Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684910 | XP_013456242.1 | 97.826 | 322 | 7 | 0 | 1 | 322 | 585 | 906 | 0.0 | 660 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684910 | sp|O24370|LOX21_SOLTU | 72.360 | 322 | 88 | 1 | 1 | 322 | 579 | 899 | 1.26e-173 | 507 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684910 | A0A072UMH4 | 97.826 | 322 | 7 | 0 | 1 | 322 | 585 | 906 | 0.0 | 660 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0684910 | 0.809782 | 1.596021e-50 | -8.615850e-47 |
| Msa0002450 | Msa0684910 | 0.804225 | 2.392415e-49 | -8.615850e-47 |
| Msa0021980 | Msa0684910 | 0.823390 | 1.421517e-53 | -8.615850e-47 |
| Msa0025060 | Msa0684910 | 0.825567 | 4.370089e-54 | -8.615850e-47 |
| Msa0025090 | Msa0684910 | 0.837709 | 4.429707e-57 | -8.615850e-47 |
| Msa0026120 | Msa0684910 | 0.836506 | 8.991871e-57 | -8.615850e-47 |
| Msa0030320 | Msa0684910 | 0.823576 | 1.286198e-53 | -8.615850e-47 |
| Msa0047230 | Msa0684910 | 0.814426 | 1.549774e-51 | -8.615850e-47 |
| Msa0050320 | Msa0684910 | 0.800655 | 1.301395e-48 | -8.615850e-47 |
| Msa0053480 | Msa0684910 | 0.815930 | 7.181678e-52 | -8.615850e-47 |
| Msa0060740 | Msa0684910 | 0.806543 | 7.817153e-50 | -8.615850e-47 |
| Msa0063850 | Msa0684910 | 0.812997 | 3.199036e-51 | -8.615850e-47 |
| Msa0070090 | Msa0684910 | 0.828855 | 7.126853e-55 | -8.615850e-47 |
| Msa0077920 | Msa0684910 | 0.837863 | 4.043425e-57 | -8.615850e-47 |
| Msa0090350 | Msa0684910 | 0.816393 | 5.658741e-52 | -8.615850e-47 |
| Msa0110350 | Msa0684910 | 0.809988 | 1.441099e-50 | -8.615850e-47 |
| Msa0112800 | Msa0684910 | 0.831884 | 1.295940e-55 | -8.615850e-47 |
| Msa0117300 | Msa0684910 | 0.808450 | 3.079176e-50 | -8.615850e-47 |
| Msa0604130 | Msa0684910 | 0.967069 | 9.004000e-127 | -8.615850e-47 |
| Msa0604890 | Msa0684910 | 0.833448 | 5.302706e-56 | -8.615850e-47 |
| Msa0607410 | Msa0684910 | 0.808616 | 2.838023e-50 | -8.615850e-47 |
| Msa0607620 | Msa0684910 | 0.868443 | 6.502882e-66 | -8.615850e-47 |
| Msa0608940 | Msa0684910 | 0.801367 | 9.312427e-49 | -8.615850e-47 |
| Msa0610850 | Msa0684910 | 0.820958 | 5.209780e-53 | -8.615850e-47 |
| Msa0617470 | Msa0684910 | 0.834121 | 3.599240e-56 | -8.615850e-47 |
| Msa0636750 | Msa0684910 | 0.975574 | 3.334017e-140 | -8.615850e-47 |
| Msa0636760 | Msa0684910 | 0.964851 | 7.508430e-124 | -8.615850e-47 |
| Msa0639880 | Msa0684910 | 0.818083 | 2.359150e-52 | -8.615850e-47 |
| Msa0641020 | Msa0684910 | 0.812567 | 3.972944e-51 | -8.615850e-47 |
| Msa0641030 | Msa0684910 | 0.826441 | 2.708239e-54 | -8.615850e-47 |
| Msa0645460 | Msa0684910 | 0.916231 | 2.284332e-85 | -8.615850e-47 |
| Msa0646180 | Msa0684910 | 0.826306 | 2.915987e-54 | -8.615850e-47 |
| Msa0647860 | Msa0684910 | 0.839094 | 1.946161e-57 | -8.615850e-47 |
| Msa0648160 | Msa0684910 | 0.808137 | 3.590298e-50 | -8.615850e-47 |
| Msa0648170 | Msa0684910 | 0.814158 | 1.776095e-51 | -8.615850e-47 |
| Msa0648200 | Msa0684910 | 0.808517 | 2.978498e-50 | -8.615850e-47 |
| Msa0648300 | Msa0684910 | 0.812879 | 3.394152e-51 | -8.615850e-47 |
| Msa0649530 | Msa0684910 | 0.831738 | 1.408240e-55 | -8.615850e-47 |
| Msa0651340 | Msa0684910 | 0.825326 | 4.981937e-54 | -8.615850e-47 |
| Msa0664110 | Msa0684910 | 0.816205 | 6.235362e-52 | -8.615850e-47 |
| Msa0664130 | Msa0684910 | 0.812731 | 3.657367e-51 | -8.615850e-47 |
| Msa0675250 | Msa0684910 | 0.802429 | 5.633007e-49 | -8.615850e-47 |
| Msa0684910 | Msa0684920 | 0.957606 | 1.807728e-115 | -8.615850e-47 |
| Msa0684910 | Msa0690580 | 0.861169 | 1.239422e-63 | -8.615850e-47 |
| Msa0684910 | Msa0691140 | 0.830708 | 2.522493e-55 | -8.615850e-47 |
| Msa0684910 | Msa0691180 | 0.816573 | 5.158775e-52 | -8.615850e-47 |
| Msa0684910 | Msa0691740 | 0.820265 | 7.516785e-53 | -8.615850e-47 |
| Msa0684910 | Msa0693560 | 0.815277 | 1.003750e-51 | -8.615850e-47 |
| Msa0684910 | Msa0697490 | 0.810878 | 9.259494e-51 | -8.615850e-47 |
| Msa0684910 | Msa0700250 | 0.844253 | 8.475950e-59 | -8.615850e-47 |
| Msa0684910 | Msa0714930 | 0.819313 | 1.239981e-52 | -8.615850e-47 |
| Msa0684910 | Msa0722660 | 0.827920 | 1.198472e-54 | -8.615850e-47 |
| Msa0684910 | Msa0734190 | 0.806722 | 7.165501e-50 | -8.615850e-47 |
| Msa0684910 | Msa0752540 | 0.810277 | 1.248359e-50 | -8.615850e-47 |
| Msa0684910 | Msa0756940 | 0.830773 | 2.430943e-55 | -8.615850e-47 |
| Msa0684910 | Msa0775420 | 0.807016 | 6.209997e-50 | -8.615850e-47 |
| Msa0684910 | Msa0797210 | 0.811879 | 5.613316e-51 | -8.615850e-47 |
| Msa0684910 | Msa0836510 | 0.837133 | 6.223131e-57 | -8.615850e-47 |
| Msa0684910 | Msa0882340 | 0.800261 | 1.565770e-48 | -8.615850e-47 |
| Msa0684910 | Msa0883390 | 0.819241 | 1.287891e-52 | -8.615850e-47 |
| Msa0684910 | Msa0883410 | 0.800795 | 1.218620e-48 | -8.615850e-47 |
| Msa0684910 | Msa0887000 | 0.802342 | 5.872770e-49 | -8.615850e-47 |
| Msa0684910 | Msa0912160 | 0.805299 | 1.427434e-49 | -8.615850e-47 |
| Msa0684910 | Msa0925990 | 0.803320 | 3.688673e-49 | -8.615850e-47 |
| Msa0684910 | Msa0930090 | 0.836506 | 8.991821e-57 | -8.615850e-47 |
| Msa0684910 | Msa0957800 | 0.809653 | 1.700974e-50 | -8.615850e-47 |
| Msa0684910 | Msa0966540 | 0.808108 | 3.641070e-50 | -8.615850e-47 |
| Msa0684910 | Msa0967250 | 0.818817 | 1.608109e-52 | -8.615850e-47 |
| Msa0684910 | Msa0972930 | 0.803349 | 3.636390e-49 | -8.615850e-47 |
| Msa0684910 | Msa0984820 | 0.816758 | 4.687641e-52 | -8.615850e-47 |
| Msa0684910 | Msa0985040 | 0.813318 | 2.719106e-51 | -8.615850e-47 |
| Msa0684910 | Msa0998940 | 0.807389 | 5.177104e-50 | -8.615850e-47 |
| Msa0684910 | Msa1008950 | 0.802420 | 5.657004e-49 | -8.615850e-47 |
| Msa0684910 | Msa1008960 | 0.827717 | 1.340818e-54 | -8.615850e-47 |
| Msa0684910 | Msa1009020 | 0.813058 | 3.101070e-51 | -8.615850e-47 |
| Msa0684910 | Msa1018720 | 0.828113 | 1.076932e-54 | -8.615850e-47 |
| Msa0684910 | Msa1031220 | 0.814876 | 1.232367e-51 | -8.615850e-47 |
| Msa0684910 | Msa1033670 | 0.820688 | 6.009684e-53 | -8.615850e-47 |
| Msa0684910 | Msa1036360 | 0.834191 | 3.457266e-56 | -8.615850e-47 |
| Msa0684910 | Msa1038570 | 0.838176 | 3.358491e-57 | -8.615850e-47 |
| Msa0684910 | Msa1038580 | 0.837181 | 6.048522e-57 | -8.615850e-47 |
| Msa0684910 | Msa1038610 | 0.810104 | 1.360804e-50 | -8.615850e-47 |
| Msa0684910 | Msa1038890 | 0.807429 | 5.076975e-50 | -8.615850e-47 |
| Msa0684910 | Msa1044450 | 0.804173 | 2.453149e-49 | -8.615850e-47 |
| Msa0684910 | Msa1050320 | 0.847773 | 9.354012e-60 | -8.615850e-47 |
| Msa0684910 | Msa1055710 | 0.819170 | 1.336949e-52 | -8.615850e-47 |
| Msa0684910 | Msa1076640 | 0.834686 | 2.597295e-56 | -8.615850e-47 |
| Msa0684910 | Msa1103610 | 0.834523 | 2.852994e-56 | -8.615850e-47 |
| Msa0684910 | Msa1113210 | 0.817109 | 3.911179e-52 | -8.615850e-47 |
| Msa0684910 | Msa1128780 | 0.800688 | 1.281708e-48 | -8.615850e-47 |
| Msa0684910 | Msa1129130 | 0.808316 | 3.287896e-50 | -8.615850e-47 |
| Msa0684910 | Msa1129160 | 0.833761 | 4.429906e-56 | -8.615850e-47 |
| Msa0684910 | Msa1129470 | 0.824932 | 6.173212e-54 | -8.615850e-47 |
| Msa0684910 | Msa1147190 | 0.847796 | 9.216855e-60 | -8.615850e-47 |
| Msa0684910 | Msa1175850 | 0.809713 | 1.651161e-50 | -8.615850e-47 |
| Msa0684910 | Msa1177360 | 0.825865 | 3.713674e-54 | -8.615850e-47 |
| Msa0684910 | Msa1179130 | 0.808288 | 3.333978e-50 | -8.615850e-47 |
| Msa0684910 | Msa1182400 | 0.819290 | 1.255411e-52 | -8.615850e-47 |
| Msa0684910 | Msa1192790 | 0.814755 | 1.310642e-51 | -8.615850e-47 |
| Msa0684910 | Msa1199750 | 0.836431 | 9.395439e-57 | -8.615850e-47 |
| Msa0684910 | Msa1204390 | 0.804846 | 1.775736e-49 | -8.615850e-47 |
| Msa0684910 | Msa1208250 | 0.818506 | 1.891687e-52 | -8.615850e-47 |
| Msa0684910 | Msa1211280 | 0.830018 | 3.719644e-55 | -8.615850e-47 |
| Msa0684910 | Msa1211370 | 0.807592 | 4.687171e-50 | -8.615850e-47 |
| Msa0684910 | Msa1213130 | 0.812275 | 4.601889e-51 | -8.615850e-47 |
| Msa0684910 | Msa1213240 | 0.806221 | 9.138785e-50 | -8.615850e-47 |
| Msa0684910 | Msa1213460 | 0.803623 | 3.190871e-49 | -8.615850e-47 |
| Msa0684910 | Msa1216700 | 0.819772 | 9.745835e-53 | -8.615850e-47 |
| Msa0684910 | Msa1230190 | 0.821586 | 3.731805e-53 | -8.615850e-47 |
| Msa0684910 | Msa1235940 | 0.831519 | 1.594322e-55 | -8.615850e-47 |
| Msa0684910 | Msa1236740 | 0.809301 | 2.025135e-50 | -8.615850e-47 |
| Msa0684910 | Msa1247720 | 0.810068 | 1.384934e-50 | -8.615850e-47 |
| Msa0684910 | Msa1260510 | 0.800934 | 1.141529e-48 | -8.615850e-47 |
| Msa0684910 | Msa1272770 | 0.803704 | 3.070229e-49 | -8.615850e-47 |
| Msa0684910 | Msa1277580 | 0.831831 | 1.335672e-55 | -8.615850e-47 |
| Msa0684910 | Msa1279310 | 0.819496 | 1.126299e-52 | -8.615850e-47 |
| Msa0684910 | Msa1279320 | 0.809178 | 2.151015e-50 | -8.615850e-47 |
| Msa0684910 | Msa1294470 | 0.829111 | 6.179138e-55 | -8.615850e-47 |
| Msa0684910 | Msa1296610 | 0.801549 | 8.545667e-49 | -8.615850e-47 |
| Msa0684910 | Msa1300220 | 0.829796 | 4.211978e-55 | -8.615850e-47 |
| Msa0684910 | Msa1300360 | 0.802694 | 4.968600e-49 | -8.615850e-47 |
| Msa0684910 | Msa1308460 | 0.806148 | 9.468573e-50 | -8.615850e-47 |
| Msa0684910 | Msa1314180 | 0.805708 | 1.171847e-49 | -8.615850e-47 |
| Msa0684910 | Msa1317140 | 0.807272 | 5.480621e-50 | -8.615850e-47 |
| Msa0684910 | Msa1327400 | 0.815933 | 7.170140e-52 | -8.615850e-47 |
| Msa0684910 | Msa1327420 | 0.813132 | 2.987484e-51 | -8.615850e-47 |
| Msa0684910 | Msa1328600 | 0.834476 | 2.931725e-56 | -8.615850e-47 |
| Msa0684910 | Msa1329020 | 0.809217 | 2.110594e-50 | -8.615850e-47 |
| Msa0684910 | Msa1329820 | 0.821099 | 4.833081e-53 | -8.615850e-47 |
| Msa0684910 | Msa1339310 | 0.804739 | 1.869059e-49 | -8.615850e-47 |
| Msa0684910 | Msa1346920 | 0.810610 | 1.058406e-50 | -8.615850e-47 |
| Msa0684910 | Msa1349410 | 0.838837 | 2.268835e-57 | -8.615850e-47 |
| Msa0684910 | Msa1357380 | 0.821776 | 3.372268e-53 | -8.615850e-47 |
| Msa0684910 | Msa1359880 | 0.828318 | 9.609753e-55 | -8.615850e-47 |
| Msa0684910 | Msa1391600 | 0.852337 | 4.933677e-61 | -8.615850e-47 |
| Msa0684910 | Msa1395360 | 0.851083 | 1.117861e-60 | -8.615850e-47 |
| Msa0684910 | Msa1395700 | 0.807832 | 4.169592e-50 | -8.615850e-47 |
| Msa0684910 | Msa1413880 | 0.828936 | 6.812358e-55 | -8.615850e-47 |
| Msa0684910 | Msa1432250 | 0.824474 | 7.917474e-54 | -8.615850e-47 |
| Msa0684910 | Msa1433380 | 0.832458 | 9.345564e-56 | -8.615850e-47 |
| Msa0684910 | Msa1443440 | 0.828179 | 1.038091e-54 | -8.615850e-47 |
| Msa0684910 | Msa1445250 | 0.832335 | 1.002298e-55 | -8.615850e-47 |
| Msa0684910 | Msa1445700 | 0.824577 | 7.487302e-54 | -8.615850e-47 |
| Msa0684910 | Msa1450850 | 0.813973 | 1.951753e-51 | -8.615850e-47 |
| Msa0684910 | Msa1454320 | 0.827393 | 1.604041e-54 | -8.615850e-47 |
| Msa0684910 | Msa1454330 | 0.838363 | 3.007465e-57 | -8.615850e-47 |
| Msa0684910 | Msa1456410 | 0.822076 | 2.874067e-53 | -8.615850e-47 |
| Msa0684910 | Msa1460530 | 0.837454 | 5.148647e-57 | -8.615850e-47 |
| Msa0125810 | Msa0684910 | 0.828268 | 9.880852e-55 | -8.615850e-47 |
| Msa0130100 | Msa0684910 | 0.801402 | 9.158708e-49 | -8.615850e-47 |
| Msa0151810 | Msa0684910 | 0.815153 | 1.069568e-51 | -8.615850e-47 |
| Msa0154720 | Msa0684910 | 0.800612 | 1.327887e-48 | -8.615850e-47 |
| Msa0160650 | Msa0684910 | 0.813586 | 2.374317e-51 | -8.615850e-47 |
| Msa0166580 | Msa0684910 | 0.837913 | 3.925720e-57 | -8.615850e-47 |
| Msa0170450 | Msa0684910 | 0.848513 | 5.844494e-60 | -8.615850e-47 |
| Msa0184030 | Msa0684910 | 0.831787 | 1.368977e-55 | -8.615850e-47 |
| Msa0198140 | Msa0684910 | 0.836076 | 1.156673e-56 | -8.615850e-47 |
| Msa0198220 | Msa0684910 | 0.830726 | 2.496510e-55 | -8.615850e-47 |
| Msa0201910 | Msa0684910 | 0.826720 | 2.323799e-54 | -8.615850e-47 |
| Msa0207220 | Msa0684910 | 0.802481 | 5.497393e-49 | -8.615850e-47 |
| Msa0208400 | Msa0684910 | 0.803448 | 3.468713e-49 | -8.615850e-47 |
| Msa0208560 | Msa0684910 | 0.804522 | 2.074782e-49 | -8.615850e-47 |
| Msa0211520 | Msa0684910 | 0.807244 | 5.556716e-50 | -8.615850e-47 |
| Msa0225370 | Msa0684910 | 0.808908 | 2.458213e-50 | -8.615850e-47 |
| Msa0365360 | Msa0684910 | 0.824614 | 7.336320e-54 | -8.615850e-47 |
| Msa0387180 | Msa0684910 | -0.820165 | 7.922177e-53 | -8.615850e-47 |
| Msa0408370 | Msa0684910 | 0.809823 | 1.564341e-50 | -8.615850e-47 |
| Msa0429100 | Msa0684910 | 0.807920 | 3.993987e-50 | -8.615850e-47 |
| Msa0451370 | Msa0684910 | 0.837307 | 5.616530e-57 | -8.615850e-47 |
| Msa0452010 | Msa0684910 | 0.825341 | 4.941421e-54 | -8.615850e-47 |
| Msa0457370 | Msa0684910 | 0.802257 | 6.113122e-49 | -8.615850e-47 |
| Msa0468050 | Msa0684910 | -0.850730 | 1.406027e-60 | -8.615850e-47 |
| Msa0244370 | Msa0684910 | 0.835528 | 1.592092e-56 | -8.615850e-47 |
| Msa0251140 | Msa0684910 | 0.823237 | 1.543330e-53 | -8.615850e-47 |
| Msa0251790 | Msa0684910 | 0.814109 | 1.821711e-51 | -8.615850e-47 |
| Msa0278340 | Msa0684910 | 0.826058 | 3.340468e-54 | -8.615850e-47 |
| Msa0282880 | Msa0684910 | 0.830036 | 3.681554e-55 | -8.615850e-47 |
| Msa0288280 | Msa0684910 | 0.811199 | 7.888532e-51 | -8.615850e-47 |
| Msa0290850 | Msa0684910 | 0.817908 | 2.583432e-52 | -8.615850e-47 |
| Msa0321180 | Msa0684910 | 0.834924 | 2.261500e-56 | -8.615850e-47 |
| Msa0321200 | Msa0684910 | 0.834157 | 3.525373e-56 | -8.615850e-47 |
| Msa0328840 | Msa0684910 | 0.852571 | 4.231170e-61 | -8.615850e-47 |
| Msa0330770 | Msa0684910 | 0.800645 | 1.307561e-48 | -8.615850e-47 |
| Msa0340530 | Msa0684910 | 0.819824 | 9.479375e-53 | -8.615850e-47 |
| Msa0343200 | Msa0684910 | 0.847612 | 1.036124e-59 | -8.615850e-47 |
| Msa0359230 | Msa0684910 | 0.827026 | 1.963294e-54 | -8.615850e-47 |
| Msa0360940 | Msa0684910 | 0.810431 | 1.156803e-50 | -8.615850e-47 |
| Msa0483160 | Msa0684910 | 0.824295 | 8.721899e-54 | -8.615850e-47 |
| Msa0501430 | Msa0684910 | 0.827188 | 1.796224e-54 | -8.615850e-47 |
| Msa0535020 | Msa0684910 | 0.807388 | 5.180502e-50 | -8.615850e-47 |
| Msa0535050 | Msa0684910 | 0.808836 | 2.545920e-50 | -8.615850e-47 |
| Msa0544930 | Msa0684910 | 0.815925 | 7.199695e-52 | -8.615850e-47 |
| Msa0549550 | Msa0684910 | 0.830299 | 3.175390e-55 | -8.615850e-47 |
| Msa0553570 | Msa0684910 | 0.843038 | 1.790769e-58 | -8.615850e-47 |
| Msa0554410 | Msa0684910 | 0.805937 | 1.048658e-49 | -8.615850e-47 |
| Msa0555510 | Msa0684910 | 0.839653 | 1.393355e-57 | -8.615850e-47 |
| Msa0555880 | Msa0684910 | 0.806171 | 9.363043e-50 | -8.615850e-47 |
| Msa0563230 | Msa0684910 | 0.850146 | 2.050359e-60 | -8.615850e-47 |
| Msa0575540 | Msa0684910 | 0.843591 | 1.275591e-58 | -8.615850e-47 |
| Msa0578890 | Msa0684910 | 0.815234 | 1.026004e-51 | -8.615850e-47 |
| Msa0584590 | Msa0684910 | 0.810402 | 1.173733e-50 | -8.615850e-47 |
| Msa0595240 | Msa0684910 | 0.808880 | 2.492360e-50 | -8.615850e-47 |
| Msa0597300 | Msa0684910 | 0.811222 | 7.797242e-51 | -8.615850e-47 |
| Msa0598680 | Msa0684910 | 0.807598 | 4.674878e-50 | -8.615850e-47 |
| Msa0599250 | Msa0684910 | 0.804248 | 2.365894e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684910 | MtrunA17_Chr4g0033171 | 97.826 | 322 | 7 | 0 | 1 | 322 | 404 | 725 | 0.0 | 657 |
| Msa0684910 | MtrunA17_Chr3g0118651 | 70.186 | 322 | 95 | 1 | 1 | 322 | 583 | 903 | 1.07e-171 | 499 |
| Msa0684910 | MtrunA17_Chr3g0118641 | 67.391 | 322 | 104 | 1 | 1 | 322 | 582 | 902 | 1.88e-161 | 473 |
| Msa0684910 | MtrunA17_Chr3g0118621 | 68.944 | 322 | 99 | 1 | 1 | 322 | 545 | 865 | 1.70e-151 | 446 |
| Msa0684910 | MtrunA17_Chr8g0377101 | 54.630 | 324 | 142 | 3 | 1 | 322 | 596 | 916 | 2.02e-123 | 375 |
| Msa0684910 | MtrunA17_Chr8g0344201 | 54.037 | 322 | 144 | 3 | 1 | 321 | 608 | 926 | 2.48e-120 | 367 |
| Msa0684910 | MtrunA17_Chr1g0191921 | 50.932 | 322 | 154 | 3 | 1 | 322 | 541 | 858 | 1.31e-105 | 327 |
| Msa0684910 | MtrunA17_Chr1g0205611 | 48.318 | 327 | 160 | 4 | 1 | 322 | 534 | 856 | 5.39e-105 | 326 |
| Msa0684910 | MtrunA17_Chr8g0343021 | 49.689 | 322 | 158 | 3 | 1 | 322 | 547 | 864 | 6.88e-103 | 320 |
| Msa0684910 | MtrunA17_Chr8g0342881 | 48.297 | 323 | 162 | 4 | 1 | 322 | 538 | 856 | 1.23e-101 | 317 |
| Msa0684910 | MtrunA17_Chr2g0329901 | 48.758 | 322 | 161 | 3 | 1 | 322 | 546 | 863 | 1.39e-101 | 317 |
| Msa0684910 | MtrunA17_Chr2g0329911 | 47.826 | 322 | 164 | 3 | 1 | 322 | 544 | 861 | 1.85e-101 | 317 |
| Msa0684910 | MtrunA17_Chr4g0047281 | 47.516 | 322 | 165 | 3 | 1 | 321 | 576 | 894 | 3.48e-101 | 317 |
| Msa0684910 | MtrunA17_Chr8g0343031 | 48.758 | 322 | 161 | 3 | 1 | 322 | 548 | 865 | 5.52e-101 | 315 |
| Msa0684910 | MtrunA17_Chr5g0406871 | 49.689 | 322 | 158 | 3 | 1 | 322 | 550 | 867 | 7.24e-101 | 315 |
| Msa0684910 | MtrunA17_Chr7g0272791 | 48.447 | 322 | 162 | 3 | 1 | 322 | 550 | 867 | 3.88e-100 | 313 |
| Msa0684910 | MtrunA17_Chr8g0342921 | 47.988 | 323 | 163 | 4 | 1 | 322 | 551 | 869 | 1.17e-99 | 312 |
| Msa0684910 | MtrunA17_Chr8g0342971 | 47.988 | 323 | 163 | 4 | 1 | 322 | 552 | 870 | 2.60e-99 | 311 |
| Msa0684910 | MtrunA17_Chr8g0342931 | 47.840 | 324 | 162 | 5 | 1 | 322 | 432 | 750 | 2.13e-98 | 306 |
| Msa0684910 | MtrunA17_Chr8g0342901 | 47.059 | 323 | 166 | 4 | 1 | 322 | 510 | 828 | 1.02e-97 | 306 |
| Msa0684910 | MtrunA17_Chr8g0342891 | 46.749 | 323 | 167 | 4 | 1 | 322 | 543 | 861 | 2.32e-97 | 306 |
| Msa0684910 | MtrunA17_Chr8g0343001 | 49.538 | 325 | 155 | 5 | 1 | 322 | 489 | 807 | 1.02e-96 | 303 |
| Msa0684910 | MtrunA17_Chr8g0344211 | 47.059 | 323 | 166 | 4 | 1 | 322 | 550 | 868 | 1.74e-96 | 303 |
| Msa0684910 | MtrunA17_Chr8g0342951 | 47.059 | 323 | 166 | 4 | 1 | 322 | 550 | 868 | 5.20e-96 | 302 |
| Msa0684910 | MtrunA17_Chr8g0344241 | 45.820 | 323 | 170 | 4 | 1 | 322 | 143 | 461 | 5.50e-96 | 291 |
| Msa0684910 | MtrunA17_Chr8g0343011 | 46.749 | 323 | 167 | 4 | 1 | 322 | 547 | 865 | 7.98e-96 | 302 |
| Msa0684910 | MtrunA17_Chr8g0342991 | 48.308 | 325 | 158 | 6 | 1 | 322 | 490 | 807 | 2.15e-93 | 294 |
| Msa0684910 | MtrunA17_Chr3g0120071 | 45.031 | 322 | 173 | 3 | 1 | 322 | 541 | 858 | 5.92e-92 | 291 |
| Msa0684910 | MtrunA17_Chr8g0342981 | 45.820 | 323 | 169 | 5 | 1 | 322 | 506 | 823 | 7.28e-90 | 285 |
| Msa0684910 | MtrunA17_Chr8g0338451 | 38.710 | 310 | 180 | 7 | 1 | 305 | 546 | 850 | 6.96e-68 | 227 |
| Msa0684910 | MtrunA17_Chr6g0471951 | 39.007 | 282 | 162 | 7 | 1 | 277 | 198 | 474 | 2.69e-63 | 208 |
| Msa0684910 | MtrunA17_Chr6g0468081 | 67.416 | 89 | 29 | 0 | 1 | 89 | 1 | 89 | 9.58e-38 | 130 |
| Msa0684910 | MtrunA17_Chr7g0218231 | 67.416 | 89 | 29 | 0 | 1 | 89 | 44 | 132 | 2.67e-37 | 130 |
| Msa0684910 | MtrunA17_Chr4g0047271 | 47.253 | 91 | 47 | 1 | 232 | 321 | 1 | 91 | 9.73e-19 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0684910 | AT3G45140.2 | 66.149 | 322 | 108 | 1 | 1 | 322 | 434 | 754 | 3.31e-157 | 458 |
| Msa0684910 | AT3G45140.1 | 66.149 | 322 | 108 | 1 | 1 | 322 | 576 | 896 | 3.66e-156 | 459 |
| Msa0684910 | AT1G72520.1 | 54.799 | 323 | 142 | 3 | 1 | 322 | 607 | 926 | 1.06e-121 | 371 |
| Msa0684910 | AT1G67560.1 | 52.778 | 324 | 148 | 3 | 1 | 322 | 597 | 917 | 5.88e-120 | 367 |
| Msa0684910 | AT1G17420.1 | 53.870 | 323 | 145 | 3 | 1 | 322 | 600 | 919 | 3.89e-116 | 357 |
| Msa0684910 | AT1G55020.1 | 50.932 | 322 | 155 | 2 | 1 | 322 | 541 | 859 | 2.06e-108 | 335 |
| Msa0684910 | AT3G22400.1 | 49.541 | 327 | 156 | 4 | 1 | 322 | 564 | 886 | 8.86e-106 | 329 |
Find 123 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCATTTCCCTTTATTTAA+TGG | 0.202353 | 4_4:-48525512 | Msa0684910:five_prime_UTR |
| CAAATGATGGTCTTATTCTT+TGG | 0.204203 | 4_4:-48524654 | Msa0684910:CDS |
| CATCATGCTGCGGTGAATTT+TGG | 0.226534 | 4_4:-48524418 | Msa0684910:CDS |
| AGGAGATTAGAAATAGATTT+AGG | 0.236902 | 4_4:+48523555 | None:intergenic |
| CTGCTAGTCCTCTATGGATT+AGG | 0.276392 | 4_4:+48524734 | None:intergenic |
| CTTGAAGGCACAACATTATA+TGG | 0.278755 | 4_4:-48525342 | Msa0684910:five_prime_UTR |
| CGTGCAATGGCCGGTCTATT+AGG | 0.281859 | 4_4:+48524370 | None:intergenic |
| ACTAAGAGAGAGAGTTGTTT+AGG | 0.294778 | 4_4:+48524814 | None:intergenic |
| TTTAGGCCATGTGGGGCATT+TGG | 0.297732 | 4_4:+48524703 | None:intergenic |
| GTAAAGACTTGCCTCCATTC+TGG | 0.301347 | 4_4:+48525234 | None:intergenic |
| AAATGAAACAATTCAATTAC+AGG | 0.303874 | 4_4:-48525439 | Msa0684910:five_prime_UTR |
| CATTCTGGCTTTCCGCCAAT+TGG | 0.310117 | 4_4:+48525249 | None:intergenic |
| ATCCGGACCAGGGGTAAAAT+TGG | 0.310833 | 4_4:+48523811 | None:intergenic |
| CTTGGCACTCAACTGGTGTT+TGG | 0.311025 | 4_4:-48525206 | Msa0684910:five_prime_UTR |
| AAATGATGGTCTTATTCTTT+GGG | 0.323159 | 4_4:-48524653 | Msa0684910:CDS |
| ACTCAACTGGTGTTTGGCTT+TGG | 0.325509 | 4_4:-48525200 | Msa0684910:five_prime_UTR |
| TATAATGTTAAATAAAGTTT+TGG | 0.327389 | 4_4:-48523904 | Msa0684910:three_prime_UTR |
| CACTTCAACAATGTCACTTC+CGG | 0.328499 | 4_4:+48524289 | None:intergenic |
| GGAAAAGTAATACTCATATT+TGG | 0.329739 | 4_4:+48523874 | None:intergenic |
| ACATCAGAGCCTGGTGTAAC+AGG | 0.346010 | 4_4:-48524013 | Msa0684910:CDS |
| CAACTGGTGTTTGGCTTTGG+AGG | 0.346039 | 4_4:-48525197 | Msa0684910:five_prime_UTR |
| TTTGGGATACTATCAAATCT+TGG | 0.346372 | 4_4:-48524636 | Msa0684910:CDS |
| TAGTTAGTACCATTAAATAA+AGG | 0.347601 | 4_4:+48525503 | None:intergenic |
| TCAAAAGCAGCTTTAATCAT+TGG | 0.348931 | 4_4:+48524151 | None:intergenic |
| CCTCTATGGATTAGGTCATT+TGG | 0.362847 | 4_4:+48524742 | None:intergenic |
| AAATAGTGACGACCATTGTT+TGG | 0.375344 | 4_4:-48524453 | Msa0684910:CDS |
| CTGTTTGTTGCTATAATGTA+AGG | 0.375603 | 4_4:+48524964 | None:intergenic |
| ACCATTGTTTGGATTACATC+GGG | 0.389981 | 4_4:-48524442 | Msa0684910:CDS |
| GTCATGCTAACTAGTGCGTC+TGG | 0.392699 | 4_4:-48525544 | Msa0684910:five_prime_UTR |
| GGAATGCTAATATGAAGTTC+AGG | 0.395431 | 4_4:-48524081 | Msa0684910:CDS |
| CTGGTCCGGATTTCGTATTC+CGG | 0.400344 | 4_4:-48523799 | Msa0684910:three_prime_UTR |
| TCTCAAATAGAGACACTATA+TGG | 0.403294 | 4_4:+48523980 | None:intergenic |
| TTGGGATACTATCAAATCTT+GGG | 0.406679 | 4_4:-48524635 | Msa0684910:CDS |
| ACACCTACTTGGCACTCAAC+TGG | 0.407754 | 4_4:-48525213 | Msa0684910:five_prime_UTR |
| GTTATGCTAAAATACTGTTC+CGG | 0.421590 | 4_4:+48523733 | None:intergenic |
| AGTTAGTACCATTAAATAAA+GGG | 0.425327 | 4_4:+48525504 | None:intergenic |
| AAAGTTTAAAGGGAGGTTGA+TGG | 0.425696 | 4_4:-48524128 | Msa0684910:CDS |
| ATAAGACCATCATTTGCATA+AGG | 0.432398 | 4_4:+48524661 | None:intergenic |
| GAGTTAGCTCGGCCGCCAAT+TGG | 0.451009 | 4_4:-48525264 | Msa0684910:five_prime_UTR |
| GGCAAGTCTTTACACCTACT+TGG | 0.451346 | 4_4:-48525224 | Msa0684910:five_prime_UTR |
| ACCAGTGACTAACAAGTTGA+TGG | 0.456313 | 4_4:+48525136 | None:intergenic |
| CATGTCCTTGCTCATGACTC+TGG | 0.457266 | 4_4:-48525162 | Msa0684910:five_prime_UTR |
| GTTGGCTTCAAAAGCTCATA+AGG | 0.458492 | 4_4:+48524034 | None:intergenic |
| AAAATACTAATAATTCATTC+CGG | 0.464290 | 4_4:+48523780 | None:intergenic |
| AACTAGTGCGTCTGGGACAC+TGG | 0.465058 | 4_4:-48525536 | Msa0684910:five_prime_UTR |
| GTCAAGTCATTCGCCGGATG+AGG | 0.467476 | 4_4:-48524215 | Msa0684910:CDS |
| TCTGGCTTTCCGCCAATTGG+CGG | 0.468670 | 4_4:+48525252 | None:intergenic |
| TCGCCGGATGAGGAATATCT+TGG | 0.470343 | 4_4:-48524205 | Msa0684910:CDS |
| ATGAAGTTCAGGAATAGAAA+TGG | 0.474519 | 4_4:-48524070 | Msa0684910:CDS |
| ATGAGCAAGGACATGAGCTT+TGG | 0.474874 | 4_4:+48525170 | None:intergenic |
| GGAAGTAATAGTTTGTAGAT+TGG | 0.475694 | 4_4:+48524922 | None:intergenic |
| AAATTGCCAATGCTTATCAT+AGG | 0.480247 | 4_4:+48524780 | None:intergenic |
| TCTCCAAGATATTCCTCATC+CGG | 0.481001 | 4_4:+48524202 | None:intergenic |
| GTTACACCAGGCTCTGATGT+TGG | 0.481878 | 4_4:+48524016 | None:intergenic |
| GAGCCTGGTGTAACAGGAAA+AGG | 0.483878 | 4_4:-48524007 | Msa0684910:CDS |
| GAGAAACGATTGAGCCGGCT+TGG | 0.485512 | 4_4:-48524183 | Msa0684910:CDS |
| TAAGACCATCATTTGCATAA+GGG | 0.494543 | 4_4:+48524662 | None:intergenic |
| GGGAGGTTGATGGAGCTTGA+AGG | 0.499581 | 4_4:-48524118 | Msa0684910:CDS |
| CGGAATACGAAATCCGGACC+AGG | 0.500562 | 4_4:+48523800 | None:intergenic |
| ACGGTCTCAATGTGCTATCA+TGG | 0.506109 | 4_4:+48525295 | None:intergenic |
| TTCAGGAATAGAAATGGTGC+TGG | 0.509228 | 4_4:-48524064 | Msa0684910:CDS |
| AAGACCCTTCGGACAGCGAA+TGG | 0.509994 | 4_4:-48524330 | Msa0684910:CDS |
| TTGACTCATTGTTATAGTAG+TGG | 0.511572 | 4_4:+48524596 | None:intergenic |
| AAAATAGGGCGCGCGAGGAA+AGG | 0.512815 | 4_4:+48523842 | None:intergenic |
| ATGTTGTTTCGTGCAATGGC+CGG | 0.516262 | 4_4:+48524361 | None:intergenic |
| TATGGATTAGGTCATTTGGA+AGG | 0.517217 | 4_4:+48524746 | None:intergenic |
| TCATTCCGGAATACGAAATC+CGG | 0.518352 | 4_4:+48523794 | None:intergenic |
| TTGAAGCCAACATCAGAGCC+TGG | 0.522494 | 4_4:-48524022 | Msa0684910:CDS |
| AGGCATGTTGTTTCGTGCAA+TGG | 0.525554 | 4_4:+48524357 | None:intergenic |
| AGACCCTTCGGACAGCGAAT+GGG | 0.527739 | 4_4:-48524329 | Msa0684910:CDS |
| ATTGGTTCCTCTTGCCAAGC+CGG | 0.531139 | 4_4:+48524169 | None:intergenic |
| ACCATCAACTTGTTAGTCAC+TGG | 0.535909 | 4_4:-48525137 | Msa0684910:intron |
| GCGCGAGGAAAGGCATAGGG+TGG | 0.536026 | 4_4:+48523852 | None:intergenic |
| GCACAACATTATATGGATCA+AGG | 0.536766 | 4_4:-48525335 | Msa0684910:five_prime_UTR |
| ATGGATTAGGTCATTTGGAA+GGG | 0.539773 | 4_4:+48524747 | None:intergenic |
| TTAGCTCGGCCGCCAATTGG+CGG | 0.540332 | 4_4:-48525261 | Msa0684910:five_prime_UTR |
| GATTACCCTTATGCAAATGA+TGG | 0.542032 | 4_4:-48524667 | Msa0684910:CDS |
| CTGTCCGAAGGGTCTTCTGT+AGG | 0.547242 | 4_4:+48524337 | None:intergenic |
| GAGGAAGTCAGAAAACTTGA+AGG | 0.554158 | 4_4:-48525357 | Msa0684910:five_prime_UTR |
| CAATAGCCTATGATAAGCAT+TGG | 0.560181 | 4_4:-48524786 | Msa0684910:CDS |
| TCTTGGAGAAACGATTGAGC+CGG | 0.561911 | 4_4:-48524188 | Msa0684910:CDS |
| GAAGCACTTATAAATGCAGA+TGG | 0.564500 | 4_4:-48524859 | Msa0684910:CDS |
| TCCATTGTGTACCTAAAATG+TGG | 0.564722 | 4_4:+48524901 | None:intergenic |
| GGCGCGCGAGGAAAGGCATA+GGG | 0.565662 | 4_4:+48523849 | None:intergenic |
| CGTTGGCGATCGAGTTAGCT+CGG | 0.566042 | 4_4:-48525275 | Msa0684910:five_prime_UTR |
| GTCATAGCTTGAATTTGCGA+AGG | 0.572643 | 4_4:+48524262 | None:intergenic |
| AGTTCCCATTCGCTGTCCGA+AGG | 0.574184 | 4_4:+48524325 | None:intergenic |
| CCAAATGACCTAATCCATAG+AGG | 0.574379 | 4_4:-48524742 | Msa0684910:CDS |
| GACCATTGTTTGGATTACAT+CGG | 0.574726 | 4_4:-48524443 | Msa0684910:CDS |
| TTTCTGACTTCCTCGACCAA+CGG | 0.578983 | 4_4:+48525366 | None:intergenic |
| CAATTGGCGGAAAGCCAGAA+TGG | 0.580426 | 4_4:-48525248 | Msa0684910:five_prime_UTR |
| TCATGCTAACTAGTGCGTCT+GGG | 0.582582 | 4_4:-48525543 | Msa0684910:five_prime_UTR |
| ACACCAGTTGAGTGCCAAGT+AGG | 0.585215 | 4_4:+48525210 | None:intergenic |
| GGGCGCGCGAGGAAAGGCAT+AGG | 0.586536 | 4_4:+48523848 | None:intergenic |
| GATTGAGCCGGCTTGGCAAG+AGG | 0.589180 | 4_4:-48524176 | Msa0684910:CDS |
| CGCGAGGAAAGGCATAGGGT+GGG | 0.593162 | 4_4:+48523853 | None:intergenic |
| GTTCCCATTCGCTGTCCGAA+GGG | 0.597179 | 4_4:+48524326 | None:intergenic |
| TTTGGTCAGTATACTTACGC+TGG | 0.598381 | 4_4:-48524400 | Msa0684910:CDS |
| TGCTATAATGTAAGGCTCTG+TGG | 0.599707 | 4_4:+48524972 | None:intergenic |
| CATGCCTACAGAAGACCCTT+CGG | 0.600883 | 4_4:-48524341 | Msa0684910:CDS |
| TCTATTTGAGACACATGTTG+TGG | 0.603437 | 4_4:-48523968 | Msa0684910:exon |
| TGGTATGAGATTAGAAATGT+TGG | 0.603834 | 4_4:-48524538 | Msa0684910:CDS |
| TTGAAGGTATAATAGATGAG+AGG | 0.604595 | 4_4:-48524102 | Msa0684910:CDS |
| TTCGCAAATTCAAGCTATGA+CGG | 0.607036 | 4_4:-48524260 | Msa0684910:CDS |
| CGAGCTAACTCGATCGCCAA+CGG | 0.607861 | 4_4:+48525276 | None:intergenic |
| TGATAGCACATTGAGACCGT+TGG | 0.613528 | 4_4:-48525292 | Msa0684910:five_prime_UTR |
| TCATAGCTTGAATTTGCGAA+GGG | 0.614455 | 4_4:+48524263 | None:intergenic |
| GAGATTAGAAATGTTGGTCA+CGG | 0.614978 | 4_4:-48524532 | Msa0684910:CDS |
| CGGATAAAGAATTACAAGCA+TGG | 0.616013 | 4_4:-48524561 | Msa0684910:CDS |
| AAAGATCCAAATGCCCCACA+TGG | 0.624536 | 4_4:-48524709 | Msa0684910:CDS |
| CCCCGATGTAATCCAAACAA+TGG | 0.629499 | 4_4:+48524441 | None:intergenic |
| TGAGTCAAGAACTGTTGAGT+CGG | 0.633371 | 4_4:-48524581 | Msa0684910:CDS |
| TACATCGGGGCATCATGCTG+CGG | 0.637437 | 4_4:-48524428 | Msa0684910:CDS |
| GGAATACGAAATCCGGACCA+GGG | 0.642284 | 4_4:+48523801 | None:intergenic |
| CCATTGTTTGGATTACATCG+GGG | 0.657108 | 4_4:-48524441 | Msa0684910:CDS |
| TTGGCGGAAAGCCAGAATGG+AGG | 0.667120 | 4_4:-48525245 | Msa0684910:five_prime_UTR |
| GAATACGAAATCCGGACCAG+GGG | 0.671307 | 4_4:+48523802 | None:intergenic |
| GGTAGCCAGAGTCATGAGCA+AGG | 0.680144 | 4_4:+48525157 | None:intergenic |
| GTGACAAGAAAGACGAACCA+TGG | 0.691218 | 4_4:-48524510 | Msa0684910:CDS |
| ACTTGACAAAATATCCAACA+CGG | 0.724220 | 4_4:+48524231 | None:intergenic |
| ATAAAGAATTACAAGCATGG+TGG | 0.729305 | 4_4:-48524558 | Msa0684910:CDS |
| ACAAGAAAGACGAACCATGG+TGG | 0.729803 | 4_4:-48524507 | Msa0684910:CDS |
| TATGACGGTGATGACCGTGT+TGG | 0.742214 | 4_4:-48524245 | Msa0684910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATGTTAAATAAAGTTT+TGG | - | chr4_4:48525298-48525317 | Msa0684910:five_prime_UTR | 10.0% |
| !!! | TATAATGTTAAATAAAGTTT+TGG | - | chr4_4:48525298-48525317 | Msa0684910:five_prime_UTR | 10.0% |
| !!! | ATGATTTTATTTTTTTGACT+TGG | + | chr4_4:48524155-48524174 | None:intergenic | 15.0% |
| !! | AATTGGAAGAAAAAAAAATA+GGG | + | chr4_4:48525377-48525396 | None:intergenic | 15.0% |
| !! | AAATTGGAAGAAAAAAAAAT+AGG | + | chr4_4:48525378-48525397 | None:intergenic | 15.0% |
| !! | AAAATACTAATAATTCATTC+CGG | + | chr4_4:48525425-48525444 | None:intergenic | 15.0% |
| !!! | ATGATTTTATTTTTTTGACT+TGG | + | chr4_4:48524155-48524174 | None:intergenic | 15.0% |
| !! | AATTGGAAGAAAAAAAAATA+GGG | + | chr4_4:48525377-48525396 | None:intergenic | 15.0% |
| !! | AAATTGGAAGAAAAAAAAAT+AGG | + | chr4_4:48525378-48525397 | None:intergenic | 15.0% |
| !! | AAAATACTAATAATTCATTC+CGG | + | chr4_4:48525425-48525444 | None:intergenic | 15.0% |
| !! | AGTTAGTACCATTAAATAAA+GGG | + | chr4_4:48523701-48523720 | None:intergenic | 20.0% |
| !! | TAGTTAGTACCATTAAATAA+AGG | + | chr4_4:48523702-48523721 | None:intergenic | 20.0% |
| !! | AAATGAAACAATTCAATTAC+AGG | - | chr4_4:48523763-48523782 | Msa0684910:three_prime_UTR | 20.0% |
| !! | ACAAAAGTGAAAATCAATTA+AGG | + | chr4_4:48524189-48524208 | None:intergenic | 20.0% |
| !!! | AATCTTCTATTGTTAGTTTT+AGG | + | chr4_4:48524519-48524538 | None:intergenic | 20.0% |
| !!! | TCATCATTTGTTTTCAAATT+AGG | + | chr4_4:48524721-48524740 | None:intergenic | 20.0% |
| !! | AGTTAGTACCATTAAATAAA+GGG | + | chr4_4:48523701-48523720 | None:intergenic | 20.0% |
| !! | TAGTTAGTACCATTAAATAA+AGG | + | chr4_4:48523702-48523721 | None:intergenic | 20.0% |
| !! | AAATGAAACAATTCAATTAC+AGG | - | chr4_4:48523763-48523782 | Msa0684910:three_prime_UTR | 20.0% |
| !! | ACAAAAGTGAAAATCAATTA+AGG | + | chr4_4:48524189-48524208 | None:intergenic | 20.0% |
| !!! | AATCTTCTATTGTTAGTTTT+AGG | + | chr4_4:48524519-48524538 | None:intergenic | 20.0% |
| !!! | TCATCATTTGTTTTCAAATT+AGG | + | chr4_4:48524721-48524740 | None:intergenic | 20.0% |
| !!! | TCACCTTCAGTTTTTATTTA+AGG | - | chr4_4:48523635-48523654 | Msa0684910:three_prime_UTR | 25.0% |
| !!! | CACCTTCAGTTTTTATTTAA+GGG | - | chr4_4:48523636-48523655 | Msa0684910:three_prime_UTR | 25.0% |
| !! | TAGCATTTCCCTTTATTTAA+TGG | - | chr4_4:48523690-48523709 | Msa0684910:three_prime_UTR | 25.0% |
| !!! | ATTGATTTTCACTTTTGTTC+AGG | - | chr4_4:48524191-48524210 | Msa0684910:CDS | 25.0% |
| !! | AACTATTACTTCCACATTTT+AGG | - | chr4_4:48524290-48524309 | Msa0684910:CDS | 25.0% |
| !!! | AAATGATGGTCTTATTCTTT+GGG | - | chr4_4:48524549-48524568 | Msa0684910:CDS | 25.0% |
| !!! | CTGCTTTTGAAAAGTTTAAA+GGG | - | chr4_4:48525064-48525083 | Msa0684910:intron | 25.0% |
| ! | GGAAAAGTAATACTCATATT+TGG | + | chr4_4:48525331-48525350 | None:intergenic | 25.0% |
| !!! | TAGTATTTTTCAGATGATTC+CGG | - | chr4_4:48525436-48525455 | Msa0684910:five_prime_UTR | 25.0% |
| !!! | TCACCTTCAGTTTTTATTTA+AGG | - | chr4_4:48523635-48523654 | Msa0684910:three_prime_UTR | 25.0% |
| !!! | CACCTTCAGTTTTTATTTAA+GGG | - | chr4_4:48523636-48523655 | Msa0684910:three_prime_UTR | 25.0% |
| !! | TAGCATTTCCCTTTATTTAA+TGG | - | chr4_4:48523690-48523709 | Msa0684910:three_prime_UTR | 25.0% |
| !!! | ATTGATTTTCACTTTTGTTC+AGG | - | chr4_4:48524191-48524210 | Msa0684910:CDS | 25.0% |
| !! | AACTATTACTTCCACATTTT+AGG | - | chr4_4:48524290-48524309 | Msa0684910:CDS | 25.0% |
| !!! | AAATGATGGTCTTATTCTTT+GGG | - | chr4_4:48524549-48524568 | Msa0684910:CDS | 25.0% |
| !!! | CTGCTTTTGAAAAGTTTAAA+GGG | - | chr4_4:48525064-48525083 | Msa0684910:intron | 25.0% |
| ! | GGAAAAGTAATACTCATATT+TGG | + | chr4_4:48525331-48525350 | None:intergenic | 25.0% |
| !!! | TAGTATTTTTCAGATGATTC+CGG | - | chr4_4:48525436-48525455 | Msa0684910:five_prime_UTR | 25.0% |
| GACCCTTAAATAAAAACTGA+AGG | + | chr4_4:48523641-48523660 | None:intergenic | 30.0% | |
| ! | GTACAACTTCTTCTGTTTTA+TGG | + | chr4_4:48523789-48523808 | None:intergenic | 30.0% |
| AGAAAAAATCGTAGTAGTCT+AGG | + | chr4_4:48523814-48523833 | None:intergenic | 30.0% | |
| TATGAAAGAATAAACCGTCT+TGG | - | chr4_4:48524088-48524107 | Msa0684910:CDS | 30.0% | |
| ! | CTGTTTGTTGCTATAATGTA+AGG | + | chr4_4:48524241-48524260 | None:intergenic | 30.0% |
| ! | GGAAGTAATAGTTTGTAGAT+TGG | + | chr4_4:48524283-48524302 | None:intergenic | 30.0% |
| AAATTGCCAATGCTTATCAT+AGG | + | chr4_4:48524425-48524444 | None:intergenic | 30.0% | |
| TAAGACCATCATTTGCATAA+GGG | + | chr4_4:48524543-48524562 | None:intergenic | 30.0% | |
| ATAAGACCATCATTTGCATA+AGG | + | chr4_4:48524544-48524563 | None:intergenic | 30.0% | |
| !! | CAAATGATGGTCTTATTCTT+TGG | - | chr4_4:48524548-48524567 | Msa0684910:CDS | 30.0% |
| ! | TTTGGGATACTATCAAATCT+TGG | - | chr4_4:48524566-48524585 | Msa0684910:CDS | 30.0% |
| TTGGGATACTATCAAATCTT+GGG | - | chr4_4:48524567-48524586 | Msa0684910:CDS | 30.0% | |
| TTGACTCATTGTTATAGTAG+TGG | + | chr4_4:48524609-48524628 | None:intergenic | 30.0% | |
| ATAAAGAATTACAAGCATGG+TGG | - | chr4_4:48524644-48524663 | Msa0684910:CDS | 30.0% | |
| TGGTATGAGATTAGAAATGT+TGG | - | chr4_4:48524664-48524683 | Msa0684910:CDS | 30.0% | |
| ! | TGGATATTTTCCTAATAGAC+CGG | - | chr4_4:48524822-48524841 | Msa0684910:CDS | 30.0% |
| ACTTGACAAAATATCCAACA+CGG | + | chr4_4:48524974-48524993 | None:intergenic | 30.0% | |
| ! | TCAAAAGCAGCTTTAATCAT+TGG | + | chr4_4:48525054-48525073 | None:intergenic | 30.0% |
| !!! | GCTGCTTTTGAAAAGTTTAA+AGG | - | chr4_4:48525063-48525082 | Msa0684910:intron | 30.0% |
| !! | CTTTTGAAAAGTTTAAAGGG+AGG | - | chr4_4:48525067-48525086 | Msa0684910:intron | 30.0% |
| ! | TTGAAGGTATAATAGATGAG+AGG | - | chr4_4:48525100-48525119 | Msa0684910:intron | 30.0% |
| ATGAAGTTCAGGAATAGAAA+TGG | - | chr4_4:48525132-48525151 | Msa0684910:intron | 30.0% | |
| TCTCAAATAGAGACACTATA+TGG | + | chr4_4:48525225-48525244 | None:intergenic | 30.0% | |
| !!! | TGATTCCGGATTTTAAAATC+CGG | - | chr4_4:48525450-48525469 | Msa0684910:five_prime_UTR | 30.0% |
| GTTATGCTAAAATACTGTTC+CGG | + | chr4_4:48525472-48525491 | None:intergenic | 30.0% | |
| GACCCTTAAATAAAAACTGA+AGG | + | chr4_4:48523641-48523660 | None:intergenic | 30.0% | |
| ! | GTACAACTTCTTCTGTTTTA+TGG | + | chr4_4:48523789-48523808 | None:intergenic | 30.0% |
| AGAAAAAATCGTAGTAGTCT+AGG | + | chr4_4:48523814-48523833 | None:intergenic | 30.0% | |
| TATGAAAGAATAAACCGTCT+TGG | - | chr4_4:48524088-48524107 | Msa0684910:CDS | 30.0% | |
| ! | CTGTTTGTTGCTATAATGTA+AGG | + | chr4_4:48524241-48524260 | None:intergenic | 30.0% |
| ! | GGAAGTAATAGTTTGTAGAT+TGG | + | chr4_4:48524283-48524302 | None:intergenic | 30.0% |
| AAATTGCCAATGCTTATCAT+AGG | + | chr4_4:48524425-48524444 | None:intergenic | 30.0% | |
| TAAGACCATCATTTGCATAA+GGG | + | chr4_4:48524543-48524562 | None:intergenic | 30.0% | |
| ATAAGACCATCATTTGCATA+AGG | + | chr4_4:48524544-48524563 | None:intergenic | 30.0% | |
| !! | CAAATGATGGTCTTATTCTT+TGG | - | chr4_4:48524548-48524567 | Msa0684910:CDS | 30.0% |
| ! | TTTGGGATACTATCAAATCT+TGG | - | chr4_4:48524566-48524585 | Msa0684910:CDS | 30.0% |
| TTGGGATACTATCAAATCTT+GGG | - | chr4_4:48524567-48524586 | Msa0684910:CDS | 30.0% | |
| TTGACTCATTGTTATAGTAG+TGG | + | chr4_4:48524609-48524628 | None:intergenic | 30.0% | |
| ATAAAGAATTACAAGCATGG+TGG | - | chr4_4:48524644-48524663 | Msa0684910:CDS | 30.0% | |
| TGGTATGAGATTAGAAATGT+TGG | - | chr4_4:48524664-48524683 | Msa0684910:CDS | 30.0% | |
| ! | TGGATATTTTCCTAATAGAC+CGG | - | chr4_4:48524822-48524841 | Msa0684910:CDS | 30.0% |
| ACTTGACAAAATATCCAACA+CGG | + | chr4_4:48524974-48524993 | None:intergenic | 30.0% | |
| ! | TCAAAAGCAGCTTTAATCAT+TGG | + | chr4_4:48525054-48525073 | None:intergenic | 30.0% |
| !!! | GCTGCTTTTGAAAAGTTTAA+AGG | - | chr4_4:48525063-48525082 | Msa0684910:intron | 30.0% |
| !! | CTTTTGAAAAGTTTAAAGGG+AGG | - | chr4_4:48525067-48525086 | Msa0684910:intron | 30.0% |
| ! | TTGAAGGTATAATAGATGAG+AGG | - | chr4_4:48525100-48525119 | Msa0684910:intron | 30.0% |
| ATGAAGTTCAGGAATAGAAA+TGG | - | chr4_4:48525132-48525151 | Msa0684910:intron | 30.0% | |
| TCTCAAATAGAGACACTATA+TGG | + | chr4_4:48525225-48525244 | None:intergenic | 30.0% | |
| !!! | TGATTCCGGATTTTAAAATC+CGG | - | chr4_4:48525450-48525469 | Msa0684910:five_prime_UTR | 30.0% |
| GTTATGCTAAAATACTGTTC+CGG | + | chr4_4:48525472-48525491 | None:intergenic | 30.0% | |
| AGGTGAGAAAAACACAAGAA+GGG | + | chr4_4:48523621-48523640 | None:intergenic | 35.0% | |
| AAGGTGAGAAAAACACAAGA+AGG | + | chr4_4:48523622-48523641 | None:intergenic | 35.0% | |
| ! | CTTGAAGGCACAACATTATA+TGG | - | chr4_4:48523860-48523879 | Msa0684910:three_prime_UTR | 35.0% |
| GCACAACATTATATGGATCA+AGG | - | chr4_4:48523867-48523886 | Msa0684910:three_prime_UTR | 35.0% | |
| !! | TCCACATTTTAGGTACACAA+TGG | - | chr4_4:48524300-48524319 | Msa0684910:CDS | 35.0% |
| TCCATTGTGTACCTAAAATG+TGG | + | chr4_4:48524304-48524323 | None:intergenic | 35.0% | |
| ! | GAAGCACTTATAAATGCAGA+TGG | - | chr4_4:48524343-48524362 | Msa0684910:CDS | 35.0% |
| ACTAAGAGAGAGAGTTGTTT+AGG | + | chr4_4:48524391-48524410 | None:intergenic | 35.0% | |
| CAATAGCCTATGATAAGCAT+TGG | - | chr4_4:48524416-48524435 | Msa0684910:CDS | 35.0% | |
| !! | ATGGATTAGGTCATTTGGAA+GGG | + | chr4_4:48524458-48524477 | None:intergenic | 35.0% |
| !! | TATGGATTAGGTCATTTGGA+AGG | + | chr4_4:48524459-48524478 | None:intergenic | 35.0% |
| !!! | TTGTTAGTTTTAGGCCATGT+GGG | + | chr4_4:48524510-48524529 | None:intergenic | 35.0% |
| !!! | ATTGTTAGTTTTAGGCCATG+TGG | + | chr4_4:48524511-48524530 | None:intergenic | 35.0% |
| GATTACCCTTATGCAAATGA+TGG | - | chr4_4:48524535-48524554 | Msa0684910:CDS | 35.0% | |
| CGGATAAAGAATTACAAGCA+TGG | - | chr4_4:48524641-48524660 | Msa0684910:CDS | 35.0% | |
| GAGATTAGAAATGTTGGTCA+CGG | - | chr4_4:48524670-48524689 | Msa0684910:CDS | 35.0% | |
| AAATAGTGACGACCATTGTT+TGG | - | chr4_4:48524749-48524768 | Msa0684910:CDS | 35.0% | |
| GACCATTGTTTGGATTACAT+CGG | - | chr4_4:48524759-48524778 | Msa0684910:CDS | 35.0% | |
| ACCATTGTTTGGATTACATC+GGG | - | chr4_4:48524760-48524779 | Msa0684910:CDS | 35.0% | |
| !! | GGAACTTTTCTTTGAGAAAC+CGG | - | chr4_4:48524894-48524913 | Msa0684910:CDS | 35.0% |
| TCATAGCTTGAATTTGCGAA+GGG | + | chr4_4:48524942-48524961 | None:intergenic | 35.0% | |
| TTCGCAAATTCAAGCTATGA+CGG | - | chr4_4:48524942-48524961 | Msa0684910:exon | 35.0% | |
| ! | TATTTTGTCAAGTCATTCGC+CGG | - | chr4_4:48524981-48525000 | Msa0684910:five_prime_UTR | 35.0% |
| AAAGTTTAAAGGGAGGTTGA+TGG | - | chr4_4:48525074-48525093 | Msa0684910:intron | 35.0% | |
| GGAATGCTAATATGAAGTTC+AGG | - | chr4_4:48525121-48525140 | Msa0684910:intron | 35.0% | |
| ! | TCTATTTGAGACACATGTTG+TGG | - | chr4_4:48525234-48525253 | Msa0684910:five_prime_UTR | 35.0% |
| ! | TTTTCTTCCAATTTTACCCC+TGG | - | chr4_4:48525384-48525403 | Msa0684910:five_prime_UTR | 35.0% |
| !!! | CTGTTCCGGATTTTAAAATC+CGG | + | chr4_4:48525458-48525477 | None:intergenic | 35.0% |
| AGGTGAGAAAAACACAAGAA+GGG | + | chr4_4:48523621-48523640 | None:intergenic | 35.0% | |
| AAGGTGAGAAAAACACAAGA+AGG | + | chr4_4:48523622-48523641 | None:intergenic | 35.0% | |
| ! | CTTGAAGGCACAACATTATA+TGG | - | chr4_4:48523860-48523879 | Msa0684910:three_prime_UTR | 35.0% |
| GCACAACATTATATGGATCA+AGG | - | chr4_4:48523867-48523886 | Msa0684910:three_prime_UTR | 35.0% | |
| !! | TCCACATTTTAGGTACACAA+TGG | - | chr4_4:48524300-48524319 | Msa0684910:CDS | 35.0% |
| TCCATTGTGTACCTAAAATG+TGG | + | chr4_4:48524304-48524323 | None:intergenic | 35.0% | |
| ! | GAAGCACTTATAAATGCAGA+TGG | - | chr4_4:48524343-48524362 | Msa0684910:CDS | 35.0% |
| ACTAAGAGAGAGAGTTGTTT+AGG | + | chr4_4:48524391-48524410 | None:intergenic | 35.0% | |
| CAATAGCCTATGATAAGCAT+TGG | - | chr4_4:48524416-48524435 | Msa0684910:CDS | 35.0% | |
| !! | ATGGATTAGGTCATTTGGAA+GGG | + | chr4_4:48524458-48524477 | None:intergenic | 35.0% |
| !! | TATGGATTAGGTCATTTGGA+AGG | + | chr4_4:48524459-48524478 | None:intergenic | 35.0% |
| !!! | TTGTTAGTTTTAGGCCATGT+GGG | + | chr4_4:48524510-48524529 | None:intergenic | 35.0% |
| !!! | ATTGTTAGTTTTAGGCCATG+TGG | + | chr4_4:48524511-48524530 | None:intergenic | 35.0% |
| GATTACCCTTATGCAAATGA+TGG | - | chr4_4:48524535-48524554 | Msa0684910:CDS | 35.0% | |
| CGGATAAAGAATTACAAGCA+TGG | - | chr4_4:48524641-48524660 | Msa0684910:CDS | 35.0% | |
| GAGATTAGAAATGTTGGTCA+CGG | - | chr4_4:48524670-48524689 | Msa0684910:CDS | 35.0% | |
| AAATAGTGACGACCATTGTT+TGG | - | chr4_4:48524749-48524768 | Msa0684910:CDS | 35.0% | |
| GACCATTGTTTGGATTACAT+CGG | - | chr4_4:48524759-48524778 | Msa0684910:CDS | 35.0% | |
| ACCATTGTTTGGATTACATC+GGG | - | chr4_4:48524760-48524779 | Msa0684910:CDS | 35.0% | |
| !! | GGAACTTTTCTTTGAGAAAC+CGG | - | chr4_4:48524894-48524913 | Msa0684910:CDS | 35.0% |
| TCATAGCTTGAATTTGCGAA+GGG | + | chr4_4:48524942-48524961 | None:intergenic | 35.0% | |
| TTCGCAAATTCAAGCTATGA+CGG | - | chr4_4:48524942-48524961 | Msa0684910:exon | 35.0% | |
| ! | TATTTTGTCAAGTCATTCGC+CGG | - | chr4_4:48524981-48525000 | Msa0684910:five_prime_UTR | 35.0% |
| AAAGTTTAAAGGGAGGTTGA+TGG | - | chr4_4:48525074-48525093 | Msa0684910:intron | 35.0% | |
| GGAATGCTAATATGAAGTTC+AGG | - | chr4_4:48525121-48525140 | Msa0684910:intron | 35.0% | |
| ! | TCTATTTGAGACACATGTTG+TGG | - | chr4_4:48525234-48525253 | Msa0684910:five_prime_UTR | 35.0% |
| ! | TTTTCTTCCAATTTTACCCC+TGG | - | chr4_4:48525384-48525403 | Msa0684910:five_prime_UTR | 35.0% |
| !!! | CTGTTCCGGATTTTAAAATC+CGG | + | chr4_4:48525458-48525477 | None:intergenic | 35.0% |
| TGAGAAAAACACAAGAAGGG+GGG | + | chr4_4:48523618-48523637 | None:intergenic | 40.0% | |
| GTGAGAAAAACACAAGAAGG+GGG | + | chr4_4:48523619-48523638 | None:intergenic | 40.0% | |
| GGTGAGAAAAACACAAGAAG+GGG | + | chr4_4:48523620-48523639 | None:intergenic | 40.0% | |
| !!! | CTACGATTTTTTCTTGCCGT+TGG | - | chr4_4:48523820-48523839 | Msa0684910:three_prime_UTR | 40.0% |
| GAGGAAGTCAGAAAACTTGA+AGG | - | chr4_4:48523845-48523864 | Msa0684910:three_prime_UTR | 40.0% | |
| !! | ACCATCAACTTGTTAGTCAC+TGG | - | chr4_4:48524065-48524084 | Msa0684910:CDS | 40.0% |
| ! | ACCAGTGACTAACAAGTTGA+TGG | + | chr4_4:48524069-48524088 | None:intergenic | 40.0% |
| TATCGAATCGAAAGCCAAGA+CGG | + | chr4_4:48524105-48524124 | None:intergenic | 40.0% | |
| TGCTATAATGTAAGGCTCTG+TGG | + | chr4_4:48524233-48524252 | None:intergenic | 40.0% | |
| !! | CCTCTATGGATTAGGTCATT+TGG | + | chr4_4:48524463-48524482 | None:intergenic | 40.0% |
| CCAAATGACCTAATCCATAG+AGG | - | chr4_4:48524460-48524479 | Msa0684910:CDS | 40.0% | |
| ! | CTTTTTCTGCTAGTCCTCTA+TGG | + | chr4_4:48524477-48524496 | None:intergenic | 40.0% |
| !!! | TGTTAGTTTTAGGCCATGTG+GGG | + | chr4_4:48524509-48524528 | None:intergenic | 40.0% |
| TGAGTCAAGAACTGTTGAGT+CGG | - | chr4_4:48524621-48524640 | Msa0684910:CDS | 40.0% | |
| ! | GTTTTCAAATTAGGCCACCA+TGG | + | chr4_4:48524712-48524731 | None:intergenic | 40.0% |
| CCATTGTTTGGATTACATCG+GGG | - | chr4_4:48524761-48524780 | Msa0684910:CDS | 40.0% | |
| TTTGGTCAGTATACTTACGC+TGG | - | chr4_4:48524802-48524821 | Msa0684910:CDS | 40.0% | |
| ! | CACTTCAACAATGTCACTTC+CGG | + | chr4_4:48524916-48524935 | None:intergenic | 40.0% |
| GTCATAGCTTGAATTTGCGA+AGG | + | chr4_4:48524943-48524962 | None:intergenic | 40.0% | |
| TCTCCAAGATATTCCTCATC+CGG | + | chr4_4:48525003-48525022 | None:intergenic | 40.0% | |
| TTCAGGAATAGAAATGGTGC+TGG | - | chr4_4:48525138-48525157 | Msa0684910:five_prime_UTR | 40.0% | |
| ! | GTTGGCTTCAAAAGCTCATA+AGG | + | chr4_4:48525171-48525190 | None:intergenic | 40.0% |
| TCATTCCGGAATACGAAATC+CGG | + | chr4_4:48525411-48525430 | None:intergenic | 40.0% | |
| TGAGAAAAACACAAGAAGGG+GGG | + | chr4_4:48523618-48523637 | None:intergenic | 40.0% | |
| GTGAGAAAAACACAAGAAGG+GGG | + | chr4_4:48523619-48523638 | None:intergenic | 40.0% | |
| GGTGAGAAAAACACAAGAAG+GGG | + | chr4_4:48523620-48523639 | None:intergenic | 40.0% | |
| !!! | CTACGATTTTTTCTTGCCGT+TGG | - | chr4_4:48523820-48523839 | Msa0684910:three_prime_UTR | 40.0% |
| GAGGAAGTCAGAAAACTTGA+AGG | - | chr4_4:48523845-48523864 | Msa0684910:three_prime_UTR | 40.0% | |
| !! | ACCATCAACTTGTTAGTCAC+TGG | - | chr4_4:48524065-48524084 | Msa0684910:CDS | 40.0% |
| ! | ACCAGTGACTAACAAGTTGA+TGG | + | chr4_4:48524069-48524088 | None:intergenic | 40.0% |
| TATCGAATCGAAAGCCAAGA+CGG | + | chr4_4:48524105-48524124 | None:intergenic | 40.0% | |
| TGCTATAATGTAAGGCTCTG+TGG | + | chr4_4:48524233-48524252 | None:intergenic | 40.0% | |
| !! | CCTCTATGGATTAGGTCATT+TGG | + | chr4_4:48524463-48524482 | None:intergenic | 40.0% |
| CCAAATGACCTAATCCATAG+AGG | - | chr4_4:48524460-48524479 | Msa0684910:CDS | 40.0% | |
| ! | CTTTTTCTGCTAGTCCTCTA+TGG | + | chr4_4:48524477-48524496 | None:intergenic | 40.0% |
| !!! | TGTTAGTTTTAGGCCATGTG+GGG | + | chr4_4:48524509-48524528 | None:intergenic | 40.0% |
| TGAGTCAAGAACTGTTGAGT+CGG | - | chr4_4:48524621-48524640 | Msa0684910:CDS | 40.0% | |
| ! | GTTTTCAAATTAGGCCACCA+TGG | + | chr4_4:48524712-48524731 | None:intergenic | 40.0% |
| CCATTGTTTGGATTACATCG+GGG | - | chr4_4:48524761-48524780 | Msa0684910:CDS | 40.0% | |
| TTTGGTCAGTATACTTACGC+TGG | - | chr4_4:48524802-48524821 | Msa0684910:CDS | 40.0% | |
| ! | CACTTCAACAATGTCACTTC+CGG | + | chr4_4:48524916-48524935 | None:intergenic | 40.0% |
| GTCATAGCTTGAATTTGCGA+AGG | + | chr4_4:48524943-48524962 | None:intergenic | 40.0% | |
| TCTCCAAGATATTCCTCATC+CGG | + | chr4_4:48525003-48525022 | None:intergenic | 40.0% | |
| TTCAGGAATAGAAATGGTGC+TGG | - | chr4_4:48525138-48525157 | Msa0684910:five_prime_UTR | 40.0% | |
| ! | GTTGGCTTCAAAAGCTCATA+AGG | + | chr4_4:48525171-48525190 | None:intergenic | 40.0% |
| TCATTCCGGAATACGAAATC+CGG | + | chr4_4:48525411-48525430 | None:intergenic | 40.0% | |
| TCATGCTAACTAGTGCGTCT+GGG | - | chr4_4:48523659-48523678 | Msa0684910:three_prime_UTR | 45.0% | |
| !!! | TTTTTTCTTGCCGTTGGTCG+AGG | - | chr4_4:48523826-48523845 | Msa0684910:three_prime_UTR | 45.0% |
| TTTCTGACTTCCTCGACCAA+CGG | + | chr4_4:48523839-48523858 | None:intergenic | 45.0% | |
| ACGGTCTCAATGTGCTATCA+TGG | + | chr4_4:48523910-48523929 | None:intergenic | 45.0% | |
| TGATAGCACATTGAGACCGT+TGG | - | chr4_4:48523910-48523929 | Msa0684910:three_prime_UTR | 45.0% | |
| GTAAAGACTTGCCTCCATTC+TGG | + | chr4_4:48523971-48523990 | None:intergenic | 45.0% | |
| GGCAAGTCTTTACACCTACT+TGG | - | chr4_4:48523978-48523997 | Msa0684910:exon | 45.0% | |
| ! | ACTCAACTGGTGTTTGGCTT+TGG | - | chr4_4:48524002-48524021 | Msa0684910:CDS | 45.0% |
| ATGAGCAAGGACATGAGCTT+TGG | + | chr4_4:48524035-48524054 | None:intergenic | 45.0% | |
| CTGCTAGTCCTCTATGGATT+AGG | + | chr4_4:48524471-48524490 | None:intergenic | 45.0% | |
| AAAGATCCAAATGCCCCACA+TGG | - | chr4_4:48524493-48524512 | Msa0684910:CDS | 45.0% | |
| GTGACAAGAAAGACGAACCA+TGG | - | chr4_4:48524692-48524711 | Msa0684910:CDS | 45.0% | |
| ACAAGAAAGACGAACCATGG+TGG | - | chr4_4:48524695-48524714 | Msa0684910:CDS | 45.0% | |
| CCCCGATGTAATCCAAACAA+TGG | + | chr4_4:48524764-48524783 | None:intergenic | 45.0% | |
| ! | CATCATGCTGCGGTGAATTT+TGG | - | chr4_4:48524784-48524803 | Msa0684910:CDS | 45.0% |
| !! | ATGTTGTTTCGTGCAATGGC+CGG | + | chr4_4:48524844-48524863 | None:intergenic | 45.0% |
| !! | AGGCATGTTGTTTCGTGCAA+TGG | + | chr4_4:48524848-48524867 | None:intergenic | 45.0% |
| TCTTGGAGAAACGATTGAGC+CGG | - | chr4_4:48525014-48525033 | Msa0684910:intron | 45.0% | |
| ! | ACACCTTTTCCTGTTACACC+AGG | + | chr4_4:48525201-48525220 | None:intergenic | 45.0% |
| AAAAAAAAATAGGGCGCGCG+AGG | + | chr4_4:48525368-48525387 | None:intergenic | 45.0% | |
| ! | TTCCAATTTTACCCCTGGTC+CGG | - | chr4_4:48525389-48525408 | Msa0684910:five_prime_UTR | 45.0% |
| TCATGCTAACTAGTGCGTCT+GGG | - | chr4_4:48523659-48523678 | Msa0684910:three_prime_UTR | 45.0% | |
| !!! | TTTTTTCTTGCCGTTGGTCG+AGG | - | chr4_4:48523826-48523845 | Msa0684910:three_prime_UTR | 45.0% |
| TTTCTGACTTCCTCGACCAA+CGG | + | chr4_4:48523839-48523858 | None:intergenic | 45.0% | |
| ACGGTCTCAATGTGCTATCA+TGG | + | chr4_4:48523910-48523929 | None:intergenic | 45.0% | |
| TGATAGCACATTGAGACCGT+TGG | - | chr4_4:48523910-48523929 | Msa0684910:three_prime_UTR | 45.0% | |
| GTAAAGACTTGCCTCCATTC+TGG | + | chr4_4:48523971-48523990 | None:intergenic | 45.0% | |
| GGCAAGTCTTTACACCTACT+TGG | - | chr4_4:48523978-48523997 | Msa0684910:exon | 45.0% | |
| ! | ACTCAACTGGTGTTTGGCTT+TGG | - | chr4_4:48524002-48524021 | Msa0684910:CDS | 45.0% |
| ATGAGCAAGGACATGAGCTT+TGG | + | chr4_4:48524035-48524054 | None:intergenic | 45.0% | |
| CTGCTAGTCCTCTATGGATT+AGG | + | chr4_4:48524471-48524490 | None:intergenic | 45.0% | |
| AAAGATCCAAATGCCCCACA+TGG | - | chr4_4:48524493-48524512 | Msa0684910:CDS | 45.0% | |
| GTGACAAGAAAGACGAACCA+TGG | - | chr4_4:48524692-48524711 | Msa0684910:CDS | 45.0% | |
| ACAAGAAAGACGAACCATGG+TGG | - | chr4_4:48524695-48524714 | Msa0684910:CDS | 45.0% | |
| CCCCGATGTAATCCAAACAA+TGG | + | chr4_4:48524764-48524783 | None:intergenic | 45.0% | |
| ! | CATCATGCTGCGGTGAATTT+TGG | - | chr4_4:48524784-48524803 | Msa0684910:CDS | 45.0% |
| !! | ATGTTGTTTCGTGCAATGGC+CGG | + | chr4_4:48524844-48524863 | None:intergenic | 45.0% |
| !! | AGGCATGTTGTTTCGTGCAA+TGG | + | chr4_4:48524848-48524867 | None:intergenic | 45.0% |
| TCTTGGAGAAACGATTGAGC+CGG | - | chr4_4:48525014-48525033 | Msa0684910:intron | 45.0% | |
| ! | ACACCTTTTCCTGTTACACC+AGG | + | chr4_4:48525201-48525220 | None:intergenic | 45.0% |
| AAAAAAAAATAGGGCGCGCG+AGG | + | chr4_4:48525368-48525387 | None:intergenic | 45.0% | |
| ! | TTCCAATTTTACCCCTGGTC+CGG | - | chr4_4:48525389-48525408 | Msa0684910:five_prime_UTR | 45.0% |
| GTCATGCTAACTAGTGCGTC+TGG | - | chr4_4:48523658-48523677 | Msa0684910:three_prime_UTR | 50.0% | |
| !! | CATTCTGGCTTTCCGCCAAT+TGG | + | chr4_4:48523956-48523975 | None:intergenic | 50.0% |
| CAATTGGCGGAAAGCCAGAA+TGG | - | chr4_4:48523954-48523973 | Msa0684910:three_prime_UTR | 50.0% | |
| ACACCTACTTGGCACTCAAC+TGG | - | chr4_4:48523989-48524008 | Msa0684910:CDS | 50.0% | |
| ACACCAGTTGAGTGCCAAGT+AGG | + | chr4_4:48523995-48524014 | None:intergenic | 50.0% | |
| CTTGGCACTCAACTGGTGTT+TGG | - | chr4_4:48523996-48524015 | Msa0684910:CDS | 50.0% | |
| !! | CAACTGGTGTTTGGCTTTGG+AGG | - | chr4_4:48524005-48524024 | Msa0684910:CDS | 50.0% |
| CATGTCCTTGCTCATGACTC+TGG | - | chr4_4:48524040-48524059 | Msa0684910:CDS | 50.0% | |
| ! | TTTAGGCCATGTGGGGCATT+TGG | + | chr4_4:48524502-48524521 | None:intergenic | 50.0% |
| CATGCCTACAGAAGACCCTT+CGG | - | chr4_4:48524861-48524880 | Msa0684910:CDS | 50.0% | |
| TATGACGGTGATGACCGTGT+TGG | - | chr4_4:48524957-48524976 | Msa0684910:five_prime_UTR | 50.0% | |
| TCGCCGGATGAGGAATATCT+TGG | - | chr4_4:48524997-48525016 | Msa0684910:intron | 50.0% | |
| ! | ATTGGTTCCTCTTGCCAAGC+CGG | + | chr4_4:48525036-48525055 | None:intergenic | 50.0% |
| TTGAAGCCAACATCAGAGCC+TGG | - | chr4_4:48525180-48525199 | Msa0684910:five_prime_UTR | 50.0% | |
| ! | GTTACACCAGGCTCTGATGT+TGG | + | chr4_4:48525189-48525208 | None:intergenic | 50.0% |
| ACATCAGAGCCTGGTGTAAC+AGG | - | chr4_4:48525189-48525208 | Msa0684910:five_prime_UTR | 50.0% | |
| GAGCCTGGTGTAACAGGAAA+AGG | - | chr4_4:48525195-48525214 | Msa0684910:five_prime_UTR | 50.0% | |
| ATCCGGACCAGGGGTAAAAT+TGG | + | chr4_4:48525394-48525413 | None:intergenic | 50.0% | |
| GAATACGAAATCCGGACCAG+GGG | + | chr4_4:48525403-48525422 | None:intergenic | 50.0% | |
| GGAATACGAAATCCGGACCA+GGG | + | chr4_4:48525404-48525423 | None:intergenic | 50.0% | |
| CTGGTCCGGATTTCGTATTC+CGG | - | chr4_4:48525403-48525422 | Msa0684910:five_prime_UTR | 50.0% | |
| GTCATGCTAACTAGTGCGTC+TGG | - | chr4_4:48523658-48523677 | Msa0684910:three_prime_UTR | 50.0% | |
| !! | CATTCTGGCTTTCCGCCAAT+TGG | + | chr4_4:48523956-48523975 | None:intergenic | 50.0% |
| CAATTGGCGGAAAGCCAGAA+TGG | - | chr4_4:48523954-48523973 | Msa0684910:three_prime_UTR | 50.0% | |
| ACACCTACTTGGCACTCAAC+TGG | - | chr4_4:48523989-48524008 | Msa0684910:CDS | 50.0% | |
| ACACCAGTTGAGTGCCAAGT+AGG | + | chr4_4:48523995-48524014 | None:intergenic | 50.0% | |
| CTTGGCACTCAACTGGTGTT+TGG | - | chr4_4:48523996-48524015 | Msa0684910:CDS | 50.0% | |
| !! | CAACTGGTGTTTGGCTTTGG+AGG | - | chr4_4:48524005-48524024 | Msa0684910:CDS | 50.0% |
| CATGTCCTTGCTCATGACTC+TGG | - | chr4_4:48524040-48524059 | Msa0684910:CDS | 50.0% | |
| ! | TTTAGGCCATGTGGGGCATT+TGG | + | chr4_4:48524502-48524521 | None:intergenic | 50.0% |
| CATGCCTACAGAAGACCCTT+CGG | - | chr4_4:48524861-48524880 | Msa0684910:CDS | 50.0% | |
| TATGACGGTGATGACCGTGT+TGG | - | chr4_4:48524957-48524976 | Msa0684910:five_prime_UTR | 50.0% | |
| TCGCCGGATGAGGAATATCT+TGG | - | chr4_4:48524997-48525016 | Msa0684910:intron | 50.0% | |
| ! | ATTGGTTCCTCTTGCCAAGC+CGG | + | chr4_4:48525036-48525055 | None:intergenic | 50.0% |
| TTGAAGCCAACATCAGAGCC+TGG | - | chr4_4:48525180-48525199 | Msa0684910:five_prime_UTR | 50.0% | |
| ! | GTTACACCAGGCTCTGATGT+TGG | + | chr4_4:48525189-48525208 | None:intergenic | 50.0% |
| ACATCAGAGCCTGGTGTAAC+AGG | - | chr4_4:48525189-48525208 | Msa0684910:five_prime_UTR | 50.0% | |
| GAGCCTGGTGTAACAGGAAA+AGG | - | chr4_4:48525195-48525214 | Msa0684910:five_prime_UTR | 50.0% | |
| ATCCGGACCAGGGGTAAAAT+TGG | + | chr4_4:48525394-48525413 | None:intergenic | 50.0% | |
| GAATACGAAATCCGGACCAG+GGG | + | chr4_4:48525403-48525422 | None:intergenic | 50.0% | |
| GGAATACGAAATCCGGACCA+GGG | + | chr4_4:48525404-48525423 | None:intergenic | 50.0% | |
| CTGGTCCGGATTTCGTATTC+CGG | - | chr4_4:48525403-48525422 | Msa0684910:five_prime_UTR | 50.0% | |
| ! | AACTAGTGCGTCTGGGACAC+TGG | - | chr4_4:48523666-48523685 | Msa0684910:three_prime_UTR | 55.0% |
| CGAGCTAACTCGATCGCCAA+CGG | + | chr4_4:48523929-48523948 | None:intergenic | 55.0% | |
| CGTTGGCGATCGAGTTAGCT+CGG | - | chr4_4:48523927-48523946 | Msa0684910:three_prime_UTR | 55.0% | |
| !! | TCTGGCTTTCCGCCAATTGG+CGG | + | chr4_4:48523953-48523972 | None:intergenic | 55.0% |
| TTGGCGGAAAGCCAGAATGG+AGG | - | chr4_4:48523957-48523976 | Msa0684910:three_prime_UTR | 55.0% | |
| GGTAGCCAGAGTCATGAGCA+AGG | + | chr4_4:48524048-48524067 | None:intergenic | 55.0% | |
| ! | TACATCGGGGCATCATGCTG+CGG | - | chr4_4:48524774-48524793 | Msa0684910:CDS | 55.0% |
| CGTGCAATGGCCGGTCTATT+AGG | + | chr4_4:48524835-48524854 | None:intergenic | 55.0% | |
| CTGTCCGAAGGGTCTTCTGT+AGG | + | chr4_4:48524868-48524887 | None:intergenic | 55.0% | |
| AAGACCCTTCGGACAGCGAA+TGG | - | chr4_4:48524872-48524891 | Msa0684910:CDS | 55.0% | |
| AGACCCTTCGGACAGCGAAT+GGG | - | chr4_4:48524873-48524892 | Msa0684910:CDS | 55.0% | |
| GTTCCCATTCGCTGTCCGAA+GGG | + | chr4_4:48524879-48524898 | None:intergenic | 55.0% | |
| AGTTCCCATTCGCTGTCCGA+AGG | + | chr4_4:48524880-48524899 | None:intergenic | 55.0% | |
| GTCAAGTCATTCGCCGGATG+AGG | - | chr4_4:48524987-48525006 | Msa0684910:five_prime_UTR | 55.0% | |
| GAGAAACGATTGAGCCGGCT+TGG | - | chr4_4:48525019-48525038 | Msa0684910:intron | 55.0% | |
| !! | GGGAGGTTGATGGAGCTTGA+AGG | - | chr4_4:48525084-48525103 | Msa0684910:intron | 55.0% |
| AAAATAGGGCGCGCGAGGAA+AGG | + | chr4_4:48525363-48525382 | None:intergenic | 55.0% | |
| CGGAATACGAAATCCGGACC+AGG | + | chr4_4:48525405-48525424 | None:intergenic | 55.0% | |
| ! | AACTAGTGCGTCTGGGACAC+TGG | - | chr4_4:48523666-48523685 | Msa0684910:three_prime_UTR | 55.0% |
| CGAGCTAACTCGATCGCCAA+CGG | + | chr4_4:48523929-48523948 | None:intergenic | 55.0% | |
| CGTTGGCGATCGAGTTAGCT+CGG | - | chr4_4:48523927-48523946 | Msa0684910:three_prime_UTR | 55.0% | |
| !! | TCTGGCTTTCCGCCAATTGG+CGG | + | chr4_4:48523953-48523972 | None:intergenic | 55.0% |
| TTGGCGGAAAGCCAGAATGG+AGG | - | chr4_4:48523957-48523976 | Msa0684910:three_prime_UTR | 55.0% | |
| GGTAGCCAGAGTCATGAGCA+AGG | + | chr4_4:48524048-48524067 | None:intergenic | 55.0% | |
| ! | TACATCGGGGCATCATGCTG+CGG | - | chr4_4:48524774-48524793 | Msa0684910:CDS | 55.0% |
| CGTGCAATGGCCGGTCTATT+AGG | + | chr4_4:48524835-48524854 | None:intergenic | 55.0% | |
| CTGTCCGAAGGGTCTTCTGT+AGG | + | chr4_4:48524868-48524887 | None:intergenic | 55.0% | |
| AAGACCCTTCGGACAGCGAA+TGG | - | chr4_4:48524872-48524891 | Msa0684910:CDS | 55.0% | |
| AGACCCTTCGGACAGCGAAT+GGG | - | chr4_4:48524873-48524892 | Msa0684910:CDS | 55.0% | |
| GTTCCCATTCGCTGTCCGAA+GGG | + | chr4_4:48524879-48524898 | None:intergenic | 55.0% | |
| AGTTCCCATTCGCTGTCCGA+AGG | + | chr4_4:48524880-48524899 | None:intergenic | 55.0% | |
| GTCAAGTCATTCGCCGGATG+AGG | - | chr4_4:48524987-48525006 | Msa0684910:five_prime_UTR | 55.0% | |
| GAGAAACGATTGAGCCGGCT+TGG | - | chr4_4:48525019-48525038 | Msa0684910:intron | 55.0% | |
| !! | GGGAGGTTGATGGAGCTTGA+AGG | - | chr4_4:48525084-48525103 | Msa0684910:intron | 55.0% |
| AAAATAGGGCGCGCGAGGAA+AGG | + | chr4_4:48525363-48525382 | None:intergenic | 55.0% | |
| CGGAATACGAAATCCGGACC+AGG | + | chr4_4:48525405-48525424 | None:intergenic | 55.0% | |
| GAGTTAGCTCGGCCGCCAAT+TGG | - | chr4_4:48523938-48523957 | Msa0684910:three_prime_UTR | 60.0% | |
| TTAGCTCGGCCGCCAATTGG+CGG | - | chr4_4:48523941-48523960 | Msa0684910:three_prime_UTR | 60.0% | |
| !! | GATTGAGCCGGCTTGGCAAG+AGG | - | chr4_4:48525026-48525045 | Msa0684910:intron | 60.0% |
| ! | CGCGAGGAAAGGCATAGGGT+GGG | + | chr4_4:48525352-48525371 | None:intergenic | 60.0% |
| GAGTTAGCTCGGCCGCCAAT+TGG | - | chr4_4:48523938-48523957 | Msa0684910:three_prime_UTR | 60.0% | |
| TTAGCTCGGCCGCCAATTGG+CGG | - | chr4_4:48523941-48523960 | Msa0684910:three_prime_UTR | 60.0% | |
| !! | GATTGAGCCGGCTTGGCAAG+AGG | - | chr4_4:48525026-48525045 | Msa0684910:intron | 60.0% |
| ! | CGCGAGGAAAGGCATAGGGT+GGG | + | chr4_4:48525352-48525371 | None:intergenic | 60.0% |
| ! | GCGCGAGGAAAGGCATAGGG+TGG | + | chr4_4:48525353-48525372 | None:intergenic | 65.0% |
| ! | GGCGCGCGAGGAAAGGCATA+GGG | + | chr4_4:48525356-48525375 | None:intergenic | 65.0% |
| ! | GCGCGAGGAAAGGCATAGGG+TGG | + | chr4_4:48525353-48525372 | None:intergenic | 65.0% |
| ! | GGCGCGCGAGGAAAGGCATA+GGG | + | chr4_4:48525356-48525375 | None:intergenic | 65.0% |
| ! | GGGCGCGCGAGGAAAGGCAT+AGG | + | chr4_4:48525357-48525376 | None:intergenic | 70.0% |
| ! | GGGCGCGCGAGGAAAGGCAT+AGG | + | chr4_4:48525357-48525376 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 48523564 | 48525660 | 48523564 | ID=Msa0684910;Name=Msa0684910 |
| chr4_4 | mRNA | 48523564 | 48525660 | 48523564 | ID=Msa0684910-mRNA-1;Parent=Msa0684910;Name=Msa0684910-mRNA-1;_AED=0.03;_eAED=0.03;_QI=584|1|1|1|1|1|2|418|322 |
| chr4_4 | exon | 48523564 | 48525011 | 48523564 | ID=Msa0684910-mRNA-1:exon:12033;Parent=Msa0684910-mRNA-1 |
| chr4_4 | exon | 48525138 | 48525660 | 48525138 | ID=Msa0684910-mRNA-1:exon:12032;Parent=Msa0684910-mRNA-1 |
| chr4_4 | five_prime_UTR | 48525138 | 48525660 | 48525138 | ID=Msa0684910-mRNA-1:five_prime_utr;Parent=Msa0684910-mRNA-1 |
| chr4_4 | five_prime_UTR | 48524951 | 48525011 | 48524951 | ID=Msa0684910-mRNA-1:five_prime_utr;Parent=Msa0684910-mRNA-1 |
| chr4_4 | CDS | 48523982 | 48524950 | 48523982 | ID=Msa0684910-mRNA-1:cds;Parent=Msa0684910-mRNA-1 |
| chr4_4 | three_prime_UTR | 48523564 | 48523981 | 48523564 | ID=Msa0684910-mRNA-1:three_prime_utr;Parent=Msa0684910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
