Msa1405190:CDS
CCAGCAGTGTGACAGACATG+TGG 0.599688 tig0023115:+7502 Msa1405190:CDS
TTTGATGCTATGCTGTTGAA+AGG 0.601768 tig0023115:+8602 Msa1405190:CDS
CCTATGAGTTTGTTGGCTGT+AGG 0.602332 tig0023115:+7942 Msa1405190:CDS
TAGATATCTCGCTGAAGCAA+CGG 0.605301 tig0023115:+7809 Msa1405190:CDS
GGAAATGTTTATGCACCAGA+TGG 0.610369 tig0023115:+8623 Msa1405190:CDS
GACCGCGGAAAGAAAGTGCA+AGG 0.613769 tig0023115:-8241 None:intergenic
GTCAGAGCCCTGTATAATTG+GGG 0.615040 tig0023115:+8218 Msa1405190:CDS
CAGCAGTGTGACAGACATGT+GGG 0.623893 tig0023115:+7503 Msa1405190:CDS
ATTGCAGCTTTGTTCAGATG+GGG 0.624119 tig0023115:+8993 Msa1405190:intron
GTTATTGGAGTCCATATCAA+GGG 0.629466 tig0023115:-9108 None:intergenic
TTTCAATCTATCTCTAGGAT+GGG 0.629501 tig0023115:+9560 Msa1405190:three_prime_UTR
GCGCAACGAATCAAACTCAC+CGG 0.637670 tig0023115:-6572 None:intergenic
TTGGTTGAGAATCATAAGGG+TGG 0.637819 tig0023115:+7063 Msa1405190:CDS
CACCTCCTGAGATCTTATTG+CGG 0.638273 tig0023115:-9536 None:intergenic
AAATGCTTATCTTCAACCGG+AGG 0.645592 tig0023115:-7237 None:intergenic
AACGTAACAATTCAGAACGA+AGG 0.651421 tig0023115:-6317 None:intergenic
TGCAAGGCCCCAATTATACA+GGG 0.654637 tig0023115:-8225 None:intergenic
AGGCAATTGGATCAAACTCG+AGG 0.661797 tig0023115:+7201 Msa1405190:CDS
TAAAGTCAGAATGAAACGCG+TGG 0.665756 tig0023115:+7560 Msa1405190:CDS
TCTACATCAACCATCTATGG+TGG 0.666124 tig0023115:+6520 Msa1405190:CDS
TCTATCGACAAAAGGAACAG+TGG 0.667466 tig0023115:+7645 Msa1405190:CDS
AACCGCAATAAGATCTCAGG+AGG 0.668666 tig0023115:+9534 Msa1405190:three_prime_UTR
AAGTCAGAGAAAATGTGGAG+AGG 0.676102 tig0023115:+7181 Msa1405190:CDS
AAGTTTACTCTCCAAAGCTG+TGG 0.683375 tig0023115:+7911 Msa1405190:CDS
TCAATCACAAAATGGACACG+TGG 0.686144 tig0023115:+6463 Msa1405190:CDS
AGGACACGTGTTTAACTGTG+CGG 0.716184 tig0023115:+6235 Msa1405190:five_prime_UTR
GTTAAGCTCAGAGACACACA+AGG 0.722979 tig0023115:-9153 None:intergenic
TTGCACAAACAATCCCCATG+AGG 0.735544 tig0023115:-6645 None:intergenic
TATCTGCTATCAATTGACCG+CGG 0.787018 tig0023115:-8256 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATTGAAAAGATTAAT+TGG - tig0023115:6391-6410 None:intergenic 10.0%
!! TAAGAATAAGAAGATTAAAA+TGG + tig0023115:6930-6949 Msa1405190:CDS 15.0%
!! ATGATAGTAGTAAATTAAAT+GGG + tig0023115:7271-7290 Msa1405190:CDS 15.0%
!!! TCTAAAATGATTGTATAAAT+TGG + tig0023115:8392-8411 Msa1405190:intron 15.0%
!!! ATAATTTGCAACTTATATTA+AGG - tig0023115:8889-8908 None:intergenic 15.0%
!! TAATTCTATGAAAAATCTAT+AGG - tig0023115:9348-9367 None:intergenic 15.0%
!! TTGAAAATATAAAGGAAAAA+TGG - tig0023115:9429-9448 None:intergenic 15.0%
!! TGTTAGAATTGAAAATATAA+AGG - tig0023115:9437-9456 None:intergenic 15.0%
!! AGATATAAAAGGCAAATAAA+AGG - tig0023115:6204-6223 None:intergenic 20.0%
!!! ATTAAAATGGATGATTTGTA+TGG + tig0023115:6943-6962 Msa1405190:CDS 20.0%
!! GATGATAGTAGTAAATTAAA+TGG + tig0023115:7270-7289 Msa1405190:CDS 20.0%
!! AAAACGTAGTAGAATAATTA+AGG + tig0023115:8064-8083 Msa1405190:CDS 20.0%
!! ATGTCTCTTCATATATATAT+AGG + tig0023115:8532-8551 Msa1405190:intron 20.0%
!! TGTCTCTTCATATATATATA+GGG + tig0023115:8533-8552 Msa1405190:intron 20.0%
!! TGCAAATTATCTATGTTAAA+TGG + tig0023115:8899-8918 Msa1405190:intron 20.0%
!! TAATAACACAGTGATAATAA+AGG + tig0023115:9393-9412 Msa1405190:intron 20.0%
! TTGCAGAAACAAGATATAAA+AGG - tig0023115:6215-6234 None:intergenic 25.0%
!!! TTTATATCTTGTTTCTGCAA+AGG + tig0023115:6215-6234 Msa1405190:five_prime_UTR 25.0%
! TTCACAATTCAATCACAAAA+TGG + tig0023115:6455-6474 Msa1405190:CDS 25.0%
! ATAAAGTTGTCATCTTTGAA+TGG + tig0023115:6988-7007 Msa1405190:CDS 25.0%
!!! TAAGGTTTTGATTGATAATG+AGG + tig0023115:7023-7042 Msa1405190:CDS 25.0%
! TGAAGATAAGCATTTGAATT+TGG + tig0023115:7245-7264 Msa1405190:CDS 25.0%
! TAGTAAATTAAATGGGAAGT+TGG + tig0023115:7278-7297 Msa1405190:CDS 25.0%
!!! AATTCTGAGAGAGAAAATTT+TGG + tig0023115:7366-7385 Msa1405190:CDS 25.0%
!! AACTATACTCTTTTCTTTCA+GGG - tig0023115:7425-7444 None:intergenic 25.0%
!! TAACTATACTCTTTTCTTTC+AGG - tig0023115:7426-7445 None:intergenic 25.0%
!! AAAGAAAAGAGTATAGTTAC+CGG + tig0023115:7427-7446 Msa1405190:CDS 25.0%
! AATGACAAGATAATACATAC+CGG - tig0023115:8287-8306 None:intergenic 25.0%
!!! GTTCTACATTCAATTTGTTA+AGG + tig0023115:8325-8344 Msa1405190:intron 25.0%
! ATGTACAACAAAAATCATCA+TGG - tig0023115:8495-8514 None:intergenic 25.0%
! ATCTTTCACTTGTATGTTAT+TGG - tig0023115:9126-9145 None:intergenic 25.0%
! TATAGGAAAAAGATGAAACT+TGG - tig0023115:9331-9350 None:intergenic 25.0%
!! ATCATGAATATTGGTTATGT+TGG + tig0023115:9475-9494 Msa1405190:three_prime_UTR 25.0%
! AGATTTCTTTGATACACATT+TGG + tig0023115:9504-9523 Msa1405190:three_prime_UTR 25.0%
! GATTTCTTTGATACACATTT+GGG + tig0023115:9505-9524 Msa1405190:three_prime_UTR 25.0%
! ACATTCTACAACTATTTGTA+AGG + tig0023115:9714-9733 Msa1405190:three_prime_UTR 25.0%
AAAAGGCAAATAAAAGGTTG+TGG - tig0023115:6198-6217 None:intergenic 30.0%
!! AATGCATTTGTTTTCCTCAT+GGG + tig0023115:6631-6650 Msa1405190:CDS 30.0%
! TTTTGCGAAACGGTAATTTT+TGG + tig0023115:6752-6771 Msa1405190:CDS 30.0%
AGTGAGAAATTGAAGAGTTT+AGG + tig0023115:6844-6863 Msa1405190:CDS 30.0%
GAATGGAAGGAATTATGTTA+AGG + tig0023115:7005-7024 Msa1405190:CDS 30.0%
! GATAATGAGGAAAAGTGTAA+TGG + tig0023115:7036-7055 Msa1405190:CDS 30.0%
!!! TGTTTTGGTTGAGAATCATA+AGG + tig0023115:7059-7078 Msa1405190:CDS 30.0%
!!! GTTTTGGTTGAGAATCATAA+GGG + tig0023115:7060-7079 Msa1405190:CDS 30.0%
TTCAAATGCTTATCTTCAAC+CGG - tig0023115:7243-7262 None:intergenic 30.0%
!! GTTTTAGATATGGACAGAAA+TGG + tig0023115:7330-7349 Msa1405190:CDS 30.0%
!! AGAGAGAAAATTTTGGTGTA+GGG + tig0023115:7373-7392 Msa1405190:CDS 30.0%
! ACTATACTCTTTTCTTTCAG+GGG - tig0023115:7424-7443 None:intergenic 30.0%
ACAAGCAAAAGAGTTTGTAA+AGG + tig0023115:7842-7861 Msa1405190:CDS 30.0%
CAAGCAAAAGAGTTTGTAAA+GGG + tig0023115:7843-7862 Msa1405190:CDS 30.0%
!! TTTGTAAAGGGTACTTATGA+TGG + tig0023115:7855-7874 Msa1405190:CDS 30.0%
ATAACAGTATGTAATCTGCT+GGG - tig0023115:8365-8384 None:intergenic 30.0%
TATAACAGTATGTAATCTGC+TGG - tig0023115:8366-8385 None:intergenic 30.0%
CAAAAATCATCATGGTTAAC+TGG - tig0023115:8487-8506 None:intergenic 30.0%
ATATTATGCTGACCATTTCT+CGG + tig0023115:8713-8732 Msa1405190:intron 30.0%
AGTTATGTGTTATGTGAACA+AGG - tig0023115:8746-8765 None:intergenic 30.0%
TTGTTCACATAACACATAAC+TGG + tig0023115:8745-8764 Msa1405190:intron 30.0%
TATTATCTCCTGTACTAACT+TGG + tig0023115:8955-8974 Msa1405190:intron 30.0%
AGACAACTTTAGTCAATTCA+TGG + tig0023115:9179-9198 Msa1405190:exon 30.0%
ACTTTAGTCAATTCATGGAA+AGG + tig0023115:9184-9203 Msa1405190:exon 30.0%
CTTTAGTCAATTCATGGAAA+GGG + tig0023115:9185-9204 Msa1405190:exon 30.0%
AGACTATTATATATCTGCCT+TGG + tig0023115:9246-9265 Msa1405190:three_prime_UTR 30.0%
ATTTATGCAAATATACCTGC+TGG - tig0023115:9281-9300 None:intergenic 30.0%
AGCAGGTATATTTGCATAAA+TGG + tig0023115:9280-9299 Msa1405190:intron 30.0%
AATGCAGCTATCATGAATAT+TGG + tig0023115:9466-9485 Msa1405190:intron 30.0%
!! TTTCAATCTATCTCTAGGAT+GGG + tig0023115:9560-9579 Msa1405190:three_prime_UTR 30.0%
!! ACTGATTTTGCATTTATGAG+AGG + tig0023115:9650-9669 Msa1405190:three_prime_UTR 30.0%
TTTCAAAGGACTACGAAATT+TGG + tig0023115:9754-9773 Msa1405190:three_prime_UTR 30.0%
AACGTAACAATTCAGAACGA+AGG - tig0023115:6320-6339 None:intergenic 35.0%
CGATAACGATCGTGAAAATA+AGG - tig0023115:6418-6437 None:intergenic 35.0%
GAATTGTGAAGAAGAATCGA+AGG - tig0023115:6445-6464 None:intergenic 35.0%
AGAAGTAGCTCGAAATGTTA+GGG - tig0023115:6497-6516 None:intergenic 35.0%
!! GAATGCATTTGTTTTCCTCA+TGG + tig0023115:6630-6649 Msa1405190:CDS 35.0%
!! ATGCATTTGTTTTCCTCATG+GGG + tig0023115:6632-6651 Msa1405190:CDS 35.0%
!!! CGAAACGGTAATTTTTGGTT+CGG + tig0023115:6757-6776 Msa1405190:CDS 35.0%
!!! TTTTTGGTTCGGTGAAGTAA+AGG + tig0023115:6768-6787 Msa1405190:CDS 35.0%
CTTTGATGAGATTGATGTTG+TGG + tig0023115:6873-6892 Msa1405190:CDS 35.0%
AGTTGTCATCTTTGAATGGA+AGG + tig0023115:6992-7011 Msa1405190:CDS 35.0%
!! GGAAAAGTGTAATGGTGTTT+TGG + tig0023115:7044-7063 Msa1405190:CDS 35.0%
GGTAGAAGAAAGAAACAAGT+TGG + tig0023115:7084-7103 Msa1405190:CDS 35.0%
! AGCTATTGGTAATCTGTTTC+AGG + tig0023115:7131-7150 Msa1405190:CDS 35.0%
ATGGACAGAAATGGAAGAAT+AGG + tig0023115:7339-7358 Msa1405190:CDS 35.0%
!! GAGAGAGAAAATTTTGGTGT+AGG + tig0023115:7372-7391 Msa1405190:CDS 35.0%
!! GAGAGAAAATTTTGGTGTAG+GGG + tig0023115:7374-7393 Msa1405190:CDS 35.0%
TAATGCTTTCAGAATCAAGC+CGG - tig0023115:7542-7561 None:intergenic 35.0%
GGTATGAAGAAGATAGAGAT+AGG + tig0023115:7682-7701 Msa1405190:CDS 35.0%
! TGAAACTTTTGTAGACGAAG+GGG - tig0023115:7772-7791 None:intergenic 35.0%
! CTGAAACTTTTGTAGACGAA+GGG - tig0023115:7773-7792 None:intergenic 35.0%
!! TCTGAAACTTTTGTAGACGA+AGG - tig0023115:7774-7793 None:intergenic 35.0%
CTTAAAGCCTATGAGTTTGT+TGG + tig0023115:7935-7954 Msa1405190:CDS 35.0%
GGAAACACTTATCTTCTTCA+TGG + tig0023115:7972-7991 Msa1405190:CDS 35.0%
TGAACTGAGAAATCTTCTCT+CGG + tig0023115:8019-8038 Msa1405190:CDS 35.0%
TTGCATAGCTTCTTCTTTAC+TGG - tig0023115:8108-8127 None:intergenic 35.0%
! GGTCAATTGATAGCAGATAT+TGG + tig0023115:8260-8279 Msa1405190:CDS 35.0%
! ATTGATAGCAGATATTGGTC+CGG + tig0023115:8265-8284 Msa1405190:CDS 35.0%
TAACAGTATGTAATCTGCTG+GGG - tig0023115:8364-8383 None:intergenic 35.0%
TTTGATGCTATGCTGTTGAA+AGG + tig0023115:8602-8621 Msa1405190:CDS 35.0%
TGAAAAACTGCACTGAGAAT+AGG + tig0023115:8800-8819 Msa1405190:intron 35.0%
TGCACTGAGAATAGGAATTT+AGG + tig0023115:8808-8827 Msa1405190:intron 35.0%
GTGAAAATCCAAGTTAGTAC+AGG - tig0023115:8966-8985 None:intergenic 35.0%
!! AATTGCAGCTTTGTTCAGAT+GGG + tig0023115:8992-9011 Msa1405190:intron 35.0%
GTTATTGGAGTCCATATCAA+GGG - tig0023115:9111-9130 None:intergenic 35.0%
TGTTATTGGAGTCCATATCA+AGG - tig0023115:9112-9131 None:intergenic 35.0%
GTTATCCAGAAGAATCAGTT+TGG + tig0023115:9207-9226 Msa1405190:three_prime_UTR 35.0%
! TGTAACCAAACTGATTCTTC+TGG - tig0023115:9215-9234 None:intergenic 35.0%
ATCAGTTTGGTTACAATTGC+TGG + tig0023115:9220-9239 Msa1405190:three_prime_UTR 35.0%
! CTTTCAATCTATCTCTAGGA+TGG + tig0023115:9559-9578 Msa1405190:three_prime_UTR 35.0%
! CGTAGTCCTTTGAAAAGTTT+GGG - tig0023115:9749-9768 None:intergenic 35.0%
! TCGTAGTCCTTTGAAAAGTT+TGG - tig0023115:9750-9769 None:intergenic 35.0%
TCAATCACAAAATGGACACG+TGG + tig0023115:6463-6482 Msa1405190:CDS 40.0%
CAGAAGTAGCTCGAAATGTT+AGG - tig0023115:6498-6517 None:intergenic 40.0%
GCATCTACATCAACCATCTA+TGG + tig0023115:6517-6536 Msa1405190:CDS 40.0%
TCTACATCAACCATCTATGG+TGG + tig0023115:6520-6539 Msa1405190:CDS 40.0%
ATCAACCATCTATGGTGGTT+GGG + tig0023115:6525-6544 Msa1405190:CDS 40.0%
!! CGCAGTTTTCTTGTTTCAGT+TGG + tig0023115:6592-6611 Msa1405190:CDS 40.0%
TTTGTGCAATGGCGATTTCT+AGG + tig0023115:6659-6678 Msa1405190:CDS 40.0%
TTGTGCAATGGCGATTTCTA+GGG + tig0023115:6660-6679 Msa1405190:CDS 40.0%
!! AATGGCGATTTCTAGGGTTA+GGG + tig0023115:6666-6685 Msa1405190:CDS 40.0%
TATTCTTCCAGCTTCTGCTA+TGG + tig0023115:6702-6721 Msa1405190:CDS 40.0%
! TCTGCTATGGTTTTCGCAAT+TGG + tig0023115:6715-6734 Msa1405190:CDS 40.0%
TTCGCAATTGGTTATAGCGT+AGG + tig0023115:6727-6746 Msa1405190:CDS 40.0%
TCGCAATTGGTTATAGCGTA+GGG + tig0023115:6728-6747 Msa1405190:CDS 40.0%
AAGTGGAAGTAGTAAGAGGA+AGG + tig0023115:6798-6817 Msa1405190:CDS 40.0%
TTGGTTGAGAATCATAAGGG+TGG + tig0023115:7063-7082 Msa1405190:CDS 40.0%
! AAGAAACAAGTTGGAGAAGC+TGG + tig0023115:7093-7112 Msa1405190:CDS 40.0%
TATCAGATGCTGCAAGCTAT+TGG + tig0023115:7117-7136 Msa1405190:CDS 40.0%
! CACATTTTCTCTGACTTTGG+TGG - tig0023115:7178-7197 None:intergenic 40.0%
CACCAAAGTCAGAGAAAATG+TGG + tig0023115:7176-7195 Msa1405190:CDS 40.0%
! CTCCACATTTTCTCTGACTT+TGG - tig0023115:7181-7200 None:intergenic 40.0%
AAGTCAGAGAAAATGTGGAG+AGG + tig0023115:7181-7200 Msa1405190:CDS 40.0%
AGAAAATGTGGAGAGGCAAT+TGG + tig0023115:7188-7207 Msa1405190:CDS 40.0%
TTGGATCAAACTCGAGGAAA+CGG + tig0023115:7207-7226 Msa1405190:CDS 40.0%
AAATGCTTATCTTCAACCGG+AGG - tig0023115:7240-7259 None:intergenic 40.0%
ATTCTTCTCAAGACTCGTTC+AGG + tig0023115:7301-7320 Msa1405190:CDS 40.0%
TTCTTCTCAAGACTCGTTCA+GGG + tig0023115:7302-7321 Msa1405190:CDS 40.0%
!! CAGGGACTCTGTTTTAGATA+TGG + tig0023115:7320-7339 Msa1405190:CDS 40.0%
GAGTATAGTTACCGGAACAA+AGG + tig0023115:7435-7454 Msa1405190:CDS 40.0%
TGAACCTCAATCCTTTGTTC+CGG - tig0023115:7449-7468 None:intergenic 40.0%
CCATCTTCAAAGAGATGCTA+TGG - tig0023115:7479-7498 None:intergenic 40.0%
! CCATAGCATCTCTTTGAAGA+TGG + tig0023115:7476-7495 Msa1405190:CDS 40.0%
TAAAGTCAGAATGAAACGCG+TGG + tig0023115:7560-7579 Msa1405190:CDS 40.0%
TAGAAGACCTGAATGTTTCC+TGG - tig0023115:7629-7648 None:intergenic 40.0%
TCAGGTCTTCTATCGACAAA+AGG + tig0023115:7637-7656 Msa1405190:CDS 40.0%
TCTATCGACAAAAGGAACAG+TGG + tig0023115:7645-7664 Msa1405190:CDS 40.0%
CTATCGACAAAAGGAACAGT+GGG + tig0023115:7646-7665 Msa1405190:CDS 40.0%
GTCATCAGCAAGTAGTTGAT+CGG - tig0023115:7721-7740 None:intergenic 40.0%
TAGATATCTCGCTGAAGCAA+CGG + tig0023115:7809-7828 Msa1405190:CDS 40.0%
AAGTTTACTCTCCAAAGCTG+TGG + tig0023115:7911-7930 Msa1405190:CDS 40.0%
GAACTGAGAAATCTTCTCTC+GGG + tig0023115:8020-8039 Msa1405190:CDS 40.0%
! TGCAGGAAGAAAGTATAGAC+TGG + tig0023115:8172-8191 Msa1405190:CDS 40.0%
ATGTCAGAGCCCTGTATAAT+TGG + tig0023115:8216-8235 Msa1405190:CDS 40.0%
TGTCAGAGCCCTGTATAATT+GGG + tig0023115:8217-8236 Msa1405190:CDS 40.0%
TATCTGCTATCAATTGACCG+CGG - tig0023115:8259-8278 None:intergenic 40.0%
!!! TATATAGGGTGCTGCTTTTG+AGG + tig0023115:8547-8566 Msa1405190:intron 40.0%
!! TGAGGCTGAAAGAGTATTCT+TGG + tig0023115:8565-8584 Msa1405190:CDS 40.0%
GGAAATGTTTATGCACCAGA+TGG + tig0023115:8623-8642 Msa1405190:CDS 40.0%
TCACATACAAGCACAACTAG+AGG + tig0023115:8690-8709 Msa1405190:intron 40.0%
GCTGTTGCAGAATTTCTTCA+TGG + tig0023115:8928-8947 Msa1405190:intron 40.0%
!! GAATTGCAGCTTTGTTCAGA+TGG + tig0023115:8991-9010 Msa1405190:intron 40.0%
!! ATTGCAGCTTTGTTCAGATG+GGG + tig0023115:8993-9012 Msa1405190:intron 40.0%
AACTTCTCCTTACTACTTCC+TGG - tig0023115:9050-9069 None:intergenic 40.0%
GAAGTTGAAGTTACTTCAGC+AGG + tig0023115:9064-9083 Msa1405190:CDS 40.0%
AGTTACTTCAGCAGGCTAAA+CGG + tig0023115:9072-9091 Msa1405190:CDS 40.0%
ACAAACCGCAATAAGATCTC+AGG + tig0023115:9531-9550 Msa1405190:three_prime_UTR 40.0%
GGTGCTTTCAATCTATCTCT+AGG + tig0023115:9555-9574 Msa1405190:three_prime_UTR 40.0%
! AGTCAGCCCAAACTTTTCAA+AGG + tig0023115:9740-9759 Msa1405190:three_prime_UTR 40.0%
AGGACACGTGTTTAACTGTG+CGG + tig0023115:6235-6254 Msa1405190:five_prime_UTR 45.0%
CATCAACCATCTATGGTGGT+TGG + tig0023115:6524-6543 Msa1405190:CDS 45.0%
TTCATCCCAACCACCATAGA+TGG - tig0023115:6533-6552 None:intergenic 45.0%
TTGCACAAACAATCCCCATG+AGG - tig0023115:6648-6667 None:intergenic 45.0%
CATGGGGATTGTTTGTGCAA+TGG + tig0023115:6648-6667 Msa1405190:CDS 45.0%
!! CAATGGCGATTTCTAGGGTT+AGG + tig0023115:6665-6684 Msa1405190:CDS 45.0%
! AGCGTAGGGTTTTTGCGAAA+CGG + tig0023115:6742-6761 Msa1405190:CDS 45.0%
TTCGGTGAAGTAAAGGTGAG+TGG + tig0023115:6775-6794 Msa1405190:CDS 45.0%
GAAGTAAAGGTGAGTGGAAG+TGG + tig0023115:6781-6800 Msa1405190:CDS 45.0%
GTGGAAGTGGAAGTAGTAAG+AGG + tig0023115:6794-6813 Msa1405190:CDS 45.0%
AGGCAATTGGATCAAACTCG+AGG + tig0023115:7201-7220 Msa1405190:CDS 45.0%
GTTACCGGAACAAAGGATTG+AGG + tig0023115:7442-7461 Msa1405190:CDS 45.0%
! AGAATCAAGCCGGCTTTCAT+GGG - tig0023115:7532-7551 None:intergenic 45.0%
AAGCAACTGCTCACGCAAAA+AGG - tig0023115:7598-7617 None:intergenic 45.0%
CGTGAGCAGTTGCTTAATCA+AGG + tig0023115:7603-7622 Msa1405190:CDS 45.0%
ATCAAGGCCAGGAAACATTC+AGG + tig0023115:7619-7638 Msa1405190:CDS 45.0%
TCTTCATACCGAGACCTATC+AGG - tig0023115:7672-7691 None:intergenic 45.0%
!! AGGCTTTAAGTCCACAGCTT+TGG - tig0023115:7925-7944 None:intergenic 45.0%
CCTACAGCCAACAAACTCAT+AGG - tig0023115:7945-7964 None:intergenic 45.0%
!! CCTATGAGTTTGTTGGCTGT+AGG + tig0023115:7942-7961 Msa1405190:CDS 45.0%
GAAGAGCTACTGGTAAATGC+AGG + tig0023115:8155-8174 Msa1405190:CDS 45.0%
GTCAGAGCCCTGTATAATTG+GGG + tig0023115:8218-8237 Msa1405190:CDS 45.0%
TGCAAGGCCCCAATTATACA+GGG - tig0023115:8228-8247 None:intergenic 45.0%
ACAGCGCATGTAATACCATC+TGG - tig0023115:8641-8660 None:intergenic 45.0%
CAAGGTATGTCACCGAGAAA+TGG - tig0023115:8728-8747 None:intergenic 45.0%
!! AGCTTTGTTCAGATGGGGTA+TGG + tig0023115:8998-9017 Msa1405190:intron 45.0%
TACAGCAGAGATCTCGCTTA+AGG + tig0023115:9024-9043 Msa1405190:CDS 45.0%
CTTAAGGCCAGGAAGTAGTA+AGG + tig0023115:9040-9059 Msa1405190:CDS 45.0%
ATACGAAGACGCCCTTGATA+TGG + tig0023115:9097-9116 Msa1405190:CDS 45.0%
CTCAGAGACACACAAGGATA+AGG - tig0023115:9150-9169 None:intergenic 45.0%
GTTAAGCTCAGAGACACACA+AGG - tig0023115:9156-9175 None:intergenic 45.0%
! CAAATATACCTGCTGGTTGC+TGG - tig0023115:9274-9293 None:intergenic 45.0%
CCTTCAGCGTAAATGAGCTA+CGG + tig0023115:9303-9322 Msa1405190:intron 45.0%
AACCGCAATAAGATCTCAGG+AGG + tig0023115:9534-9553 Msa1405190:three_prime_UTR 45.0%
CACCTCCTGAGATCTTATTG+CGG - tig0023115:9539-9558 None:intergenic 45.0%
GCGCAACGAATCAAACTCAC+CGG - tig0023115:6575-6594 None:intergenic 50.0%
GCGAAAACCATAGCAGAAGC+TGG - tig0023115:6712-6731 None:intergenic 50.0%
! GGGGATAATCACAGAAGTGC+TGG + tig0023115:7393-7412 Msa1405190:CDS 50.0%
CAGCAGTGTGACAGACATGT+GGG + tig0023115:7503-7522 Msa1405190:CDS 50.0%
TGTGGGAATCCCATGAAAGC+CGG + tig0023115:7520-7539 Msa1405190:CDS 50.0%
! CAGAATCAAGCCGGCTTTCA+TGG - tig0023115:7533-7552 None:intergenic 50.0%
GCAGTTGCTTAATCAAGGCC+AGG + tig0023115:7608-7627 Msa1405190:CDS 50.0%
AAAGGAACAGTGGGCCTGAT+AGG + tig0023115:7655-7674 Msa1405190:CDS 50.0%
! TTGTTGGCTGTAGGACAGCT+AGG + tig0023115:7951-7970 Msa1405190:CDS 50.0%
TGAAGAGAGCGAAGAGCTAC+TGG + tig0023115:8145-8164 Msa1405190:CDS 50.0%
GTGCAAGGCCCCAATTATAC+AGG - tig0023115:8229-8248 None:intergenic 50.0%
AGTATGTAATCTGCTGGGGC+GGG - tig0023115:8360-8379 None:intergenic 50.0%
CAGTATGTAATCTGCTGGGG+CGG - tig0023115:8361-8380 None:intergenic 50.0%
TAGTGCAGAGATTGTGCGTG+CGG - tig0023115:8866-8885 None:intergenic 50.0%
CCGTAGCTCATTTACGCTGA+AGG - tig0023115:9306-9325 None:intergenic 50.0%
AGGAAACGGTGCTTTGCCTC+CGG + tig0023115:7221-7240 Msa1405190:CDS 55.0%
CCACATGTCTGTCACACTGC+TGG - tig0023115:7505-7524 None:intergenic 55.0%
CCAGCAGTGTGACAGACATG+TGG + tig0023115:7502-7521 Msa1405190:CDS 55.0%
ACAGTGGGCCTGATAGGTCT+CGG + tig0023115:7661-7680 Msa1405190:CDS 55.0%
GGCCTTGCACTTTCTTTCCG+CGG + tig0023115:8239-8258 Msa1405190:CDS 55.0%
! GACCGCGGAAAGAAAGTGCA+AGG - tig0023115:8244-8263 None:intergenic 55.0%
CAGAGATCTCGCTTAAGGCC+AGG + tig0023115:9029-9048 Msa1405190:CDS 55.0%
CTCGCCAGCTCAGAAGCTTC+CGG + tig0023115:6553-6572 Msa1405190:CDS 60.0%
CTCACCGGAAGCTTCTGAGC+TGG - tig0023115:6560-6579 None:intergenic 60.0%
ATGTAATCTGCTGGGGCGGG+AGG - tig0023115:8357-8376 None:intergenic 60.0%
! CCTGCTGGTTGCTGGATCCA+AGG - tig0023115:9266-9285 None:intergenic 60.0%
CCTTGGATCCAGCAACCAGC+AGG + tig0023115:9263-9282 Msa1405190:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
tig0023115 gene 6187 9779 6187 ID=Msa1405190;Name=Msa1405190
tig0023115 mRNA 6187 9779 6187 ID=Msa1405190-mRNA-1;Parent=Msa1405190;Name=Msa1405190-mRNA-1;_AED=0.03;_eAED=0.03;_QI=177|1|1|1|0.66|0.5|4|401|734
tig0023115 exon 6187 8286 6187 ID=Msa1405190-mRNA-1:exon:23963;Parent=Msa1405190-mRNA-1
tig0023115 exon 8554 8644 8554 ID=Msa1405190-mRNA-1:exon:23964;Parent=Msa1405190-mRNA-1
tig0023115 exon 9000 9284 9000 ID=Msa1405190-mRNA-1:exon:23965;Parent=Msa1405190-mRNA-1
tig0023115 exon 9473 9779 9473 ID=Msa1405190-mRNA-1:exon:23966;Parent=Msa1405190-mRNA-1
tig0023115 five_prime_UTR 6187 6363 6187 ID=Msa1405190-mRNA-1:five_prime_utr;Parent=Msa1405190-mRNA-1
tig0023115 CDS 6364 8286 6364 ID=Msa1405190-mRNA-1:cds;Parent=Msa1405190-mRNA-1
tig0023115 CDS 8554 8644 8554 ID=Msa1405190-mRNA-1:cds;Parent=Msa1405190-mRNA-1
tig0023115 CDS 9000 9190 9000 ID=Msa1405190-mRNA-1:cds;Parent=Msa1405190-mRNA-1
tig0023115 three_prime_UTR 9191 9284 9191 ID=Msa1405190-mRNA-1:three_prime_utr;Parent=Msa1405190-mRNA-1
tig0023115 three_prime_UTR 9473 9779 9473 ID=Msa1405190-mRNA-1:three_prime_utr;Parent=Msa1405190-mRNA-1
Gene Sequence

>Msa1405190

ATGAATTTCGTTATTGCTAAAAATCCAATTAATCTTTTCAATTTTTATTCACCTTATTTTCACGATCGTTATCGTAATCCTTCGATTCTTCTTCACAATTCAATCACAAAATGGACACGTGGAACTAAAACCCTAACATTTCGAGCTACTTCTGCATCTACATCAACCATCTATGGTGGTTGGGATGAACTCGCCAGCTCAGAAGCTTCCGGTGAGTTTGATTCGTTGCGCAGTTTTCTTGTTTCAGTTGGAATCGATGATAGAAAGAATGCATTTGTTTTCCTCATGGGGATTGTTTGTGCAATGGCGATTTCTAGGGTTAGGGTTTCTACTGTGCTTATTCTTCCAGCTTCTGCTATGGTTTTCGCAATTGGTTATAGCGTAGGGTTTTTGCGAAACGGTAATTTTTGGTTCGGTGAAGTAAAGGTGAGTGGAAGTGGAAGTAGTAAGAGGAAGGAGAAAGATGAGAATTTTAATTCGAGTGAGAAATTGAAGAGTTTAGGTGAATTCTTTGATGAGATTGATGTTGTGGTTAATGATTTTAAGATTGATATAGAAAATGCTATTAAGAATAAGAAGATTAAAATGGATGATTTGTATGGCTATGTTGAAGTTAGTGATAAGATAAAGTTGTCATCTTTGAATGGAAGGAATTATGTTAAGGTTTTGATTGATAATGAGGAAAAGTGTAATGGTGTTTTGGTTGAGAATCATAAGGGTGGTAGAAGAAAGAAACAAGTTGGAGAAGCTGGATATCAGATGCTGCAAGCTATTGGTAATCTGTTTCAGGAAAATTTGCGTAGTTCATATTCCACCAAAGTCAGAGAAAATGTGGAGAGGCAATTGGATCAAACTCGAGGAAACGGTGCTTTGCCTCCGGTTGAAGATAAGCATTTGAATTTGGTTGATGATAGTAGTAAATTAAATGGGAAGTTGGATTCTTCTCAAGACTCGTTCAGGGACTCTGTTTTAGATATGGACAGAAATGGAAGAATAGGAACTAATTCTGAGAGAGAAAATTTTGGTGTAGGGGATAATCACAGAAGTGCTGGCGAATCCCCTGAAAGAAAAGAGTATAGTTACCGGAACAAAGGATTGAGGTTCACAAATAACCATAGCATCTCTTTGAAGATGGATTCCAGCAGTGTGACAGACATGTGGGAATCCCATGAAAGCCGGCTTGATTCTGAAAGCATTAAAGTCAGAATGAAACGCGTGGAAAGCGAGACTTCCTTTTTGCGTGAGCAGTTGCTTAATCAAGGCCAGGAAACATTCAGGTCTTCTATCGACAAAAGGAACAGTGGGCCTGATAGGTCTCGGTATGAAGAAGATAGAGATAGGATGAATTATGATGCCGATCAACTACTTGCTGATGACTTGTCTGAGAGTGACAATGAATTCAATGCCCCTTCGTCTACAAAAGTTTCAGATGATATAATGTTTGATAGATATCTCGCTGAAGCAACGGATCTTCTAAAACAAGCAAAAGAGTTTGTAAAGGGTACTTATGATGGCGAACAAGCTGAAATCATGTTATACAACACTGCAAGTTTACTCTCCAAAGCTGTGGACTTAAAGCCTATGAGTTTGTTGGCTGTAGGACAGCTAGGAAACACTTATCTTCTTCATGGAGAATTAAAGTTGAAGATTAGTCGTGAACTGAGAAATCTTCTCTCGGGAAGTATCGAACGATCATCTGCAAAACGTAGTAGAATAATTAAGGAACTGCGAAATAAAATTACCAGTAAAGAAGAAGCTATGCAATTGCTTATTGATGTATGTGAAGAGAGCGAAGAGCTACTGGTAAATGCAGGAAGAAAGTATAGACTGGCATTGTCAATTGATTCAAATGATGTCAGAGCCCTGTATAATTGGGGCCTTGCACTTTCTTTCCGCGGTCAATTGATAGCAGATATTGGTCCGGGTGCTGCTTTTGAGGCTGAAAGAGTATTCTTGGCTGCAATTGACAAGTTTGATGCTATGCTGTTGAAAGGAAATGTTTATGCACCAGATGCTTTGTTCAGATGGGGTATGGCTTTACAGCAGAGATCTCGCTTAAGGCCAGGAAGTAGTAAGGAGAAGTTGAAGTTACTTCAGCAGGCTAAACGGCTATACGAAGACGCCCTTGATATGGACTCCAATAACATACAAGTGAAAGATGCCTTATCCTTGTGTGTCTCTGAGCTTAACTATAGACAACTTTAG

Protein sequence

>Msa1405190

MNFVIAKNPINLFNFYSPYFHDRYRNPSILLHNSITKWTRGTKTLTFRATSASTSTIYGGWDELASSEASGEFDSLRSFLVSVGIDDRKNAFVFLMGIVCAMAISRVRVSTVLILPASAMVFAIGYSVGFLRNGNFWFGEVKVSGSGSSKRKEKDENFNSSEKLKSLGEFFDEIDVVVNDFKIDIENAIKNKKIKMDDLYGYVEVSDKIKLSSLNGRNYVKVLIDNEEKCNGVLVENHKGGRRKKQVGEAGYQMLQAIGNLFQENLRSSYSTKVRENVERQLDQTRGNGALPPVEDKHLNLVDDSSKLNGKLDSSQDSFRDSVLDMDRNGRIGTNSERENFGVGDNHRSAGESPERKEYSYRNKGLRFTNNHSISLKMDSSSVTDMWESHESRLDSESIKVRMKRVESETSFLREQLLNQGQETFRSSIDKRNSGPDRSRYEEDRDRMNYDADQLLADDLSESDNEFNAPSSTKVSDDIMFDRYLAEATDLLKQAKEFVKGTYDGEQAEIMLYNTASLLSKAVDLKPMSLLAVGQLGNTYLLHGELKLKISRELRNLLSGSIERSSAKRSRIIKELRNKITSKEEAMQLLIDVCEESEELLVNAGRKYRLALSIDSNDVRALYNWGLALSFRGQLIADIGPGAAFEAERVFLAAIDKFDAMLLKGNVYAPDALFRWGMALQQRSRLRPGSSKEKLKLLQQAKRLYEDALDMDSNNIQVKDALSLCVSELNYRQL*