Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684920 | XP_013456242.1 | 96.767 | 464 | 15 | 0 | 1 | 464 | 1 | 464 | 0.0 | 930 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684920 | sp|O24370|LOX21_SOLTU | 56.075 | 428 | 171 | 6 | 44 | 465 | 42 | 458 | 9.18e-161 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684920 | A0A072UMH4 | 96.767 | 464 | 15 | 0 | 1 | 464 | 1 | 464 | 0.0 | 930 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003450 | Msa0684920 | 0.802722 | 4.901386e-49 | -8.615850e-47 |
| Msa0021980 | Msa0684920 | 0.806439 | 8.222987e-50 | -8.615850e-47 |
| Msa0025060 | Msa0684920 | 0.820347 | 7.194838e-53 | -8.615850e-47 |
| Msa0025090 | Msa0684920 | 0.847164 | 1.375356e-59 | -8.615850e-47 |
| Msa0026120 | Msa0684920 | 0.842845 | 2.016590e-58 | -8.615850e-47 |
| Msa0030320 | Msa0684920 | 0.826925 | 2.075645e-54 | -8.615850e-47 |
| Msa0046670 | Msa0684920 | 0.801542 | 8.574438e-49 | -8.615850e-47 |
| Msa0053480 | Msa0684920 | 0.806195 | 9.253693e-50 | -8.615850e-47 |
| Msa0070090 | Msa0684920 | 0.825776 | 3.897592e-54 | -8.615850e-47 |
| Msa0072590 | Msa0684920 | 0.808564 | 2.911134e-50 | -8.615850e-47 |
| Msa0077920 | Msa0684920 | 0.839398 | 1.623023e-57 | -8.615850e-47 |
| Msa0090350 | Msa0684920 | 0.810394 | 1.178171e-50 | -8.615850e-47 |
| Msa0110350 | Msa0684920 | 0.814810 | 1.274684e-51 | -8.615850e-47 |
| Msa0112800 | Msa0684920 | 0.838743 | 2.399260e-57 | -8.615850e-47 |
| Msa0117300 | Msa0684920 | 0.814620 | 1.404216e-51 | -8.615850e-47 |
| Msa0604130 | Msa0684920 | 0.964548 | 1.820039e-123 | -8.615850e-47 |
| Msa0604890 | Msa0684920 | 0.830075 | 3.602621e-55 | -8.615850e-47 |
| Msa0607620 | Msa0684920 | 0.862143 | 6.241995e-64 | -8.615850e-47 |
| Msa0610850 | Msa0684920 | 0.820497 | 6.646749e-53 | -8.615850e-47 |
| Msa0617470 | Msa0684920 | 0.824102 | 9.680633e-54 | -8.615850e-47 |
| Msa0629960 | Msa0684920 | 0.801685 | 8.013356e-49 | -8.615850e-47 |
| Msa0636750 | Msa0684920 | 0.971126 | 1.126933e-132 | -8.615850e-47 |
| Msa0636760 | Msa0684920 | 0.983499 | 6.549926e-158 | -8.615850e-47 |
| Msa0639880 | Msa0684920 | 0.812461 | 4.191721e-51 | -8.615850e-47 |
| Msa0641020 | Msa0684920 | 0.817176 | 3.777335e-52 | -8.615850e-47 |
| Msa0641030 | Msa0684920 | 0.830386 | 3.023300e-55 | -8.615850e-47 |
| Msa0645460 | Msa0684920 | 0.930528 | 1.436236e-93 | -8.615850e-47 |
| Msa0646180 | Msa0684920 | 0.822716 | 2.041560e-53 | -8.615850e-47 |
| Msa0647860 | Msa0684920 | 0.830830 | 2.354969e-55 | -8.615850e-47 |
| Msa0648160 | Msa0684920 | 0.823881 | 1.091035e-53 | -8.615850e-47 |
| Msa0648170 | Msa0684920 | 0.810474 | 1.132089e-50 | -8.615850e-47 |
| Msa0648200 | Msa0684920 | 0.815877 | 7.381553e-52 | -8.615850e-47 |
| Msa0648260 | Msa0684920 | 0.802305 | 5.976545e-49 | -8.615850e-47 |
| Msa0648300 | Msa0684920 | 0.800432 | 1.445595e-48 | -8.615850e-47 |
| Msa0649530 | Msa0684920 | 0.818047 | 2.403297e-52 | -8.615850e-47 |
| Msa0651340 | Msa0684920 | 0.817529 | 3.146174e-52 | -8.615850e-47 |
| Msa0664110 | Msa0684920 | 0.812008 | 5.261639e-51 | -8.615850e-47 |
| Msa0664130 | Msa0684920 | 0.803945 | 2.735282e-49 | -8.615850e-47 |
| Msa0679560 | Msa0684920 | 0.808918 | 2.445270e-50 | -8.615850e-47 |
| Msa0684910 | Msa0684920 | 0.957606 | 1.807728e-115 | -8.615850e-47 |
| Msa0684920 | Msa0690580 | 0.852921 | 3.360669e-61 | -8.615850e-47 |
| Msa0684920 | Msa0691140 | 0.833386 | 5.496087e-56 | -8.615850e-47 |
| Msa0684920 | Msa0691180 | 0.820351 | 7.180631e-53 | -8.615850e-47 |
| Msa0684920 | Msa0693560 | 0.807738 | 4.364761e-50 | -8.615850e-47 |
| Msa0684920 | Msa0697490 | 0.818749 | 1.666350e-52 | -8.615850e-47 |
| Msa0684920 | Msa0700250 | 0.833381 | 5.511827e-56 | -8.615850e-47 |
| Msa0684920 | Msa0713530 | 0.806458 | 8.148178e-50 | -8.615850e-47 |
| Msa0684920 | Msa0722660 | 0.835649 | 1.483629e-56 | -8.615850e-47 |
| Msa0684920 | Msa0734190 | 0.818035 | 2.418317e-52 | -8.615850e-47 |
| Msa0684920 | Msa0752540 | 0.814695 | 1.351743e-51 | -8.615850e-47 |
| Msa0684920 | Msa0756940 | 0.812730 | 3.659724e-51 | -8.615850e-47 |
| Msa0684920 | Msa0775420 | 0.812877 | 3.399121e-51 | -8.615850e-47 |
| Msa0684920 | Msa0797210 | 0.803714 | 3.056223e-49 | -8.615850e-47 |
| Msa0684920 | Msa0812800 | 0.809291 | 2.034486e-50 | -8.615850e-47 |
| Msa0684920 | Msa0833080 | 0.817219 | 3.692980e-52 | -8.615850e-47 |
| Msa0684920 | Msa0836510 | 0.819358 | 1.210917e-52 | -8.615850e-47 |
| Msa0684920 | Msa0853150 | 0.808081 | 3.690735e-50 | -8.615850e-47 |
| Msa0684920 | Msa0883390 | 0.805033 | 1.622610e-49 | -8.615850e-47 |
| Msa0684920 | Msa0912160 | 0.810233 | 1.276395e-50 | -8.615850e-47 |
| Msa0684920 | Msa0912470 | 0.801396 | 9.183285e-49 | -8.615850e-47 |
| Msa0684920 | Msa0930090 | 0.825884 | 3.674498e-54 | -8.615850e-47 |
| Msa0684920 | Msa0957800 | 0.818391 | 2.009304e-52 | -8.615850e-47 |
| Msa0684920 | Msa0966540 | 0.800051 | 1.728128e-48 | -8.615850e-47 |
| Msa0684920 | Msa0984820 | 0.810006 | 1.428661e-50 | -8.615850e-47 |
| Msa0684920 | Msa0984830 | 0.813609 | 2.347255e-51 | -8.615850e-47 |
| Msa0684920 | Msa0998940 | 0.801540 | 8.580304e-49 | -8.615850e-47 |
| Msa0684920 | Msa1008960 | 0.831011 | 2.124990e-55 | -8.615850e-47 |
| Msa0684920 | Msa1009020 | 0.805563 | 1.256682e-49 | -8.615850e-47 |
| Msa0684920 | Msa1018720 | 0.828779 | 7.435420e-55 | -8.615850e-47 |
| Msa0684920 | Msa1031220 | 0.815826 | 7.577551e-52 | -8.615850e-47 |
| Msa0684920 | Msa1033670 | 0.827094 | 1.891363e-54 | -8.615850e-47 |
| Msa0684920 | Msa1036360 | 0.844314 | 8.162877e-59 | -8.615850e-47 |
| Msa0684920 | Msa1038570 | 0.844588 | 6.887686e-59 | -8.615850e-47 |
| Msa0684920 | Msa1038580 | 0.843821 | 1.107023e-58 | -8.615850e-47 |
| Msa0684920 | Msa1038610 | 0.813867 | 2.059064e-51 | -8.615850e-47 |
| Msa0684920 | Msa1050320 | 0.833615 | 4.816791e-56 | -8.615850e-47 |
| Msa0684920 | Msa1055710 | 0.827385 | 1.610951e-54 | -8.615850e-47 |
| Msa0684920 | Msa1076640 | 0.844683 | 6.496199e-59 | -8.615850e-47 |
| Msa0684920 | Msa1103610 | 0.826486 | 2.642800e-54 | -8.615850e-47 |
| Msa0684920 | Msa1113210 | 0.806119 | 9.602765e-50 | -8.615850e-47 |
| Msa0684920 | Msa1129130 | 0.805588 | 1.241688e-49 | -8.615850e-47 |
| Msa0684920 | Msa1129160 | 0.836600 | 8.508440e-57 | -8.615850e-47 |
| Msa0684920 | Msa1129470 | 0.827662 | 1.382609e-54 | -8.615850e-47 |
| Msa0684920 | Msa1133670 | 0.804914 | 1.718034e-49 | -8.615850e-47 |
| Msa0684920 | Msa1147190 | 0.851572 | 8.133300e-61 | -8.615850e-47 |
| Msa0684920 | Msa1175850 | 0.800057 | 1.722689e-48 | -8.615850e-47 |
| Msa0684920 | Msa1177360 | 0.824359 | 8.425845e-54 | -8.615850e-47 |
| Msa0684920 | Msa1179130 | 0.803985 | 2.684518e-49 | -8.615850e-47 |
| Msa0684920 | Msa1182400 | 0.812485 | 4.139679e-51 | -8.615850e-47 |
| Msa0684920 | Msa1192790 | 0.816544 | 5.235007e-52 | -8.615850e-47 |
| Msa0684920 | Msa1199750 | 0.827801 | 1.279787e-54 | -8.615850e-47 |
| Msa0684920 | Msa1208250 | 0.816942 | 4.262676e-52 | -8.615850e-47 |
| Msa0684920 | Msa1211280 | 0.848017 | 8.013325e-60 | -8.615850e-47 |
| Msa0684920 | Msa1211370 | 0.813444 | 2.552056e-51 | -8.615850e-47 |
| Msa0684920 | Msa1213130 | 0.811337 | 7.361936e-51 | -8.615850e-47 |
| Msa0684920 | Msa1213240 | 0.807720 | 4.403560e-50 | -8.615850e-47 |
| Msa0684920 | Msa1216700 | 0.808449 | 3.080410e-50 | -8.615850e-47 |
| Msa0684920 | Msa1230190 | 0.819491 | 1.129748e-52 | -8.615850e-47 |
| Msa0684920 | Msa1235940 | 0.828345 | 9.467304e-55 | -8.615850e-47 |
| Msa0684920 | Msa1236740 | 0.810234 | 1.275653e-50 | -8.615850e-47 |
| Msa0684920 | Msa1260510 | 0.800581 | 1.347809e-48 | -8.615850e-47 |
| Msa0684920 | Msa1272770 | 0.801182 | 1.016000e-48 | -8.615850e-47 |
| Msa0684920 | Msa1277580 | 0.827578 | 1.447693e-54 | -8.615850e-47 |
| Msa0684920 | Msa1279310 | 0.813925 | 1.999641e-51 | -8.615850e-47 |
| Msa0684920 | Msa1294470 | 0.811053 | 8.485458e-51 | -8.615850e-47 |
| Msa0684920 | Msa1300220 | 0.828457 | 8.893842e-55 | -8.615850e-47 |
| Msa0684920 | Msa1300360 | 0.800096 | 1.691749e-48 | -8.615850e-47 |
| Msa0684920 | Msa1308460 | 0.805104 | 1.567958e-49 | -8.615850e-47 |
| Msa0684920 | Msa1326900 | 0.809610 | 1.737767e-50 | -8.615850e-47 |
| Msa0684920 | Msa1327400 | 0.817926 | 2.559398e-52 | -8.615850e-47 |
| Msa0684920 | Msa1327420 | 0.815968 | 7.042876e-52 | -8.615850e-47 |
| Msa0684920 | Msa1328600 | 0.828633 | 8.067085e-55 | -8.615850e-47 |
| Msa0684920 | Msa1329020 | 0.802058 | 6.717259e-49 | -8.615850e-47 |
| Msa0684920 | Msa1329820 | 0.835901 | 1.281059e-56 | -8.615850e-47 |
| Msa0684920 | Msa1346920 | 0.802434 | 5.620207e-49 | -8.615850e-47 |
| Msa0684920 | Msa1349410 | 0.836219 | 1.063653e-56 | -8.615850e-47 |
| Msa0684920 | Msa1352550 | 0.802441 | 5.601721e-49 | -8.615850e-47 |
| Msa0684920 | Msa1357380 | 0.819643 | 1.042623e-52 | -8.615850e-47 |
| Msa0684920 | Msa1359880 | 0.826770 | 2.260321e-54 | -8.615850e-47 |
| Msa0684920 | Msa1391600 | 0.829349 | 5.410671e-55 | -8.615850e-47 |
| Msa0684920 | Msa1395360 | 0.853448 | 2.373800e-61 | -8.615850e-47 |
| Msa0684920 | Msa1395700 | 0.801365 | 9.320133e-49 | -8.615850e-47 |
| Msa0684920 | Msa1413880 | 0.837448 | 5.166947e-57 | -8.615850e-47 |
| Msa0684920 | Msa1432250 | 0.822603 | 2.168818e-53 | -8.615850e-47 |
| Msa0684920 | Msa1433380 | 0.824440 | 8.063628e-54 | -8.615850e-47 |
| Msa0684920 | Msa1433650 | 0.804800 | 1.815009e-49 | -8.615850e-47 |
| Msa0684920 | Msa1443440 | 0.832928 | 7.142305e-56 | -8.615850e-47 |
| Msa0684920 | Msa1445250 | 0.835245 | 1.877010e-56 | -8.615850e-47 |
| Msa0684920 | Msa1445700 | 0.824543 | 7.626166e-54 | -8.615850e-47 |
| Msa0684920 | Msa1450850 | 0.814430 | 1.546658e-51 | -8.615850e-47 |
| Msa0684920 | Msa1454320 | 0.844973 | 5.423718e-59 | -8.615850e-47 |
| Msa0684920 | Msa1454330 | 0.865099 | 7.550119e-65 | -8.615850e-47 |
| Msa0684920 | Msa1459170 | 0.800753 | 1.243305e-48 | -8.615850e-47 |
| Msa0684920 | Msa1460530 | 0.817020 | 4.093716e-52 | -8.615850e-47 |
| Msa0125810 | Msa0684920 | 0.836832 | 7.427376e-57 | -8.615850e-47 |
| Msa0146490 | Msa0684920 | 0.810833 | 9.471602e-51 | -8.615850e-47 |
| Msa0160650 | Msa0684920 | 0.808511 | 2.988381e-50 | -8.615850e-47 |
| Msa0166580 | Msa0684920 | 0.837853 | 4.067364e-57 | -8.615850e-47 |
| Msa0170450 | Msa0684920 | 0.853449 | 2.371630e-61 | -8.615850e-47 |
| Msa0184030 | Msa0684920 | 0.826140 | 3.193336e-54 | -8.615850e-47 |
| Msa0194870 | Msa0684920 | 0.801266 | 9.765110e-49 | -8.615850e-47 |
| Msa0194900 | Msa0684920 | 0.804858 | 1.765182e-49 | -8.615850e-47 |
| Msa0198140 | Msa0684920 | 0.833156 | 6.267835e-56 | -8.615850e-47 |
| Msa0198220 | Msa0684920 | 0.829495 | 4.986453e-55 | -8.615850e-47 |
| Msa0201910 | Msa0684920 | 0.820259 | 7.537596e-53 | -8.615850e-47 |
| Msa0207220 | Msa0684920 | 0.802592 | 5.214715e-49 | -8.615850e-47 |
| Msa0211520 | Msa0684920 | 0.814274 | 1.674376e-51 | -8.615850e-47 |
| Msa0225370 | Msa0684920 | 0.812871 | 3.408489e-51 | -8.615850e-47 |
| Msa0365360 | Msa0684920 | 0.822804 | 1.947544e-53 | -8.615850e-47 |
| Msa0378620 | Msa0684920 | 0.803391 | 3.565744e-49 | -8.615850e-47 |
| Msa0387180 | Msa0684920 | -0.807940 | 3.953768e-50 | -8.615850e-47 |
| Msa0436590 | Msa0684920 | 0.801210 | 1.002355e-48 | -8.615850e-47 |
| Msa0451370 | Msa0684920 | 0.829640 | 4.598227e-55 | -8.615850e-47 |
| Msa0452010 | Msa0684920 | 0.815497 | 8.967736e-52 | -8.615850e-47 |
| Msa0457370 | Msa0684920 | 0.802349 | 5.852564e-49 | -8.615850e-47 |
| Msa0468050 | Msa0684920 | -0.840713 | 7.365076e-58 | -8.615850e-47 |
| Msa0481320 | Msa0684920 | 0.804639 | 1.961683e-49 | -8.615850e-47 |
| Msa0244370 | Msa0684920 | 0.823733 | 1.181638e-53 | -8.615850e-47 |
| Msa0251140 | Msa0684920 | 0.806804 | 6.884295e-50 | -8.615850e-47 |
| Msa0251790 | Msa0684920 | 0.819689 | 1.018105e-52 | -8.615850e-47 |
| Msa0265620 | Msa0684920 | 0.800921 | 1.148685e-48 | -8.615850e-47 |
| Msa0266380 | Msa0684920 | 0.816630 | 5.009220e-52 | -8.615850e-47 |
| Msa0278340 | Msa0684920 | 0.825995 | 3.458156e-54 | -8.615850e-47 |
| Msa0282880 | Msa0684920 | 0.830132 | 3.487584e-55 | -8.615850e-47 |
| Msa0288280 | Msa0684920 | 0.805364 | 1.383163e-49 | -8.615850e-47 |
| Msa0290850 | Msa0684920 | 0.829558 | 4.813330e-55 | -8.615850e-47 |
| Msa0315390 | Msa0684920 | 0.807340 | 5.302671e-50 | -8.615850e-47 |
| Msa0321180 | Msa0684920 | 0.833466 | 5.248088e-56 | -8.615850e-47 |
| Msa0321200 | Msa0684920 | 0.831878 | 1.300329e-55 | -8.615850e-47 |
| Msa0328840 | Msa0684920 | 0.863779 | 1.951448e-64 | -8.615850e-47 |
| Msa0340530 | Msa0684920 | 0.806934 | 6.464091e-50 | -8.615850e-47 |
| Msa0343200 | Msa0684920 | 0.830873 | 2.298521e-55 | -8.615850e-47 |
| Msa0351600 | Msa0684920 | 0.803874 | 2.830494e-49 | -8.615850e-47 |
| Msa0359230 | Msa0684920 | 0.813925 | 1.999207e-51 | -8.615850e-47 |
| Msa0483160 | Msa0684920 | 0.836256 | 1.041067e-56 | -8.615850e-47 |
| Msa0501430 | Msa0684920 | 0.810813 | 9.563610e-51 | -8.615850e-47 |
| Msa0521100 | Msa0684920 | 0.805233 | 1.473457e-49 | -8.615850e-47 |
| Msa0544930 | Msa0684920 | 0.816061 | 6.716185e-52 | -8.615850e-47 |
| Msa0549550 | Msa0684920 | 0.835611 | 1.516831e-56 | -8.615850e-47 |
| Msa0553570 | Msa0684920 | 0.842256 | 2.889731e-58 | -8.615850e-47 |
| Msa0554410 | Msa0684920 | 0.821421 | 4.073493e-53 | -8.615850e-47 |
| Msa0555510 | Msa0684920 | 0.816601 | 5.085110e-52 | -8.615850e-47 |
| Msa0555880 | Msa0684920 | 0.806511 | 7.939403e-50 | -8.615850e-47 |
| Msa0563230 | Msa0684920 | 0.843878 | 1.068596e-58 | -8.615850e-47 |
| Msa0575540 | Msa0684920 | 0.832306 | 1.019339e-55 | -8.615850e-47 |
| Msa0578890 | Msa0684920 | 0.810508 | 1.113108e-50 | -8.615850e-47 |
| Msa0595240 | Msa0684920 | 0.803474 | 3.426659e-49 | -8.615850e-47 |
| Msa0597300 | Msa0684920 | 0.800647 | 1.306365e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684920 | MtrunA17_Chr4g0033171 | 97.647 | 255 | 6 | 0 | 211 | 465 | 30 | 284 | 1.49e-180 | 523 |
| Msa0684920 | MtrunA17_Chr4g0033181 | 94.787 | 211 | 11 | 0 | 1 | 211 | 1 | 211 | 8.25e-145 | 414 |
| Msa0684920 | MtrunA17_Chr3g0118651 | 51.214 | 412 | 186 | 6 | 59 | 465 | 62 | 463 | 1.86e-142 | 431 |
| Msa0684920 | MtrunA17_Chr3g0118641 | 49.111 | 450 | 214 | 7 | 21 | 465 | 23 | 462 | 1.34e-141 | 428 |
| Msa0684920 | MtrunA17_Chr3g0118621 | 53.750 | 400 | 178 | 6 | 70 | 465 | 28 | 424 | 1.45e-141 | 427 |
| Msa0684920 | MtrunA17_Chr8g0344201 | 43.641 | 401 | 214 | 7 | 74 | 464 | 90 | 488 | 8.46e-103 | 328 |
| Msa0684920 | MtrunA17_Chr8g0377101 | 41.667 | 396 | 218 | 7 | 72 | 457 | 77 | 469 | 2.03e-98 | 316 |
| Msa0684920 | MtrunA17_Chr8g0343011 | 41.114 | 377 | 204 | 8 | 98 | 465 | 59 | 426 | 1.48e-79 | 265 |
| Msa0684920 | MtrunA17_Chr8g0344211 | 40.053 | 377 | 213 | 7 | 98 | 465 | 57 | 429 | 1.34e-77 | 259 |
| Msa0684920 | MtrunA17_Chr8g0342881 | 40.420 | 381 | 206 | 10 | 98 | 465 | 45 | 417 | 6.20e-77 | 257 |
| Msa0684920 | MtrunA17_Chr1g0205611 | 38.860 | 386 | 215 | 11 | 98 | 465 | 31 | 413 | 9.21e-76 | 254 |
| Msa0684920 | MtrunA17_Chr8g0342921 | 39.286 | 392 | 217 | 10 | 84 | 465 | 49 | 429 | 6.03e-75 | 252 |
| Msa0684920 | MtrunA17_Chr2g0329901 | 37.381 | 420 | 230 | 11 | 52 | 452 | 10 | 415 | 7.48e-73 | 246 |
| Msa0684920 | MtrunA17_Chr2g0329911 | 35.981 | 428 | 246 | 12 | 52 | 465 | 10 | 423 | 1.70e-72 | 245 |
| Msa0684920 | MtrunA17_Chr8g0342971 | 37.215 | 438 | 245 | 13 | 46 | 465 | 6 | 431 | 1.25e-71 | 243 |
| Msa0684920 | MtrunA17_Chr8g0342891 | 37.831 | 378 | 220 | 8 | 98 | 465 | 50 | 422 | 7.12e-71 | 241 |
| Msa0684920 | MtrunA17_Chr8g0342931 | 43.038 | 316 | 170 | 7 | 155 | 465 | 1 | 311 | 1.36e-70 | 238 |
| Msa0684920 | MtrunA17_Chr5g0406871 | 34.624 | 439 | 254 | 13 | 48 | 465 | 4 | 430 | 1.71e-69 | 237 |
| Msa0684920 | MtrunA17_Chr8g0342951 | 37.731 | 432 | 245 | 12 | 48 | 465 | 8 | 429 | 1.84e-69 | 237 |
| Msa0684920 | MtrunA17_Chr8g0343021 | 37.056 | 394 | 225 | 10 | 85 | 465 | 44 | 427 | 4.74e-69 | 236 |
| Msa0684920 | MtrunA17_Chr1g0191921 | 37.949 | 390 | 210 | 10 | 98 | 465 | 41 | 420 | 7.66e-68 | 233 |
| Msa0684920 | MtrunA17_Chr8g0343031 | 37.105 | 380 | 218 | 9 | 99 | 465 | 57 | 428 | 1.98e-67 | 231 |
| Msa0684920 | MtrunA17_Chr8g0342901 | 37.705 | 366 | 192 | 8 | 102 | 465 | 56 | 387 | 1.05e-64 | 224 |
| Msa0684920 | MtrunA17_Chr7g0272791 | 35.233 | 386 | 230 | 11 | 98 | 465 | 46 | 429 | 1.12e-62 | 218 |
| Msa0684920 | MtrunA17_Chr4g0047281 | 37.950 | 361 | 192 | 9 | 109 | 457 | 115 | 455 | 1.96e-61 | 215 |
| Msa0684920 | MtrunA17_Chr8g0342981 | 36.997 | 373 | 197 | 8 | 106 | 465 | 35 | 382 | 3.79e-61 | 214 |
| Msa0684920 | MtrunA17_Chr3g0120071 | 34.975 | 406 | 229 | 14 | 79 | 464 | 28 | 418 | 2.83e-60 | 212 |
| Msa0684920 | MtrunA17_Chr8g0338451 | 34.309 | 376 | 213 | 10 | 106 | 457 | 55 | 420 | 3.93e-54 | 194 |
| Msa0684920 | MtrunA17_Chr8g0342991 | 39.855 | 276 | 136 | 6 | 152 | 425 | 98 | 345 | 4.88e-51 | 185 |
| Msa0684920 | MtrunA17_Chr8g0343001 | 39.855 | 276 | 136 | 6 | 152 | 425 | 98 | 345 | 3.13e-50 | 183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684920 | AT3G45140.1 | 46.482 | 398 | 196 | 7 | 71 | 464 | 71 | 455 | 2.02e-119 | 371 |
| Msa0684920 | AT1G72520.1 | 45.293 | 393 | 202 | 7 | 74 | 457 | 91 | 479 | 2.07e-109 | 345 |
| Msa0684920 | AT3G45140.2 | 50.314 | 318 | 149 | 5 | 151 | 464 | 1 | 313 | 2.78e-105 | 330 |
| Msa0684920 | AT1G17420.1 | 44.853 | 408 | 204 | 8 | 63 | 457 | 74 | 473 | 3.51e-105 | 334 |
| Msa0684920 | AT1G67560.1 | 40.199 | 403 | 222 | 8 | 72 | 463 | 79 | 473 | 5.14e-90 | 294 |
| Msa0684920 | AT1G55020.1 | 39.221 | 385 | 211 | 9 | 98 | 465 | 43 | 421 | 2.40e-71 | 243 |
| Msa0684920 | AT3G22400.1 | 39.948 | 383 | 204 | 11 | 98 | 457 | 57 | 436 | 8.50e-70 | 239 |
Find 125 sgRNAs with CRISPR-Local
Find 471 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATCATCAAAACTCTTTA+AGG | 0.072888 | 4_4:+48537615 | None:intergenic |
| AAACTTGACCCTAAAATTTA+TGG | 0.171306 | 4_4:-48537746 | Msa0684920:CDS |
| CTCTTTCTGCAAGAGTTAAA+AGG | 0.191733 | 4_4:-48546757 | Msa0684920:five_prime_UTR |
| ACAACCTCCTTTGTTTCTTT+TGG | 0.222665 | 4_4:+48546582 | None:intergenic |
| GGATAATGATGAAACCTTAT+TGG | 0.262122 | 4_4:+48543130 | None:intergenic |
| ATGATGTAACTTTATAATTA+TGG | 0.268184 | 4_4:+48537538 | None:intergenic |
| ATAAAGCAAATTGTTCTTGA+TGG | 0.271031 | 4_4:-48543239 | Msa0684920:CDS |
| TTTGAAGTACCAGGAAGTTT+TGG | 0.287906 | 4_4:-48543311 | Msa0684920:CDS |
| TGGTTTAGGGATGAAGAATT+TGG | 0.299482 | 4_4:-48539945 | Msa0684920:CDS |
| TTCAGGAGCGCTATTTCTTC+AGG | 0.304177 | 4_4:+48537367 | None:intergenic |
| AGAAACAAAGGAGGTTGTTT+AGG | 0.305076 | 4_4:-48546577 | Msa0684920:CDS |
| AGGGAGAGAAGTTATGGTTA+TGG | 0.307083 | 4_4:+48546793 | None:intergenic |
| CTTAACCTTATCAATCCTTC+TGG | 0.318156 | 4_4:+48540846 | None:intergenic |
| GTTCTACAACGCCTAGGATA+TGG | 0.322916 | 4_4:+48540675 | None:intergenic |
| TTCAGGAGCAGCTTGACTTC+AGG | 0.329378 | 4_4:+48537384 | None:intergenic |
| TTCAGGAGCAAGTTGCCTTC+AGG | 0.340582 | 4_4:+48537452 | None:intergenic |
| TTCAGGAGCAAGTTGACTTC+AGG | 0.341249 | 4_4:+48537418 | None:intergenic |
| GGGAGAGAAGTTATGGTTAT+GGG | 0.342656 | 4_4:+48546794 | None:intergenic |
| GAACTTAAACGACCTGTTCT+TGG | 0.346682 | 4_4:-48540711 | Msa0684920:CDS |
| TTCATTGAAAAGGTCATCTA+TGG | 0.347003 | 4_4:+48540342 | None:intergenic |
| TTGTTCAAGATGAGACAATT+TGG | 0.358818 | 4_4:+48546677 | None:intergenic |
| GAGAAGAGGGAGAGAAGTTA+TGG | 0.360913 | 4_4:+48546787 | None:intergenic |
| TTAAGTTCGGGATCGCTGTC+TGG | 0.374623 | 4_4:+48540726 | None:intergenic |
| ATCCAACATGAAAACATGTT+TGG | 0.381038 | 4_4:+48546627 | None:intergenic |
| TTGTGGAAAATGAGCATAGA+AGG | 0.384517 | 4_4:-48543271 | Msa0684920:CDS |
| TGGCAGAGGACAGATTCTTT+TGG | 0.392055 | 4_4:-48539965 | Msa0684920:intron |
| TGATGACATAACAGATTTGT+TGG | 0.393027 | 4_4:-48546411 | Msa0684920:CDS |
| TATCCTAGGCGTTGTAGAAC+TGG | 0.394768 | 4_4:-48540672 | Msa0684920:CDS |
| TTATAAAGTTACATCATCAT+TGG | 0.397695 | 4_4:-48537532 | Msa0684920:three_prime_UTR |
| AAGAACAGGTCGTTTAAGTT+CGG | 0.403315 | 4_4:+48540713 | None:intergenic |
| CCAATATCTCCAAAACTTCC+TGG | 0.404847 | 4_4:+48543302 | None:intergenic |
| GTTCTTGATGGCTTTCTCAC+TGG | 0.412239 | 4_4:-48543227 | Msa0684920:CDS |
| ATCATCAGGGTTGTCATGCT+TGG | 0.413714 | 4_4:+48543169 | None:intergenic |
| CTGTGTTGCCAAGGTTGGTC+AGG | 0.418531 | 4_4:-48540276 | Msa0684920:CDS |
| GTTGGGTAAATCAATTCTCT+TGG | 0.421329 | 4_4:-48546393 | Msa0684920:CDS |
| GGAAGACCTCGTTGCGATAC+AGG | 0.429976 | 4_4:-48540651 | Msa0684920:intron |
| AAAATGACCCTCTTATCATC+AGG | 0.437774 | 4_4:+48543155 | None:intergenic |
| TAATCCTTGTTGCATCCAAT+TGG | 0.438384 | 4_4:-48539901 | Msa0684920:CDS |
| GATGACATAACAGATTTGTT+GGG | 0.448090 | 4_4:-48546410 | Msa0684920:CDS |
| AAGCCATGTCTCCATGGTAT+TGG | 0.449477 | 4_4:-48546656 | Msa0684920:CDS |
| TGTTCTTTGCCACCAAGAAC+AGG | 0.450316 | 4_4:+48540699 | None:intergenic |
| AGAACAGGTCGTTTAAGTTC+GGG | 0.451858 | 4_4:+48540714 | None:intergenic |
| AAAGAGAAGTTATGAGAAGA+GGG | 0.451983 | 4_4:+48546774 | None:intergenic |
| GCTGTAGTGGACAAGAATCT+TGG | 0.452160 | 4_4:-48540382 | Msa0684920:CDS |
| TCTTTCTGCAAGAGTTAAAA+GGG | 0.455179 | 4_4:-48546756 | Msa0684920:five_prime_UTR |
| AGTTAAATCCTTCATTGAAA+AGG | 0.459003 | 4_4:+48540332 | None:intergenic |
| TTCAGCAAATACCTTACAAT+CGG | 0.459678 | 4_4:-48540437 | Msa0684920:CDS |
| AGTAGTATACCGTGACCAAT+TGG | 0.462083 | 4_4:+48539886 | None:intergenic |
| GTGGTTATTGCTGATTCAGC+AGG | 0.464570 | 4_4:+48537722 | None:intergenic |
| GAAAGAGAAGTTATGAGAAG+AGG | 0.473228 | 4_4:+48546773 | None:intergenic |
| AACAAAGGAGGTTGTTTAGG+AGG | 0.475654 | 4_4:-48546574 | Msa0684920:CDS |
| TAATATTTGTTCAAGTGTAC+AGG | 0.476744 | 4_4:-48537562 | Msa0684920:three_prime_UTR |
| TTGCCTCCGCAAGCTGAGAA+AGG | 0.479865 | 4_4:-48540310 | Msa0684920:CDS |
| TGCGTCTGTGTTGCCAAGGT+TGG | 0.481745 | 4_4:-48540281 | Msa0684920:CDS |
| TGCCTCCGCAAGCTGAGAAA+GGG | 0.489278 | 4_4:-48540309 | Msa0684920:CDS |
| CTTCCACTGATCTATGCGTC+TGG | 0.491600 | 4_4:+48543354 | None:intergenic |
| GTTAGCTCCGAGCTAGATCC+CGG | 0.491907 | 4_4:-48546365 | Msa0684920:intron |
| TGCGTGGAAAGCCGATTGTA+AGG | 0.492059 | 4_4:+48540426 | None:intergenic |
| ATGACAACCCTGATGATAAG+AGG | 0.495085 | 4_4:-48543163 | Msa0684920:CDS |
| GAGACAAAATTGGAGAAGGA+AGG | 0.497417 | 4_4:-48543395 | Msa0684920:CDS |
| ATTGATAAGGTTAAGAGAAG+AGG | 0.497584 | 4_4:-48540838 | Msa0684920:CDS |
| TCTGAGAAGGATTCGTCCCT+CGG | 0.504722 | 4_4:+48540478 | None:intergenic |
| AATGAGCAAATAAAGAGCTA+TGG | 0.516557 | 4_4:-48537504 | Msa0684920:three_prime_UTR |
| TTCTTGCGTCTGTGTTGCCA+AGG | 0.521427 | 4_4:-48540285 | Msa0684920:CDS |
| ACTGTTCAACCAACAGTTGG+AGG | 0.522239 | 4_4:-48546467 | Msa0684920:CDS |
| TTTGGAAGACAGACTATAGC+AGG | 0.522688 | 4_4:-48539927 | Msa0684920:CDS |
| ATCTTACTGTCCATTGTGGC+GGG | 0.524956 | 4_4:+48540211 | None:intergenic |
| GCAAAGAACATCCATATCCT+AGG | 0.527336 | 4_4:-48540686 | Msa0684920:CDS |
| GAGAAAAGCCCTCCAACTGT+TGG | 0.528736 | 4_4:+48546458 | None:intergenic |
| TCAGAAATGGCTATAGAAAG+AGG | 0.531378 | 4_4:-48546437 | Msa0684920:CDS |
| CTTAAACGACCTGTTCTTGG+TGG | 0.533575 | 4_4:-48540708 | Msa0684920:CDS |
| TTGACAAGCCTGACCAACCT+TGG | 0.535049 | 4_4:+48540268 | None:intergenic |
| AATCCTTCTGGTGTTTCAGA+TGG | 0.536422 | 4_4:+48540858 | None:intergenic |
| TCATCTATGGCTGAGAAAAG+AGG | 0.540800 | 4_4:+48540355 | None:intergenic |
| AAACACCAGAAGGATTGATA+AGG | 0.546240 | 4_4:-48540851 | Msa0684920:CDS |
| GAGAAGTTATGGTTATGGGA+TGG | 0.550391 | 4_4:+48546798 | None:intergenic |
| TTTGGTTACTTCCAATACCA+TGG | 0.556225 | 4_4:+48546645 | None:intergenic |
| CATCTATGGCTGAGAAAAGA+GGG | 0.557786 | 4_4:+48540356 | None:intergenic |
| AGAAACCCTTTCTCAGCTTG+CGG | 0.559756 | 4_4:+48540304 | None:intergenic |
| TTGGAGAAGGAAGGAATCAA+AGG | 0.560037 | 4_4:-48543386 | Msa0684920:CDS |
| CTTCCAATACCATGGAGACA+TGG | 0.561407 | 4_4:+48546653 | None:intergenic |
| AGATATTGGTGCAGTTCTTG+TGG | 0.562515 | 4_4:-48543288 | Msa0684920:CDS |
| AAAAGAGACAAAATTGGAGA+AGG | 0.563624 | 4_4:-48543399 | Msa0684920:intron |
| CTGAAAACTTTACGAGGCAA+TGG | 0.564230 | 4_4:-48540813 | Msa0684920:CDS |
| GAGTTGCTTTAATTCTGAGA+AGG | 0.565436 | 4_4:+48540465 | None:intergenic |
| AACCCTTTCTCAGCTTGCGG+AGG | 0.566717 | 4_4:+48540307 | None:intergenic |
| TGACTTACCGGGATCTAGCT+CGG | 0.577812 | 4_4:+48546358 | None:intergenic |
| CAGAAATGGCTATAGAAAGA+GGG | 0.580132 | 4_4:-48546436 | Msa0684920:CDS |
| TTGTTGCTCAATCATTTCAG+TGG | 0.580753 | 4_4:+48537703 | None:intergenic |
| CTGTTCAACCAACAGTTGGA+GGG | 0.583789 | 4_4:-48546466 | Msa0684920:CDS |
| TGAAGCTTGGACGCTCCTGA+AGG | 0.584304 | 4_4:-48537467 | Msa0684920:three_prime_UTR |
| TTGAACAAGCCATGTCTCCA+TGG | 0.586444 | 4_4:-48546662 | Msa0684920:CDS |
| GTTACTGTTCAACCAACAGT+TGG | 0.586551 | 4_4:-48546470 | Msa0684920:CDS |
| TATCTTACTGTCCATTGTGG+CGG | 0.591570 | 4_4:+48540210 | None:intergenic |
| GAACGTACATTGTTTACAGT+CGG | 0.593956 | 4_4:+48546820 | None:intergenic |
| GGTTGTGAAAACAGCTGTAG+TGG | 0.595530 | 4_4:-48540395 | Msa0684920:CDS |
| GTTGGTCAGGCTTGTCAATG+AGG | 0.596030 | 4_4:-48540263 | Msa0684920:CDS |
| CCACTGATCTATGCGTCTGG+TGG | 0.602891 | 4_4:+48543357 | None:intergenic |
| AAATGACCCTCTTATCATCA+GGG | 0.603935 | 4_4:+48543156 | None:intergenic |
| AAATATCTTACTGTCCATTG+TGG | 0.606843 | 4_4:+48540207 | None:intergenic |
| TCAGGCTTGTCAATGAGGCT+AGG | 0.608501 | 4_4:-48540258 | Msa0684920:CDS |
| TGTGGAAAATGAGCATAGAA+GGG | 0.608699 | 4_4:-48543270 | Msa0684920:CDS |
| TCACAACCGGTAAAAGTGCG+TGG | 0.609810 | 4_4:+48540410 | None:intergenic |
| AGGACATGCTACAGTTGAAG+AGG | 0.610205 | 4_4:-48537675 | Msa0684920:CDS |
| GAAGCTGAATTTGAAGTACC+AGG | 0.611074 | 4_4:-48543320 | Msa0684920:CDS |
| CTTCCAGTTCTACAACGCCT+AGG | 0.613399 | 4_4:+48540669 | None:intergenic |
| TTGTTGCATCCAATTGGTCA+CGG | 0.613442 | 4_4:-48539895 | Msa0684920:intron |
| TTGTGGCGGGAGTCTCGAAA+CGG | 0.619459 | 4_4:+48540224 | None:intergenic |
| ACTTTACGAGGCAATGGACA+AGG | 0.619463 | 4_4:-48540807 | Msa0684920:CDS |
| ATGATTGAGCAACAAATCAG+AGG | 0.621173 | 4_4:-48537695 | Msa0684920:CDS |
| TGACAACCCTGATGATAAGA+GGG | 0.622995 | 4_4:-48543162 | Msa0684920:CDS |
| TTTCGAGACTCCCGCCACAA+TGG | 0.628813 | 4_4:-48540221 | Msa0684920:CDS |
| TCATAAACCAAAAGAAACAA+AGG | 0.629237 | 4_4:-48546589 | Msa0684920:CDS |
| TACGATGTGTATAATGACCT+CGG | 0.643812 | 4_4:-48540753 | Msa0684920:CDS |
| GTAACAATGTCTATGTTCCG+AGG | 0.644422 | 4_4:-48540495 | Msa0684920:CDS |
| CCACCAGACGCATAGATCAG+TGG | 0.649521 | 4_4:-48543357 | Msa0684920:CDS |
| GTGACCAATTGGATGCAACA+AGG | 0.655202 | 4_4:+48539897 | None:intergenic |
| TAACAATGTCTATGTTCCGA+GGG | 0.658588 | 4_4:-48540494 | Msa0684920:CDS |
| TTACCATCTGAAACACCAGA+AGG | 0.662031 | 4_4:-48540861 | Msa0684920:CDS |
| TAAACCAAAAGAAACAAAGG+AGG | 0.689233 | 4_4:-48546586 | Msa0684920:CDS |
| GGCCTACCTGTATCGCAACG+AGG | 0.706133 | 4_4:+48540645 | None:intergenic |
| GTGCAGCAAAATCAAAGCTG+TGG | 0.713390 | 4_4:-48546546 | Msa0684920:CDS |
| GAGGAACTGAAAACTTTACG+AGG | 0.731350 | 4_4:-48540819 | Msa0684920:CDS |
| TGTTGGTTGAACAGTAACTG+TGG | 0.746011 | 4_4:+48546475 | None:intergenic |
| GATCGCTGTCTGGATCACCG+AGG | 0.820366 | 4_4:+48540736 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATAATTTAAATAAA+GGG | + | chr4_4:48539004-48539023 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATTA+TGG | + | chr4_4:48541099-48541118 | None:intergenic | 0.0% |
| !! | AAATAAAAAAAATAAAAAAA+AGG | + | chr4_4:48544349-48544368 | None:intergenic | 0.0% |
| !!! | TTTAAATTTTTAAATATTAA+TGG | - | chr4_4:48544476-48544495 | Msa0684920:intron | 0.0% |
| !! | ATAATAATAAATTTAATTAA+AGG | + | chr4_4:48546207-48546226 | None:intergenic | 0.0% |
| !! | AAAATTAAAATTAAAAATTA+AGG | - | chr4_4:48546262-48546281 | Msa0684920:intron | 0.0% |
| !! | AAATTAAAATTAAAAATTAA+GGG | - | chr4_4:48546263-48546282 | Msa0684920:intron | 0.0% |
| !!! | CATGTTTTTAAAAAAAATTA+GGG | - | chr4_4:48538419-48538438 | Msa0684920:intron | 10.0% |
| !! | TAAATTATTAATTAGAAAGA+TGG | + | chr4_4:48538916-48538935 | None:intergenic | 10.0% |
| !! | TAATTAAATCTCATTAAAAT+AGG | - | chr4_4:48539195-48539214 | Msa0684920:intron | 10.0% |
| !! | AATATTATTTAATTGTTGTA+TGG | + | chr4_4:48539226-48539245 | None:intergenic | 10.0% |
| !!! | AAAAAATGATCAAATATTTT+TGG | + | chr4_4:48539287-48539306 | None:intergenic | 10.0% |
| !!! | AATATTTGATCATTTTTTTA+AGG | - | chr4_4:48539289-48539308 | Msa0684920:intron | 10.0% |
| !!! | ATCAATTTTAATATATACAA+TGG | + | chr4_4:48539356-48539375 | None:intergenic | 10.0% |
| !! | ATATAGAAAAAAATTGTTTA+AGG | - | chr4_4:48539803-48539822 | Msa0684920:intron | 10.0% |
| !! | TATAGAAAAAAATTGTTTAA+GGG | - | chr4_4:48539804-48539823 | Msa0684920:intron | 10.0% |
| !!! | CAATTAATTTTATTTTTGTT+TGG | + | chr4_4:48540716-48540735 | None:intergenic | 10.0% |
| !! | AAATATTGTCATAAAATTAT+TGG | - | chr4_4:48542298-48542317 | Msa0684920:intron | 10.0% |
| !! | AATATTGTCATAAAATTATT+GGG | - | chr4_4:48542299-48542318 | Msa0684920:intron | 10.0% |
| !!! | TAATTGTATAATAATTTTAG+GGG | + | chr4_4:48542547-48542566 | None:intergenic | 10.0% |
| !!! | GATAATTGTATAATAATTTT+AGG | + | chr4_4:48542549-48542568 | None:intergenic | 10.0% |
| !!! | TAAAATATACTTTTACAAAT+TGG | - | chr4_4:48542577-48542596 | Msa0684920:intron | 10.0% |
| !!! | ATTAATTTTACTAAGAAATA+GGG | + | chr4_4:48543149-48543168 | None:intergenic | 10.0% |
| !!! | TATTAATTTTACTAAGAAAT+AGG | + | chr4_4:48543150-48543169 | None:intergenic | 10.0% |
| !!! | TAATATTTTCTTTTTAACAA+AGG | - | chr4_4:48544051-48544070 | Msa0684920:intron | 10.0% |
| !!! | ATTTGTTTTTAATTTAATTC+TGG | - | chr4_4:48544964-48544983 | Msa0684920:intron | 10.0% |
| !!! | TTTGTTTTTAATTTAATTCT+GGG | - | chr4_4:48544965-48544984 | Msa0684920:intron | 10.0% |
| !!! | TTTTTTATCTTTAAAATATG+TGG | - | chr4_4:48545133-48545152 | Msa0684920:intron | 10.0% |
| !! | AAAAAAATAATGTTAAAGAT+TGG | + | chr4_4:48545355-48545374 | None:intergenic | 10.0% |
| !! | AAAATAATAATGTTAAAGAT+TGG | + | chr4_4:48545552-48545571 | None:intergenic | 10.0% |
| !!! | CCTAATTTTTTTTAAAAACA+TGG | + | chr4_4:48538421-48538440 | None:intergenic | 15.0% |
| !!! | CCATGTTTTTAAAAAAAATT+AGG | - | chr4_4:48538418-48538437 | Msa0684920:intron | 15.0% |
| !!! | TATAGAAAAACTTTTTTTTC+AGG | + | chr4_4:48538807-48538826 | None:intergenic | 15.0% |
| !! | TATGTATCATATTTATATAC+AGG | + | chr4_4:48538947-48538966 | None:intergenic | 15.0% |
| !! | GTTTAAATAAAGGATAAAAA+TGG | + | chr4_4:48539130-48539149 | None:intergenic | 15.0% |
| !!! | AATATTTTTGGCAAATAATA+AGG | + | chr4_4:48539275-48539294 | None:intergenic | 15.0% |
| !! | TTCATTAGCAATATTATAAA+AGG | - | chr4_4:48539453-48539472 | Msa0684920:intron | 15.0% |
| !! | CAATATTATCTATACTATAT+GGG | + | chr4_4:48539876-48539895 | None:intergenic | 15.0% |
| !! | ACAATATTATCTATACTATA+TGG | + | chr4_4:48539877-48539896 | None:intergenic | 15.0% |
| !! | ACAAAATAAAAGATTATGAA+AGG | + | chr4_4:48540477-48540496 | None:intergenic | 15.0% |
| !!! | TTTTATTTTGTGTTTTGATT+TGG | - | chr4_4:48540486-48540505 | Msa0684920:CDS | 15.0% |
| !!! | ATTAATTGACCTTTTTTTTT+AGG | - | chr4_4:48540728-48540747 | Msa0684920:CDS | 15.0% |
| !!! | TTAATTGACCTTTTTTTTTA+GGG | - | chr4_4:48540729-48540748 | Msa0684920:CDS | 15.0% |
| !! | AATTAATTCCCTAAAAAAAA+AGG | + | chr4_4:48540740-48540759 | None:intergenic | 15.0% |
| !! | TAACTAGTATAAATTGAATT+CGG | + | chr4_4:48541277-48541296 | None:intergenic | 15.0% |
| !! | CAATTTATACTAGTTAAAAA+AGG | - | chr4_4:48541281-48541300 | Msa0684920:intron | 15.0% |
| !! | TTTGATCAAATTATTCAAAT+TGG | - | chr4_4:48541378-48541397 | Msa0684920:intron | 15.0% |
| !!! | TTGTGACATTTAATTTATTT+TGG | - | chr4_4:48541743-48541762 | Msa0684920:intron | 15.0% |
| !!! | TGTGACATTTAATTTATTTT+GGG | - | chr4_4:48541744-48541763 | Msa0684920:intron | 15.0% |
| !! | GTAGTAAAATTTAGTATAAT+TGG | - | chr4_4:48541970-48541989 | Msa0684920:intron | 15.0% |
| !!! | AAAAAAAAACAAATTTTGAC+AGG | + | chr4_4:48542104-48542123 | None:intergenic | 15.0% |
| !!! | ATTTTATGACAATATTTTAG+AGG | + | chr4_4:48542295-48542314 | None:intergenic | 15.0% |
| !! | ATATTGTCATAAAATTATTG+GGG | - | chr4_4:48542300-48542319 | Msa0684920:intron | 15.0% |
| !! | ATTTATTCATTAACAAAATG+TGG | - | chr4_4:48542933-48542952 | Msa0684920:intron | 15.0% |
| !!! | TTAATTTTACTAAGAAATAG+GGG | + | chr4_4:48543148-48543167 | None:intergenic | 15.0% |
| !!! | CATTTAACATGTAAATTTTT+TGG | + | chr4_4:48543211-48543230 | None:intergenic | 15.0% |
| !! | TTGGAATTAATAATTTAACT+CGG | - | chr4_4:48543647-48543666 | Msa0684920:intron | 15.0% |
| !! | TGTATATGAAATTAATGATA+GGG | + | chr4_4:48544084-48544103 | None:intergenic | 15.0% |
| !! | TTGTATATGAAATTAATGAT+AGG | + | chr4_4:48544085-48544104 | None:intergenic | 15.0% |
| !! | AAATAAAAAAAAGGTAACAT+AGG | + | chr4_4:48544340-48544359 | None:intergenic | 15.0% |
| !!! | AAATCCTCTAAAAAAATATT+AGG | + | chr4_4:48545327-48545346 | None:intergenic | 15.0% |
| !! | CAAAAAATAATGTTAAAGAT+TGG | + | chr4_4:48545488-48545507 | None:intergenic | 15.0% |
| !! | CAATAAATAATGTTAAAGAT+TGG | + | chr4_4:48545618-48545637 | None:intergenic | 15.0% |
| !!! | TTAAAAATTAAGGGTATTTT+TGG | - | chr4_4:48546272-48546291 | Msa0684920:intron | 15.0% |
| !! | AGTATACTTTCAAATAAAAT+TGG | + | chr4_4:48546364-48546383 | None:intergenic | 15.0% |
| !! | AGGTATTAAAAATTGTAAAT+TGG | - | chr4_4:48546607-48546626 | Msa0684920:CDS | 15.0% |
| !! | ATGATGTAACTTTATAATTA+TGG | + | chr4_4:48546663-48546682 | None:intergenic | 15.0% |
| !!! | TTTTTTTACCTAAAGCAATA+AGG | - | chr4_4:48537989-48538008 | Msa0684920:intron | 20.0% |
| !! | TTGAAGAAAACTACATTTAA+GGG | + | chr4_4:48538530-48538549 | None:intergenic | 20.0% |
| !! | TTTGAAGAAAACTACATTTA+AGG | + | chr4_4:48538531-48538550 | None:intergenic | 20.0% |
| !! | TATAGAAAGAGATATCAATT+TGG | - | chr4_4:48538722-48538741 | Msa0684920:intron | 20.0% |
| !! | ATCATATTTATATACAGGTA+TGG | + | chr4_4:48538942-48538961 | None:intergenic | 20.0% |
| !! | ATAAAGAGGATATATCAATT+TGG | + | chr4_4:48539544-48539563 | None:intergenic | 20.0% |
| !! | TAACGCGTATAAATTATTAA+CGG | - | chr4_4:48539627-48539646 | Msa0684920:intron | 20.0% |
| !!! | AAGATAAACATAGTCTTTTT+GGG | + | chr4_4:48539714-48539733 | None:intergenic | 20.0% |
| !!! | AAAGATAAACATAGTCTTTT+TGG | + | chr4_4:48539715-48539734 | None:intergenic | 20.0% |
| !! | ATTACTAACATTATCAACAT+TGG | - | chr4_4:48540028-48540047 | Msa0684920:intron | 20.0% |
| !! | CAAAATAAGTTCAATTCAAA+CGG | - | chr4_4:48540391-48540410 | Msa0684920:CDS | 20.0% |
| !! | AAAATAAGTTCAATTCAAAC+GGG | - | chr4_4:48540392-48540411 | Msa0684920:CDS | 20.0% |
| !! | TGTTAGATTATAATTATTCG+TGG | - | chr4_4:48540534-48540553 | Msa0684920:intron | 20.0% |
| !! | TATATATATATTATGGAGCT+GGG | + | chr4_4:48541092-48541111 | None:intergenic | 20.0% |
| !! | ATATATATATATTATGGAGC+TGG | + | chr4_4:48541093-48541112 | None:intergenic | 20.0% |
| !!! | ATTTGATTTTCTATTCTCAA+AGG | - | chr4_4:48541519-48541538 | Msa0684920:intron | 20.0% |
| !! | TTAAGAGACTTAAAAAAGTA+GGG | + | chr4_4:48541605-48541624 | None:intergenic | 20.0% |
| !! | ATTAAGAGACTTAAAAAAGT+AGG | + | chr4_4:48541606-48541625 | None:intergenic | 20.0% |
| !!! | TTCTTTATGAGCATTTTATT+TGG | - | chr4_4:48541692-48541711 | Msa0684920:intron | 20.0% |
| !!! | GTGACATTTAATTTATTTTG+GGG | - | chr4_4:48541745-48541764 | Msa0684920:intron | 20.0% |
| !!! | TGAATCATTGGTTATTTTAT+GGG | - | chr4_4:48541856-48541875 | Msa0684920:intron | 20.0% |
| !!! | GCAAATTTTCTAAAAAGAAA+TGG | + | chr4_4:48541920-48541939 | None:intergenic | 20.0% |
| !! | ATGTCATGTACTTATTTAAT+TGG | - | chr4_4:48543049-48543068 | Msa0684920:intron | 20.0% |
| !!! | TAATTTTACTAAGAAATAGG+GGG | + | chr4_4:48543147-48543166 | None:intergenic | 20.0% |
| !! | GTATATGAAATTAATGATAG+GGG | + | chr4_4:48544083-48544102 | None:intergenic | 20.0% |
| !! | TATTTGAATTTACTCATCAA+TGG | - | chr4_4:48544195-48544214 | Msa0684920:intron | 20.0% |
| !! | ATTTGAATTTACTCATCAAT+GGG | - | chr4_4:48544196-48544215 | Msa0684920:intron | 20.0% |
| !! | TTCTAAACAAAATAATGTCA+AGG | - | chr4_4:48544518-48544537 | Msa0684920:intron | 20.0% |
| !! | ACATAAATGTATAAATGACA+TGG | - | chr4_4:48544651-48544670 | Msa0684920:intron | 20.0% |
| !!! | TTTATCTTTAAAATATGTGG+TGG | - | chr4_4:48545136-48545155 | Msa0684920:intron | 20.0% |
| !!! | TTATCTTTAAAATATGTGGT+GGG | - | chr4_4:48545137-48545156 | Msa0684920:intron | 20.0% |
| !!! | TTACTAATCCTTTTTTTTAG+AGG | - | chr4_4:48545385-48545404 | Msa0684920:intron | 20.0% |
| !!! | CTTTAAATCCTCTAAAAAAA+AGG | + | chr4_4:48545331-48545350 | None:intergenic | 20.0% |
| !!! | TGTTACTAATCTTTTTTTAG+AGG | - | chr4_4:48545583-48545602 | Msa0684920:intron | 20.0% |
| !!! | GTTACTAATCTTATTTTTAG+AGG | - | chr4_4:48545647-48545666 | Msa0684920:intron | 20.0% |
| !!! | TGTTACTAATCTTTTTTTAG+AGG | - | chr4_4:48545583-48545602 | Msa0684920:intron | 20.0% |
| !!! | TGTTACTAATCTTTTTTTAG+AGG | - | chr4_4:48545583-48545602 | Msa0684920:intron | 20.0% |
| !! | CAAAAAATAATGGTAAAGAT+TGG | + | chr4_4:48545808-48545827 | None:intergenic | 20.0% |
| !! | GTGGAAGTAATAAAATAATA+TGG | - | chr4_4:48545906-48545925 | Msa0684920:intron | 20.0% |
| !! | AACAATAAGAACAATTCATA+AGG | - | chr4_4:48546162-48546181 | Msa0684920:intron | 20.0% |
| !! | TTATAAAGTTACATCATCAT+TGG | - | chr4_4:48546666-48546685 | Msa0684920:CDS | 20.0% |
| !!! | TTCTTTTGGTTTATGAACAA+AGG | + | chr4_4:48537605-48537624 | None:intergenic | 25.0% |
| ! | TCATAAACCAAAAGAAACAA+AGG | - | chr4_4:48537609-48537628 | Msa0684920:exon | 25.0% |
| !!! | TTAACTTTGGAATTTAGGTT+GGG | - | chr4_4:48537866-48537885 | Msa0684920:intron | 25.0% |
| ! | AAATAAGCACAGTAGAAAAA+CGG | + | chr4_4:48538699-48538718 | None:intergenic | 25.0% |
| ! | AGTGTTATATAGTGTTCTTA+TGG | - | chr4_4:48538826-48538845 | Msa0684920:intron | 25.0% |
| ! | TGGTTAAATCTCACTAAAAT+AGG | + | chr4_4:48538896-48538915 | None:intergenic | 25.0% |
| !! | AAATATGATACATAGCTTTG+TGG | - | chr4_4:48538953-48538972 | Msa0684920:intron | 25.0% |
| ! | TAATCAGCAATCTACATAAA+TGG | - | chr4_4:48539383-48539402 | Msa0684920:intron | 25.0% |
| ! | TAGGTAGTAGTAATATAAAG+AGG | + | chr4_4:48539558-48539577 | None:intergenic | 25.0% |
| ! | TTACTACTACCTAAAAAAAG+AGG | - | chr4_4:48539565-48539584 | Msa0684920:intron | 25.0% |
| ! | ATTATCTATACTATATGGGA+AGG | + | chr4_4:48539872-48539891 | None:intergenic | 25.0% |
| !! | AACATTATCAACATTGGTTA+CGG | - | chr4_4:48540034-48540053 | Msa0684920:intron | 25.0% |
| !! | TCATTTTACGTTCTAATAAG+AGG | + | chr4_4:48540079-48540098 | None:intergenic | 25.0% |
| ! | AAATAAGTTCAATTCAAACG+GGG | - | chr4_4:48540393-48540412 | Msa0684920:CDS | 25.0% |
| !!! | ACGTCAATTTTAGCATATAT+TGG | + | chr4_4:48540683-48540702 | None:intergenic | 25.0% |
| ! | GGGAAAAATACAAGTAATTA+AGG | + | chr4_4:48540765-48540784 | None:intergenic | 25.0% |
| !!! | TTGTATTTTTCCCTTGTTTT+TGG | - | chr4_4:48540772-48540791 | Msa0684920:CDS | 25.0% |
| !! | TCTTTTTGAACCAAAAACAA+GGG | + | chr4_4:48540785-48540804 | None:intergenic | 25.0% |
| ! | ATAAAGCAAATTGTTCTTGA+TGG | - | chr4_4:48540959-48540978 | Msa0684920:intron | 25.0% |
| !! | TCAATTTTTCTTGTGAATCA+TGG | - | chr4_4:48540999-48541018 | Msa0684920:intron | 25.0% |
| !! | CAATTTTTCTTGTGAATCAT+GGG | - | chr4_4:48541000-48541019 | Msa0684920:intron | 25.0% |
| ! | GTTATTGTTTGTCTAAACAT+AGG | - | chr4_4:48541485-48541504 | Msa0684920:intron | 25.0% |
| ! | TGTATGGCTATCAATTTATA+CGG | + | chr4_4:48541827-48541846 | None:intergenic | 25.0% |
| ! | TGATTCACAAAAAAACTGTA+TGG | + | chr4_4:48541843-48541862 | None:intergenic | 25.0% |
| !!! | ACAGTTTTTTTGTGAATCAT+TGG | - | chr4_4:48541844-48541863 | Msa0684920:intron | 25.0% |
| !!! | GTGAATCATTGGTTATTTTA+TGG | - | chr4_4:48541855-48541874 | Msa0684920:intron | 25.0% |
| !!! | TTGGTTATTTTATGGGTTTT+TGG | - | chr4_4:48541863-48541882 | Msa0684920:intron | 25.0% |
| !!! | TTTTTTTTTAAGGAAAGCCT+AGG | - | chr4_4:48542122-48542141 | Msa0684920:intron | 25.0% |
| ! | TTTACAAATTGGAAAACTTG+AGG | - | chr4_4:48542588-48542607 | Msa0684920:intron | 25.0% |
| ! | TGTTAATCTTTCAATTCTCT+AGG | + | chr4_4:48542664-48542683 | None:intergenic | 25.0% |
| ! | AAAAAAAACTTGAGTGTGTT+TGG | - | chr4_4:48542699-48542718 | Msa0684920:intron | 25.0% |
| ! | AATAAGTACATGACATTGAT+AGG | + | chr4_4:48543045-48543064 | None:intergenic | 25.0% |
| !!! | CACGTACAATTTTAATTATG+AGG | - | chr4_4:48543241-48543260 | Msa0684920:CDS | 25.0% |
| ! | TCGTTAAAAGAAAATTGTGT+TGG | - | chr4_4:48543628-48543647 | Msa0684920:intron | 25.0% |
| ! | AGTTAAATCCTTCATTGAAA+AGG | + | chr4_4:48543869-48543888 | None:intergenic | 25.0% |
| ! | TATTTATACTAGCAGAAAGA+CGG | - | chr4_4:48544364-48544383 | Msa0684920:intron | 25.0% |
| ! | ATTAAAGAAGGGAAAATAGA+AGG | + | chr4_4:48544749-48544768 | None:intergenic | 25.0% |
| ! | CAAAAGTTCTCATTAAAGAA+GGG | + | chr4_4:48544760-48544779 | None:intergenic | 25.0% |
| ! | ACAAAAGTTCTCATTAAAGA+AGG | + | chr4_4:48544761-48544780 | None:intergenic | 25.0% |
| !!! | TTATATGTAGCTTTATCAAG+AGG | + | chr4_4:48544800-48544819 | None:intergenic | 25.0% |
| ! | TTACCATAAATAAGTCACAA+GGG | + | chr4_4:48544880-48544899 | None:intergenic | 25.0% |
| ! | ATTACCATAAATAAGTCACA+AGG | + | chr4_4:48544881-48544900 | None:intergenic | 25.0% |
| !! | TGTTTTCAATTAAGCACAAA+GGG | - | chr4_4:48544926-48544945 | Msa0684920:intron | 25.0% |
| ! | TTAAAAACAAATGTGAGTTC+AGG | + | chr4_4:48544956-48544975 | None:intergenic | 25.0% |
| !! | TCTTTAAGAATATGTTGGAT+GGG | + | chr4_4:48545034-48545053 | None:intergenic | 25.0% |
| !! | TTCTTTAAGAATATGTTGGA+TGG | + | chr4_4:48545035-48545054 | None:intergenic | 25.0% |
| !! | TGGTTTCTTTAAGAATATGT+TGG | + | chr4_4:48545039-48545058 | None:intergenic | 25.0% |
| !!! | TAATTTGTTGTCATTTGACA+AGG | + | chr4_4:48545227-48545246 | None:intergenic | 25.0% |
| !! | TTAATTATCAATTAGCTTCC+AGG | + | chr4_4:48545259-48545278 | None:intergenic | 25.0% |
| !!! | GAGTCCTAATATTTTTTTAG+AGG | - | chr4_4:48545320-48545339 | Msa0684920:intron | 25.0% |
| !!! | TATGGAAATACTGTTTTTTG+TGG | - | chr4_4:48545887-48545906 | Msa0684920:intron | 25.0% |
| !!! | TATGGAAATACTGTTTTTTG+TGG | - | chr4_4:48545887-48545906 | Msa0684920:intron | 25.0% |
| ! | ACAGATGTACAACATAAAAT+CGG | - | chr4_4:48546000-48546019 | Msa0684920:intron | 25.0% |
| !!! | TGAGTTTGATTTGTGATTAA+CGG | - | chr4_4:48546068-48546087 | Msa0684920:intron | 25.0% |
| !!! | TCCACGTGTTATTTTATAAT+TGG | - | chr4_4:48546137-48546156 | Msa0684920:intron | 25.0% |
| ! | ATAAAGAAAACTACCTCTTT+CGG | + | chr4_4:48546324-48546343 | None:intergenic | 25.0% |
| ! | AAACTTGACCCTAAAATTTA+TGG | - | chr4_4:48546452-48546471 | Msa0684920:CDS | 25.0% |
| ! | GTTATCATCAAAACTCTTTA+AGG | + | chr4_4:48546586-48546605 | None:intergenic | 25.0% |
| !!! | AAAGAGTTTTGATGATAACA+AGG | - | chr4_4:48546587-48546606 | Msa0684920:CDS | 25.0% |
| ! | TAATATTTGTTCAAGTGTAC+AGG | - | chr4_4:48546636-48546655 | Msa0684920:CDS | 25.0% |
| !! | AACAACAAAAATTTGAAGCT+TGG | - | chr4_4:48546718-48546737 | Msa0684920:exon | 25.0% |
| AAAGAGAAGTTATGAGAAGA+GGG | + | chr4_4:48537427-48537446 | None:intergenic | 30.0% | |
| TCTTTCTGCAAGAGTTAAAA+GGG | - | chr4_4:48537442-48537461 | Msa0684920:three_prime_UTR | 30.0% | |
| TTGTTCAAGATGAGACAATT+TGG | + | chr4_4:48537524-48537543 | None:intergenic | 30.0% | |
| ! | AACCAAACATGTTTTCATGT+TGG | - | chr4_4:48537569-48537588 | Msa0684920:three_prime_UTR | 30.0% |
| ATCCAACATGAAAACATGTT+TGG | + | chr4_4:48537574-48537593 | None:intergenic | 30.0% | |
| TAAACCAAAAGAAACAAAGG+AGG | - | chr4_4:48537612-48537631 | Msa0684920:exon | 30.0% | |
| TGATGACATAACAGATTTGT+TGG | - | chr4_4:48537787-48537806 | Msa0684920:intron | 30.0% | |
| ! | GATGACATAACAGATTTGTT+GGG | - | chr4_4:48537788-48537807 | Msa0684920:intron | 30.0% |
| !! | CACTCTTAACTTTGGAATTT+AGG | - | chr4_4:48537861-48537880 | Msa0684920:intron | 30.0% |
| !! | CTTAACTTTGGAATTTAGGT+TGG | - | chr4_4:48537865-48537884 | Msa0684920:intron | 30.0% |
| !!! | CATTTTCAGCTGTTTTTAAC+TGG | + | chr4_4:48538464-48538483 | None:intergenic | 30.0% |
| CTATATAATCAGTGAGTGTT+TGG | + | chr4_4:48538596-48538615 | None:intergenic | 30.0% | |
| ! | ACACTCACTGATTATATAGT+TGG | - | chr4_4:48538597-48538616 | Msa0684920:intron | 30.0% |
| ATATAGTGTTCTTATGGTAG+TGG | - | chr4_4:48538832-48538851 | Msa0684920:intron | 30.0% | |
| TTGTTCCTATAGTGTTCTTA+TGG | - | chr4_4:48538857-48538876 | Msa0684920:intron | 30.0% | |
| !! | AAATGTGACACATAGTTTTG+TGG | - | chr4_4:48539091-48539110 | Msa0684920:intron | 30.0% |
| CGTTAGCGCAATAAAAAAAA+CGG | + | chr4_4:48539612-48539631 | None:intergenic | 30.0% | |
| AATAAGAGGAATTGCTCATT+TGG | + | chr4_4:48540065-48540084 | None:intergenic | 30.0% | |
| TTTCTTACTTCTACCAGATA+AGG | + | chr4_4:48540632-48540651 | None:intergenic | 30.0% | |
| ! | CTCTTTTTGAACCAAAAACA+AGG | + | chr4_4:48540786-48540805 | None:intergenic | 30.0% |
| GGTTCAAAAAGAGACAAAAT+TGG | - | chr4_4:48540793-48540812 | Msa0684920:CDS | 30.0% | |
| AAAAGAGACAAAATTGGAGA+AGG | - | chr4_4:48540799-48540818 | Msa0684920:CDS | 30.0% | |
| GATTCACAAGAAAAATTGAC+AGG | + | chr4_4:48540998-48541017 | None:intergenic | 30.0% | |
| GGATAATGATGAAACCTTAT+TGG | + | chr4_4:48541071-48541090 | None:intergenic | 30.0% | |
| ACATCAATGTCTAACACAAA+TGG | - | chr4_4:48541217-48541236 | Msa0684920:intron | 30.0% | |
| TAGACAAACAATAACACTCA+TGG | + | chr4_4:48541480-48541499 | None:intergenic | 30.0% | |
| ! | GATGTCATTTAAATCTCACT+TGG | - | chr4_4:48541541-48541560 | Msa0684920:intron | 30.0% |
| TTTAAATCTCACTTGGAACT+AGG | - | chr4_4:48541548-48541567 | Msa0684920:intron | 30.0% | |
| TTAAATCTCACTTGGAACTA+GGG | - | chr4_4:48541549-48541568 | Msa0684920:intron | 30.0% | |
| AAAAGTAGGGCTTGAAATTT+AGG | + | chr4_4:48541592-48541611 | None:intergenic | 30.0% | |
| TTATACGGCTCTTCAAAATT+TGG | + | chr4_4:48541812-48541831 | None:intergenic | 30.0% | |
| !!! | TACTCTACTGTTTTTTTGAC+AGG | + | chr4_4:48541997-48542016 | None:intergenic | 30.0% |
| !!! | TTGTTTTTTTTCCCTTTGAC+AGG | + | chr4_4:48542031-48542050 | None:intergenic | 30.0% |
| AAAAAACAGTGTAGTACAAG+TGG | - | chr4_4:48542049-48542068 | Msa0684920:intron | 30.0% | |
| GACTTTGTTAGTCAATTTCA+GGG | + | chr4_4:48542437-48542456 | None:intergenic | 30.0% | |
| AGACTTTGTTAGTCAATTTC+AGG | + | chr4_4:48542438-48542457 | None:intergenic | 30.0% | |
| GAGGAAATTCAAATACTTTG+AGG | - | chr4_4:48542755-48542774 | Msa0684920:intron | 30.0% | |
| TTGAGGTGAATTTCATTGTT+TGG | - | chr4_4:48542772-48542791 | Msa0684920:intron | 30.0% | |
| GTGAATTTCATTGTTTGGAT+GGG | - | chr4_4:48542777-48542796 | Msa0684920:intron | 30.0% | |
| GAGAATGTAATGTAATGTTG+AGG | - | chr4_4:48542799-48542818 | Msa0684920:intron | 30.0% | |
| TGAGGAAATGTAATGTTATG+AGG | - | chr4_4:48542817-48542836 | Msa0684920:intron | 30.0% | |
| GAGGAAATGTAATGTTATGA+GGG | - | chr4_4:48542818-48542837 | Msa0684920:intron | 30.0% | |
| AATTTGTCCAATAGTGTGTT+TGG | + | chr4_4:48542910-48542929 | None:intergenic | 30.0% | |
| !!! | GATTTTGATTGATGTCAAGA+TGG | - | chr4_4:48542973-48542992 | Msa0684920:intron | 30.0% |
| CAAAAGAGAAGAATTGATCA+GGG | + | chr4_4:48543306-48543325 | None:intergenic | 30.0% | |
| TCAAAAGAGAAGAATTGATC+AGG | + | chr4_4:48543307-48543326 | None:intergenic | 30.0% | |
| ATTGATAAGGTTAAGAGAAG+AGG | - | chr4_4:48543360-48543379 | Msa0684920:CDS | 30.0% | |
| TAACTCTTAGGTATAGTGTT+AGG | + | chr4_4:48543577-48543596 | None:intergenic | 30.0% | |
| !!! | TTTTTAGGATGCTAACTCTT+AGG | + | chr4_4:48543589-48543608 | None:intergenic | 30.0% |
| ! | TTTAACACTGCTGCATTTTT+AGG | + | chr4_4:48543604-48543623 | None:intergenic | 30.0% |
| ! | TTACTTCTTTTCTCAGACAA+CGG | + | chr4_4:48543687-48543706 | None:intergenic | 30.0% |
| TTCAGCAAATACCTTACAAT+CGG | - | chr4_4:48543761-48543780 | Msa0684920:intron | 30.0% | |
| TTCATTGAAAAGGTCATCTA+TGG | + | chr4_4:48543859-48543878 | None:intergenic | 30.0% | |
| ! | ATAGATGACCTTTTCAATGA+AGG | - | chr4_4:48543858-48543877 | Msa0684920:intron | 30.0% |
| AAATATCTTACTGTCCATTG+TGG | + | chr4_4:48543994-48544013 | None:intergenic | 30.0% | |
| TAAAAGTTAGTTACGCTAGT+TGG | + | chr4_4:48544133-48544152 | None:intergenic | 30.0% | |
| ATTTATACTAGCAGAAAGAC+GGG | - | chr4_4:48544365-48544384 | Msa0684920:intron | 30.0% | |
| ATACCCTTGTGACTTATTTA+TGG | - | chr4_4:48544874-48544893 | Msa0684920:intron | 30.0% | |
| AATAGCAAAACTTAGTCTAG+CGG | - | chr4_4:48544898-48544917 | Msa0684920:intron | 30.0% | |
| ! | CTGTTTTCAATTAAGCACAA+AGG | - | chr4_4:48544925-48544944 | Msa0684920:intron | 30.0% |
| ! | CTTTAAGAATATGTTGGATG+GGG | + | chr4_4:48545033-48545052 | None:intergenic | 30.0% |
| AACAAATTATGTTCTTCTCC+TGG | - | chr4_4:48545238-48545257 | Msa0684920:intron | 30.0% | |
| CAAACGTGAGCAAAAAATAA+TGG | + | chr4_4:48545498-48545517 | None:intergenic | 30.0% | |
| ! | CGTTTGTTACAATTGATCAA+AGG | - | chr4_4:48545832-48545851 | Msa0684920:intron | 30.0% |
| TTACAATTGATCAAAGGCTA+AGG | - | chr4_4:48545838-48545857 | Msa0684920:intron | 30.0% | |
| GGAAGAGATATGAAAATACT+TGG | - | chr4_4:48545945-48545964 | Msa0684920:intron | 30.0% | |
| AAATACTTGGCAATCTTTGT+CGG | - | chr4_4:48545958-48545977 | Msa0684920:intron | 30.0% | |
| GCCAATTATAAAATAACACG+TGG | + | chr4_4:48546141-48546160 | None:intergenic | 30.0% | |
| !!! | CAAAATTTTTTGTGTCGTGT+AGG | - | chr4_4:48546412-48546431 | Msa0684920:CDS | 30.0% |
| !! | TTGAAGAGGTATGTTTTTGT+TGG | - | chr4_4:48546537-48546556 | Msa0684920:CDS | 30.0% |
| AATGAGCAAATAAAGAGCTA+TGG | - | chr4_4:48546694-48546713 | Msa0684920:CDS | 30.0% | |
| GAACGTACATTGTTTACAGT+CGG | + | chr4_4:48537381-48537400 | None:intergenic | 35.0% | |
| GAAAGAGAAGTTATGAGAAG+AGG | + | chr4_4:48537428-48537447 | None:intergenic | 35.0% | |
| CTCTTTCTGCAAGAGTTAAA+AGG | - | chr4_4:48537441-48537460 | Msa0684920:three_prime_UTR | 35.0% | |
| TTTGGTTACTTCCAATACCA+TGG | + | chr4_4:48537556-48537575 | None:intergenic | 35.0% | |
| !! | ACAACCTCCTTTGTTTCTTT+TGG | + | chr4_4:48537619-48537638 | None:intergenic | 35.0% |
| AGAAACAAAGGAGGTTGTTT+AGG | - | chr4_4:48537621-48537640 | Msa0684920:exon | 35.0% | |
| TCAGAAATGGCTATAGAAAG+AGG | - | chr4_4:48537761-48537780 | Msa0684920:CDS | 35.0% | |
| CAGAAATGGCTATAGAAAGA+GGG | - | chr4_4:48537762-48537781 | Msa0684920:CDS | 35.0% | |
| GTTGGGTAAATCAATTCTCT+TGG | - | chr4_4:48537805-48537824 | Msa0684920:intron | 35.0% | |
| AAAGTTAAGAGTGACTTACC+GGG | + | chr4_4:48537854-48537873 | None:intergenic | 35.0% | |
| CAAAGTTAAGAGTGACTTAC+CGG | + | chr4_4:48537855-48537874 | None:intergenic | 35.0% | |
| TACCTAAAGCAATAAGGCAA+AGG | - | chr4_4:48537995-48538014 | Msa0684920:intron | 35.0% | |
| !!! | AGGCAAAGGCTGATTTTTTA+CGG | - | chr4_4:48538009-48538028 | Msa0684920:intron | 35.0% |
| AAAAATGCCACTACAAACGT+GGG | - | chr4_4:48538340-48538359 | Msa0684920:intron | 35.0% | |
| CACTACCATAAGAACACTAT+AGG | + | chr4_4:48538834-48538853 | None:intergenic | 35.0% | |
| CTATAGTGTTCTTATGGTAG+TGG | - | chr4_4:48538863-48538882 | Msa0684920:intron | 35.0% | |
| !!! | GTGAGTACTCCTCTTTTTTT+AGG | + | chr4_4:48539577-48539596 | None:intergenic | 35.0% |
| TACTATATGGGAAGGAGATA+GGG | + | chr4_4:48539864-48539883 | None:intergenic | 35.0% | |
| ATACTATATGGGAAGGAGAT+AGG | + | chr4_4:48539865-48539884 | None:intergenic | 35.0% | |
| !!! | TACATCGAGTGTCATTTTGT+TGG | + | chr4_4:48540419-48540438 | None:intergenic | 35.0% |
| TAAGTACAAGATGTGACAAG+AGG | + | chr4_4:48540560-48540579 | None:intergenic | 35.0% | |
| TTAACCTCATATGCCTTATC+TGG | - | chr4_4:48540616-48540635 | Msa0684920:intron | 35.0% | |
| !!! | TAGCAGAACGTTGTTTTTCT+AGG | - | chr4_4:48540654-48540673 | Msa0684920:CDS | 35.0% |
| !!! | AGCAGAACGTTGTTTTTCTA+GGG | - | chr4_4:48540655-48540674 | Msa0684920:CDS | 35.0% |
| !! | TTTGAAGTACCAGGAAGTTT+TGG | - | chr4_4:48540887-48540906 | Msa0684920:intron | 35.0% |
| TTGTGGAAAATGAGCATAGA+AGG | - | chr4_4:48540927-48540946 | Msa0684920:intron | 35.0% | |
| TGTGGAAAATGAGCATAGAA+GGG | - | chr4_4:48540928-48540947 | Msa0684920:intron | 35.0% | |
| AAATGACCCTCTTATCATCA+GGG | + | chr4_4:48541045-48541064 | None:intergenic | 35.0% | |
| AAAATGACCCTCTTATCATC+AGG | + | chr4_4:48541046-48541065 | None:intergenic | 35.0% | |
| !!! | GAGGGTCATTTTTTCCAATA+AGG | - | chr4_4:48541054-48541073 | Msa0684920:intron | 35.0% |
| AAACAGTAGAGTAGTACAAG+TGG | - | chr4_4:48542004-48542023 | Msa0684920:intron | 35.0% | |
| !! | GTCACGTTTTAAACAATCCT+AGG | + | chr4_4:48542142-48542161 | None:intergenic | 35.0% |
| ACTAACAGAGTCTACATTCA+GGG | + | chr4_4:48542405-48542424 | None:intergenic | 35.0% | |
| TTTGCAATTTCTCTGCATTC+AGG | - | chr4_4:48542473-48542492 | Msa0684920:intron | 35.0% | |
| TTGCAATTTCTCTGCATTCA+GGG | - | chr4_4:48542474-48542493 | Msa0684920:intron | 35.0% | |
| ! | TTCTCTAGGAAAAGAGACTT+TGG | + | chr4_4:48542650-48542669 | None:intergenic | 35.0% |
| AAACTTGAGTGTGTTTGGAT+TGG | - | chr4_4:48542704-48542723 | Msa0684920:intron | 35.0% | |
| AACTTGAGTGTGTTTGGATT+GGG | - | chr4_4:48542705-48542724 | Msa0684920:intron | 35.0% | |
| GGTGAATTTCATTGTTTGGA+TGG | - | chr4_4:48542776-48542795 | Msa0684920:intron | 35.0% | |
| GAGGGAATTCAAATACTTTG+AGG | - | chr4_4:48542836-48542855 | Msa0684920:intron | 35.0% | |
| ! | GAAATCTCACTTGGTGAAAT+TGG | + | chr4_4:48543123-48543142 | None:intergenic | 35.0% |
| AAACACCAGAAGGATTGATA+AGG | - | chr4_4:48543347-48543366 | Msa0684920:CDS | 35.0% | |
| CTTAACCTTATCAATCCTTC+TGG | + | chr4_4:48543355-48543374 | None:intergenic | 35.0% | |
| TACGATGTGTATAATGACCT+CGG | - | chr4_4:48543445-48543464 | Msa0684920:intron | 35.0% | |
| ! | AAGAACAGGTCGTTTAAGTT+CGG | + | chr4_4:48543488-48543507 | None:intergenic | 35.0% |
| TAACAATGTCTATGTTCCGA+GGG | - | chr4_4:48543704-48543723 | Msa0684920:intron | 35.0% | |
| ! | GAGTTGCTTTAATTCTGAGA+AGG | + | chr4_4:48543736-48543755 | None:intergenic | 35.0% |
| TGAATTTACTCATCAATGGG+TGG | - | chr4_4:48544199-48544218 | Msa0684920:intron | 35.0% | |
| AATGGGTGGTGATTTGAATA+TGG | - | chr4_4:48544213-48544232 | Msa0684920:intron | 35.0% | |
| !!! | AGGACAGATTCTTTTGGTTT+AGG | - | chr4_4:48544239-48544258 | Msa0684920:intron | 35.0% |
| !!! | GGACAGATTCTTTTGGTTTA+GGG | - | chr4_4:48544240-48544259 | Msa0684920:intron | 35.0% |
| TGGTTTAGGGATGAAGAATT+TGG | - | chr4_4:48544253-48544272 | Msa0684920:intron | 35.0% | |
| TAATCCTTGTTGCATCCAAT+TGG | - | chr4_4:48544297-48544316 | Msa0684920:intron | 35.0% | |
| TGGAAGATAGATTCTGACAT+TGG | - | chr4_4:48544844-48544863 | Msa0684920:intron | 35.0% | |
| GGAAGATAGATTCTGACATT+GGG | - | chr4_4:48544845-48544864 | Msa0684920:intron | 35.0% | |
| ATAGATTCTGACATTGGGAA+TGG | - | chr4_4:48544850-48544869 | Msa0684920:intron | 35.0% | |
| ATAGCAAAACTTAGTCTAGC+GGG | - | chr4_4:48544899-48544918 | Msa0684920:intron | 35.0% | |
| CTAGATATGACCTGTGTAAT+GGG | + | chr4_4:48545079-48545098 | None:intergenic | 35.0% | |
| CATTACACAGGTCATATCTA+GGG | - | chr4_4:48545078-48545097 | Msa0684920:intron | 35.0% | |
| TTCCTTGAGCAATTGAGTTT+AGG | - | chr4_4:48545164-48545183 | Msa0684920:intron | 35.0% | |
| TTCCTAAACTCAATTGCTCA+AGG | + | chr4_4:48545169-48545188 | None:intergenic | 35.0% | |
| ! | TGTCATTTGACAAGGTTGAA+GGG | + | chr4_4:48545219-48545238 | None:intergenic | 35.0% |
| ! | TTGTCATTTGACAAGGTTGA+AGG | + | chr4_4:48545220-48545239 | None:intergenic | 35.0% |
| ! | AATCTTTGTCGGTTGTATTG+AGG | - | chr4_4:48545969-48545988 | Msa0684920:intron | 35.0% |
| ! | ATCTTTGTCGGTTGTATTGA+GGG | - | chr4_4:48545970-48545989 | Msa0684920:intron | 35.0% |
| !! | GTTTGATTTGTGATTAACGG+AGG | - | chr4_4:48546071-48546090 | Msa0684920:intron | 35.0% |
| TGATTAACGGAGGTAAAAGA+GGG | - | chr4_4:48546081-48546100 | Msa0684920:intron | 35.0% | |
| !!! | TTTTTTGTGTCGTGTAGGAA+TGG | - | chr4_4:48546417-48546436 | Msa0684920:CDS | 35.0% |
| ! | CAGCAGGACCATAAATTTTA+GGG | + | chr4_4:48546463-48546482 | None:intergenic | 35.0% |
| ! | TCAGCAGGACCATAAATTTT+AGG | + | chr4_4:48546464-48546483 | None:intergenic | 35.0% |
| TTGTTGCTCAATCATTTCAG+TGG | + | chr4_4:48546498-48546517 | None:intergenic | 35.0% | |
| ATGATTGAGCAACAAATCAG+AGG | - | chr4_4:48546503-48546522 | Msa0684920:CDS | 35.0% | |
| GAGAAGTTATGGTTATGGGA+TGG | + | chr4_4:48537403-48537422 | None:intergenic | 40.0% | |
| GGGAGAGAAGTTATGGTTAT+GGG | + | chr4_4:48537407-48537426 | None:intergenic | 40.0% | |
| AGGGAGAGAAGTTATGGTTA+TGG | + | chr4_4:48537408-48537427 | None:intergenic | 40.0% | |
| ! | GTTTTCATGTTGGATCGTCA+AGG | - | chr4_4:48537579-48537598 | Msa0684920:three_prime_UTR | 40.0% |
| AACAAAGGAGGTTGTTTAGG+AGG | - | chr4_4:48537624-48537643 | Msa0684920:CDS | 40.0% | |
| ! | TGTTGGTTGAACAGTAACTG+TGG | + | chr4_4:48537726-48537745 | None:intergenic | 40.0% |
| GTTACTGTTCAACCAACAGT+TGG | - | chr4_4:48537728-48537747 | Msa0684920:CDS | 40.0% | |
| CGGTAAGTCACTCTTAACTT+TGG | - | chr4_4:48537853-48537872 | Msa0684920:intron | 40.0% | |
| GTTGGGTGCAATAAGATAGT+CGG | - | chr4_4:48537883-48537902 | Msa0684920:intron | 40.0% | |
| ! | AGCCTTTGCCTTATTGCTTT+AGG | + | chr4_4:48538000-48538019 | None:intergenic | 40.0% |
| CAAAAATGCCACTACAAACG+TGG | - | chr4_4:48538339-48538358 | Msa0684920:intron | 40.0% | |
| GAAAAACGGATAAACGAGAG+TGG | + | chr4_4:48538685-48538704 | None:intergenic | 40.0% | |
| !!! | TGTGACACATAGTTTTGTGG+TGG | - | chr4_4:48539094-48539113 | Msa0684920:intron | 40.0% |
| ATAGAAAGAGCAAGAGCAAG+AGG | - | chr4_4:48539514-48539533 | Msa0684920:intron | 40.0% | |
| TCTACCAGATAAGGCATATG+AGG | + | chr4_4:48540623-48540642 | None:intergenic | 40.0% | |
| !!! | GCAGAACGTTGTTTTTCTAG+GGG | - | chr4_4:48540656-48540675 | Msa0684920:CDS | 40.0% |
| GAGACAAAATTGGAGAAGGA+AGG | - | chr4_4:48540803-48540822 | Msa0684920:CDS | 40.0% | |
| TTGGAGAAGGAAGGAATCAA+AGG | - | chr4_4:48540812-48540831 | Msa0684920:CDS | 40.0% | |
| ! | GAAGCTGAATTTGAAGTACC+AGG | - | chr4_4:48540878-48540897 | Msa0684920:intron | 40.0% |
| CCAATATCTCCAAAACTTCC+TGG | + | chr4_4:48540899-48540918 | None:intergenic | 40.0% | |
| !!! | CCAGGAAGTTTTGGAGATAT+TGG | - | chr4_4:48540896-48540915 | Msa0684920:intron | 40.0% |
| AGATATTGGTGCAGTTCTTG+TGG | - | chr4_4:48540910-48540929 | Msa0684920:intron | 40.0% | |
| ATGACAACCCTGATGATAAG+AGG | - | chr4_4:48541035-48541054 | Msa0684920:intron | 40.0% | |
| TGACAACCCTGATGATAAGA+GGG | - | chr4_4:48541036-48541055 | Msa0684920:intron | 40.0% | |
| TAGTTTGATCCCGAGTTTGT+TGG | - | chr4_4:48541780-48541799 | Msa0684920:intron | 40.0% | |
| TTGGTTTCCACCAACAAACT+CGG | + | chr4_4:48541793-48541812 | None:intergenic | 40.0% | |
| AACAGTGTAGTACAAGTGGT+CGG | - | chr4_4:48542053-48542072 | Msa0684920:intron | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+AGG | - | chr4_4:48542327-48542346 | Msa0684920:intron | 40.0% |
| GACGACTCATTTCCTATTCA+GGG | + | chr4_4:48542342-48542361 | None:intergenic | 40.0% | |
| TGACGACTCATTTCCTATTC+AGG | + | chr4_4:48542343-48542362 | None:intergenic | 40.0% | |
| ACTAACGAAGTCTGCATTCA+GGG | + | chr4_4:48542373-48542392 | None:intergenic | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | + | chr4_4:48542406-48542425 | None:intergenic | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | + | chr4_4:48542327-48542346 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | + | chr4_4:48542326-48542345 | None:intergenic | 40.0% |
| ACTTGAGTGTGTTTGGATTG+GGG | - | chr4_4:48542706-48542725 | Msa0684920:intron | 40.0% | |
| ! | TGTTTGGATTGGGGAATGTT+TGG | - | chr4_4:48542715-48542734 | Msa0684920:intron | 40.0% |
| ACCTCATCCAAACACACTAT+TGG | - | chr4_4:48542900-48542919 | Msa0684920:intron | 40.0% | |
| TCCAATAGTGTGTTTGGATG+AGG | + | chr4_4:48542904-48542923 | None:intergenic | 40.0% | |
| ! | TTACCATCTGAAACACCAGA+AGG | - | chr4_4:48543337-48543356 | Msa0684920:CDS | 40.0% |
| AATCCTTCTGGTGTTTCAGA+TGG | + | chr4_4:48543343-48543362 | None:intergenic | 40.0% | |
| GAGGAACTGAAAACTTTACG+AGG | - | chr4_4:48543379-48543398 | Msa0684920:CDS | 40.0% | |
| CTGAAAACTTTACGAGGCAA+TGG | - | chr4_4:48543385-48543404 | Msa0684920:CDS | 40.0% | |
| ! | AGAACAGGTCGTTTAAGTTC+GGG | + | chr4_4:48543487-48543506 | None:intergenic | 40.0% |
| GAACTTAAACGACCTGTTCT+TGG | - | chr4_4:48543487-48543506 | Msa0684920:intron | 40.0% | |
| GCAAAGAACATCCATATCCT+AGG | - | chr4_4:48543512-48543531 | Msa0684920:intron | 40.0% | |
| GTAACAATGTCTATGTTCCG+AGG | - | chr4_4:48543703-48543722 | Msa0684920:intron | 40.0% | |
| !! | ACTACAGCTGTTTTCACAAC+CGG | + | chr4_4:48543804-48543823 | None:intergenic | 40.0% |
| CATCTATGGCTGAGAAAAGA+GGG | + | chr4_4:48543845-48543864 | None:intergenic | 40.0% | |
| TCATCTATGGCTGAGAAAAG+AGG | + | chr4_4:48543846-48543865 | None:intergenic | 40.0% | |
| TATCTTACTGTCCATTGTGG+CGG | + | chr4_4:48543991-48544010 | None:intergenic | 40.0% | |
| TGGTGATTTGAATATGGCAG+AGG | - | chr4_4:48544219-48544238 | Msa0684920:intron | 40.0% | |
| TTTGGAAGACAGACTATAGC+AGG | - | chr4_4:48544271-48544290 | Msa0684920:intron | 40.0% | |
| TTGTTGCATCCAATTGGTCA+CGG | - | chr4_4:48544303-48544322 | Msa0684920:intron | 40.0% | |
| AGTAGTATACCGTGACCAAT+TGG | + | chr4_4:48544315-48544334 | None:intergenic | 40.0% | |
| ATCATAACAGGAAGCAATGC+TGG | + | chr4_4:48545008-48545027 | None:intergenic | 40.0% | |
| TTGGATGGGGAAATCATAAC+AGG | + | chr4_4:48545020-48545039 | None:intergenic | 40.0% | |
| CCTAGATATGACCTGTGTAA+TGG | + | chr4_4:48545080-48545099 | None:intergenic | 40.0% | |
| CCATTACACAGGTCATATCT+AGG | - | chr4_4:48545077-48545096 | Msa0684920:intron | 40.0% | |
| GTCATTTGACAAGGTTGAAG+GGG | + | chr4_4:48545218-48545237 | None:intergenic | 40.0% | |
| ! | TCTTTGTCGGTTGTATTGAG+GGG | - | chr4_4:48545971-48545990 | Msa0684920:intron | 40.0% |
| GTGATTAACGGAGGTAAAAG+AGG | - | chr4_4:48546080-48546099 | Msa0684920:intron | 40.0% | |
| ! | ACCTCTTTCGGCACATTTTT+GGG | + | chr4_4:48546312-48546331 | None:intergenic | 40.0% |
| ! | TACCTCTTTCGGCACATTTT+TGG | + | chr4_4:48546313-48546332 | None:intergenic | 40.0% |
| !! | GGGTCAAGTTTGCTTTTCAA+TGG | + | chr4_4:48546443-48546462 | None:intergenic | 40.0% |
| GAGAAGAGGGAGAGAAGTTA+TGG | + | chr4_4:48537414-48537433 | None:intergenic | 45.0% | |
| TTGAACAAGCCATGTCTCCA+TGG | - | chr4_4:48537536-48537555 | Msa0684920:three_prime_UTR | 45.0% | |
| AAGCCATGTCTCCATGGTAT+TGG | - | chr4_4:48537542-48537561 | Msa0684920:three_prime_UTR | 45.0% | |
| CTTCCAATACCATGGAGACA+TGG | + | chr4_4:48537548-48537567 | None:intergenic | 45.0% | |
| GTGCAGCAAAATCAAAGCTG+TGG | - | chr4_4:48537652-48537671 | Msa0684920:CDS | 45.0% | |
| ACTGTTCAACCAACAGTTGG+AGG | - | chr4_4:48537731-48537750 | Msa0684920:CDS | 45.0% | |
| CTGTTCAACCAACAGTTGGA+GGG | - | chr4_4:48537732-48537751 | Msa0684920:CDS | 45.0% | |
| ! | TGGAGGGCTTTTCTCAGAAA+TGG | - | chr4_4:48537748-48537767 | Msa0684920:CDS | 45.0% |
| AGCTTCGTTTCAACACTCGT+TGG | + | chr4_4:48538281-48538300 | None:intergenic | 45.0% | |
| CTCTATACCCACGTTTGTAG+TGG | + | chr4_4:48538350-48538369 | None:intergenic | 45.0% | |
| CACTACAAACGTGGGTATAG+AGG | - | chr4_4:48538348-48538367 | Msa0684920:intron | 45.0% | |
| ! | TCAGTGAGTGTTTGGAGTGA+AGG | + | chr4_4:48538588-48538607 | None:intergenic | 45.0% |
| ! | GGGAAGGAGATAGGGATTTT+AGG | + | chr4_4:48539856-48539875 | None:intergenic | 45.0% |
| ! | GTTCTTGATGGCTTTCTCAC+TGG | - | chr4_4:48540971-48540990 | Msa0684920:intron | 45.0% |
| ATCATCAGGGTTGTCATGCT+TGG | + | chr4_4:48541032-48541051 | None:intergenic | 45.0% | |
| !! | TTTGATCCCGAGTTTGTTGG+TGG | - | chr4_4:48541783-48541802 | Msa0684920:intron | 45.0% |
| TGGTTTCCACCAACAAACTC+GGG | + | chr4_4:48541792-48541811 | None:intergenic | 45.0% | |
| AGTACAAGTGGTCCTGTCAA+AGG | - | chr4_4:48542016-48542035 | Msa0684920:intron | 45.0% | |
| GTACAAGTGGTCCTGTCAAA+GGG | - | chr4_4:48542017-48542036 | Msa0684920:intron | 45.0% | |
| ACAGTGTAGTACAAGTGGTC+GGG | - | chr4_4:48542054-48542073 | Msa0684920:intron | 45.0% | |
| GACTAACGAAGTCTGCATTC+AGG | + | chr4_4:48542374-48542393 | None:intergenic | 45.0% | |
| TGACTACTCCTTTCCCATTC+AGG | - | chr4_4:48542504-48542523 | Msa0684920:intron | 45.0% | |
| GACTACTCCTTTCCCATTCA+GGG | - | chr4_4:48542505-48542524 | Msa0684920:intron | 45.0% | |
| CTTTAGTCCCTGAATGGGAA+AGG | + | chr4_4:48542515-48542534 | None:intergenic | 45.0% | |
| ! | TTGGATTGGGGAATGTTTGG+AGG | - | chr4_4:48542718-48542737 | Msa0684920:intron | 45.0% |
| ! | TGGATTGGGGAATGTTTGGA+GGG | - | chr4_4:48542719-48542738 | Msa0684920:intron | 45.0% |
| GGAGGGAATGTAATGTTACG+AGG | - | chr4_4:48542736-48542755 | Msa0684920:intron | 45.0% | |
| ATAGGGGGTGAAATCTCACT+TGG | + | chr4_4:48543132-48543151 | None:intergenic | 45.0% | |
| ACTTTACGAGGCAATGGACA+AGG | - | chr4_4:48543391-48543410 | Msa0684920:CDS | 45.0% | |
| CTTAAACGACCTGTTCTTGG+TGG | - | chr4_4:48543490-48543509 | Msa0684920:intron | 45.0% | |
| TGTTCTTTGCCACCAAGAAC+AGG | + | chr4_4:48543502-48543521 | None:intergenic | 45.0% | |
| GTTCTACAACGCCTAGGATA+TGG | + | chr4_4:48543526-48543545 | None:intergenic | 45.0% | |
| ! | TATCCTAGGCGTTGTAGAAC+TGG | - | chr4_4:48543526-48543545 | Msa0684920:intron | 45.0% |
| GGTTGTGAAAACAGCTGTAG+TGG | - | chr4_4:48543803-48543822 | Msa0684920:intron | 45.0% | |
| !! | GCTGTAGTGGACAAGAATCT+TGG | - | chr4_4:48543816-48543835 | Msa0684920:intron | 45.0% |
| AGAAACCCTTTCTCAGCTTG+CGG | + | chr4_4:48543897-48543916 | None:intergenic | 45.0% | |
| ATCTTACTGTCCATTGTGGC+GGG | + | chr4_4:48543990-48544009 | None:intergenic | 45.0% | |
| ! | TGGCAGAGGACAGATTCTTT+TGG | - | chr4_4:48544233-48544252 | Msa0684920:intron | 45.0% |
| GTGACCAATTGGATGCAACA+AGG | + | chr4_4:48544304-48544323 | None:intergenic | 45.0% | |
| CGTTAGTGCAGTAGAAAGAG+CGG | + | chr4_4:48544409-48544428 | None:intergenic | 45.0% | |
| ! | CCACGACATGTTTTCAGCAA+TGG | + | chr4_4:48544827-48544846 | None:intergenic | 45.0% |
| CCATTGCTGAAAACATGTCG+TGG | - | chr4_4:48544824-48544843 | Msa0684920:intron | 45.0% | |
| ACAATCGTGTCCCATTACAC+AGG | - | chr4_4:48545066-48545085 | Msa0684920:intron | 45.0% | |
| CGGAGGTAAAAGAGGGTTAA+CGG | - | chr4_4:48546088-48546107 | Msa0684920:intron | 45.0% | |
| GGAGGTAAAAGAGGGTTAAC+GGG | - | chr4_4:48546089-48546108 | Msa0684920:intron | 45.0% | |
| GAGGTAAAAGAGGGTTAACG+GGG | - | chr4_4:48546090-48546109 | Msa0684920:intron | 45.0% | |
| !!! | CTTTCGGCACATTTTTGGGT+TGG | + | chr4_4:48546308-48546327 | None:intergenic | 45.0% |
| ACCCAAAAATGTGCCGAAAG+AGG | - | chr4_4:48546308-48546327 | Msa0684920:intron | 45.0% | |
| !! | GTGGTTATTGCTGATTCAGC+AGG | + | chr4_4:48546479-48546498 | None:intergenic | 45.0% |
| AGGACATGCTACAGTTGAAG+AGG | - | chr4_4:48546523-48546542 | Msa0684920:CDS | 45.0% | |
| !!! | TTCAGGAGCGCTTTTTCTTC+AGG | + | chr4_4:48546766-48546785 | None:intergenic | 45.0% |
| ! | TTCAGGAGCAAGTTGACTTC+AGG | + | chr4_4:48546783-48546802 | None:intergenic | 45.0% |
| !!! | TTCAGGAGCGCTTTTTCTTC+AGG | + | chr4_4:48546766-48546785 | None:intergenic | 45.0% |
| !!! | TAATTTTATTTAATTACTAA+AGG | - | chr4_4:48538651-48538670 | Msa0684920:intron | 5.0% |
| !! | GTATAAAATAATTTAAATAA+AGG | + | chr4_4:48539005-48539024 | None:intergenic | 5.0% |
| !! | ATAAAAAATAGTTTAAATAA+AGG | + | chr4_4:48539140-48539159 | None:intergenic | 5.0% |
| !! | TTGTTTAATATTTAAATAAA+TGG | - | chr4_4:48539989-48540008 | Msa0684920:intron | 5.0% |
| !! | TTAATTAATTATTTAATTGT+TGG | + | chr4_4:48540108-48540127 | None:intergenic | 5.0% |
| !!! | TTGTTTTTTTTTTTTTTTTA+AGG | - | chr4_4:48542112-48542131 | Msa0684920:intron | 5.0% |
| !! | AATTATTATTGAAATAATTT+AGG | - | chr4_4:48542175-48542194 | Msa0684920:intron | 5.0% |
| !!! | ATAATTGTATAATAATTTTA+GGG | + | chr4_4:48542548-48542567 | None:intergenic | 5.0% |
| !!! | TTTAAAAAATTTAAAATTCT+AGG | + | chr4_4:48542869-48542888 | None:intergenic | 5.0% |
| !! | CTTATATTAATAAAATAATA+TGG | - | chr4_4:48545869-48545888 | Msa0684920:intron | 5.0% |
| GAGAAAAGCCCTCCAACTGT+TGG | + | chr4_4:48537743-48537762 | None:intergenic | 50.0% | |
| TGACTTACCGGGATCTAGCT+CGG | + | chr4_4:48537843-48537862 | None:intergenic | 50.0% | |
| CTTCCACTGATCTATGCGTC+TGG | + | chr4_4:48540847-48540866 | None:intergenic | 50.0% | |
| TTAAGTTCGGGATCGCTGTC+TGG | + | chr4_4:48543475-48543494 | None:intergenic | 50.0% | |
| CTTCCAGTTCTACAACGCCT+AGG | + | chr4_4:48543532-48543551 | None:intergenic | 50.0% | |
| TCTGAGAAGGATTCGTCCCT+CGG | + | chr4_4:48543723-48543742 | None:intergenic | 50.0% | |
| TGCGTGGAAAGCCGATTGTA+AGG | + | chr4_4:48543775-48543794 | None:intergenic | 50.0% | |
| ! | GGCTTTCCACGCACTTTTAC+CGG | - | chr4_4:48543782-48543801 | Msa0684920:intron | 50.0% |
| ! | TCACAACCGGTAAAAGTGCG+TGG | + | chr4_4:48543791-48543810 | None:intergenic | 50.0% |
| TTCTTGCGTCTGTGTTGCCA+AGG | - | chr4_4:48543913-48543932 | Msa0684920:intron | 50.0% | |
| TTGACAAGCCTGACCAACCT+TGG | + | chr4_4:48543933-48543952 | None:intergenic | 50.0% | |
| GTTGGTCAGGCTTGTCAATG+AGG | - | chr4_4:48543935-48543954 | Msa0684920:intron | 50.0% | |
| TCAGGCTTGTCAATGAGGCT+AGG | - | chr4_4:48543940-48543959 | Msa0684920:intron | 50.0% | |
| CAGTAGAAAGAGCGGACAGA+CGG | + | chr4_4:48544401-48544420 | None:intergenic | 50.0% | |
| GGGACACGATTGTTATGTCG+TGG | + | chr4_4:48545059-48545078 | None:intergenic | 50.0% | |
| TTCAGGAGCAAGTTGCCTTC+AGG | + | chr4_4:48546749-48546768 | None:intergenic | 50.0% | |
| TTCAGGAGCAGCTTGACTTC+AGG | + | chr4_4:48546817-48546836 | None:intergenic | 50.0% | |
| GTTAGCTCCGAGCTAGATCC+CGG | - | chr4_4:48537833-48537852 | Msa0684920:intron | 55.0% | |
| CCACTGATCTATGCGTCTGG+TGG | + | chr4_4:48540844-48540863 | None:intergenic | 55.0% | |
| CCACCAGACGCATAGATCAG+TGG | - | chr4_4:48540841-48540860 | Msa0684920:CDS | 55.0% | |
| GGAAGACCTCGTTGCGATAC+AGG | - | chr4_4:48543547-48543566 | Msa0684920:intron | 55.0% | |
| GACCTCGTTGCGATACAGGT+AGG | - | chr4_4:48543551-48543570 | Msa0684920:intron | 55.0% | |
| TTGCCTCCGCAAGCTGAGAA+AGG | - | chr4_4:48543888-48543907 | Msa0684920:intron | 55.0% | |
| TGCCTCCGCAAGCTGAGAAA+GGG | - | chr4_4:48543889-48543908 | Msa0684920:intron | 55.0% | |
| AACCCTTTCTCAGCTTGCGG+AGG | + | chr4_4:48543894-48543913 | None:intergenic | 55.0% | |
| TGCGTCTGTGTTGCCAAGGT+TGG | - | chr4_4:48543917-48543936 | Msa0684920:intron | 55.0% | |
| ! | CTGTGTTGCCAAGGTTGGTC+AGG | - | chr4_4:48543922-48543941 | Msa0684920:intron | 55.0% |
| ! | TTGTGGCGGGAGTCTCGAAA+CGG | + | chr4_4:48543977-48543996 | None:intergenic | 55.0% |
| TTTCGAGACTCCCGCCACAA+TGG | - | chr4_4:48543977-48543996 | Msa0684920:intron | 55.0% | |
| TGAAGCTTGGACGCTCCTGA+AGG | - | chr4_4:48546731-48546750 | Msa0684920:five_prime_UTR | 55.0% | |
| GATCGCTGTCTGGATCACCG+AGG | + | chr4_4:48543465-48543484 | None:intergenic | 60.0% | |
| GGCCTACCTGTATCGCAACG+AGG | + | chr4_4:48543556-48543575 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 48537376 | 48546844 | 48537376 | ID=Msa0684920;Name=Msa0684920 |
| chr4_4 | mRNA | 48537376 | 48546844 | 48537376 | ID=Msa0684920-mRNA-1;Parent=Msa0684920;Name=Msa0684920-mRNA-1;_AED=0.02;_eAED=0.02;_QI=118|1|1|1|1|1|6|246|480 |
| chr4_4 | exon | 48537376 | 48537786 | 48537376 | ID=Msa0684920-mRNA-1:exon:12031;Parent=Msa0684920-mRNA-1 |
| chr4_4 | exon | 48539896 | 48539981 | 48539896 | ID=Msa0684920-mRNA-1:exon:12030;Parent=Msa0684920-mRNA-1 |
| chr4_4 | exon | 48540218 | 48540538 | 48540218 | ID=Msa0684920-mRNA-1:exon:12029;Parent=Msa0684920-mRNA-1 |
| chr4_4 | exon | 48540652 | 48540889 | 48540652 | ID=Msa0684920-mRNA-1:exon:12028;Parent=Msa0684920-mRNA-1 |
| chr4_4 | exon | 48543145 | 48543416 | 48543145 | ID=Msa0684920-mRNA-1:exon:12027;Parent=Msa0684920-mRNA-1 |
| chr4_4 | exon | 48546366 | 48546844 | 48546366 | ID=Msa0684920-mRNA-1:exon:12026;Parent=Msa0684920-mRNA-1 |
| chr4_4 | five_prime_UTR | 48546727 | 48546844 | 48546727 | ID=Msa0684920-mRNA-1:five_prime_utr;Parent=Msa0684920-mRNA-1 |
| chr4_4 | CDS | 48546366 | 48546726 | 48546366 | ID=Msa0684920-mRNA-1:cds;Parent=Msa0684920-mRNA-1 |
| chr4_4 | CDS | 48543145 | 48543416 | 48543145 | ID=Msa0684920-mRNA-1:cds;Parent=Msa0684920-mRNA-1 |
| chr4_4 | CDS | 48540652 | 48540889 | 48540652 | ID=Msa0684920-mRNA-1:cds;Parent=Msa0684920-mRNA-1 |
| chr4_4 | CDS | 48540218 | 48540538 | 48540218 | ID=Msa0684920-mRNA-1:cds;Parent=Msa0684920-mRNA-1 |
| chr4_4 | CDS | 48539896 | 48539981 | 48539896 | ID=Msa0684920-mRNA-1:cds;Parent=Msa0684920-mRNA-1 |
| chr4_4 | CDS | 48537622 | 48537786 | 48537622 | ID=Msa0684920-mRNA-1:cds;Parent=Msa0684920-mRNA-1 |
| chr4_4 | three_prime_UTR | 48537376 | 48537621 | 48537376 | ID=Msa0684920-mRNA-1:three_prime_utr;Parent=Msa0684920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
