Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496470 | XP_003599534.2 | 95.492 | 488 | 22 | 0 | 1 | 488 | 1 | 488 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496470 | sp|Q9FFZ1|PPH_ARATH | 69.212 | 419 | 121 | 5 | 66 | 479 | 30 | 445 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496470 | G7IZM0 | 95.492 | 488 | 22 | 0 | 1 | 488 | 1 | 488 | 0.0 | 964 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014970 | Msa0496470 | 0.810503 | 1.116085e-50 | -8.615850e-47 |
| Msa0021980 | Msa0496470 | 0.848742 | 5.047370e-60 | -8.615850e-47 |
| Msa0026120 | Msa0496470 | 0.807906 | 4.020936e-50 | -8.615850e-47 |
| Msa0050320 | Msa0496470 | 0.850106 | 2.104162e-60 | -8.615850e-47 |
| Msa0053480 | Msa0496470 | 0.801911 | 7.199846e-49 | -8.615850e-47 |
| Msa0070090 | Msa0496470 | 0.809670 | 1.686655e-50 | -8.615850e-47 |
| Msa0083200 | Msa0496470 | 0.807352 | 5.270847e-50 | -8.615850e-47 |
| Msa0090350 | Msa0496470 | 0.832932 | 7.128869e-56 | -8.615850e-47 |
| Msa0099090 | Msa0496470 | 0.806330 | 8.670554e-50 | -8.615850e-47 |
| Msa0112800 | Msa0496470 | 0.801444 | 8.976918e-49 | -8.615850e-47 |
| Msa0117300 | Msa0496470 | 0.836151 | 1.107225e-56 | -8.615850e-47 |
| Msa0121480 | Msa0496470 | 0.834667 | 2.624815e-56 | -8.615850e-47 |
| Msa0137810 | Msa0496470 | 0.807813 | 4.207478e-50 | -8.615850e-47 |
| Msa0154720 | Msa0496470 | 0.849746 | 2.653392e-60 | -8.615850e-47 |
| Msa0160650 | Msa0496470 | 0.867830 | 1.024666e-65 | -8.615850e-47 |
| Msa0166580 | Msa0496470 | 0.800547 | 1.369442e-48 | -8.615850e-47 |
| Msa0184030 | Msa0496470 | 0.842169 | 3.047628e-58 | -8.615850e-47 |
| Msa0188500 | Msa0496470 | 0.803109 | 4.077768e-49 | -8.615850e-47 |
| Msa0198140 | Msa0496470 | 0.824351 | 8.460475e-54 | -8.615850e-47 |
| Msa0198220 | Msa0496470 | 0.827023 | 1.966309e-54 | -8.615850e-47 |
| Msa0220410 | Msa0496470 | 0.807453 | 5.017797e-50 | -8.615850e-47 |
| Msa0221940 | Msa0496470 | 0.803720 | 3.046105e-49 | -8.615850e-47 |
| Msa0223190 | Msa0496470 | 0.844844 | 5.878384e-59 | -8.615850e-47 |
| Msa0225370 | Msa0496470 | 0.801024 | 1.094530e-48 | -8.615850e-47 |
| Msa0229420 | Msa0496470 | 0.807001 | 6.255275e-50 | -8.615850e-47 |
| Msa0229750 | Msa0496470 | 0.813255 | 2.807426e-51 | -8.615850e-47 |
| Msa0372380 | Msa0496470 | 0.812059 | 5.129954e-51 | -8.615850e-47 |
| Msa0372990 | Msa0496470 | 0.825370 | 4.864671e-54 | -8.615850e-47 |
| Msa0375930 | Msa0496470 | 0.822587 | 2.186867e-53 | -8.615850e-47 |
| Msa0378620 | Msa0496470 | 0.821702 | 3.507622e-53 | -8.615850e-47 |
| Msa0379720 | Msa0496470 | 0.807858 | 4.115623e-50 | -8.615850e-47 |
| Msa0387740 | Msa0496470 | 0.810401 | 1.173843e-50 | -8.615850e-47 |
| Msa0401570 | Msa0496470 | 0.846772 | 1.760575e-59 | -8.615850e-47 |
| Msa0403720 | Msa0496470 | 0.849868 | 2.452340e-60 | -8.615850e-47 |
| Msa0408160 | Msa0496470 | 0.823124 | 1.640071e-53 | -8.615850e-47 |
| Msa0414010 | Msa0496470 | 0.818862 | 1.570601e-52 | -8.615850e-47 |
| Msa0421390 | Msa0496470 | 0.844074 | 9.466550e-59 | -8.615850e-47 |
| Msa0424570 | Msa0496470 | 0.825636 | 4.206413e-54 | -8.615850e-47 |
| Msa0425020 | Msa0496470 | 0.800534 | 1.378051e-48 | -8.615850e-47 |
| Msa0429100 | Msa0496470 | 0.816538 | 5.252092e-52 | -8.615850e-47 |
| Msa0429130 | Msa0496470 | 0.816693 | 4.847976e-52 | -8.615850e-47 |
| Msa0431940 | Msa0496470 | 0.836392 | 9.616045e-57 | -8.615850e-47 |
| Msa0436590 | Msa0496470 | 0.813817 | 2.112181e-51 | -8.615850e-47 |
| Msa0436600 | Msa0496470 | 0.840065 | 1.088159e-57 | -8.615850e-47 |
| Msa0436610 | Msa0496470 | 0.837023 | 6.637999e-57 | -8.615850e-47 |
| Msa0448400 | Msa0496470 | 0.874848 | 4.900504e-68 | -8.615850e-47 |
| Msa0451370 | Msa0496470 | 0.820086 | 8.257777e-53 | -8.615850e-47 |
| Msa0472870 | Msa0496470 | 0.822352 | 2.480590e-53 | -8.615850e-47 |
| Msa0476730 | Msa0496470 | 0.820908 | 5.349740e-53 | -8.615850e-47 |
| Msa0264240 | Msa0496470 | 0.814149 | 1.784536e-51 | -8.615850e-47 |
| Msa0264420 | Msa0496470 | 0.854542 | 1.148841e-61 | -8.615850e-47 |
| Msa0266380 | Msa0496470 | 0.811951 | 5.415863e-51 | -8.615850e-47 |
| Msa0278340 | Msa0496470 | 0.819767 | 9.767713e-53 | -8.615850e-47 |
| Msa0302310 | Msa0496470 | 0.857927 | 1.169134e-62 | -8.615850e-47 |
| Msa0305580 | Msa0496470 | 0.806376 | 8.476664e-50 | -8.615850e-47 |
| Msa0311330 | Msa0496470 | 0.812393 | 4.337034e-51 | -8.615850e-47 |
| Msa0339560 | Msa0496470 | 0.826180 | 3.124324e-54 | -8.615850e-47 |
| Msa0339670 | Msa0496470 | 0.854254 | 1.390839e-61 | -8.615850e-47 |
| Msa0341860 | Msa0496470 | 0.804624 | 1.975178e-49 | -8.615850e-47 |
| Msa0343200 | Msa0496470 | 0.813029 | 3.147082e-51 | -8.615850e-47 |
| Msa0352640 | Msa0496470 | 0.869047 | 4.149067e-66 | -8.615850e-47 |
| Msa0359230 | Msa0496470 | 0.816016 | 6.872741e-52 | -8.615850e-47 |
| Msa0364010 | Msa0496470 | 0.825509 | 4.508879e-54 | -8.615850e-47 |
| Msa0483160 | Msa0496470 | 0.817973 | 2.497664e-52 | -8.615850e-47 |
| Msa0486850 | Msa0496470 | 0.807304 | 5.396101e-50 | -8.615850e-47 |
| Msa0496460 | Msa0496470 | 0.937836 | 1.811254e-98 | -8.615850e-47 |
| Msa0496470 | Msa0496570 | 0.958569 | 1.703582e-116 | -8.615850e-47 |
| Msa0496470 | Msa0498080 | 0.808589 | 2.875549e-50 | -8.615850e-47 |
| Msa0496470 | Msa0505610 | 0.802418 | 5.662879e-49 | -8.615850e-47 |
| Msa0496470 | Msa0509510 | 0.802177 | 6.348045e-49 | -8.615850e-47 |
| Msa0496470 | Msa0512770 | 0.820413 | 6.951712e-53 | -8.615850e-47 |
| Msa0496470 | Msa0516000 | 0.819586 | 1.074755e-52 | -8.615850e-47 |
| Msa0496470 | Msa0520810 | 0.845895 | 3.051951e-59 | -8.615850e-47 |
| Msa0496470 | Msa0521100 | 0.814563 | 1.445878e-51 | -8.615850e-47 |
| Msa0496470 | Msa0546370 | 0.882151 | 1.324336e-70 | -8.615850e-47 |
| Msa0496470 | Msa0554440 | 0.829221 | 5.812066e-55 | -8.615850e-47 |
| Msa0496470 | Msa0555510 | 0.836909 | 7.097070e-57 | -8.615850e-47 |
| Msa0496470 | Msa0575540 | 0.804036 | 2.619863e-49 | -8.615850e-47 |
| Msa0496470 | Msa0584590 | 0.800994 | 1.109654e-48 | -8.615850e-47 |
| Msa0496470 | Msa0595240 | 0.803306 | 3.712703e-49 | -8.615850e-47 |
| Msa0496470 | Msa0604640 | 0.804365 | 2.237414e-49 | -8.615850e-47 |
| Msa0496470 | Msa0604890 | 0.808159 | 3.552138e-50 | -8.615850e-47 |
| Msa0496470 | Msa0608940 | 0.821663 | 3.581296e-53 | -8.615850e-47 |
| Msa0496470 | Msa0623360 | 0.846661 | 1.887893e-59 | -8.615850e-47 |
| Msa0496470 | Msa0630850 | 0.864525 | 1.141933e-64 | -8.615850e-47 |
| Msa0496470 | Msa0646180 | 0.818547 | 1.851710e-52 | -8.615850e-47 |
| Msa0496470 | Msa0648170 | 0.815608 | 8.473422e-52 | -8.615850e-47 |
| Msa0496470 | Msa0648200 | 0.847118 | 1.415636e-59 | -8.615850e-47 |
| Msa0496470 | Msa0648300 | 0.825175 | 5.410136e-54 | -8.615850e-47 |
| Msa0496470 | Msa0649530 | 0.833757 | 4.440081e-56 | -8.615850e-47 |
| Msa0496470 | Msa0655610 | 0.800515 | 1.390323e-48 | -8.615850e-47 |
| Msa0496470 | Msa0659020 | 0.801397 | 9.177638e-49 | -8.615850e-47 |
| Msa0496470 | Msa0664110 | 0.806372 | 8.492224e-50 | -8.615850e-47 |
| Msa0496470 | Msa0664130 | 0.814039 | 1.887546e-51 | -8.615850e-47 |
| Msa0496470 | Msa0681880 | 0.852141 | 5.608140e-61 | -8.615850e-47 |
| Msa0496470 | Msa0685390 | 0.803306 | 3.713292e-49 | -8.615850e-47 |
| Msa0496470 | Msa0691140 | 0.825663 | 4.145951e-54 | -8.615850e-47 |
| Msa0496470 | Msa0691740 | 0.825208 | 5.314573e-54 | -8.615850e-47 |
| Msa0496470 | Msa0704780 | 0.820770 | 5.753176e-53 | -8.615850e-47 |
| Msa0496470 | Msa0713530 | 0.824276 | 8.812925e-54 | -8.615850e-47 |
| Msa0496470 | Msa0714060 | 0.818279 | 2.129323e-52 | -8.615850e-47 |
| Msa0496470 | Msa0714200 | 0.811420 | 7.064651e-51 | -8.615850e-47 |
| Msa0496470 | Msa0722660 | 0.819945 | 8.896016e-53 | -8.615850e-47 |
| Msa0496470 | Msa0729780 | 0.825214 | 5.295927e-54 | -8.615850e-47 |
| Msa0496470 | Msa0734190 | 0.825182 | 5.389470e-54 | -8.615850e-47 |
| Msa0496470 | Msa0738600 | 0.835889 | 1.290064e-56 | -8.615850e-47 |
| Msa0496470 | Msa0741600 | 0.836534 | 8.845058e-57 | -8.615850e-47 |
| Msa0496470 | Msa0747660 | 0.817023 | 4.088285e-52 | -8.615850e-47 |
| Msa0496470 | Msa0755500 | 0.804544 | 2.053359e-49 | -8.615850e-47 |
| Msa0496470 | Msa0755590 | 0.803640 | 3.165904e-49 | -8.615850e-47 |
| Msa0496470 | Msa0756440 | 0.803924 | 2.763584e-49 | -8.615850e-47 |
| Msa0496470 | Msa0756940 | 0.808213 | 3.458067e-50 | -8.615850e-47 |
| Msa0496470 | Msa0770020 | 0.839297 | 1.724324e-57 | -8.615850e-47 |
| Msa0496470 | Msa0775420 | 0.849198 | 3.771674e-60 | -8.615850e-47 |
| Msa0496470 | Msa0796460 | 0.855229 | 7.255675e-62 | -8.615850e-47 |
| Msa0496470 | Msa0797240 | 0.825683 | 4.099895e-54 | -8.615850e-47 |
| Msa0496470 | Msa0807980 | 0.879388 | 1.297570e-69 | -8.615850e-47 |
| Msa0496470 | Msa0812800 | 0.846312 | 2.351339e-59 | -8.615850e-47 |
| Msa0496470 | Msa0818950 | 0.836413 | 9.495428e-57 | -8.615850e-47 |
| Msa0496470 | Msa0834200 | 0.834607 | 2.718304e-56 | -8.615850e-47 |
| Msa0496470 | Msa0834240 | 0.835556 | 1.566136e-56 | -8.615850e-47 |
| Msa0496470 | Msa0834830 | 0.800892 | 1.164204e-48 | -8.615850e-47 |
| Msa0496470 | Msa0835010 | 0.819100 | 1.386956e-52 | -8.615850e-47 |
| Msa0496470 | Msa0835550 | 0.810725 | 9.992525e-51 | -8.615850e-47 |
| Msa0496470 | Msa0836510 | 0.808412 | 3.136223e-50 | -8.615850e-47 |
| Msa0496470 | Msa0846300 | 0.817760 | 2.789484e-52 | -8.615850e-47 |
| Msa0496470 | Msa0848980 | 0.808502 | 3.001412e-50 | -8.615850e-47 |
| Msa0496470 | Msa0853150 | 0.826760 | 2.272621e-54 | -8.615850e-47 |
| Msa0496470 | Msa0861480 | 0.802639 | 5.098752e-49 | -8.615850e-47 |
| Msa0496470 | Msa0927890 | 0.842428 | 2.602417e-58 | -8.615850e-47 |
| Msa0496470 | Msa0930090 | 0.832611 | 8.563792e-56 | -8.615850e-47 |
| Msa0496470 | Msa0938300 | 0.816781 | 4.633361e-52 | -8.615850e-47 |
| Msa0496470 | Msa0967250 | 0.850515 | 1.615346e-60 | -8.615850e-47 |
| Msa0496470 | Msa0967260 | 0.820590 | 6.329360e-53 | -8.615850e-47 |
| Msa0496470 | Msa0984820 | 0.818937 | 1.510521e-52 | -8.615850e-47 |
| Msa0496470 | Msa0985040 | 0.803710 | 3.060658e-49 | -8.615850e-47 |
| Msa0496470 | Msa0995220 | 0.803354 | 3.628515e-49 | -8.615850e-47 |
| Msa0496470 | Msa0995660 | 0.814139 | 1.793533e-51 | -8.615850e-47 |
| Msa0496470 | Msa0998940 | 0.840843 | 6.810349e-58 | -8.615850e-47 |
| Msa0496470 | Msa1031220 | 0.803893 | 2.804276e-49 | -8.615850e-47 |
| Msa0496470 | Msa1033230 | 0.806017 | 1.008814e-49 | -8.615850e-47 |
| Msa0496470 | Msa1038110 | 0.833981 | 3.902246e-56 | -8.615850e-47 |
| Msa0496470 | Msa1038570 | 0.823834 | 1.119051e-53 | -8.615850e-47 |
| Msa0496470 | Msa1038580 | 0.813357 | 2.666846e-51 | -8.615850e-47 |
| Msa0496470 | Msa1038610 | 0.806326 | 8.684278e-50 | -8.615850e-47 |
| Msa0496470 | Msa1041550 | 0.812584 | 3.939166e-51 | -8.615850e-47 |
| Msa0496470 | Msa1044450 | 0.810811 | 9.575217e-51 | -8.615850e-47 |
| Msa0496470 | Msa1055710 | 0.805274 | 1.445068e-49 | -8.615850e-47 |
| Msa0496470 | Msa1065620 | 0.823968 | 1.041073e-53 | -8.615850e-47 |
| Msa0496470 | Msa1071310 | 0.817870 | 2.635052e-52 | -8.615850e-47 |
| Msa0496470 | Msa1071460 | 0.812908 | 3.346202e-51 | -8.615850e-47 |
| Msa0496470 | Msa1072770 | 0.825200 | 5.336480e-54 | -8.615850e-47 |
| Msa0496470 | Msa1081530 | 0.837953 | 3.833882e-57 | -8.615850e-47 |
| Msa0496470 | Msa1089130 | 0.821151 | 4.703599e-53 | -8.615850e-47 |
| Msa0496470 | Msa1101610 | 0.822179 | 2.721183e-53 | -8.615850e-47 |
| Msa0496470 | Msa1122480 | 0.828459 | 8.887307e-55 | -8.615850e-47 |
| Msa0496470 | Msa1129160 | 0.810662 | 1.031146e-50 | -8.615850e-47 |
| Msa0496470 | Msa1129660 | 0.824519 | 7.726591e-54 | -8.615850e-47 |
| Msa0496470 | Msa1147600 | 0.808005 | 3.829663e-50 | -8.615850e-47 |
| Msa0496470 | Msa1154770 | 0.815606 | 8.480555e-52 | -8.615850e-47 |
| Msa0496470 | Msa1169590 | 0.805380 | 1.372845e-49 | -8.615850e-47 |
| Msa0496470 | Msa1172070 | 0.822048 | 2.918269e-53 | -8.615850e-47 |
| Msa0496470 | Msa1172120 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
| Msa0496470 | Msa1182400 | 0.805151 | 1.533310e-49 | -8.615850e-47 |
| Msa0496470 | Msa1186010 | 0.819656 | 1.035803e-52 | -8.615850e-47 |
| Msa0496470 | Msa1188820 | 0.807811 | 4.212567e-50 | -8.615850e-47 |
| Msa0496470 | Msa1194170 | -0.812729 | 3.661989e-51 | -8.615850e-47 |
| Msa0496470 | Msa1199750 | 0.803528 | 3.339801e-49 | -8.615850e-47 |
| Msa0496470 | Msa1207760 | 0.827291 | 1.696853e-54 | -8.615850e-47 |
| Msa0496470 | Msa1216700 | 0.855824 | 4.867150e-62 | -8.615850e-47 |
| Msa0496470 | Msa1216900 | 0.853962 | 1.689273e-61 | -8.615850e-47 |
| Msa0496470 | Msa1223510 | 0.854327 | 1.324885e-61 | -8.615850e-47 |
| Msa0496470 | Msa1229770 | 0.804231 | 2.385160e-49 | -8.615850e-47 |
| Msa0496470 | Msa1230190 | 0.808924 | 2.438411e-50 | -8.615850e-47 |
| Msa0496470 | Msa1242990 | 0.815299 | 9.925793e-52 | -8.615850e-47 |
| Msa0496470 | Msa1257960 | 0.801013 | 1.100024e-48 | -8.615850e-47 |
| Msa0496470 | Msa1262740 | 0.851914 | 6.505272e-61 | -8.615850e-47 |
| Msa0496470 | Msa1263610 | 0.849611 | 2.894181e-60 | -8.615850e-47 |
| Msa0496470 | Msa1279310 | 0.807326 | 5.338592e-50 | -8.615850e-47 |
| Msa0496470 | Msa1279320 | 0.805097 | 1.573849e-49 | -8.615850e-47 |
| Msa0496470 | Msa1296610 | 0.812216 | 4.739569e-51 | -8.615850e-47 |
| Msa0496470 | Msa1298540 | 0.809390 | 1.937573e-50 | -8.615850e-47 |
| Msa0496470 | Msa1320530 | -0.807851 | 4.130370e-50 | -8.615850e-47 |
| Msa0496470 | Msa1323920 | 0.805820 | 1.109962e-49 | -8.615850e-47 |
| Msa0496470 | Msa1329660 | 0.842842 | 2.019605e-58 | -8.615850e-47 |
| Msa0496470 | Msa1329820 | 0.800420 | 1.453215e-48 | -8.615850e-47 |
| Msa0496470 | Msa1339310 | 0.823937 | 1.058524e-53 | -8.615850e-47 |
| Msa0496470 | Msa1342400 | 0.852622 | 4.091072e-61 | -8.615850e-47 |
| Msa0496470 | Msa1349410 | 0.811820 | 5.783311e-51 | -8.615850e-47 |
| Msa0496470 | Msa1351590 | 0.807370 | 5.225671e-50 | -8.615850e-47 |
| Msa0496470 | Msa1353280 | 0.839993 | 1.136229e-57 | -8.615850e-47 |
| Msa0496470 | Msa1357720 | 0.841619 | 4.258798e-58 | -8.615850e-47 |
| Msa0496470 | Msa1359880 | 0.815288 | 9.984048e-52 | -8.615850e-47 |
| Msa0496470 | Msa1368660 | 0.836501 | 9.018013e-57 | -8.615850e-47 |
| Msa0496470 | Msa1381720 | 0.816877 | 4.407761e-52 | -8.615850e-47 |
| Msa0496470 | Msa1388270 | 0.812404 | 4.312890e-51 | -8.615850e-47 |
| Msa0496470 | Msa1393600 | 0.804760 | 1.850696e-49 | -8.615850e-47 |
| Msa0496470 | Msa1395360 | 0.825753 | 3.947874e-54 | -8.615850e-47 |
| Msa0496470 | Msa1401000 | 0.819355 | 1.213219e-52 | -8.615850e-47 |
| Msa0496470 | Msa1407200 | 0.823529 | 1.319098e-53 | -8.615850e-47 |
| Msa0496470 | Msa1409050 | 0.828352 | 9.428027e-55 | -8.615850e-47 |
| Msa0496470 | Msa1409760 | 0.827423 | 1.577533e-54 | -8.615850e-47 |
| Msa0496470 | Msa1414560 | 0.839919 | 1.187868e-57 | -8.615850e-47 |
| Msa0496470 | Msa1427180 | 0.849664 | 2.797291e-60 | -8.615850e-47 |
| Msa0496470 | Msa1432250 | 0.811881 | 5.607464e-51 | -8.615850e-47 |
| Msa0496470 | Msa1433380 | 0.837721 | 4.396643e-57 | -8.615850e-47 |
| Msa0496470 | Msa1443440 | 0.804681 | 1.922288e-49 | -8.615850e-47 |
| Msa0496470 | Msa1445700 | 0.843205 | 1.616344e-58 | -8.615850e-47 |
| Msa0496470 | Msa1446220 | 0.840389 | 8.955432e-58 | -8.615850e-47 |
| Msa0496470 | Msa1450850 | 0.801866 | 7.355909e-49 | -8.615850e-47 |
| Msa0496470 | Msa1452200 | 0.821758 | 3.405617e-53 | -8.615850e-47 |
| Msa0496470 | Msa1454320 | 0.817776 | 2.767041e-52 | -8.615850e-47 |
| Msa0496470 | Msa1454330 | 0.827382 | 1.613469e-54 | -8.615850e-47 |
| Msa0496470 | Msa1454940 | 0.811593 | 6.478125e-51 | -8.615850e-47 |
| Msa0496470 | Msa1459630 | 0.832904 | 7.241619e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496470 | MtrunA17_Chr3g0090521 | 95.492 | 488 | 22 | 0 | 1 | 488 | 1 | 488 | 0.0 | 964 |
| Msa0496470 | MtrunA17_Chr8g0372991 | 29.032 | 372 | 209 | 12 | 95 | 456 | 45 | 371 | 1.98e-31 | 124 |
| Msa0496470 | MtrunA17_Chr5g0423381 | 24.923 | 325 | 206 | 9 | 133 | 457 | 61 | 347 | 1.99e-24 | 104 |
| Msa0496470 | MtrunA17_Chr1g0188361 | 24.781 | 343 | 194 | 13 | 129 | 450 | 91 | 390 | 1.03e-20 | 94.0 |
| Msa0496470 | MtrunA17_Chr4g0018641 | 25.938 | 320 | 179 | 10 | 139 | 452 | 411 | 678 | 1.14e-19 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496470 | AT5G13800.3 | 69.212 | 419 | 121 | 5 | 66 | 479 | 53 | 468 | 0.0 | 600 |
| Msa0496470 | AT5G13800.2 | 69.212 | 419 | 121 | 5 | 66 | 479 | 30 | 445 | 0.0 | 599 |
| Msa0496470 | AT5G13800.1 | 69.212 | 419 | 121 | 5 | 66 | 479 | 30 | 445 | 0.0 | 599 |
| Msa0496470 | AT5G13800.4 | 70.745 | 376 | 104 | 4 | 66 | 438 | 30 | 402 | 0.0 | 556 |
| Msa0496470 | AT4G36530.1 | 29.942 | 344 | 189 | 12 | 116 | 447 | 2 | 305 | 4.57e-28 | 114 |
| Msa0496470 | AT4G36530.2 | 29.942 | 344 | 189 | 12 | 116 | 447 | 59 | 362 | 1.24e-27 | 114 |
| Msa0496470 | AT5G19850.1 | 25.301 | 332 | 209 | 10 | 116 | 447 | 64 | 356 | 5.02e-23 | 100 |
| Msa0496470 | AT4G25290.1 | 26.444 | 329 | 177 | 11 | 133 | 453 | 402 | 673 | 6.35e-18 | 87.4 |
Find 178 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTACACAACACATATTT+TGG | 0.112509 | 3_4:-27256949 | Msa0496470:three_prime_UTR |
| ACAAATAATTGCAAGATAAA+TGG | 0.152678 | 3_4:+27257296 | None:intergenic |
| ACACTTAAACGAACATTTCT+AGG | 0.161206 | 3_4:-27257530 | Msa0496470:three_prime_UTR |
| TTGTGTATTCGGTTGATTTA+TGG | 0.184371 | 3_4:-27259799 | Msa0496470:CDS |
| CACTAAAAGACTCAAATTTA+AGG | 0.189165 | 3_4:-27260263 | Msa0496470:CDS |
| TCATAATGAACATTCAATTT+AGG | 0.203184 | 3_4:+27260079 | None:intergenic |
| GAAAAGGGTCATCAACAAAA+TGG | 0.210823 | 3_4:-27260313 | Msa0496470:CDS |
| CTAACTCTCTTTCAATAGTT+TGG | 0.243271 | 3_4:+27257803 | None:intergenic |
| ATCAATAATCTTTACACAAT+TGG | 0.245251 | 3_4:-27260352 | Msa0496470:CDS |
| CATTCAATTAATGATGTATA+TGG | 0.247704 | 3_4:+27256887 | None:intergenic |
| AGTTATGGTGATTATGTTAT+TGG | 0.253348 | 3_4:-27260229 | Msa0496470:CDS |
| GAATCGTAATTGGCAGATTC+AGG | 0.254674 | 3_4:+27257358 | None:intergenic |
| GTTAATATTGAGGCTATATA+AGG | 0.267351 | 3_4:-27257736 | Msa0496470:exon |
| TATGGGGACTTCAGGTTAAA+AGG | 0.267598 | 3_4:-27258394 | Msa0496470:CDS |
| AATGTTTCGCCTTGGGGTTT+TGG | 0.273427 | 3_4:-27259851 | Msa0496470:CDS |
| ATCCTTGGGTGACACCTATA+TGG | 0.274359 | 3_4:-27258412 | Msa0496470:CDS |
| GAGAAGCAGCTGATGGATTT+AGG | 0.281263 | 3_4:-27259980 | Msa0496470:CDS |
| TCAGCCTTACCATGAATTCT+TGG | 0.282592 | 3_4:+27257432 | None:intergenic |
| GCAGGGCTGATTTGATAATA+AGG | 0.317228 | 3_4:+27258356 | None:intergenic |
| CAAAGGTTTGTCCGCAAGAT+TGG | 0.319897 | 3_4:+27257152 | None:intergenic |
| CACACCGAAACAATTTATAT+TGG | 0.328149 | 3_4:+27257015 | None:intergenic |
| GTCAGTTTCTTTATATTTGA+AGG | 0.331884 | 3_4:+27259031 | None:intergenic |
| ATTTGATAATAAGGAGCTTC+AGG | 0.341340 | 3_4:+27258365 | None:intergenic |
| AATAAAATTCCAAGAATTCA+TGG | 0.348072 | 3_4:-27257441 | Msa0496470:three_prime_UTR |
| CTCAAATTTAAGGTTAATAG+TGG | 0.351895 | 3_4:-27260253 | Msa0496470:CDS |
| GATGAAGGAAGAGATATTGT+AGG | 0.356457 | 3_4:-27260202 | Msa0496470:CDS |
| GAGTGGAAATGTTTCGCCTT+GGG | 0.357128 | 3_4:-27259858 | Msa0496470:CDS |
| GGCGACTGAGCTTGTGTATT+CGG | 0.358843 | 3_4:-27259810 | Msa0496470:CDS |
| AGATCCTGCTCCTTTGTCTA+AGG | 0.359553 | 3_4:-27259897 | Msa0496470:CDS |
| CCGAAACAATTTATATTGGC+TGG | 0.369052 | 3_4:+27257019 | None:intergenic |
| GCTCCTTTGTCTAAGGTAGA+AGG | 0.380700 | 3_4:-27259890 | Msa0496470:CDS |
| CCAGCCAATATAAATTGTTT+CGG | 0.384546 | 3_4:-27257019 | Msa0496470:three_prime_UTR |
| AGAACATAGTTGCTAAGAAA+TGG | 0.393122 | 3_4:-27260500 | Msa0496470:exon |
| GAAATGGAAACTCTTTCATA+TGG | 0.395108 | 3_4:-27260484 | Msa0496470:CDS |
| GCTGAAGGATAATTCTCCTT+GGG | 0.395504 | 3_4:+27258577 | None:intergenic |
| TACTCTTAATCAGTTTCAAA+TGG | 0.398144 | 3_4:+27256984 | None:intergenic |
| TCAATAATCTTTACACAATT+GGG | 0.398675 | 3_4:-27260351 | Msa0496470:CDS |
| AATATCATGTAAGATGTTGT+TGG | 0.401386 | 3_4:-27256754 | Msa0496470:three_prime_UTR |
| GTCATAAATTTCTTACTTCG+TGG | 0.404663 | 3_4:-27257895 | Msa0496470:CDS |
| GGACAACCCCTGTGCTCATT+CGG | 0.406801 | 3_4:+27257318 | None:intergenic |
| CAAATAATTGCAAGATAAAT+GGG | 0.406951 | 3_4:+27257297 | None:intergenic |
| CGCTGAAGGATAATTCTCCT+TGG | 0.410914 | 3_4:+27258576 | None:intergenic |
| GACACCTATATGGGGACTTC+AGG | 0.417003 | 3_4:-27258402 | Msa0496470:CDS |
| TTCGGGATGCTAATGGTAGA+TGG | 0.418475 | 3_4:+27257127 | None:intergenic |
| GTCATCAACAAAATGGGTTT+AGG | 0.419697 | 3_4:-27260306 | Msa0496470:CDS |
| GCAAATGAGGCTGCAGCAGC+AGG | 0.429355 | 3_4:+27258617 | None:intergenic |
| CTCCTCTTTGATGACATCTC+TGG | 0.429599 | 3_4:+27257497 | None:intergenic |
| TTAACCTGAAGTCCCCATAT+AGG | 0.431257 | 3_4:+27258398 | None:intergenic |
| CTCCTTTGTCTAAGGTAGAA+GGG | 0.432227 | 3_4:-27259889 | Msa0496470:CDS |
| TTAATATTGAGGCTATATAA+GGG | 0.435336 | 3_4:-27257735 | Msa0496470:exon |
| TCCTTGGGTGACACCTATAT+GGG | 0.437100 | 3_4:-27258411 | Msa0496470:CDS |
| ATGAAGGAAGAGATATTGTA+GGG | 0.437799 | 3_4:-27260201 | Msa0496470:CDS |
| GGGATGTGGAGGCCTACTTC+GGG | 0.441144 | 3_4:+27257110 | None:intergenic |
| TGTATGGAAAAGAAGATCCT+TGG | 0.446455 | 3_4:-27258427 | Msa0496470:CDS |
| CGGGATGTGGAGGCCTACTT+CGG | 0.447509 | 3_4:+27257109 | None:intergenic |
| GATGAATCTAACGGTGAATC+CGG | 0.449227 | 3_4:-27260136 | Msa0496470:CDS |
| TCATGAGGGCAGTGACCAGC+AGG | 0.450163 | 3_4:+27258338 | None:intergenic |
| ATTTATGGCAAGATCAAGTT+CGG | 0.451015 | 3_4:-27259784 | Msa0496470:CDS |
| AAGGTTAATAGTGGAAGTTA+TGG | 0.452518 | 3_4:-27260244 | Msa0496470:CDS |
| TTCTTTATATTTGAAGGTAG+AGG | 0.455798 | 3_4:+27259037 | None:intergenic |
| GGTGAACCAGTCTATATTGT+AGG | 0.458199 | 3_4:-27259220 | Msa0496470:CDS |
| TTTCCATACATGAGGCAAAT+CGG | 0.458829 | 3_4:+27258440 | None:intergenic |
| CGAGTGGAAATGTTTCGCCT+TGG | 0.459293 | 3_4:-27259859 | Msa0496470:CDS |
| GTGCCGATTTGCCTCATGTA+TGG | 0.462283 | 3_4:-27258443 | Msa0496470:CDS |
| GTTTGAATTCAACTCAATCA+AGG | 0.466524 | 3_4:-27260408 | Msa0496470:CDS |
| TAAATTTCTTACTTCGTGGA+TGG | 0.469086 | 3_4:-27257891 | Msa0496470:CDS |
| AATGGAGATCGCTCGGGATG+TGG | 0.470202 | 3_4:+27257096 | None:intergenic |
| GGCCTACTTCGGGATGCTAA+TGG | 0.472436 | 3_4:+27257120 | None:intergenic |
| AAGCTCAGTCGCCCACGGTT+CGG | 0.472964 | 3_4:+27259820 | None:intergenic |
| TATGTACCTTGGTCTAGAGT+TGG | 0.473264 | 3_4:+27257208 | None:intergenic |
| AAAAGGGTCATCAACAAAAT+GGG | 0.477906 | 3_4:-27260312 | Msa0496470:CDS |
| ACCTTGGTCTAGAGTTGGCT+TGG | 0.478134 | 3_4:+27257213 | None:intergenic |
| GTTACACCTTTCACTAAATG+AGG | 0.478531 | 3_4:+27259151 | None:intergenic |
| GACTTGCCAAAGTATTTCCA+TGG | 0.484178 | 3_4:-27259072 | Msa0496470:CDS |
| TCCGGCCCATGGAAATACTT+TGG | 0.486998 | 3_4:+27259066 | None:intergenic |
| GGTTGATGTACCTGCTTCAA+AGG | 0.488420 | 3_4:-27260179 | Msa0496470:CDS |
| CCAAATCCAGTAAAATCTCC+TGG | 0.491222 | 3_4:-27259094 | Msa0496470:CDS |
| TATTATCAAATCAGCCCTGC+TGG | 0.491907 | 3_4:-27258353 | Msa0496470:CDS |
| TATTCATTAAATGATGTATG+TGG | 0.494312 | 3_4:-27256923 | Msa0496470:three_prime_UTR |
| TGAAGGTAGAGGGAATGTTC+CGG | 0.494970 | 3_4:+27259048 | None:intergenic |
| TGAATACGCCGAATGAGCAC+AGG | 0.502692 | 3_4:-27257326 | Msa0496470:three_prime_UTR |
| ACAAATTTGTTACAGGTCAT+CGG | 0.503439 | 3_4:-27259241 | Msa0496470:intron |
| CGCAGATCATTCCATAAATG+TGG | 0.503615 | 3_4:-27258678 | Msa0496470:CDS |
| GCCAAAGTATTTCCATGGGC+CGG | 0.503917 | 3_4:-27259067 | Msa0496470:CDS |
| CCTTGATAATGTTTCGCTGA+AGG | 0.506677 | 3_4:+27258562 | None:intergenic |
| GTATGGAAAAGAAGATCCTT+GGG | 0.512378 | 3_4:-27258426 | Msa0496470:CDS |
| GACTATTGAGCTCACTAGGA+GGG | 0.512591 | 3_4:-27257475 | Msa0496470:three_prime_UTR |
| TCTTTATATTTGAAGGTAGA+GGG | 0.516316 | 3_4:+27259038 | None:intergenic |
| AATTATACACGTTAATATTG+AGG | 0.517297 | 3_4:-27257746 | Msa0496470:CDS |
| TATGTTATTGGTGAAGATGA+AGG | 0.519558 | 3_4:-27260217 | Msa0496470:CDS |
| GGAAATACTTTGGCAAGTCC+AGG | 0.521700 | 3_4:+27259076 | None:intergenic |
| AGAGGGAATGTTCCGGCCCA+TGG | 0.525112 | 3_4:+27259055 | None:intergenic |
| CAAAGAGAATGGAGATCGCT+CGG | 0.525647 | 3_4:+27257089 | None:intergenic |
| GTCATCTAATGTGGGACGGA+GGG | 0.528762 | 3_4:-27256617 | Msa0496470:three_prime_UTR |
| AAAGGAGCAGGATCTTCAAA+AGG | 0.528883 | 3_4:+27259905 | None:intergenic |
| ATTCATGGTAAGGCTGAAGT+TGG | 0.528984 | 3_4:-27257426 | Msa0496470:three_prime_UTR |
| TCAATTATGTTTGCTCCCCA+AGG | 0.529087 | 3_4:-27258593 | Msa0496470:CDS |
| ATCAACTAGGTCATCTAATG+TGG | 0.530908 | 3_4:-27256626 | Msa0496470:three_prime_UTR |
| AAACATAATTGAAGCAAATG+AGG | 0.531154 | 3_4:+27258604 | None:intergenic |
| CAAAGATAAAACATATGCAT+TGG | 0.531450 | 3_4:-27256662 | Msa0496470:three_prime_UTR |
| AGAGAGAGCCATCAGACTCT+AGG | 0.533108 | 3_4:+27257860 | None:intergenic |
| GATTCACCGTTAGATTCATC+CGG | 0.533130 | 3_4:+27260139 | None:intergenic |
| AAGGCAACAGAAGTGCTGAT+TGG | 0.533885 | 3_4:+27257399 | None:intergenic |
| CCTTCAGCGAAACATTATCA+AGG | 0.535892 | 3_4:-27258562 | Msa0496470:intron |
| ATCAAGTGATTAATCGACTT+CGG | 0.537049 | 3_4:-27257648 | Msa0496470:three_prime_UTR |
| TGCTCTTCATGCAGAGATGT+GGG | 0.538996 | 3_4:+27257184 | None:intergenic |
| ATGCTCTTCATGCAGAGATG+TGG | 0.540602 | 3_4:+27257183 | None:intergenic |
| CTAGAGTTGGCTTGGAGAGA+CGG | 0.541610 | 3_4:+27257221 | None:intergenic |
| CTCAAAGTTGCTTATTGACA+TGG | 0.542492 | 3_4:+27257271 | None:intergenic |
| AATGTTCATTATGAGAAAGC+TGG | 0.544928 | 3_4:-27260070 | Msa0496470:CDS |
| AGGAGACTATTGAGCTCACT+AGG | 0.545584 | 3_4:-27257479 | Msa0496470:three_prime_UTR |
| TGCTATCCTCATTTAGTGAA+AGG | 0.545914 | 3_4:-27259157 | Msa0496470:CDS |
| TCATTATGAGAAGCAGCTGA+TGG | 0.547861 | 3_4:-27259987 | Msa0496470:CDS |
| AGTGGAAATGTTTCGCCTTG+GGG | 0.549038 | 3_4:-27259857 | Msa0496470:CDS |
| GGGACTTCAGGTTAAAAGGA+AGG | 0.555835 | 3_4:-27258390 | Msa0496470:CDS |
| TACCATTAGCATCCCGAAGT+AGG | 0.560571 | 3_4:-27257122 | Msa0496470:three_prime_UTR |
| AGTTTGATCCATCCCTCTTG+AGG | 0.560705 | 3_4:-27257048 | Msa0496470:three_prime_UTR |
| ACCCCTTCTACCTTAGACAA+AGG | 0.561060 | 3_4:+27259887 | None:intergenic |
| GATGGAGCGTGCAAAGAGAA+TGG | 0.561488 | 3_4:+27257078 | None:intergenic |
| GGAAATATCCTCAAGAGGGA+TGG | 0.561845 | 3_4:+27257040 | None:intergenic |
| TGCAGCAGCAGGATGTCTTG+TGG | 0.564810 | 3_4:+27258628 | None:intergenic |
| TCCTTTGTCTAAGGTAGAAG+GGG | 0.565381 | 3_4:-27259888 | Msa0496470:CDS |
| AATTCCAAGAATTCATGGTA+AGG | 0.568355 | 3_4:-27257436 | Msa0496470:three_prime_UTR |
| GAAAGCTGGTTGTGAAAATG+TGG | 0.570001 | 3_4:-27260056 | Msa0496470:CDS |
| TGGATCAAACTCAATTGTGA+TGG | 0.572331 | 3_4:+27257060 | None:intergenic |
| GGAATCAAAACCTTTGAAGC+AGG | 0.573711 | 3_4:+27260169 | None:intergenic |
| AAAGAACCAACACCGAAACC+CGG | 0.578498 | 3_4:+27260010 | None:intergenic |
| TATAAAGAAACTGACAGAGT+TGG | 0.579225 | 3_4:-27259023 | Msa0496470:CDS |
| GTTCATCACACTTTGAGAGA+AGG | 0.579524 | 3_4:+27257380 | None:intergenic |
| TGGAGATGAAACCGAACCGT+GGG | 0.590049 | 3_4:-27259831 | Msa0496470:CDS |
| AAAGAGAATGGAGATCGCTC+GGG | 0.590090 | 3_4:+27257090 | None:intergenic |
| GAATTGCCTACAATATAGAC+TGG | 0.590145 | 3_4:+27259214 | None:intergenic |
| GTGTCTATTTCTTCAAGCAG+AGG | 0.590583 | 3_4:+27257832 | None:intergenic |
| AGTTCGGTACTTCATTGAAG+AGG | 0.593978 | 3_4:-27259768 | Msa0496470:intron |
| GGCTGGAAATATCCTCAAGA+GGG | 0.593979 | 3_4:+27257036 | None:intergenic |
| GGAGATCGCTCGGGATGTGG+AGG | 0.594063 | 3_4:+27257099 | None:intergenic |
| TTAGATTCATCCGGTAAACC+AGG | 0.594608 | 3_4:+27260148 | None:intergenic |
| GCTAATGGTAGATGGATCAA+AGG | 0.596502 | 3_4:+27257135 | None:intergenic |
| GAATACGCCGAATGAGCACA+GGG | 0.597473 | 3_4:-27257325 | Msa0496470:three_prime_UTR |
| CTCCAGAGATGTCATCAAAG+AGG | 0.598418 | 3_4:-27257499 | Msa0496470:three_prime_UTR |
| TCTACCTTAGACAAAGGAGC+AGG | 0.601953 | 3_4:+27259893 | None:intergenic |
| CATCACAAGCGCCAATCTTG+CGG | 0.603601 | 3_4:-27257163 | Msa0496470:three_prime_UTR |
| ACCTCAGGGACTTCGTCATG+AGG | 0.613786 | 3_4:+27258323 | None:intergenic |
| TCAACTAGGTCATCTAATGT+GGG | 0.614583 | 3_4:-27256625 | Msa0496470:three_prime_UTR |
| CCTCAGGGACTTCGTCATGA+GGG | 0.615846 | 3_4:+27258324 | None:intergenic |
| GTAGAAGGGGTTATGTCGAG+TGG | 0.616320 | 3_4:-27259875 | Msa0496470:CDS |
| ACAACTACTTATCACCGCAC+CGG | 0.616475 | 3_4:+27260117 | None:intergenic |
| TGGCTGGAAATATCCTCAAG+AGG | 0.619018 | 3_4:+27257035 | None:intergenic |
| GAGATGTGGGGTATGTACCT+TGG | 0.623830 | 3_4:+27257197 | None:intergenic |
| ACTTGCCAAAGTATTTCCAT+GGG | 0.623837 | 3_4:-27259071 | Msa0496470:CDS |
| GGTCATCTAATGTGGGACGG+AGG | 0.624886 | 3_4:-27256618 | Msa0496470:three_prime_UTR |
| ATTAGAAACCTAGAGTCTGA+TGG | 0.625268 | 3_4:-27257868 | Msa0496470:CDS |
| ACTATTGAGCTCACTAGGAG+GGG | 0.626318 | 3_4:-27257474 | Msa0496470:three_prime_UTR |
| ATTGTAGGCAATTCACTAGG+AGG | 0.628400 | 3_4:-27259205 | Msa0496470:CDS |
| TAATATTGAGGCTATATAAG+GGG | 0.631977 | 3_4:-27257734 | Msa0496470:exon |
| GTTTCATCTCCAAAACCCCA+AGG | 0.634038 | 3_4:+27259842 | None:intergenic |
| TACACAAGCTCAGTCGCCCA+CGG | 0.634556 | 3_4:+27259815 | None:intergenic |
| CTAGGTCATCTAATGTGGGA+CGG | 0.636938 | 3_4:-27256621 | Msa0496470:three_prime_UTR |
| CCCCATATAGGTGTCACCCA+AGG | 0.637101 | 3_4:+27258410 | None:intergenic |
| TTGGAGATGAAACCGAACCG+TGG | 0.642794 | 3_4:-27259832 | Msa0496470:CDS |
| TGTCATCTATTGAGAGACGG+AGG | 0.644261 | 3_4:+27256847 | None:intergenic |
| ATATGTCATCTATTGAGAGA+CGG | 0.645508 | 3_4:+27256844 | None:intergenic |
| TATATTGTAGGCAATTCACT+AGG | 0.646604 | 3_4:-27259208 | Msa0496470:CDS |
| GTCATCTATTGAGAGACGGA+GGG | 0.647747 | 3_4:+27256848 | None:intergenic |
| GTGTTCATAACTTGACAACA+TGG | 0.649898 | 3_4:+27260454 | None:intergenic |
| CCCTCATGACGAAGTCCCTG+AGG | 0.650741 | 3_4:-27258324 | Msa0496470:intron |
| CTGAAGGATAATTCTCCTTG+GGG | 0.654826 | 3_4:+27258578 | None:intergenic |
| TGAAGGAAGAGATATTGTAG+GGG | 0.662501 | 3_4:-27260200 | Msa0496470:CDS |
| GGTTTACCGGATGAATCTAA+CGG | 0.662912 | 3_4:-27260145 | Msa0496470:CDS |
| TACATGTGTCGAAATCAACT+AGG | 0.665214 | 3_4:-27256639 | Msa0496470:three_prime_UTR |
| CATGAGGGCAGTGACCAGCA+GGG | 0.666303 | 3_4:+27258339 | None:intergenic |
| AGACTATTGAGCTCACTAGG+AGG | 0.666771 | 3_4:-27257476 | Msa0496470:three_prime_UTR |
| CACTAAATGAGGATAGCATG+CGG | 0.675326 | 3_4:+27259162 | None:intergenic |
| TCCAAGCCAACTCTAGACCA+AGG | 0.686256 | 3_4:-27257214 | Msa0496470:three_prime_UTR |
| CCTTGGGTGACACCTATATG+GGG | 0.695951 | 3_4:-27258410 | Msa0496470:CDS |
| GCTCTTCATGCAGAGATGTG+GGG | 0.705069 | 3_4:+27257185 | None:intergenic |
| ATCTAACGGTGAATCCGGTG+CGG | 0.719969 | 3_4:-27260131 | Msa0496470:CDS |
| AATACGCCGAATGAGCACAG+GGG | 0.789859 | 3_4:-27257324 | Msa0496470:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTTATATTAGAAAAAA+TGG | - | chr3_4:27256759-27256778 | Msa0496470:three_prime_UTR | 10.0% |
| !!! | ATATTTTGGATTTTTTTTTT+TGG | - | chr3_4:27259555-27259574 | Msa0496470:intron | 10.0% |
| !! | TCTAAAAAAGAAAATTCATT+TGG | - | chr3_4:27257548-27257567 | Msa0496470:three_prime_UTR | 15.0% |
| !!! | TTATTATACAAATTTGTTAC+AGG | - | chr3_4:27257896-27257915 | Msa0496470:CDS | 15.0% |
| !!! | ACATATTTTAACACATATTT+TGG | - | chr3_4:27259541-27259560 | Msa0496470:intron | 15.0% |
| !! | TGTGAATTAGTATAAAAATA+TGG | + | chr3_4:27260361-27260380 | None:intergenic | 15.0% |
| !! | TCTTATATTAGAAAAAATGG+AGG | - | chr3_4:27256762-27256781 | Msa0496470:three_prime_UTR | 20.0% |
| !! | ATCAATAATCTTTACACAAT+TGG | - | chr3_4:27256792-27256811 | Msa0496470:three_prime_UTR | 20.0% |
| !! | TCAATAATCTTTACACAATT+GGG | - | chr3_4:27256793-27256812 | Msa0496470:three_prime_UTR | 20.0% |
| !!! | TCATTGAGATTTTATGAAAA+GGG | - | chr3_4:27256816-27256835 | Msa0496470:three_prime_UTR | 20.0% |
| !! | TCATAATGAACATTCAATTT+AGG | + | chr3_4:27257068-27257087 | None:intergenic | 20.0% |
| !!! | AAAAAAATCTAAAACCACAT+AGG | + | chr3_4:27257504-27257523 | None:intergenic | 20.0% |
| !! | CTAAAATACTAAATCATATC+AGG | + | chr3_4:27258195-27258214 | None:intergenic | 20.0% |
| !! | AAATTGAATAGATGTGATAA+GGG | + | chr3_4:27258361-27258380 | None:intergenic | 20.0% |
| !! | AAAATTGAATAGATGTGATA+AGG | + | chr3_4:27258362-27258381 | None:intergenic | 20.0% |
| !! | GAAACAAATTAATAAGAATC+AGG | + | chr3_4:27258386-27258405 | None:intergenic | 20.0% |
| !!! | CTTATTAATTTGTTTCCTAT+AGG | - | chr3_4:27258390-27258409 | Msa0496470:CDS | 20.0% |
| !! | CTTATATGATCTTAGAATTT+CGG | + | chr3_4:27259017-27259036 | None:intergenic | 20.0% |
| !! | AATTATACACGTTAATATTG+AGG | - | chr3_4:27259398-27259417 | Msa0496470:intron | 20.0% |
| !! | TTAATATTGAGGCTATATAA+GGG | - | chr3_4:27259409-27259428 | Msa0496470:intron | 20.0% |
| !!! | TTCTTGGAATTTTATTCTTT+TGG | + | chr3_4:27259699-27259718 | None:intergenic | 20.0% |
| !! | AATAAAATTCCAAGAATTCA+TGG | - | chr3_4:27259703-27259722 | Msa0496470:intron | 20.0% |
| !!! | AAAACATTTTGAATCGTAAT+TGG | + | chr3_4:27259799-27259818 | None:intergenic | 20.0% |
| !! | CAAATAATTGCAAGATAAAT+GGG | + | chr3_4:27259850-27259869 | None:intergenic | 20.0% |
| !! | ACAAATAATTGCAAGATAAA+TGG | + | chr3_4:27259851-27259870 | None:intergenic | 20.0% |
| !! | TATTCATTAAATGATGTATG+TGG | - | chr3_4:27260221-27260240 | Msa0496470:CDS | 20.0% |
| !! | CATTCAATTAATGATGTATA+TGG | + | chr3_4:27260260-27260279 | None:intergenic | 20.0% |
| !! | GTCATTGAGATTTTATGAAA+AGG | - | chr3_4:27256815-27256834 | Msa0496470:three_prime_UTR | 25.0% |
| ! | CACTAAAAGACTCAAATTTA+AGG | - | chr3_4:27256881-27256900 | Msa0496470:three_prime_UTR | 25.0% |
| !! | CTCAAATTTAAGGTTAATAG+TGG | - | chr3_4:27256891-27256910 | Msa0496470:three_prime_UTR | 25.0% |
| ! | AGTTATGGTGATTATGTTAT+TGG | - | chr3_4:27256915-27256934 | Msa0496470:three_prime_UTR | 25.0% |
| !!! | GTGATAAGTAGTTGTTTTAA+GGG | - | chr3_4:27257035-27257054 | Msa0496470:three_prime_UTR | 25.0% |
| !!! | ACCAAATGTTTTATTTTTGC+CGG | - | chr3_4:27257115-27257134 | Msa0496470:three_prime_UTR | 25.0% |
| ! | TATACTATTTGAGCAAACAA+TGG | + | chr3_4:27257450-27257469 | None:intergenic | 25.0% |
| !!! | TTTTTTCTAACAACTTATGC+TGG | - | chr3_4:27257518-27257537 | Msa0496470:three_prime_UTR | 25.0% |
| ! | TCTTTATATTTGAAGGTAGA+GGG | + | chr3_4:27258109-27258128 | None:intergenic | 25.0% |
| ! | TTCTTTATATTTGAAGGTAG+AGG | + | chr3_4:27258110-27258129 | None:intergenic | 25.0% |
| ! | GTCAGTTTCTTTATATTTGA+AGG | + | chr3_4:27258116-27258135 | None:intergenic | 25.0% |
| ! | TTTAGTTGCAAACTTCTAAT+TGG | - | chr3_4:27258210-27258229 | Msa0496470:intron | 25.0% |
| ! | TAATGGAATAGATGTGATAA+GGG | + | chr3_4:27258336-27258355 | None:intergenic | 25.0% |
| ! | TTAATGGAATAGATGTGATA+AGG | + | chr3_4:27258337-27258356 | None:intergenic | 25.0% |
| !!! | ATTAATTTGTTTCCTATAGG+TGG | - | chr3_4:27258393-27258412 | Msa0496470:CDS | 25.0% |
| !!! | TTAATTTGTTTCCTATAGGT+GGG | - | chr3_4:27258394-27258413 | Msa0496470:CDS | 25.0% |
| ! | AAAAACGTTATCCACATTTA+TGG | + | chr3_4:27258480-27258499 | None:intergenic | 25.0% |
| ! | AAACATAATTGAAGCAAATG+AGG | + | chr3_4:27258543-27258562 | None:intergenic | 25.0% |
| ! | CAATTGCTAACTAATTAACT+TGG | - | chr3_4:27258847-27258866 | Msa0496470:intron | 25.0% |
| ! | TCATAAAGAACTAAACAATG+AGG | + | chr3_4:27259184-27259203 | None:intergenic | 25.0% |
| !!! | GTCCAATTTTATTTATTTGC+AGG | - | chr3_4:27259227-27259246 | Msa0496470:CDS | 25.0% |
| ! | GACCTGCAAATAAATAAAAT+TGG | + | chr3_4:27259232-27259251 | None:intergenic | 25.0% |
| ! | GTTAATATTGAGGCTATATA+AGG | - | chr3_4:27259408-27259427 | Msa0496470:intron | 25.0% |
| ! | TAATATTGAGGCTATATAAG+GGG | - | chr3_4:27259410-27259429 | Msa0496470:intron | 25.0% |
| !!! | TTTTTTTTTTGGTACAAGAG+AGG | - | chr3_4:27259566-27259585 | Msa0496470:intron | 25.0% |
| !!! | TTTTTTTTTGGTACAAGAGA+GGG | - | chr3_4:27259567-27259586 | Msa0496470:intron | 25.0% |
| !!! | AGTGTTTAGTTTTCTCTTTT+GGG | + | chr3_4:27259599-27259618 | None:intergenic | 25.0% |
| !!! | AAGTGTTTAGTTTTCTCTTT+TGG | + | chr3_4:27259600-27259619 | None:intergenic | 25.0% |
| ! | TACTCTTAATCAGTTTCAAA+TGG | + | chr3_4:27260163-27260182 | None:intergenic | 25.0% |
| ! | AATATCATGTAAGATGTTGT+TGG | - | chr3_4:27260390-27260409 | Msa0496470:CDS | 25.0% |
| ! | CAAAGATAAAACATATGCAT+TGG | - | chr3_4:27260482-27260501 | Msa0496470:CDS | 25.0% |
| AGAACATAGTTGCTAAGAAA+TGG | - | chr3_4:27256644-27256663 | Msa0496470:three_prime_UTR | 30.0% | |
| GAAATGGAAACTCTTTCATA+TGG | - | chr3_4:27256660-27256679 | Msa0496470:three_prime_UTR | 30.0% | |
| GTTTGAATTCAACTCAATCA+AGG | - | chr3_4:27256736-27256755 | Msa0496470:three_prime_UTR | 30.0% | |
| AAAAGGGTCATCAACAAAAT+GGG | - | chr3_4:27256832-27256851 | Msa0496470:three_prime_UTR | 30.0% | |
| ! | AAGGTTAATAGTGGAAGTTA+TGG | - | chr3_4:27256900-27256919 | Msa0496470:three_prime_UTR | 30.0% |
| TATGTTATTGGTGAAGATGA+AGG | - | chr3_4:27256927-27256946 | Msa0496470:three_prime_UTR | 30.0% | |
| ATGAAGGAAGAGATATTGTA+GGG | - | chr3_4:27256943-27256962 | Msa0496470:three_prime_UTR | 30.0% | |
| !! | GGTGATAAGTAGTTGTTTTA+AGG | - | chr3_4:27257034-27257053 | Msa0496470:three_prime_UTR | 30.0% |
| !!! | TAAGTAGTTGTTTTAAGGGA+TGG | - | chr3_4:27257039-27257058 | Msa0496470:three_prime_UTR | 30.0% |
| AATGTTCATTATGAGAAAGC+TGG | - | chr3_4:27257074-27257093 | Msa0496470:three_prime_UTR | 30.0% | |
| !!! | CCAAATGTTTTATTTTTGCC+GGG | - | chr3_4:27257116-27257135 | Msa0496470:three_prime_UTR | 30.0% |
| ! | TTGTGTATTCGGTTGATTTA+TGG | - | chr3_4:27257345-27257364 | Msa0496470:three_prime_UTR | 30.0% |
| ATTTATGGCAAGATCAAGTT+CGG | - | chr3_4:27257360-27257379 | Msa0496470:three_prime_UTR | 30.0% | |
| ! | GGTAAATAACTTGCATTGTT+TGG | - | chr3_4:27257397-27257416 | Msa0496470:three_prime_UTR | 30.0% |
| TGTTTGCTCAAATAGTATAC+TGG | - | chr3_4:27257451-27257470 | Msa0496470:three_prime_UTR | 30.0% | |
| AGTATACTGGAAAATGTTCT+TGG | - | chr3_4:27257464-27257483 | Msa0496470:three_prime_UTR | 30.0% | |
| ! | TCAAATAAGTCGATTCAAAC+AGG | + | chr3_4:27257574-27257593 | None:intergenic | 30.0% |
| CCTAAAGAGCTTATTGAAAT+AGG | + | chr3_4:27257682-27257701 | None:intergenic | 30.0% | |
| CCTATTTCAATAAGCTCTTT+AGG | - | chr3_4:27257679-27257698 | Msa0496470:three_prime_UTR | 30.0% | |
| !! | ACAAATTTGTTACAGGTCAT+CGG | - | chr3_4:27257903-27257922 | Msa0496470:intron | 30.0% |
| TATATTGTAGGCAATTCACT+AGG | - | chr3_4:27257936-27257955 | Msa0496470:intron | 30.0% | |
| TATAAAGAAACTGACAGAGT+TGG | - | chr3_4:27258121-27258140 | Msa0496470:intron | 30.0% | |
| AATGGAATAGATGTGATAAG+GGG | + | chr3_4:27258335-27258354 | None:intergenic | 30.0% | |
| TAGATGTGATAAGGGTTTAA+TGG | + | chr3_4:27258353-27258372 | None:intergenic | 30.0% | |
| ! | AGTACATCAGCAATACTTTT+CGG | + | chr3_4:27258434-27258453 | None:intergenic | 30.0% |
| TACGTGAATACACATGTTAA+TGG | - | chr3_4:27258639-27258658 | Msa0496470:CDS | 30.0% | |
| ! | ACACATGTTAATGGTTTTTG+CGG | - | chr3_4:27258648-27258667 | Msa0496470:CDS | 30.0% |
| ! | ATTTGATAATAAGGAGCTTC+AGG | + | chr3_4:27258782-27258801 | None:intergenic | 30.0% |
| ! | ACCTTACAAGCTAATTTTGT+AGG | - | chr3_4:27258967-27258986 | Msa0496470:intron | 30.0% |
| ! | CCTTACAAGCTAATTTTGTA+GGG | - | chr3_4:27258968-27258987 | Msa0496470:intron | 30.0% |
| ATGATCTTAGAATTTCGGTT+GGG | + | chr3_4:27259012-27259031 | None:intergenic | 30.0% | |
| TATGATCTTAGAATTTCGGT+TGG | + | chr3_4:27259013-27259032 | None:intergenic | 30.0% | |
| TAAATATTCAGTGCGCAAAA+AGG | + | chr3_4:27259097-27259116 | None:intergenic | 30.0% | |
| AAAGAACTAAACAATGAGGA+AGG | + | chr3_4:27259180-27259199 | None:intergenic | 30.0% | |
| GTCATAAATTTCTTACTTCG+TGG | - | chr3_4:27259249-27259268 | Msa0496470:intron | 30.0% | |
| TAAATTTCTTACTTCGTGGA+TGG | - | chr3_4:27259253-27259272 | Msa0496470:intron | 30.0% | |
| CTAACTCTCTTTCAATAGTT+TGG | + | chr3_4:27259344-27259363 | None:intergenic | 30.0% | |
| ! | ATCAAGTGATTAATCGACTT+CGG | - | chr3_4:27259496-27259515 | Msa0496470:intron | 30.0% |
| ACACTTAAACGAACATTTCT+AGG | - | chr3_4:27259614-27259633 | Msa0496470:intron | 30.0% | |
| AATTCCAAGAATTCATGGTA+AGG | - | chr3_4:27259708-27259727 | Msa0496470:intron | 30.0% | |
| CCAGCCAATATAAATTGTTT+CGG | - | chr3_4:27260125-27260144 | Msa0496470:CDS | 30.0% | |
| CACACCGAAACAATTTATAT+TGG | + | chr3_4:27260132-27260151 | None:intergenic | 30.0% | |
| ! | TCACTACACAACACATATTT+TGG | - | chr3_4:27260195-27260214 | Msa0496470:CDS | 30.0% |
| ATATGTCATCTATTGAGAGA+CGG | + | chr3_4:27260303-27260322 | None:intergenic | 30.0% | |
| GTGTTCATAACTTGACAACA+TGG | + | chr3_4:27256693-27256712 | None:intergenic | 35.0% | |
| GAAAAGGGTCATCAACAAAA+TGG | - | chr3_4:27256831-27256850 | Msa0496470:three_prime_UTR | 35.0% | |
| ! | GTCATCAACAAAATGGGTTT+AGG | - | chr3_4:27256838-27256857 | Msa0496470:three_prime_UTR | 35.0% |
| !! | AGGTCACAAAGTGTTTTTGA+AGG | - | chr3_4:27256858-27256877 | Msa0496470:three_prime_UTR | 35.0% |
| GATGAAGGAAGAGATATTGT+AGG | - | chr3_4:27256942-27256961 | Msa0496470:three_prime_UTR | 35.0% | |
| TGAAGGAAGAGATATTGTAG+GGG | - | chr3_4:27256944-27256963 | Msa0496470:three_prime_UTR | 35.0% | |
| CCCGGCAAAAATAAAACATT+TGG | + | chr3_4:27257119-27257138 | None:intergenic | 35.0% | |
| !!! | GTTTTATTTTTGCCGGGTTT+CGG | - | chr3_4:27257122-27257141 | Msa0496470:three_prime_UTR | 35.0% |
| ! | CAAATTTGCTTGTTCCTATG+TGG | - | chr3_4:27257487-27257506 | Msa0496470:three_prime_UTR | 35.0% |
| ! | TTAAGTTGCGTATCCAAACA+AGG | - | chr3_4:27257766-27257785 | Msa0496470:CDS | 35.0% |
| ! | AATCATCAGCACTCTTTTGA+AGG | - | chr3_4:27257845-27257864 | Msa0496470:CDS | 35.0% |
| GAATTGCCTACAATATAGAC+TGG | + | chr3_4:27257933-27257952 | None:intergenic | 35.0% | |
| TGCTATCCTCATTTAGTGAA+AGG | - | chr3_4:27257987-27258006 | Msa0496470:intron | 35.0% | |
| GTTACACCTTTCACTAAATG+AGG | + | chr3_4:27257996-27258015 | None:intergenic | 35.0% | |
| ! | TGCTTAATGCAACACCTTTT+TGG | - | chr3_4:27258018-27258037 | Msa0496470:intron | 35.0% |
| ! | GCTTAATGCAACACCTTTTT+GGG | - | chr3_4:27258019-27258038 | Msa0496470:intron | 35.0% |
| ! | CTTAATGCAACACCTTTTTG+GGG | - | chr3_4:27258020-27258039 | Msa0496470:intron | 35.0% |
| ! | TTAATGCAACACCTTTTTGG+GGG | - | chr3_4:27258021-27258040 | Msa0496470:intron | 35.0% |
| ! | ACTTGCCAAAGTATTTCCAT+GGG | - | chr3_4:27258073-27258092 | Msa0496470:intron | 35.0% |
| TCGCAAATGAATGACTACAT+CGG | + | chr3_4:27258254-27258273 | None:intergenic | 35.0% | |
| ! | ACTAATTTTCTCCCACCTAT+AGG | + | chr3_4:27258408-27258427 | None:intergenic | 35.0% |
| TTTCCATACATGAGGCAAAT+CGG | + | chr3_4:27258707-27258726 | None:intergenic | 35.0% | |
| ! | GATCTTCTTTTCCATACATG+AGG | + | chr3_4:27258715-27258734 | None:intergenic | 35.0% |
| TGTATGGAAAAGAAGATCCT+TGG | - | chr3_4:27258717-27258736 | Msa0496470:CDS | 35.0% | |
| GTATGGAAAAGAAGATCCTT+GGG | - | chr3_4:27258718-27258737 | Msa0496470:CDS | 35.0% | |
| ATATGTTAAGAGCTGCACAT+TGG | - | chr3_4:27258896-27258915 | Msa0496470:intron | 35.0% | |
| ! | TGCACATTGGATTTGAGATA+GGG | - | chr3_4:27258909-27258928 | Msa0496470:intron | 35.0% |
| CAACTTATAAACTCACATCC+AGG | + | chr3_4:27258935-27258954 | None:intergenic | 35.0% | |
| CTGGATGTGAGTTTATAAGT+TGG | - | chr3_4:27258933-27258952 | Msa0496470:intron | 35.0% | |
| !! | CCCTACAAAATTAGCTTGTA+AGG | + | chr3_4:27258971-27258990 | None:intergenic | 35.0% |
| ! | TTTTGTAGGGTTGAGTTAAG+CGG | - | chr3_4:27258981-27259000 | Msa0496470:intron | 35.0% |
| AATGAGGAAGGAATAACATG+AGG | + | chr3_4:27259168-27259187 | None:intergenic | 35.0% | |
| ATTAGAAACCTAGAGTCTGA+TGG | - | chr3_4:27259276-27259295 | Msa0496470:intron | 35.0% | |
| !! | CATCGATCTGAACTTTTTCT+TGG | + | chr3_4:27259372-27259391 | None:intergenic | 35.0% |
| ! | TAGTTTTCTCTTTTGGGCTT+CGG | + | chr3_4:27259593-27259612 | None:intergenic | 35.0% |
| CTCAAAGTTGCTTATTGACA+TGG | + | chr3_4:27259876-27259895 | None:intergenic | 35.0% | |
| TGGATCAAACTCAATTGTGA+TGG | + | chr3_4:27260087-27260106 | None:intergenic | 35.0% | |
| CCGAAACAATTTATATTGGC+TGG | + | chr3_4:27260128-27260147 | None:intergenic | 35.0% | |
| TACATGTGTCGAAATCAACT+AGG | - | chr3_4:27260505-27260524 | Msa0496470:five_prime_UTR | 35.0% | |
| ATCAACTAGGTCATCTAATG+TGG | - | chr3_4:27260518-27260537 | Msa0496470:five_prime_UTR | 35.0% | |
| TCAACTAGGTCATCTAATGT+GGG | - | chr3_4:27260519-27260538 | Msa0496470:five_prime_UTR | 35.0% | |
| !! | GGAATCAAAACCTTTGAAGC+AGG | + | chr3_4:27256978-27256997 | None:intergenic | 40.0% |
| !!! | GCTTCAAAGGTTTTGATTCC+TGG | - | chr3_4:27256978-27256997 | Msa0496470:three_prime_UTR | 40.0% |
| !!! | GGTTTTGATTCCTGGTTTAC+CGG | - | chr3_4:27256986-27257005 | Msa0496470:three_prime_UTR | 40.0% |
| TTAGATTCATCCGGTAAACC+AGG | + | chr3_4:27256999-27257018 | None:intergenic | 40.0% | |
| GGTTTACCGGATGAATCTAA+CGG | - | chr3_4:27256999-27257018 | Msa0496470:three_prime_UTR | 40.0% | |
| GATTCACCGTTAGATTCATC+CGG | + | chr3_4:27257008-27257027 | None:intergenic | 40.0% | |
| GATGAATCTAACGGTGAATC+CGG | - | chr3_4:27257008-27257027 | Msa0496470:three_prime_UTR | 40.0% | |
| GAAAGCTGGTTGTGAAAATG+TGG | - | chr3_4:27257088-27257107 | Msa0496470:three_prime_UTR | 40.0% | |
| TCATTATGAGAAGCAGCTGA+TGG | - | chr3_4:27257157-27257176 | Msa0496470:three_prime_UTR | 40.0% | |
| ! | TAGGTCGTGATTTTCGTGTT+TGG | - | chr3_4:27257183-27257202 | Msa0496470:three_prime_UTR | 40.0% |
| ! | AGGTCGTGATTTTCGTGTTT+GGG | - | chr3_4:27257184-27257203 | Msa0496470:three_prime_UTR | 40.0% |
| !!! | GTTTGGGCGTTGGATTTTTT+AGG | - | chr3_4:27257200-27257219 | Msa0496470:three_prime_UTR | 40.0% |
| !!! | GCGTTGGATTTTTTAGGACA+AGG | - | chr3_4:27257206-27257225 | Msa0496470:three_prime_UTR | 40.0% |
| AAAGGAGCAGGATCTTCAAA+AGG | + | chr3_4:27257242-27257261 | None:intergenic | 40.0% | |
| ! | CTCCTTTGTCTAAGGTAGAA+GGG | - | chr3_4:27257255-27257274 | Msa0496470:three_prime_UTR | 40.0% |
| ! | TCCTTTGTCTAAGGTAGAAG+GGG | - | chr3_4:27257256-27257275 | Msa0496470:three_prime_UTR | 40.0% |
| AGTTCGGTACTTCATTGAAG+AGG | - | chr3_4:27257376-27257395 | Msa0496470:three_prime_UTR | 40.0% | |
| TTGCGTATCCAAACAAGGTT+AGG | - | chr3_4:27257771-27257790 | Msa0496470:CDS | 40.0% | |
| GGTGAACCAGTCTATATTGT+AGG | - | chr3_4:27257924-27257943 | Msa0496470:intron | 40.0% | |
| ATTGTAGGCAATTCACTAGG+AGG | - | chr3_4:27257939-27257958 | Msa0496470:intron | 40.0% | |
| CACTAAATGAGGATAGCATG+CGG | + | chr3_4:27257985-27258004 | None:intergenic | 40.0% | |
| ! | CCAGGAGATTTTACTGGATT+TGG | + | chr3_4:27258053-27258072 | None:intergenic | 40.0% |
| CCAAATCCAGTAAAATCTCC+TGG | - | chr3_4:27258050-27258069 | Msa0496470:intron | 40.0% | |
| ! | GACTTGCCAAAGTATTTCCA+TGG | - | chr3_4:27258072-27258091 | Msa0496470:intron | 40.0% |
| !! | TGACAGAGTTGGTGTAAGTA+TGG | - | chr3_4:27258132-27258151 | Msa0496470:intron | 40.0% |
| CGCAGATCATTCCATAAATG+TGG | - | chr3_4:27258466-27258485 | Msa0496470:intron | 40.0% | |
| TCAATTATGTTTGCTCCCCA+AGG | - | chr3_4:27258551-27258570 | Msa0496470:intron | 40.0% | |
| CTGAAGGATAATTCTCCTTG+GGG | + | chr3_4:27258569-27258588 | None:intergenic | 40.0% | |
| GCTGAAGGATAATTCTCCTT+GGG | + | chr3_4:27258570-27258589 | None:intergenic | 40.0% | |
| !! | CCTTGATAATGTTTCGCTGA+AGG | + | chr3_4:27258585-27258604 | None:intergenic | 40.0% |
| CCTTCAGCGAAACATTATCA+AGG | - | chr3_4:27258582-27258601 | Msa0496470:CDS | 40.0% | |
| ! | TTTTAGATGTCGAGCGAACA+AGG | - | chr3_4:27258679-27258698 | Msa0496470:CDS | 40.0% |
| TTAACCTGAAGTCCCCATAT+AGG | + | chr3_4:27258749-27258768 | None:intergenic | 40.0% | |
| ! | TATGGGGACTTCAGGTTAAA+AGG | - | chr3_4:27258750-27258769 | Msa0496470:intron | 40.0% |
| !! | GCAGGGCTGATTTGATAATA+AGG | + | chr3_4:27258791-27258810 | None:intergenic | 40.0% |
| TATTATCAAATCAGCCCTGC+TGG | - | chr3_4:27258791-27258810 | Msa0496470:intron | 40.0% | |
| GTTAGCAATTGCATACCTCA+GGG | + | chr3_4:27258838-27258857 | None:intergenic | 40.0% | |
| AGTTAGCAATTGCATACCTC+AGG | + | chr3_4:27258839-27258858 | None:intergenic | 40.0% | |
| ! | CTGCACATTGGATTTGAGAT+AGG | - | chr3_4:27258908-27258927 | Msa0496470:intron | 40.0% |
| AAAAGGAAATGCCGGATAGT+TGG | + | chr3_4:27259080-27259099 | None:intergenic | 40.0% | |
| ! | GTGTCTATTTCTTCAAGCAG+AGG | + | chr3_4:27259315-27259334 | None:intergenic | 40.0% |
| TCAGCCTTACCATGAATTCT+TGG | + | chr3_4:27259715-27259734 | None:intergenic | 40.0% | |
| ATTCATGGTAAGGCTGAAGT+TGG | - | chr3_4:27259718-27259737 | Msa0496470:intron | 40.0% | |
| ! | GTTCATCACACTTTGAGAGA+AGG | + | chr3_4:27259767-27259786 | None:intergenic | 40.0% |
| GAATCGTAATTGGCAGATTC+AGG | + | chr3_4:27259789-27259808 | None:intergenic | 40.0% | |
| ! | TATGTACCTTGGTCTAGAGT+TGG | + | chr3_4:27259939-27259958 | None:intergenic | 40.0% |
| GCTAATGGTAGATGGATCAA+AGG | + | chr3_4:27260012-27260031 | None:intergenic | 40.0% | |
| ! | GGTTGATGTACCTGCTTCAA+AGG | - | chr3_4:27256965-27256984 | Msa0496470:three_prime_UTR | 45.0% |
| ACAACTACTTATCACCGCAC+CGG | + | chr3_4:27257030-27257049 | None:intergenic | 45.0% | |
| AAAGAACCAACACCGAAACC+CGG | + | chr3_4:27257137-27257156 | None:intergenic | 45.0% | |
| !! | GAGAAGCAGCTGATGGATTT+AGG | - | chr3_4:27257164-27257183 | Msa0496470:three_prime_UTR | 45.0% |
| ! | TGATTTTCGTGTTTGGGCGT+TGG | - | chr3_4:27257190-27257209 | Msa0496470:three_prime_UTR | 45.0% |
| AGATCCTGCTCCTTTGTCTA+AGG | - | chr3_4:27257247-27257266 | Msa0496470:three_prime_UTR | 45.0% | |
| TCTACCTTAGACAAAGGAGC+AGG | + | chr3_4:27257254-27257273 | None:intergenic | 45.0% | |
| ! | GCTCCTTTGTCTAAGGTAGA+AGG | - | chr3_4:27257254-27257273 | Msa0496470:three_prime_UTR | 45.0% |
| ACCCCTTCTACCTTAGACAA+AGG | + | chr3_4:27257260-27257279 | None:intergenic | 45.0% | |
| GAGTGGAAATGTTTCGCCTT+GGG | - | chr3_4:27257286-27257305 | Msa0496470:three_prime_UTR | 45.0% | |
| AGTGGAAATGTTTCGCCTTG+GGG | - | chr3_4:27257287-27257306 | Msa0496470:three_prime_UTR | 45.0% | |
| ! | AATGTTTCGCCTTGGGGTTT+TGG | - | chr3_4:27257293-27257312 | Msa0496470:three_prime_UTR | 45.0% |
| GTTTCATCTCCAAAACCCCA+AGG | + | chr3_4:27257305-27257324 | None:intergenic | 45.0% | |
| TGTCCACTAGCATAAGCACT+TGG | - | chr3_4:27257597-27257616 | Msa0496470:three_prime_UTR | 45.0% | |
| GTCCACTAGCATAAGCACTT+GGG | - | chr3_4:27257598-27257617 | Msa0496470:three_prime_UTR | 45.0% | |
| TAAGCACTTGGGAGACTGTT+TGG | - | chr3_4:27257609-27257628 | Msa0496470:three_prime_UTR | 45.0% | |
| AAGCACTTGGGAGACTGTTT+GGG | - | chr3_4:27257610-27257629 | Msa0496470:three_prime_UTR | 45.0% | |
| TCCAAACAAGGTTAGGTCAG+TGG | - | chr3_4:27257778-27257797 | Msa0496470:CDS | 45.0% | |
| TCCACTGACCTAACCTTGTT+TGG | + | chr3_4:27257782-27257801 | None:intergenic | 45.0% | |
| TTTGGCAGAAACCCCCAAAA+AGG | + | chr3_4:27258035-27258054 | None:intergenic | 45.0% | |
| ! | GCAAGTCCAGGAGATTTTAC+TGG | + | chr3_4:27258059-27258078 | None:intergenic | 45.0% |
| GGAAATACTTTGGCAAGTCC+AGG | + | chr3_4:27258071-27258090 | None:intergenic | 45.0% | |
| TGAAGGTAGAGGGAATGTTC+CGG | + | chr3_4:27258099-27258118 | None:intergenic | 45.0% | |
| TAGATGTGATAAGGGGATCC+TGG | + | chr3_4:27258328-27258347 | None:intergenic | 45.0% | |
| CGCTGAAGGATAATTCTCCT+TGG | + | chr3_4:27258571-27258590 | None:intergenic | 45.0% | |
| ATCCTTGGGTGACACCTATA+TGG | - | chr3_4:27258732-27258751 | Msa0496470:CDS | 45.0% | |
| TCCTTGGGTGACACCTATAT+GGG | - | chr3_4:27258733-27258752 | Msa0496470:CDS | 45.0% | |
| ! | GGGACTTCAGGTTAAAAGGA+AGG | - | chr3_4:27258754-27258773 | Msa0496470:intron | 45.0% |
| ! | ATTGGATTTGAGATAGGGCC+TGG | - | chr3_4:27258914-27258933 | Msa0496470:intron | 45.0% |
| AGAGTGTATCCAAGATCCGT+TGG | - | chr3_4:27259035-27259054 | Msa0496470:CDS | 45.0% | |
| GAGTGTATCCAAGATCCGTT+GGG | - | chr3_4:27259036-27259055 | Msa0496470:CDS | 45.0% | |
| !! | ATAGTTGGTGACCCAATAGC+AGG | + | chr3_4:27259065-27259084 | None:intergenic | 45.0% |
| CTATTGGGTCACCAACTATC+CGG | - | chr3_4:27259066-27259085 | Msa0496470:CDS | 45.0% | |
| AGTGCGCAAAAAGGAAATGC+CGG | + | chr3_4:27259088-27259107 | None:intergenic | 45.0% | |
| CTCCAGAGATGTCATCAAAG+AGG | - | chr3_4:27259645-27259664 | Msa0496470:intron | 45.0% | |
| ! | CTCCTCTTTGATGACATCTC+TGG | + | chr3_4:27259650-27259669 | None:intergenic | 45.0% |
| AGGAGACTATTGAGCTCACT+AGG | - | chr3_4:27259665-27259684 | Msa0496470:intron | 45.0% | |
| AGACTATTGAGCTCACTAGG+AGG | - | chr3_4:27259668-27259687 | Msa0496470:intron | 45.0% | |
| GACTATTGAGCTCACTAGGA+GGG | - | chr3_4:27259669-27259688 | Msa0496470:intron | 45.0% | |
| ACTATTGAGCTCACTAGGAG+GGG | - | chr3_4:27259670-27259689 | Msa0496470:intron | 45.0% | |
| !! | AAGGCAACAGAAGTGCTGAT+TGG | + | chr3_4:27259748-27259767 | None:intergenic | 45.0% |
| TGCTCTTCATGCAGAGATGT+GGG | + | chr3_4:27259963-27259982 | None:intergenic | 45.0% | |
| ATGCTCTTCATGCAGAGATG+TGG | + | chr3_4:27259964-27259983 | None:intergenic | 45.0% | |
| CAAAGGTTTGTCCGCAAGAT+TGG | + | chr3_4:27259995-27260014 | None:intergenic | 45.0% | |
| TTCGGGATGCTAATGGTAGA+TGG | + | chr3_4:27260020-27260039 | None:intergenic | 45.0% | |
| TACCATTAGCATCCCGAAGT+AGG | - | chr3_4:27260022-27260041 | Msa0496470:CDS | 45.0% | |
| AAAGAGAATGGAGATCGCTC+GGG | + | chr3_4:27260057-27260076 | None:intergenic | 45.0% | |
| CAAAGAGAATGGAGATCGCT+CGG | + | chr3_4:27260058-27260077 | None:intergenic | 45.0% | |
| AGTTTGATCCATCCCTCTTG+AGG | - | chr3_4:27260096-27260115 | Msa0496470:CDS | 45.0% | |
| GGAAATATCCTCAAGAGGGA+TGG | + | chr3_4:27260107-27260126 | None:intergenic | 45.0% | |
| GGCTGGAAATATCCTCAAGA+GGG | + | chr3_4:27260111-27260130 | None:intergenic | 45.0% | |
| TGGCTGGAAATATCCTCAAG+AGG | + | chr3_4:27260112-27260131 | None:intergenic | 45.0% | |
| GTCATCTATTGAGAGACGGA+GGG | + | chr3_4:27260299-27260318 | None:intergenic | 45.0% | |
| TGTCATCTATTGAGAGACGG+AGG | + | chr3_4:27260300-27260319 | None:intergenic | 45.0% | |
| CTAGGTCATCTAATGTGGGA+CGG | - | chr3_4:27260523-27260542 | Msa0496470:five_prime_UTR | 45.0% | |
| ATCTAACGGTGAATCCGGTG+CGG | - | chr3_4:27257013-27257032 | Msa0496470:three_prime_UTR | 50.0% | |
| !! | TTTTTGCCGGGTTTCGGTGT+TGG | - | chr3_4:27257128-27257147 | Msa0496470:three_prime_UTR | 50.0% |
| GTAGAAGGGGTTATGTCGAG+TGG | - | chr3_4:27257269-27257288 | Msa0496470:three_prime_UTR | 50.0% | |
| CGAGTGGAAATGTTTCGCCT+TGG | - | chr3_4:27257285-27257304 | Msa0496470:three_prime_UTR | 50.0% | |
| TTGGAGATGAAACCGAACCG+TGG | - | chr3_4:27257312-27257331 | Msa0496470:three_prime_UTR | 50.0% | |
| TGGAGATGAAACCGAACCGT+GGG | - | chr3_4:27257313-27257332 | Msa0496470:three_prime_UTR | 50.0% | |
| GGCGACTGAGCTTGTGTATT+CGG | - | chr3_4:27257334-27257353 | Msa0496470:three_prime_UTR | 50.0% | |
| CTCCCAAGTGCTTATGCTAG+TGG | + | chr3_4:27257603-27257622 | None:intergenic | 50.0% | |
| ! | GCCAAAGTATTTCCATGGGC+CGG | - | chr3_4:27258077-27258096 | Msa0496470:intron | 50.0% |
| TCCGGCCCATGGAAATACTT+TGG | + | chr3_4:27258081-27258100 | None:intergenic | 50.0% | |
| ACTGCTGATAGTACACCTCC+AGG | - | chr3_4:27258307-27258326 | Msa0496470:intron | 50.0% | |
| ATGTGATAAGGGGATCCTGG+AGG | + | chr3_4:27258325-27258344 | None:intergenic | 50.0% | |
| !! | GTGCCGATTTGCCTCATGTA+TGG | - | chr3_4:27258701-27258720 | Msa0496470:CDS | 50.0% |
| CCTTGGGTGACACCTATATG+GGG | - | chr3_4:27258734-27258753 | Msa0496470:CDS | 50.0% | |
| GACACCTATATGGGGACTTC+AGG | - | chr3_4:27258742-27258761 | Msa0496470:intron | 50.0% | |
| AGAGAGAGCCATCAGACTCT+AGG | + | chr3_4:27259287-27259306 | None:intergenic | 50.0% | |
| TGAATACGCCGAATGAGCAC+AGG | - | chr3_4:27259818-27259837 | Msa0496470:CDS | 50.0% | |
| GAATACGCCGAATGAGCACA+GGG | - | chr3_4:27259819-27259838 | Msa0496470:CDS | 50.0% | |
| AATACGCCGAATGAGCACAG+GGG | - | chr3_4:27259820-27259839 | Msa0496470:CDS | 50.0% | |
| !! | CTAGAGTTGGCTTGGAGAGA+CGG | + | chr3_4:27259926-27259945 | None:intergenic | 50.0% |
| TCCAAGCCAACTCTAGACCA+AGG | - | chr3_4:27259930-27259949 | Msa0496470:CDS | 50.0% | |
| ! | ACCTTGGTCTAGAGTTGGCT+TGG | + | chr3_4:27259934-27259953 | None:intergenic | 50.0% |
| GAGATGTGGGGTATGTACCT+TGG | + | chr3_4:27259950-27259969 | None:intergenic | 50.0% | |
| GCTCTTCATGCAGAGATGTG+GGG | + | chr3_4:27259962-27259981 | None:intergenic | 50.0% | |
| CATCACAAGCGCCAATCTTG+CGG | - | chr3_4:27259981-27260000 | Msa0496470:CDS | 50.0% | |
| GATGGAGCGTGCAAAGAGAA+TGG | + | chr3_4:27260069-27260088 | None:intergenic | 50.0% | |
| TACACAAGCTCAGTCGCCCA+CGG | + | chr3_4:27257332-27257351 | None:intergenic | 55.0% | |
| TGCAGCAGCAGGATGTCTTG+TGG | + | chr3_4:27258519-27258538 | None:intergenic | 55.0% | |
| ! | CCCCATATAGGTGTCACCCA+AGG | + | chr3_4:27258737-27258756 | None:intergenic | 55.0% |
| CCTCAGGGACTTCGTCATGA+GGG | + | chr3_4:27258823-27258842 | None:intergenic | 55.0% | |
| ACCTCAGGGACTTCGTCATG+AGG | + | chr3_4:27258824-27258843 | None:intergenic | 55.0% | |
| !! | GTTGGTGACCCAATAGCAGG+TGG | + | chr3_4:27259062-27259081 | None:intergenic | 55.0% |
| GGACAACCCCTGTGCTCATT+CGG | + | chr3_4:27259829-27259848 | None:intergenic | 55.0% | |
| GGCCTACTTCGGGATGCTAA+TGG | + | chr3_4:27260027-27260046 | None:intergenic | 55.0% | |
| AATGGAGATCGCTCGGGATG+TGG | + | chr3_4:27260051-27260070 | None:intergenic | 55.0% | |
| GGTCATCTAATGTGGGACGG+AGG | - | chr3_4:27260526-27260545 | Msa0496470:five_prime_UTR | 55.0% | |
| AAGCTCAGTCGCCCACGGTT+CGG | + | chr3_4:27257327-27257346 | None:intergenic | 60.0% | |
| AGAGGGAATGTTCCGGCCCA+TGG | + | chr3_4:27258092-27258111 | None:intergenic | 60.0% | |
| GCAAATGAGGCTGCAGCAGC+AGG | + | chr3_4:27258530-27258549 | None:intergenic | 60.0% | |
| CATGAGGGCAGTGACCAGCA+GGG | + | chr3_4:27258808-27258827 | None:intergenic | 60.0% | |
| TCATGAGGGCAGTGACCAGC+AGG | + | chr3_4:27258809-27258828 | None:intergenic | 60.0% | |
| CCCTCATGACGAAGTCCCTG+AGG | - | chr3_4:27258820-27258839 | Msa0496470:intron | 60.0% | |
| TCCGTTGGGCCACCTGCTAT+TGG | - | chr3_4:27259050-27259069 | Msa0496470:CDS | 60.0% | |
| CCCAATAGCAGGTGGCCCAA+CGG | + | chr3_4:27259054-27259073 | None:intergenic | 60.0% | |
| CCGTTGGGCCACCTGCTATT+GGG | - | chr3_4:27259051-27259070 | Msa0496470:CDS | 60.0% | |
| GGGATGTGGAGGCCTACTTC+GGG | + | chr3_4:27260037-27260056 | None:intergenic | 60.0% | |
| CGGGATGTGGAGGCCTACTT+CGG | + | chr3_4:27260038-27260057 | None:intergenic | 60.0% | |
| GCAGGTGGCCCAACGGATCT+TGG | + | chr3_4:27259047-27259066 | None:intergenic | 65.0% | |
| GGAGATCGCTCGGGATGTGG+AGG | + | chr3_4:27260048-27260067 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 27256617 | 27260549 | 27256617 | ID=Msa0496470;Name=Msa0496470 |
| chr3_4 | mRNA | 27256617 | 27260549 | 27256617 | ID=Msa0496470-mRNA-1;Parent=Msa0496470;Name=Msa0496470-mRNA-1;_AED=0.25;_eAED=0.25;_QI=46|1|1|1|1|1|5|1121|496 |
| chr3_4 | exon | 27256617 | 27257917 | 27256617 | ID=Msa0496470-mRNA-1:exon:6471;Parent=Msa0496470-mRNA-1 |
| chr3_4 | exon | 27258325 | 27258481 | 27258325 | ID=Msa0496470-mRNA-1:exon:6470;Parent=Msa0496470-mRNA-1 |
| chr3_4 | exon | 27258563 | 27258754 | 27258563 | ID=Msa0496470-mRNA-1:exon:6469;Parent=Msa0496470-mRNA-1 |
| chr3_4 | exon | 27259022 | 27259248 | 27259022 | ID=Msa0496470-mRNA-1:exon:6468;Parent=Msa0496470-mRNA-1 |
| chr3_4 | exon | 27259769 | 27260549 | 27259769 | ID=Msa0496470-mRNA-1:exon:6467;Parent=Msa0496470-mRNA-1 |
| chr3_4 | five_prime_UTR | 27260504 | 27260549 | 27260504 | ID=Msa0496470-mRNA-1:five_prime_utr;Parent=Msa0496470-mRNA-1 |
| chr3_4 | CDS | 27259769 | 27260503 | 27259769 | ID=Msa0496470-mRNA-1:cds;Parent=Msa0496470-mRNA-1 |
| chr3_4 | CDS | 27259022 | 27259248 | 27259022 | ID=Msa0496470-mRNA-1:cds;Parent=Msa0496470-mRNA-1 |
| chr3_4 | CDS | 27258563 | 27258754 | 27258563 | ID=Msa0496470-mRNA-1:cds;Parent=Msa0496470-mRNA-1 |
| chr3_4 | CDS | 27258325 | 27258481 | 27258325 | ID=Msa0496470-mRNA-1:cds;Parent=Msa0496470-mRNA-1 |
| chr3_4 | CDS | 27257738 | 27257917 | 27257738 | ID=Msa0496470-mRNA-1:cds;Parent=Msa0496470-mRNA-1 |
| chr3_4 | three_prime_UTR | 27256617 | 27257737 | 27256617 | ID=Msa0496470-mRNA-1:three_prime_utr;Parent=Msa0496470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
