AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0501430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0501430 MtrunA17_Chr3g0099031 95.517 513 23 0 1 513 1 513 0.0 1020
Msa0501430 MtrunA17_Chr3g0108941 78.168 513 111 1 1 512 1 513 0.0 849
Msa0501430 MtrunA17_Chr3g0109021 77.344 512 116 0 1 512 1 512 0.0 841
Msa0501430 MtrunA17_Chr3g0109001 77.388 513 115 1 1 512 1 513 0.0 839
Msa0501430 MtrunA17_Chr3g0105691 77.104 511 117 0 2 512 35 545 0.0 834
Msa0501430 MtrunA17_Chr3g0108991 76.953 512 118 0 1 512 1 512 0.0 833
Msa0501430 MtrunA17_Chr3g0108951 76.953 512 118 0 1 512 1 512 0.0 833
Msa0501430 MtrunA17_Chr3g0109031 77.148 512 117 0 1 512 1 512 0.0 830
Msa0501430 MtrunA17_Chr3g0109011 77.778 486 108 0 27 512 2 487 0.0 805
Msa0501430 MtrunA17_Chr3g0108971 77.572 486 109 0 27 512 2 487 0.0 802
Msa0501430 MtrunA17_Chr3g0108981 78.234 487 105 1 27 512 2 488 0.0 799
Msa0501430 MtrunA17_Chr3g0108961 78.234 487 105 1 27 512 2 488 0.0 799
Msa0501430 MtrunA17_Chr6g0477111 75.514 486 119 0 27 512 2 487 0.0 783
Msa0501430 MtrunA17_Chr2g0280581 68.085 517 160 3 1 512 1 517 0.0 735
Msa0501430 MtrunA17_Chr6g0477121 75.120 418 104 0 87 504 5 422 0.0 675
Msa0501430 MtrunA17_Chr4g0048911 46.784 513 264 5 2 512 49 554 1.66e-162 473
Msa0501430 MtrunA17_Chr4g0048921 46.507 501 255 9 16 512 74 565 6.02e-141 417
Msa0501430 MtrunA17_Chr2g0323131 33.532 504 315 7 13 512 72 559 1.49e-96 303
Msa0501430 MtrunA17_Chr2g0323151 32.573 482 312 5 31 512 6 474 8.64e-90 283
Msa0501430 MtrunA17_Chr2g0310331 31.518 514 339 7 2 512 77 580 1.03e-76 252
Msa0501430 MtrunA17_Chr4g0042111 30.261 499 324 9 6 493 50 535 1.47e-72 240
Msa0501430 MtrunA17_Chr4g0023911 32.500 520 329 14 2 512 69 575 1.25e-70 236
Msa0501430 MtrunA17_Chr4g0024691 29.365 504 338 9 17 512 62 555 5.10e-69 231
Msa0501430 MtrunA17_Chr8g0357411 29.240 513 342 8 7 512 85 583 6.15e-66 223
Msa0501430 MtrunA17_Chr2g0319041 28.810 479 327 6 22 494 61 531 1.66e-61 211
Msa0501430 MtrunA17_Chr7g0237011 28.778 483 326 9 22 498 6 476 1.04e-60 207
Msa0501430 MtrunA17_Chr7g0236961 28.542 480 331 7 22 498 6 476 2.34e-60 206
Msa0501430 MtrunA17_Chr7g0237001 28.778 483 326 9 22 498 61 531 4.22e-60 207
Msa0501430 MtrunA17_Chr7g0237041 28.778 483 326 9 22 498 61 531 4.22e-60 207
Msa0501430 MtrunA17_Chr7g0237081 28.778 483 326 9 22 498 61 531 4.22e-60 207
Msa0501430 MtrunA17_Chr7g0237051 28.778 483 326 9 22 498 61 531 4.22e-60 207
Msa0501430 MtrunA17_Chr7g0236991 28.542 480 331 7 22 498 61 531 5.76e-60 207
Msa0501430 MtrunA17_Chr3g0105071 28.295 516 354 9 4 512 45 551 6.98e-60 206
Msa0501430 MtrunA17_Chr2g0310401 31.776 428 282 8 89 512 5 426 2.77e-59 202
Msa0501430 MtrunA17_Chr2g0319051 27.821 514 357 7 6 512 2 508 3.46e-59 204
Msa0501430 MtrunA17_Chr6g0466051 27.767 497 343 9 22 512 61 547 5.20e-59 204
Msa0501430 MtrunA17_Chr6g0451711 27.579 504 335 9 22 512 65 551 8.06e-59 204
Msa0501430 MtrunA17_Chr6g0465851 27.921 505 332 10 22 512 26 512 1.04e-58 202
Msa0501430 MtrunA17_Chr6g0465911 28.425 489 320 9 22 498 61 531 2.14e-58 202
Msa0501430 MtrunA17_Chr5g0431571 29.459 499 333 11 22 512 56 543 1.07e-57 201
Msa0501430 MtrunA17_Chr3g0082691 28.715 498 338 8 22 512 60 547 1.27e-57 200
Msa0501430 MtrunA17_Chr6g0465441 27.565 497 338 10 22 513 61 540 1.45e-57 200
Msa0501430 MtrunA17_Chr5g0425371 28.313 498 339 9 22 512 61 547 3.28e-57 199
Msa0501430 MtrunA17_Chr5g0431651 27.734 512 350 9 6 512 50 546 9.66e-57 198
Msa0501430 MtrunA17_Chr8g0336181 29.307 505 320 15 26 512 65 550 1.85e-55 194
Msa0501430 MtrunA17_Chr7g0236971 28.424 387 266 6 115 498 1 379 1.51e-48 172
Msa0501430 MtrunA17_Chr7g0217361 31.596 307 195 6 213 512 6 304 1.37e-46 164
Msa0501430 MtrunA17_Chr4g0008621 28.117 377 260 6 7 376 52 424 7.59e-45 163
Msa0501430 MtrunA17_Chr8g0357231 33.721 258 163 6 258 512 1 253 1.77e-40 146
Msa0501430 MtrunA17_Chr6g0466111 30.897 301 188 5 22 313 26 315 3.10e-38 142
Msa0501430 MtrunA17_Chr6g0465981 30.897 301 188 5 22 313 61 350 7.44e-38 142
Msa0501430 MtrunA17_Chr6g0465871 30.897 301 188 5 22 313 61 350 7.44e-38 142
Msa0501430 MtrunA17_Chr6g0466081 30.897 301 188 5 22 313 61 350 7.44e-38 142
Msa0501430 MtrunA17_Chr6g0465931 30.565 301 189 5 22 313 26 315 6.23e-37 139
Msa0501430 MtrunA17_Chr7g0237031 28.438 320 215 6 22 335 6 317 3.70e-36 136
Msa0501430 MtrunA17_Chr7g0236951 28.076 317 220 4 22 335 6 317 8.12e-36 135
Msa0501430 MtrunA17_Chr2g0319071 24.893 466 300 9 29 493 46 462 9.22e-33 130
Msa0501430 MtrunA17_Chr6g0466031 26.772 254 174 5 264 512 8 254 1.02e-27 111
Msa0501430 MtrunA17_Chr5g0445511 29.717 212 142 4 111 321 2 207 1.30e-27 110
Msa0501430 MtrunA17_Chr2g0319081 23.955 359 252 8 141 494 59 401 2.99e-27 114
Msa0501430 MtrunA17_Chr7g0237061 28.631 241 145 4 258 498 2 215 6.44e-27 108
Msa0501430 MtrunA17_Chr2g0310121 24.413 426 284 12 29 428 276 689 6.27e-23 102
Msa0501430 MtrunA17_Chr3g0101681 24.548 387 246 12 29 383 277 649 3.43e-20 94.4
Msa0501430 MtrunA17_Chr8g0357221 28.922 204 130 4 7 205 85 278 9.32e-17 80.9
Msa0501430 MtrunA17_Chr2g0281651 25.556 270 190 6 195 462 45 305 2.75e-16 80.9
Msa0501430 MtrunA17_Chr7g0237021 29.870 154 104 3 345 498 1 150 2.53e-14 71.2
Msa0501430 MtrunA17_Chr7g0236941 29.870 154 104 3 345 498 1 150 2.53e-14 71.2
Msa0501430 MtrunA17_Chr6g0466021 33.566 143 93 2 22 164 61 201 1.45e-13 69.7
Msa0501430 MtrunA17_Chr6g0465881 26.590 173 115 5 345 512 1 166 1.11e-12 66.2
Msa0501430 MtrunA17_Chr6g0465941 26.590 173 115 5 345 512 1 166 1.30e-12 66.2
Msa0501430 MtrunA17_Chr6g0466121 26.590 173 115 5 345 512 1 166 1.30e-12 66.2
Msa0501430 MtrunA17_Chr6g0465991 26.590 173 115 5 345 512 1 166 1.30e-12 66.2
Msa0501430 MtrunA17_Chr6g0466091 26.590 173 115 5 345 512 1 166 1.30e-12 66.2
Msa0501430 MtrunA17_Chr7g0259881 24.590 305 183 11 20 290 221 512 7.55e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0501430 AT1G61680.1 41.176 493 272 9 25 512 90 569 9.47e-126 379
Msa0501430 AT1G61680.2 41.379 493 264 10 25 512 90 562 6.55e-124 374
Msa0501430 AT4G16730.1 30.377 530 339 12 4 512 13 533 2.24e-70 234
Msa0501430 AT4G16730.2 30.444 496 322 11 31 512 1 487 3.90e-68 227
Msa0501430 AT4G16740.1 30.814 516 330 10 9 512 58 558 1.23e-65 223
Msa0501430 AT5G23960.1 28.155 515 351 10 7 512 37 541 8.58e-60 206
Msa0501430 AT5G23960.2 28.155 515 349 10 7 512 37 539 1.25e-59 206
Msa0501430 AT2G24210.1 27.863 524 348 12 6 512 74 584 5.34e-58 202
Msa0501430 AT3G25820.1 29.518 498 332 10 27 512 98 588 3.29e-57 201
Msa0501430 AT3G25830.1 29.518 498 332 10 27 512 98 588 3.29e-57 201
Msa0501430 AT3G25810.1 28.343 501 336 10 27 512 99 591 6.68e-56 197
Msa0501430 AT1G70080.1 26.316 494 340 13 31 511 122 604 8.77e-47 172
Msa0501430 AT4G16740.2 31.871 342 216 7 9 341 58 391 2.90e-41 153
Msa0501430 AT1G33750.1 23.944 497 349 12 27 511 117 596 4.27e-39 150
Msa0501430 AT3G14490.1 23.030 495 361 8 27 512 112 595 3.71e-38 148
Msa0501430 AT3G14520.1 22.267 494 361 9 6 493 101 577 4.33e-38 147
Msa0501430 AT3G25820.2 29.851 335 225 6 27 355 98 428 8.41e-37 141
Msa0501430 AT1G31950.3 21.622 481 365 7 18 493 107 580 1.33e-33 135
Msa0501430 AT1G31950.1 21.622 481 365 7 18 493 106 579 1.35e-33 135
Msa0501430 AT3G14540.1 21.341 492 368 7 6 493 98 574 1.68e-33 134
Msa0501430 AT3G29410.2 22.899 476 343 10 27 493 11 471 2.83e-33 132
Msa0501430 AT3G29410.1 22.899 476 343 10 27 493 116 576 6.37e-33 132
Msa0501430 AT5G48110.1 29.114 316 212 7 192 504 18 324 7.07e-33 128
Msa0501430 AT4G16740.4 29.358 327 210 7 9 326 58 372 1.02e-31 126
Msa0501430 AT4G16740.3 29.358 327 210 7 9 326 58 372 1.02e-31 126
Msa0501430 AT4G13300.1 25.237 527 365 12 1 512 36 548 2.67e-31 127
Msa0501430 AT5G44630.1 22.154 492 359 9 32 512 73 551 1.52e-28 119
Msa0501430 AT4G13280.2 24.686 478 342 9 43 512 81 548 2.35e-28 119
Msa0501430 AT4G15870.1 23.048 525 368 15 1 512 91 592 2.72e-28 119
Msa0501430 AT3G25820.4 30.741 270 177 6 27 290 98 363 3.72e-28 116
Msa0501430 AT3G25820.3 30.741 270 177 6 27 290 98 363 3.72e-28 116
Msa0501430 AT1G31950.2 21.235 405 309 5 18 418 107 505 2.17e-26 112
Msa0501430 AT3G14540.2 20.913 416 312 5 6 418 98 499 3.46e-26 112
Msa0501430 AT3G32030.1 20.641 499 356 12 8 488 95 571 5.77e-26 112
Msa0501430 AT4G20200.1 22.880 507 339 14 31 512 119 598 6.33e-26 112
Msa0501430 AT2G23230.2 23.819 529 372 15 1 512 80 594 1.24e-25 111
Msa0501430 AT4G20230.1 22.403 491 362 11 31 512 119 599 4.61e-25 109
Msa0501430 AT4G20230.2 22.764 492 359 13 31 512 131 611 5.84e-25 109
Msa0501430 AT3G29110.1 22.148 447 328 9 31 469 112 546 7.23e-25 108
Msa0501430 AT2G23230.1 23.340 527 372 14 1 512 80 589 1.20e-24 108
Msa0501430 AT3G29190.1 20.958 501 379 11 1 493 83 574 7.71e-23 102
Msa0501430 AT4G20210.1 21.956 501 374 11 1 493 82 573 9.46e-23 102
Msa0501430 AT1G48800.1 21.162 482 347 10 27 493 116 579 4.99e-22 100
Msa0501430 AT1G66020.1 21.987 473 347 8 31 494 113 572 8.29e-21 96.3
Msa0501430 AT4G13280.1 23.640 478 317 10 43 512 81 518 9.06e-21 95.9
Msa0501430 AT1G61120.1 22.727 484 321 14 15 469 273 732 7.35e-18 87.8
Msa0501430 AT1G79460.1 23.326 433 289 15 24 428 270 687 2.24e-15 79.7
Msa0501430 AT1G66020.2 23.649 296 208 5 31 317 113 399 2.83e-15 78.6

Find 93 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGGTTTGTCAAGATTTA+TGG 0.092924 3_4:-42610181 Msa0501430:CDS
GCCACTGAATAAATGATATT+TGG 0.132493 3_4:+42609013 None:intergenic
GAAGATGGTCTCAATGATTT+AGG 0.178561 3_4:-42610300 Msa0501430:CDS
ATGTCTCAATCAAGAAATTT+TGG 0.182807 3_4:-42608230 Msa0501430:CDS
TGGCTACTAACGAAATTAAT+TGG 0.195084 3_4:+42611689 None:intergenic
CCCAAGCCTCTCTAGTTTAA+AGG 0.204736 3_4:-42608122 Msa0501430:CDS
GACCATTTCAGCAAAATTAT+TGG 0.211226 3_4:+42609422 None:intergenic
AATGTTGATGGAAATAAATA+AGG 0.298715 3_4:+42608205 None:intergenic
TTGACAAACCATAGTGAATA+GGG 0.327042 3_4:+42610190 None:intergenic
GAGGCTCATTGGCTGAATTC+TGG 0.327673 3_4:-42609178 Msa0501430:CDS
CAAAGAAACTTTCATGAAGT+TGG 0.330290 3_4:+42609464 None:intergenic
CTTCTCCTTCAATACTTAGT+TGG 0.335760 3_4:+42610319 None:intergenic
CTTCAATCCCCTATTCACTA+TGG 0.338821 3_4:-42610198 Msa0501430:CDS
CTTGACAAACCATAGTGAAT+AGG 0.344145 3_4:+42610189 None:intergenic
ACCAACCTGCATTGACATAA+TGG 0.346642 3_4:+42611618 None:intergenic
CATATTCATTAATGATTTGA+AGG 0.348286 3_4:-42610151 Msa0501430:CDS
CGTCTCTCTGATGATTTAGA+AGG 0.358143 3_4:-42608980 Msa0501430:CDS
TTCTCCTTCAATACTTAGTT+GGG 0.360234 3_4:+42610320 None:intergenic
TATTTACAGAAGCTGTTAAC+AGG 0.368260 3_4:-42609686 Msa0501430:intron
CTTTCTTGAAAGAGGCTCAT+TGG 0.375504 3_4:-42609189 Msa0501430:CDS
GTGCAACTTCATAAAGTTCA+TGG 0.376591 3_4:+42611669 None:intergenic
GAACCATTCTAGCAGCATTA+AGG 0.377290 3_4:+42608170 None:intergenic
CCTTTAAACTAGAGAGGCTT+GGG 0.377729 3_4:+42608122 None:intergenic
GGCTTGGGTTGCTCTTATAA+TGG 0.379785 3_4:+42608137 None:intergenic
GGAGATCAAAATGGTCTTGA+TGG 0.387702 3_4:-42608346 Msa0501430:CDS
AACTCAATTCAGATGGGAAA+TGG 0.388604 3_4:-42609505 Msa0501430:intron
TATCCATGCTTTCTTCCTCA+TGG 0.392678 3_4:-42609089 Msa0501430:CDS
AGTGTTCAATGCCAAGCCTT+TGG 0.393705 3_4:+42611771 None:intergenic
ACCAAGGAGATGAAGTTTGC+AGG 0.393988 3_4:-42609861 Msa0501430:CDS
ATAATATAAACAAGAGAGAT+TGG 0.396389 3_4:+42609753 None:intergenic
ATTAAATGCTTTCTTGAAAG+AGG 0.400182 3_4:-42609197 Msa0501430:CDS
CTGAGATGATTTCAAATGAA+TGG 0.406534 3_4:-42608255 Msa0501430:CDS
AAAGAAACTTTCATGAAGTT+GGG 0.408850 3_4:+42609465 None:intergenic
TTGCCTTAATGCTGCTAGAA+TGG 0.410123 3_4:-42608173 Msa0501430:CDS
AAATCATTGAGAGTAAAATA+TGG 0.425108 3_4:-42610381 Msa0501430:CDS
GTTCATGAACTGAGCTATGC+TGG 0.430561 3_4:+42610083 None:intergenic
TCCTTTAAACTAGAGAGGCT+TGG 0.444826 3_4:+42608121 None:intergenic
TTCAAGTATTCCTCAGTTGT+TGG 0.451436 3_4:+42609148 None:intergenic
ATTTGAAGGCTAAGAACAAA+TGG 0.457215 3_4:-42610137 Msa0501430:CDS
CTTCCTCATGGATCATGCTA+AGG 0.457851 3_4:-42609077 Msa0501430:CDS
ATGTTGATGGAAATAAATAA+GGG 0.459863 3_4:+42608206 None:intergenic
CCCTGCAAACTTCATCTCCT+TGG 0.461049 3_4:+42609860 None:intergenic
AAGATGGTCTCAATGATTTA+GGG 0.471621 3_4:-42610299 Msa0501430:CDS
GCATCCCAACTAAGTATTGA+AGG 0.471653 3_4:-42610324 Msa0501430:CDS
CAGGGTATAATCCTCTGAAA+TGG 0.476802 3_4:-42609842 Msa0501430:CDS
CTAAGTATTGAAGGAGAAGA+TGG 0.480587 3_4:-42610315 Msa0501430:CDS
TAAAATAACTGAAAGCACTT+GGG 0.482176 3_4:+42607964 None:intergenic
ATTGACATCATCCAAAGGCT+TGG 0.485610 3_4:-42611782 Msa0501430:CDS
ACTGAGGAATACTTGAACAA+TGG 0.486390 3_4:-42609142 Msa0501430:CDS
TCCAAATATCATTTATTCAG+TGG 0.493153 3_4:-42609014 Msa0501430:CDS
GTTGTGAGCTTCTTCAAGCA+TGG 0.495898 3_4:-42610269 Msa0501430:CDS
AAGAGCCACTTTGATCTCCT+CGG 0.504444 3_4:+42611742 None:intergenic
AAACATATATAGCTTGGCTA+TGG 0.510587 3_4:+42610229 None:intergenic
ATCAAATGAAAATTCTCAGT+TGG 0.512307 3_4:+42611803 None:intergenic
ACCCTTTCGTTCGAAAAGCA+TGG 0.515766 3_4:+42609789 None:intergenic
ATACAGAGTGGAGATCAAAA+TGG 0.520738 3_4:-42608355 Msa0501430:intron
CATGTTCCTTTAAACTAGAG+AGG 0.521675 3_4:+42608116 None:intergenic
TTTCGATGTTCACGGAACAT+TGG 0.523216 3_4:-42609721 Msa0501430:CDS
ATAAACAAGAGAGATTGGTT+TGG 0.523296 3_4:+42609758 None:intergenic
TGTTTGAAACATATATAGCT+TGG 0.529765 3_4:+42610223 None:intergenic
TGGATCCGTAAAACATGCCA+TGG 0.534660 3_4:+42609809 None:intergenic
ATAAAATAACTGAAAGCACT+TGG 0.535545 3_4:+42607963 None:intergenic
TAGTTGGGATGCTTCATACA+AGG 0.535663 3_4:+42610335 None:intergenic
TTCCTCATGGATCATGCTAA+GGG 0.541745 3_4:-42609076 Msa0501430:CDS
TTCCTAAATTGATAGATGGT+GGG 0.541994 3_4:-42609898 Msa0501430:intron
AACAATGGAATTGTGAGCAC+AGG 0.547885 3_4:-42609127 Msa0501430:CDS
GGCCTCCTTGTCTGAGCAAG+CGG 0.550833 3_4:+42611639 None:intergenic
CCAAGGAGATGAAGTTTGCA+GGG 0.558723 3_4:-42609860 Msa0501430:CDS
GCATTCCGCTTGCTCAGACA+AGG 0.560215 3_4:-42611644 Msa0501430:CDS
TCATCTCCTTGGTCAGTCCA+AGG 0.572703 3_4:+42609871 None:intergenic
GGAGGCCATTATGTCAATGC+AGG 0.572931 3_4:-42611623 Msa0501430:intron
GATAGATGGTGGGAAGACCT+TGG 0.578924 3_4:-42609888 Msa0501430:intron
ATCCTCTGAAATGGTACATG+TGG 0.583397 3_4:-42609833 Msa0501430:CDS
ATTTGATTGACATCATCCAA+AGG 0.587022 3_4:-42611787 Msa0501430:CDS
GATCCATGAGGAAGAAAGCA+TGG 0.590214 3_4:+42609086 None:intergenic
TGATGATTTAGAAGGAGCTA+AGG 0.590500 3_4:-42608972 Msa0501430:intron
AAAATAACTGAAAGCACTTG+GGG 0.595404 3_4:+42607965 None:intergenic
CAATTCAGATGGGAAATGGA+TGG 0.602557 3_4:-42609501 Msa0501430:intron
GGCCACATGTACCATTTCAG+AGG 0.612528 3_4:+42609831 None:intergenic
CTCTTATAATGGTACATGAG+AGG 0.616329 3_4:+42608148 None:intergenic
GGAAGACCTTGGACTGACCA+AGG 0.625800 3_4:-42609877 Msa0501430:CDS
ATTGAGAGTAAAATATGGTG+AGG 0.627693 3_4:-42610376 Msa0501430:CDS
AAATATGGTGAGGATGTGAA+AGG 0.628992 3_4:-42610366 Msa0501430:CDS
TGACAAACCATAGTGAATAG+GGG 0.640904 3_4:+42610191 None:intergenic
TCATGCTAAGGGTATAACAA+AGG 0.641231 3_4:-42609065 Msa0501430:CDS
GGATCCGTAAAACATGCCAT+GGG 0.664006 3_4:+42609810 None:intergenic
CTTGAAGAAGCTCACAACTG+AGG 0.664155 3_4:+42610274 None:intergenic
CATTGAACACTACTTTGCCG+AGG 0.665299 3_4:-42611759 Msa0501430:CDS
TTCCGCTTGCTCAGACAAGG+AGG 0.669099 3_4:-42611641 Msa0501430:CDS
CTTTGCCGAGGAGATCAAAG+TGG 0.670162 3_4:-42611747 Msa0501430:CDS
GAAATGGTACATGTGGCCCA+TGG 0.691281 3_4:-42609826 Msa0501430:CDS
TACCCTTAGCATGATCCATG+AGG 0.701129 3_4:+42609074 None:intergenic
ATTAGAAATGATGATATGTG+AGG 0.723334 3_4:+42612103 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAAAAAAAATTATCTT+TGG - chr3_4:42608591-42608610 Msa0501430:intron 10.0%
!! AATTATGAAATAAGTGAATA+TGG + chr3_4:42608716-42608735 None:intergenic 15.0%
!!! AATTCTGAAAACAAAATTAT+TGG - chr3_4:42608732-42608751 Msa0501430:intron 15.0%
!!! TTTTTTATTGAGTGATTTTT+TGG + chr3_4:42609588-42609607 None:intergenic 15.0%
!!! AAATGTATTTTGTTTACAAT+TGG - chr3_4:42609610-42609629 Msa0501430:intron 15.0%
!!! ATATTTTTAGTGTATCTATA+GGG + chr3_4:42610675-42610694 None:intergenic 15.0%
!! TATAGATACACTAAAAATAT+CGG - chr3_4:42610675-42610694 Msa0501430:intron 15.0%
!! CATAAAATAATAAGATAAAC+TGG - chr3_4:42611160-42611179 Msa0501430:intron 15.0%
!! AATAATAGAGTCAATATAAT+GGG + chr3_4:42611495-42611514 None:intergenic 15.0%
!!! ATCCTTTAAAATGAATAAGT+GGG + chr3_4:42608547-42608566 None:intergenic 20.0%
!! GATGTAATTGATATAATACA+AGG + chr3_4:42608780-42608799 None:intergenic 20.0%
!! AACAAAAATTAGAAGTTTAG+TGG + chr3_4:42608853-42608872 None:intergenic 20.0%
!!! ACTAAACTTCTAATTTTTGT+TGG - chr3_4:42608852-42608871 Msa0501430:intron 20.0%
!! TAATATACGTTTACTTTATG+TGG + chr3_4:42608890-42608909 None:intergenic 20.0%
!!! TTTTTTTGGTAGTGATATTT+TGG + chr3_4:42609071-42609090 None:intergenic 20.0%
!!! ATTTTACTCTCAATGATTTT+TGG + chr3_4:42609669-42609688 None:intergenic 20.0%
!! AAATCATTGAGAGTAAAATA+TGG - chr3_4:42609670-42609689 Msa0501430:intron 20.0%
!! CATATTCATTAATGATTTGA+AGG - chr3_4:42609900-42609919 Msa0501430:intron 20.0%
!!! AAAAACACACATTTTTAATC+AGG + chr3_4:42610028-42610047 None:intergenic 20.0%
!! TTATTTCCTAAATTGATAGA+TGG - chr3_4:42610149-42610168 Msa0501430:CDS 20.0%
!! ATAATATAAACAAGAGAGAT+TGG + chr3_4:42610301-42610320 None:intergenic 20.0%
!!! GATATTTTTAGTGTATCTAT+AGG + chr3_4:42610676-42610695 None:intergenic 20.0%
!! ATAATAGAGTCAATATAATG+GGG + chr3_4:42611494-42611513 None:intergenic 20.0%
!! GAATAATAGAGTCAATATAA+TGG + chr3_4:42611496-42611515 None:intergenic 20.0%
!!! ATGTTGATGGAAATAAATAA+GGG + chr3_4:42611848-42611867 None:intergenic 20.0%
!!! AATGTTGATGGAAATAAATA+AGG + chr3_4:42611849-42611868 None:intergenic 20.0%
!! CAAAAATTGATAAATGTTGA+TGG + chr3_4:42611861-42611880 None:intergenic 20.0%
! ATTAGAAATGATGATATGTG+AGG + chr3_4:42607951-42607970 None:intergenic 25.0%
!!! TTAATTTCAGTTTTCAAGCA+TGG - chr3_4:42608022-42608041 Msa0501430:three_prime_UTR 25.0%
! ATCAAATGAAAATTCTCAGT+TGG + chr3_4:42608251-42608270 None:intergenic 25.0%
!! TTCCCACTTATTCATTTTAA+AGG - chr3_4:42608542-42608561 Msa0501430:intron 25.0%
!!! CATCCTTTAAAATGAATAAG+TGG + chr3_4:42608548-42608567 None:intergenic 25.0%
!!! CACTTATTCATTTTAAAGGA+TGG - chr3_4:42608546-42608565 Msa0501430:intron 25.0%
!!! TTCACTAAATCACGTTTTTT+TGG + chr3_4:42609085-42609104 None:intergenic 25.0%
! AAAAAAACGTGATTTAGTGA+AGG - chr3_4:42609084-42609103 Msa0501430:CDS 25.0%
! GAAAAGTTATATACACTATC+CGG - chr3_4:42609155-42609174 Msa0501430:CDS 25.0%
! CATTCATTAAATGATGTATG+TGG + chr3_4:42609203-42609222 None:intergenic 25.0%
!! TCATTAAATTCACACTGATT+AGG + chr3_4:42609322-42609341 None:intergenic 25.0%
! TAATCAGTGTGAATTTAATG+AGG - chr3_4:42609321-42609340 Msa0501430:intron 25.0%
!! TGTTTGAAACATATATAGCT+TGG + chr3_4:42609831-42609850 None:intergenic 25.0%
!! TTTTAATCAGGAAACATACT+TGG + chr3_4:42610016-42610035 None:intergenic 25.0%
! TTAATGGCGTTTGAAAAATA+TGG - chr3_4:42610083-42610102 Msa0501430:CDS 25.0%
! GGTTAATTCAATTGAATAGA+TGG - chr3_4:42610104-42610123 Msa0501430:CDS 25.0%
! ATGTTTAACTCAATTCAGAT+GGG - chr3_4:42610540-42610559 Msa0501430:intron 25.0%
! AAAGAAACTTTCATGAAGTT+GGG + chr3_4:42610589-42610608 None:intergenic 25.0%
!! TACCAATAATTTTGCTGAAA+TGG - chr3_4:42610627-42610646 Msa0501430:intron 25.0%
! ATTAAATGCTTTCTTGAAAG+AGG - chr3_4:42610854-42610873 Msa0501430:intron 25.0%
! TCCAAATATCATTTATTCAG+TGG - chr3_4:42611037-42611056 Msa0501430:intron 25.0%
!!! AATCGGATAGTTTTTGAAAT+TGG - chr3_4:42611267-42611286 Msa0501430:intron 25.0%
! GTTATGTTCTATCTTATGTT+AGG - chr3_4:42611390-42611409 Msa0501430:intron 25.0%
! TTATTCTCGATGAAATGAAA+TGG - chr3_4:42611510-42611529 Msa0501430:intron 25.0%
! TATTCTCGATGAAATGAAAT+GGG - chr3_4:42611511-42611530 Msa0501430:intron 25.0%
! TATTTGTGCATGAGTAAAAT+TGG + chr3_4:42611679-42611698 None:intergenic 25.0%
!! ATGTCTCAATCAAGAAATTT+TGG - chr3_4:42611821-42611840 Msa0501430:CDS 25.0%
!!! TAAAATAACTGAAAGCACTT+GGG + chr3_4:42612090-42612109 None:intergenic 25.0%
!!! ATAAAATAACTGAAAGCACT+TGG + chr3_4:42612091-42612110 None:intergenic 25.0%
! AGAAAAACTGACTTTACTCA+AGG + chr3_4:42607992-42608011 None:intergenic 30.0%
! TCAATCTGTTCTACATTTTC+AGG - chr3_4:42608157-42608176 Msa0501430:CDS 30.0%
ATTTGATTGACATCATCCAA+AGG - chr3_4:42608264-42608283 Msa0501430:CDS 30.0%
TGGCTACTAACGAAATTAAT+TGG + chr3_4:42608365-42608384 None:intergenic 30.0%
TTGGTTATATTCTCTTTGGT+CGG - chr3_4:42608451-42608470 Msa0501430:intron 30.0%
AAGTTAGTGACTGAAATTAG+TGG - chr3_4:42608972-42608991 Msa0501430:intron 30.0%
AGTTAGTGACTGAAATTAGT+GGG - chr3_4:42608973-42608992 Msa0501430:CDS 30.0%
CTAACAAACACAATAAGACA+TGG - chr3_4:42609003-42609022 Msa0501430:CDS 30.0%
TTTAGTGAAGGAAATTAGCA+AGG - chr3_4:42609096-42609115 Msa0501430:CDS 30.0%
ATAATAAAGATCATAGCGAC+CGG + chr3_4:42609177-42609196 None:intergenic 30.0%
! AATTTTCGTCACTAATACGT+AGG - chr3_4:42609386-42609405 Msa0501430:CDS 30.0%
!! AGCGGTGATATATTTTAAGA+TGG - chr3_4:42609414-42609433 Msa0501430:CDS 30.0%
ATTGAGAGTAAAATATGGTG+AGG - chr3_4:42609675-42609694 Msa0501430:intron 30.0%
TTCTCCTTCAATACTTAGTT+GGG + chr3_4:42609734-42609753 None:intergenic 30.0%
AAGATGGTCTCAATGATTTA+GGG - chr3_4:42609752-42609771 Msa0501430:CDS 30.0%
AAACATATATAGCTTGGCTA+TGG + chr3_4:42609825-42609844 None:intergenic 30.0%
TTGACAAACCATAGTGAATA+GGG + chr3_4:42609864-42609883 None:intergenic 30.0%
! CTATGGTTTGTCAAGATTTA+TGG - chr3_4:42609870-42609889 Msa0501430:CDS 30.0%
ATTTGAAGGCTAAGAACAAA+TGG - chr3_4:42609914-42609933 Msa0501430:intron 30.0%
!! TTTTTCAAACGCCATTAACT+AGG + chr3_4:42610081-42610100 None:intergenic 30.0%
TTTCCTAAATTGATAGATGG+TGG - chr3_4:42610152-42610171 Msa0501430:CDS 30.0%
TTCCTAAATTGATAGATGGT+GGG - chr3_4:42610153-42610172 Msa0501430:CDS 30.0%
! ATAAACAAGAGAGATTGGTT+TGG + chr3_4:42610296-42610315 None:intergenic 30.0%
! GATGATATTTTCGATGTTCA+CGG - chr3_4:42610322-42610341 Msa0501430:CDS 30.0%
TATTTACAGAAGCTGTTAAC+AGG - chr3_4:42610365-42610384 Msa0501430:CDS 30.0%
GATGTTTAACTCAATTCAGA+TGG - chr3_4:42610539-42610558 Msa0501430:intron 30.0%
CAAAGAAACTTTCATGAAGT+TGG + chr3_4:42610590-42610609 None:intergenic 30.0%
GACCATTTCAGCAAAATTAT+TGG + chr3_4:42610632-42610651 None:intergenic 30.0%
!!! TTTCTTTTCTAGCTTAACCA+AGG - chr3_4:42610729-42610748 Msa0501430:intron 30.0%
! TGCAACAACGTTAAAACTTT+TGG - chr3_4:42610779-42610798 Msa0501430:intron 30.0%
! GCAACAACGTTAAAACTTTT+GGG - chr3_4:42610780-42610799 Msa0501430:intron 30.0%
ACAAACTTTGTATGAAACAG+TGG - chr3_4:42610823-42610842 Msa0501430:intron 30.0%
CAAACTTTGTATGAAACAGT+GGG - chr3_4:42610824-42610843 Msa0501430:intron 30.0%
GCCACTGAATAAATGATATT+TGG + chr3_4:42611041-42611060 None:intergenic 30.0%
TAACGTATGAGCTATAACTA+AGG + chr3_4:42611316-42611335 None:intergenic 30.0%
! GTATTTCAGATGCATTTTGA+TGG + chr3_4:42611628-42611647 None:intergenic 30.0%
CTGAGATGATTTCAAATGAA+TGG - chr3_4:42611796-42611815 Msa0501430:CDS 30.0%
!! AAAATAACTGAAAGCACTTG+GGG + chr3_4:42612089-42612108 None:intergenic 30.0%
GTGCAACTTCATAAAGTTCA+TGG + chr3_4:42608385-42608404 None:intergenic 35.0%
!! CAGGTTGGTTATATTCTCTT+TGG - chr3_4:42608447-42608466 Msa0501430:intron 35.0%
TATTTCGTCGCAACTAGTAA+GGG + chr3_4:42609130-42609149 None:intergenic 35.0%
TTATTTCGTCGCAACTAGTA+AGG + chr3_4:42609131-42609150 None:intergenic 35.0%
CGAAATTTATCCCACTCTAA+CGG - chr3_4:42609354-42609373 Msa0501430:intron 35.0%
TTAGTGACGAAAATTGTGAC+AGG + chr3_4:42609381-42609400 None:intergenic 35.0%
AAATATGGTGAGGATGTGAA+AGG - chr3_4:42609685-42609704 Msa0501430:intron 35.0%
CTTCTCCTTCAATACTTAGT+TGG + chr3_4:42609735-42609754 None:intergenic 35.0%
!! CTAAGTATTGAAGGAGAAGA+TGG - chr3_4:42609736-42609755 Msa0501430:CDS 35.0%
GAAGATGGTCTCAATGATTT+AGG - chr3_4:42609751-42609770 Msa0501430:CDS 35.0%
TGACAAACCATAGTGAATAG+GGG + chr3_4:42609863-42609882 None:intergenic 35.0%
CTTGACAAACCATAGTGAAT+AGG + chr3_4:42609865-42609884 None:intergenic 35.0%
TTCCCACCATCTATCAATTT+AGG + chr3_4:42610158-42610177 None:intergenic 35.0%
AATCTCACTTATCTTGATGC+AGG + chr3_4:42610450-42610469 None:intergenic 35.0%
AACTCAATTCAGATGGGAAA+TGG - chr3_4:42610546-42610565 Msa0501430:intron 35.0%
GAAATGGTCTACAAAAAGCA+TGG - chr3_4:42610643-42610662 Msa0501430:intron 35.0%
TTCAAGTATTCCTCAGTTGT+TGG + chr3_4:42610906-42610925 None:intergenic 35.0%
ACTGAGGAATACTTGAACAA+TGG - chr3_4:42610909-42610928 Msa0501430:intron 35.0%
! TCATGCTAAGGGTATAACAA+AGG - chr3_4:42610986-42611005 Msa0501430:intron 35.0%
TGATGATTTAGAAGGAGCTA+AGG - chr3_4:42611079-42611098 Msa0501430:intron 35.0%
TCCATGATTTGAATACTGCA+TGG - chr3_4:42611113-42611132 Msa0501430:intron 35.0%
TCCATGCAGTATTCAAATCA+TGG + chr3_4:42611117-42611136 None:intergenic 35.0%
AGCTCATACGTTAATGAACT+AGG - chr3_4:42611323-42611342 Msa0501430:intron 35.0%
GGAGGATGATTGAAAATACT+GGG + chr3_4:42611473-42611492 None:intergenic 35.0%
! ATAGAGTCAATATAATGGGG+AGG + chr3_4:42611491-42611510 None:intergenic 35.0%
ATACAGAGTGGAGATCAAAA+TGG - chr3_4:42611696-42611715 Msa0501430:CDS 35.0%
CTCTTATAATGGTACATGAG+AGG + chr3_4:42611906-42611925 None:intergenic 35.0%
CATGTTCCTTTAAACTAGAG+AGG + chr3_4:42611938-42611957 None:intergenic 35.0%
ATTGACATCATCCAAAGGCT+TGG - chr3_4:42608269-42608288 Msa0501430:CDS 40.0%
! ACCAACCTGCATTGACATAA+TGG + chr3_4:42608436-42608455 None:intergenic 40.0%
TGCCAACTTAACTATGCTCA+CGG + chr3_4:42608480-42608499 None:intergenic 40.0%
CAGATATGTTGCCGTATGTA+GGG - chr3_4:42608498-42608517 Msa0501430:intron 40.0%
ACTAATACGTAGGATGCTAG+CGG - chr3_4:42609396-42609415 Msa0501430:CDS 40.0%
TAGTTGGGATGCTTCATACA+AGG + chr3_4:42609719-42609738 None:intergenic 40.0%
!! GCATCCCAACTAAGTATTGA+AGG - chr3_4:42609727-42609746 Msa0501430:CDS 40.0%
CTTCAATCCCCTATTCACTA+TGG - chr3_4:42609853-42609872 Msa0501430:CDS 40.0%
GTCGCAGGTGTAAGAAAAAA+TGG + chr3_4:42610057-42610076 None:intergenic 40.0%
! CAGGGTATAATCCTCTGAAA+TGG - chr3_4:42610209-42610228 Msa0501430:CDS 40.0%
!! ATCCTCTGAAATGGTACATG+TGG - chr3_4:42610218-42610237 Msa0501430:CDS 40.0%
! ATCCATGCTTTTCGAACGAA+AGG - chr3_4:42610260-42610279 Msa0501430:CDS 40.0%
! TCCATGCTTTTCGAACGAAA+GGG - chr3_4:42610261-42610280 Msa0501430:CDS 40.0%
TTTCGATGTTCACGGAACAT+TGG - chr3_4:42610330-42610349 Msa0501430:CDS 40.0%
CAATTCAGATGGGAAATGGA+TGG - chr3_4:42610550-42610569 Msa0501430:intron 40.0%
!! TTCTAGCTTAACCAAGGTTC+TGG - chr3_4:42610735-42610754 Msa0501430:intron 40.0%
TGGATTCAAATCCAGAACCT+TGG + chr3_4:42610749-42610768 None:intergenic 40.0%
TCTGGATTTGAATCCAGCAT+TGG - chr3_4:42610753-42610772 Msa0501430:intron 40.0%
CTGGATTTGAATCCAGCATT+GGG - chr3_4:42610754-42610773 Msa0501430:intron 40.0%
CTTTCTTGAAAGAGGCTCAT+TGG - chr3_4:42610862-42610881 Msa0501430:intron 40.0%
! TGGCATTTTACCAACAACTG+AGG - chr3_4:42610893-42610912 Msa0501430:intron 40.0%
AACAATGGAATTGTGAGCAC+AGG - chr3_4:42610924-42610943 Msa0501430:intron 40.0%
TATCCATGCTTTCTTCCTCA+TGG - chr3_4:42610962-42610981 Msa0501430:intron 40.0%
TTCCTCATGGATCATGCTAA+GGG - chr3_4:42610975-42610994 Msa0501430:intron 40.0%
CGTCTCTCTGATGATTTAGA+AGG - chr3_4:42611071-42611090 Msa0501430:intron 40.0%
! AAGATCAAGAGCGATTTGGA+GGG + chr3_4:42611241-42611260 None:intergenic 40.0%
CTCTTGATCTTGGTCTCAAT+CGG - chr3_4:42611250-42611269 Msa0501430:intron 40.0%
GGGAGGATGATTGAAAATAC+TGG + chr3_4:42611474-42611493 None:intergenic 40.0%
ACTCATGCACAAATACAGAG+TGG - chr3_4:42611684-42611703 Msa0501430:CDS 40.0%
! GGAGATCAAAATGGTCTTGA+TGG - chr3_4:42611705-42611724 Msa0501430:CDS 40.0%
TTGCCTTAATGCTGCTAGAA+TGG - chr3_4:42611878-42611897 Msa0501430:intron 40.0%
GAACCATTCTAGCAGCATTA+AGG + chr3_4:42611884-42611903 None:intergenic 40.0%
CCTTTAAACTAGAGAGGCTT+GGG + chr3_4:42611932-42611951 None:intergenic 40.0%
TCCTTTAAACTAGAGAGGCT+TGG + chr3_4:42611933-42611952 None:intergenic 40.0%
AGTGTTCAATGCCAAGCCTT+TGG + chr3_4:42608283-42608302 None:intergenic 45.0%
CATTGAACACTACTTTGCCG+AGG - chr3_4:42608292-42608311 Msa0501430:CDS 45.0%
! AAGAGCCACTTTGATCTCCT+CGG + chr3_4:42608312-42608331 None:intergenic 45.0%
GCCATTATGTCAATGCAGGT+TGG - chr3_4:42608432-42608451 Msa0501430:intron 45.0%
CTCCGTGAGCATAGTTAAGT+TGG - chr3_4:42608475-42608494 Msa0501430:intron 45.0%
GCAGATATGTTGCCGTATGT+AGG - chr3_4:42608497-42608516 Msa0501430:intron 45.0%
TGAACTCTGAGCCCTACATA+CGG + chr3_4:42608512-42608531 None:intergenic 45.0%
CTTGAAGAAGCTCACAACTG+AGG + chr3_4:42609780-42609799 None:intergenic 45.0%
GTTGTGAGCTTCTTCAAGCA+TGG - chr3_4:42609782-42609801 Msa0501430:CDS 45.0%
GTTCATGAACTGAGCTATGC+TGG + chr3_4:42609971-42609990 None:intergenic 45.0%
ACCAAGGAGATGAAGTTTGC+AGG - chr3_4:42610190-42610209 Msa0501430:CDS 45.0%
CCAAGGAGATGAAGTTTGCA+GGG - chr3_4:42610191-42610210 Msa0501430:CDS 45.0%
GGATCCGTAAAACATGCCAT+GGG + chr3_4:42610244-42610263 None:intergenic 45.0%
TGGATCCGTAAAACATGCCA+TGG + chr3_4:42610245-42610264 None:intergenic 45.0%
ACCCTTTCGTTCGAAAAGCA+TGG + chr3_4:42610265-42610284 None:intergenic 45.0%
GATCCATGAGGAAGAAAGCA+TGG + chr3_4:42610968-42610987 None:intergenic 45.0%
CTTCCTCATGGATCATGCTA+AGG - chr3_4:42610974-42610993 Msa0501430:intron 45.0%
TACCCTTAGCATGATCCATG+AGG + chr3_4:42610980-42610999 None:intergenic 45.0%
! CAAGATCAAGAGCGATTTGG+AGG + chr3_4:42611242-42611261 None:intergenic 45.0%
CTCCAAATCGCTCTTGATCT+TGG - chr3_4:42611240-42611259 Msa0501430:intron 45.0%
GACCAAGATCAAGAGCGATT+TGG + chr3_4:42611245-42611264 None:intergenic 45.0%
! GGCTTGGGTTGCTCTTATAA+TGG + chr3_4:42611917-42611936 None:intergenic 45.0%
! CCCAAGCCTCTCTAGTTTAA+AGG - chr3_4:42611929-42611948 Msa0501430:intron 45.0%
!!! TATTTATTTATTTATTTTTG+AGG - chr3_4:42608059-42608078 Msa0501430:three_prime_UTR 5.0%
!!! ATTTATTTATTTATTTTTGA+GGG - chr3_4:42608060-42608079 Msa0501430:three_prime_UTR 5.0%
!! AAAAAAAAAAAATTATCTTT+GGG - chr3_4:42608592-42608611 Msa0501430:intron 5.0%
!!! ATTTACTATTTTTTTTTTAT+GGG + chr3_4:42611544-42611563 None:intergenic 5.0%
!!! TATTTACTATTTTTTTTTTA+TGG + chr3_4:42611545-42611564 None:intergenic 5.0%
CTTTGCCGAGGAGATCAAAG+TGG - chr3_4:42608304-42608323 Msa0501430:CDS 50.0%
GGAGGCCATTATGTCAATGC+AGG - chr3_4:42608428-42608447 Msa0501430:intron 50.0%
TGTGACAGGACCGTTAGAGT+GGG + chr3_4:42609367-42609386 None:intergenic 50.0%
TTGTGACAGGACCGTTAGAG+TGG + chr3_4:42609368-42609387 None:intergenic 50.0%
CACCTGCGACACCTAGTTAA+TGG - chr3_4:42610067-42610086 Msa0501430:CDS 50.0%
!! GATAGATGGTGGGAAGACCT+TGG - chr3_4:42610163-42610182 Msa0501430:CDS 50.0%
TCATCTCCTTGGTCAGTCCA+AGG + chr3_4:42610183-42610202 None:intergenic 50.0%
CCCTGCAAACTTCATCTCCT+TGG + chr3_4:42610194-42610213 None:intergenic 50.0%
GGCCACATGTACCATTTCAG+AGG + chr3_4:42610223-42610242 None:intergenic 50.0%
GAAATGGTACATGTGGCCCA+TGG - chr3_4:42610225-42610244 Msa0501430:CDS 50.0%
! GTGGCCCATGGCATGTTTTA+CGG - chr3_4:42610237-42610256 Msa0501430:CDS 50.0%
! GAGGCTCATTGGCTGAATTC+TGG - chr3_4:42610873-42610892 Msa0501430:intron 50.0%
GCATTCCGCTTGCTCAGACA+AGG - chr3_4:42608407-42608426 Msa0501430:intron 55.0%
TTCCGCTTGCTCAGACAAGG+AGG - chr3_4:42608410-42608429 Msa0501430:intron 55.0%
! CGCCATTAACTAGGTGTCGC+AGG + chr3_4:42610072-42610091 None:intergenic 55.0%
GGAAGACCTTGGACTGACCA+AGG - chr3_4:42610174-42610193 Msa0501430:CDS 55.0%
CGTTGTTGCATGCCCAATGC+TGG + chr3_4:42610769-42610788 None:intergenic 55.0%
GGCCTCCTTGTCTGAGCAAG+CGG + chr3_4:42608415-42608434 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 42607934 42612139 42607934 ID=Msa0501430;Name=Msa0501430
chr3_4 mRNA 42607934 42612139 42607934 ID=Msa0501430-mRNA-1;Parent=Msa0501430;Name=Msa0501430-mRNA-1;_AED=0.10;_eAED=0.10;_QI=107|1|1|1|1|1|7|162|513
chr3_4 exon 42607934 42608371 42607934 ID=Msa0501430-mRNA-1:exon:8993;Parent=Msa0501430-mRNA-1
chr3_4 exon 42608973 42609230 42608973 ID=Msa0501430-mRNA-1:exon:8992;Parent=Msa0501430-mRNA-1
chr3_4 exon 42609377 42609515 42609377 ID=Msa0501430-mRNA-1:exon:8991;Parent=Msa0501430-mRNA-1
chr3_4 exon 42609687 42609905 42609687 ID=Msa0501430-mRNA-1:exon:8990;Parent=Msa0501430-mRNA-1
chr3_4 exon 42610057 42610432 42610057 ID=Msa0501430-mRNA-1:exon:8989;Parent=Msa0501430-mRNA-1
chr3_4 exon 42611624 42611894 42611624 ID=Msa0501430-mRNA-1:exon:8988;Parent=Msa0501430-mRNA-1
chr3_4 exon 42612030 42612139 42612030 ID=Msa0501430-mRNA-1:exon:8987;Parent=Msa0501430-mRNA-1
chr3_4 five_prime_UTR 42612033 42612139 42612033 ID=Msa0501430-mRNA-1:five_prime_utr;Parent=Msa0501430-mRNA-1
chr3_4 CDS 42612030 42612032 42612030 ID=Msa0501430-mRNA-1:cds;Parent=Msa0501430-mRNA-1
chr3_4 CDS 42611624 42611894 42611624 ID=Msa0501430-mRNA-1:cds;Parent=Msa0501430-mRNA-1
chr3_4 CDS 42610057 42610432 42610057 ID=Msa0501430-mRNA-1:cds;Parent=Msa0501430-mRNA-1
chr3_4 CDS 42609687 42609905 42609687 ID=Msa0501430-mRNA-1:cds;Parent=Msa0501430-mRNA-1
chr3_4 CDS 42609377 42609515 42609377 ID=Msa0501430-mRNA-1:cds;Parent=Msa0501430-mRNA-1
chr3_4 CDS 42608973 42609230 42608973 ID=Msa0501430-mRNA-1:cds;Parent=Msa0501430-mRNA-1
chr3_4 CDS 42608096 42608371 42608096 ID=Msa0501430-mRNA-1:cds;Parent=Msa0501430-mRNA-1
chr3_4 three_prime_UTR 42607934 42608095 42607934 ID=Msa0501430-mRNA-1:three_prime_utr;Parent=Msa0501430-mRNA-1
Gene Sequence

>Msa0501430

ATGGATGCTATTTATGTCAAGCAAGCTTTGTTGTGTAAACAAGTTCACAAGAAACTTGTTATTAGTGAAGATCCAACTGAGAATTTTCATTTGATTGACATCATCCAAAGGCTTGGCATTGAACACTACTTTGCCGAGGAGATCAAAGTGGCTCTTGAAAAACAATTTTTGATATTGAGCAGCAATCCAATTAATTTCGTTAGTAGCCATGAACTTTATGAAGTTGCACTTGCATTCCGCTTGCTCAGACAAGGAGGCCATTATGTCAATGCAGAGTTATTTGACTGCTTGAAGTGTAGCCAAAAATCATTGAGAGTAAAATATGGTGAGGATGTGAAAGGTCTCATTGCCTTGTATGAAGCATCCCAACTAAGTATTGAAGGAGAAGATGGTCTCAATGATTTAGGGCACCTCAGTTGTGAGCTTCTTCAAGCATGGCTTTCAAGACATCAAGACCATAGCCAAGCTATATATGTTTCAAACACTCTTCAATCCCCTATTCACTATGGTTTGTCAAGATTTATGGATAAAAGCATATTCATTAATGATTTGAAGGCTAAGAACAAATGGATCTGTTTAGATGAACTTGCTAAAATCAATTCCAGCATAGCTCAGTTCATGAACAAAAATGAGAGCGTTGAAGTTTCCAAATGGTGGGAAGACCTTGGACTGACCAAGGAGATGAAGTTTGCAGGGTATAATCCTCTGAAATGGTACATGTGGCCCATGGCATGTTTTACGGATCCATGCTTTTCGAACGAAAGGGTTGAGCTCACCAAACCAATCTCTCTTGTTTATATTATTGATGATATTTTCGATGTTCACGGAACATTGGATCAACTTACTCTATTTACAGAAGCTGTTAACAGATGGGAAATGGATGGTGCAGAGAATCTTCCCAACTTCATGAAAGTTTCTTTGAGTTCTCTTTACAAAGTTACCAATAATTTTGCTGAAATGGTCTACAAAAAGCATGGATTCAACCCTATAGATACACTAAAAATATCGTGGGTGCGCTTATTAAATGCTTTCTTGAAAGAGGCTCATTGGCTGAATTCTGGCATTTTACCAACAACTGAGGAATACTTGAACAATGGAATTGTGAGCACAGGAGTTCATGTTGTACTTATCCATGCTTTCTTCCTCATGGATCATGCTAAGGGTATAACAAAGGAAACTATTTCTATCTTAGATGAAGAATTTCCAAATATCATTTATTCAGTGGCAAAAATTCTTCGTCTCTCTGATGATTTAGAAGGAGCTAAGAGTGGAGATCAAAATGGTCTTGATGGATCTTATCTTAATTGCTACATGAGTGAGCACAAAGATATTTCATGTGAAGATGTGCAAAGACATGTTGCTGAGATGATTTCAAATGAATGGAAATGTCTCAATCAAGAAATTTTGGACCCTTATTTATTTCCATCAACATTTATCAATTTTTGCCTTAATGCTGCTAGAATGGTTCCTCTCATGTACCATTATAAGAGCAACCCAAGCCTCTCTAGTTTAAAGGAACATGTCAAGTCATTGATTAAATAA
Protein sequence

>Msa0501430

MDAIYVKQALLCKQVHKKLVISEDPTENFHLIDIIQRLGIEHYFAEEIKVALEKQFLILSSNPINFVSSHELYEVALAFRLLRQGGHYVNAELFDCLKCSQKSLRVKYGEDVKGLIALYEASQLSIEGEDGLNDLGHLSCELLQAWLSRHQDHSQAIYVSNTLQSPIHYGLSRFMDKSIFINDLKAKNKWICLDELAKINSSIAQFMNKNESVEVSKWWEDLGLTKEMKFAGYNPLKWYMWPMACFTDPCFSNERVELTKPISLVYIIDDIFDVHGTLDQLTLFTEAVNRWEMDGAENLPNFMKVSLSSLYKVTNNFAEMVYKKHGFNPIDTLKISWVRLLNAFLKEAHWLNSGILPTTEEYLNNGIVSTGVHVVLIHAFFLMDHAKGITKETISILDEEFPNIIYSVAKILRLSDDLEGAKSGDQNGLDGSYLNCYMSEHKDISCEDVQRHVAEMISNEWKCLNQEILDPYLFPSTFINFCLNAARMVPLMYHYKSNPSLSSLKEHVKSLIK*