AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0636760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0636760 MtrunA17_Chr4g0033171 97.701 696 16 0 211 906 30 725 0.0 1421
Msa0636760 MtrunA17_Chr3g0118651 60.844 853 318 7 59 906 62 903 0.0 1115
Msa0636760 MtrunA17_Chr3g0118641 59.096 885 346 8 27 906 29 902 0.0 1092
Msa0636760 MtrunA17_Chr3g0118621 62.352 842 308 8 70 906 28 865 0.0 1063
Msa0636760 MtrunA17_Chr8g0344201 48.636 843 416 11 74 905 90 926 0.0 824
Msa0636760 MtrunA17_Chr8g0377101 47.580 847 425 11 72 906 77 916 0.0 820
Msa0636760 MtrunA17_Chr1g0205611 44.245 834 432 17 98 906 31 856 0.0 691
Msa0636760 MtrunA17_Chr8g0342881 44.282 822 435 15 98 906 45 856 0.0 677
Msa0636760 MtrunA17_Chr8g0343011 44.135 827 424 15 98 906 59 865 0.0 674
Msa0636760 MtrunA17_Chr8g0344211 44.214 821 437 13 98 906 57 868 0.0 673
Msa0636760 MtrunA17_Chr2g0329901 42.580 876 460 18 52 906 10 863 0.0 667
Msa0636760 MtrunA17_Chr8g0342921 43.349 842 437 16 84 906 49 869 0.0 666
Msa0636760 MtrunA17_Chr2g0329911 41.705 868 477 15 52 906 10 861 0.0 665
Msa0636760 MtrunA17_Chr8g0343021 43.489 837 442 15 85 906 44 864 0.0 664
Msa0636760 MtrunA17_Chr5g0406871 42.063 882 470 19 48 906 4 867 0.0 661
Msa0636760 MtrunA17_Chr8g0342971 42.630 882 468 19 46 906 6 870 0.0 660
Msa0636760 MtrunA17_Chr1g0191921 44.178 833 426 15 98 906 41 858 0.0 659
Msa0636760 MtrunA17_Chr8g0343031 43.256 823 438 14 99 906 57 865 0.0 655
Msa0636760 MtrunA17_Chr8g0342891 42.271 828 443 15 98 906 50 861 0.0 648
Msa0636760 MtrunA17_Chr4g0047281 43.086 810 418 14 109 905 115 894 0.0 648
Msa0636760 MtrunA17_Chr8g0342951 42.694 876 470 18 48 906 8 868 0.0 646
Msa0636760 MtrunA17_Chr8g0342931 45.241 767 388 15 155 906 1 750 0.0 645
Msa0636760 MtrunA17_Chr7g0272791 42.099 829 453 16 98 906 46 867 0.0 637
Msa0636760 MtrunA17_Chr8g0342901 42.663 811 421 15 102 906 56 828 0.0 632
Msa0636760 MtrunA17_Chr3g0120071 39.796 882 481 23 48 906 4 858 0.0 605
Msa0636760 MtrunA17_Chr8g0342981 41.585 820 429 16 106 906 35 823 0.0 592
Msa0636760 MtrunA17_Chr8g0343001 43.158 760 377 13 152 906 98 807 0.0 581
Msa0636760 MtrunA17_Chr8g0342991 42.500 760 382 13 152 906 98 807 0.0 576
Msa0636760 MtrunA17_Chr8g0338451 37.272 821 469 18 98 889 47 850 5.92e-175 529
Msa0636760 MtrunA17_Chr4g0033181 94.787 211 11 0 1 211 1 211 2.07e-140 417
Msa0636760 MtrunA17_Chr8g0344241 47.118 399 204 5 511 906 67 461 6.65e-117 364
Msa0636760 MtrunA17_Chr6g0471951 36.275 510 271 10 363 861 8 474 4.78e-103 329
Msa0636760 MtrunA17_Chr7g0218231 68.908 119 37 0 555 673 14 132 2.00e-54 185
Msa0636760 MtrunA17_Chr6g0468081 67.416 89 29 0 585 673 1 89 1.14e-35 130
Msa0636760 MtrunA17_Chr4g0047271 47.253 91 47 1 816 905 1 91 3.72e-18 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0636760 AT3G45140.1 56.905 840 344 8 71 906 71 896 0.0 1003
Msa0636760 AT3G45140.2 59.605 760 297 6 151 906 1 754 0.0 961
Msa0636760 AT1G72520.1 48.815 844 413 12 74 906 91 926 0.0 833
Msa0636760 AT1G17420.1 48.951 858 412 12 63 906 74 919 0.0 826
Msa0636760 AT1G67560.1 46.416 851 428 14 72 906 79 917 0.0 784
Msa0636760 AT1G55020.1 45.301 830 420 16 98 906 43 859 0.0 679
Msa0636760 AT3G22400.1 43.578 872 448 18 70 906 24 886 0.0 677

Find 239 sgRNAs with CRISPR-Local

Find 533 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTTGACCCTAAAATTTA+TGG 0.171306 4_3:-27709633 Msa0636760:CDS
CATACCATCTCTAATATATT+TGG 0.178467 4_3:+27707852 None:intergenic
CTCTTTCTGCAAGAGTTAAA+AGG 0.191733 4_3:-27716617 Msa0636760:five_prime_UTR
CAAATGATGGTCTTATTCTT+TGG 0.204203 4_3:-27708632 Msa0636760:CDS
ACAACCTCCTTTGTTTCTTT+TGG 0.222665 4_3:+27716442 None:intergenic
CATCATGCTGCGGTGAATTT+TGG 0.226534 4_3:-27708396 Msa0636760:CDS
GGATAATGATGAAACCTTAT+TGG 0.262122 4_3:+27712991 None:intergenic
ATAAAGCAAATTGTTCTTGA+TGG 0.271031 4_3:-27713100 Msa0636760:CDS
CATTTCATTCCATTATTTCA+TGG 0.272738 4_3:+27707550 None:intergenic
CTTGAAGGCACAACATTATA+TGG 0.278755 4_3:-27709320 Msa0636760:CDS
CGTGCAATGGCCGGTCTATT+AGG 0.281859 4_3:+27708348 None:intergenic
TTTGAAGTACCAGGAAGTTT+TGG 0.287906 4_3:-27713172 Msa0636760:CDS
TGGTTTAGGGATGAAGAATT+TGG 0.299482 4_3:-27709849 Msa0636760:CDS
GTAAAGACTTGCCTCCATTC+TGG 0.301347 4_3:+27709212 None:intergenic
AGAAACAAAGGAGGTTGTTT+AGG 0.305076 4_3:-27716437 Msa0636760:CDS
AGGGAGAGAAGTTATGGTTA+TGG 0.307083 4_3:+27716653 None:intergenic
CATTCTGGCTTTCCGCCAAT+TGG 0.310117 4_3:+27709227 None:intergenic
CTTGGCACTCAACTGGTGTT+TGG 0.311025 4_3:-27709184 Msa0636760:CDS
TCTATTCCTGAACTTCATAT+TGG 0.311612 4_3:+27708053 None:intergenic
CTTAACCTTATCAATCCTTC+TGG 0.318156 4_3:+27710746 None:intergenic
TAACTCATTCCATGAAATAA+TGG 0.321420 4_3:-27707559 Msa0636760:three_prime_UTR
GTTCTACAACGCCTAGGATA+TGG 0.322916 4_3:+27710575 None:intergenic
AAATGATGGTCTTATTCTTT+GGG 0.323159 4_3:-27708631 Msa0636760:CDS
ACTCAACTGGTGTTTGGCTT+TGG 0.325509 4_3:-27709178 Msa0636760:CDS
TATAATGTTAAATAAAGTTT+TGG 0.327389 4_3:-27707882 Msa0636760:three_prime_UTR
AAGTTGGATTGAATATAATT+TGG 0.328267 4_3:+27707828 None:intergenic
CACTTCAACAATGTCACTTC+CGG 0.328499 4_3:+27708267 None:intergenic
ACCAAGAGAGAGAGTTGTTT+AGG 0.333667 4_3:+27708792 None:intergenic
TTTAGGCCATGTGGAGCATT+TGG 0.339085 4_3:+27708681 None:intergenic
GGGAGAGAAGTTATGGTTAT+GGG 0.342656 4_3:+27716654 None:intergenic
ACATCAGAGCCTGGTGTAAC+AGG 0.346010 4_3:-27707991 Msa0636760:CDS
CAACTGGTGTTTGGCTTTGG+AGG 0.346039 4_3:-27709175 Msa0636760:CDS
TTTGGGATACTATCAAATCT+TGG 0.346372 4_3:-27708614 Msa0636760:CDS
GAACTTAAACGACCTGTTCT+TGG 0.346682 4_3:-27710611 Msa0636760:CDS
TTCATTGAAAAGGTCATCTA+TGG 0.347003 4_3:+27710242 None:intergenic
GTCTCATATGTCGACTAAAA+AGG 0.348447 4_3:-27707704 Msa0636760:three_prime_UTR
TTGTTCAAGATGAGACAATT+TGG 0.358818 4_3:+27716537 None:intergenic
GAGAAGAGGGAGAGAAGTTA+TGG 0.360913 4_3:+27716647 None:intergenic
CACTCCCTAGAGATGTAATC+AGG 0.370761 4_3:+27707623 None:intergenic
TTAAGTTCGGGATCGCTGTC+TGG 0.374623 4_3:+27710626 None:intergenic
AAATAGTGACGACCATTGTT+TGG 0.375344 4_3:-27708431 Msa0636760:CDS
CTGTTTGTTGCTATAATGTA+AGG 0.375603 4_3:+27708942 None:intergenic
ATCCAACATGAAAACATGTT+TGG 0.381038 4_3:+27716487 None:intergenic
TTGTGGAAAATGAGCATAGA+AGG 0.384517 4_3:-27713132 Msa0636760:CDS
ACCATTGTTTGGATTACATC+GGG 0.389981 4_3:-27708420 Msa0636760:CDS
TGGCAGAGGACAGATTCTTT+TGG 0.392055 4_3:-27709869 Msa0636760:intron
GGAATGCCAATATGAAGTTC+AGG 0.393968 4_3:-27708059 Msa0636760:CDS
TATCCTAGGCGTTGTAGAAC+TGG 0.394768 4_3:-27710572 Msa0636760:CDS
ATAGTGTAATGAAGGCTAAA+TGG 0.398580 4_3:+27707599 None:intergenic
TCTCAAATAGAGACACTATA+TGG 0.403294 4_3:+27707958 None:intergenic
AAGAACAGGTCGTTTAAGTT+CGG 0.403315 4_3:+27710613 None:intergenic
CCAATATCTCCAAAACTTCC+TGG 0.404847 4_3:+27713163 None:intergenic
TTGGGATACTATCAAATCTT+GGG 0.406679 4_3:-27708613 Msa0636760:CDS
ACACCTACTTGGCACTCAAC+TGG 0.407754 4_3:-27709191 Msa0636760:CDS
GTTCTTGATGGCTTTCTCAC+TGG 0.412239 4_3:-27713088 Msa0636760:CDS
ATCATCAGGGTTGTCATGCT+TGG 0.413714 4_3:+27713030 None:intergenic
CCTCTATGAATGAGGTCATT+TGG 0.416836 4_3:+27708720 None:intergenic
CTGTGTTGCCAAGGTTGGTC+AGG 0.418531 4_3:-27710176 Msa0636760:CDS
TGATGACATAACCGATTTGT+TGG 0.420284 4_3:-27716271 Msa0636760:CDS
GTTGGGTAAATCAATTCTCT+TGG 0.421329 4_3:-27716253 Msa0636760:CDS
AGAATATCACTACTGAGGTC+TGG 0.422372 4_3:-27707453 Msa0636760:three_prime_UTR
GGAAGACCTCGTTGCGATAC+AGG 0.429976 4_3:-27710551 Msa0636760:intron
ATAAGACCATCATTTGCATA+AGG 0.432398 4_3:+27708639 None:intergenic
AAAATGACCCTCTTATCATC+AGG 0.437774 4_3:+27713016 None:intergenic
TAATCCTTGTTGCATCCAAT+TGG 0.438384 4_3:-27709805 Msa0636760:CDS
GAATATCACTACTGAGGTCT+GGG 0.441179 4_3:-27707452 Msa0636760:three_prime_UTR
CCTTACTCTTGAGTCGCCCT+TGG 0.444639 4_3:+27707797 None:intergenic
AAGCCATGTCTCCATGGTAT+TGG 0.449477 4_3:-27716516 Msa0636760:CDS
TGTTCTTTGCCACCAAGAAC+AGG 0.450316 4_3:+27710599 None:intergenic
GAGTTAGCTCGGCCGCCAAT+TGG 0.451009 4_3:-27709242 Msa0636760:CDS
GGCAAGTCTTTACACCTACT+TGG 0.451346 4_3:-27709202 Msa0636760:CDS
GATGACATAACCGATTTGTT+GGG 0.451366 4_3:-27716270 Msa0636760:CDS
AGAACAGGTCGTTTAAGTTC+GGG 0.451858 4_3:+27710614 None:intergenic
AAAGAGAAGTTATGAGAAGA+GGG 0.451983 4_3:+27716634 None:intergenic
GCTGTAGTGGACAAGAATCT+TGG 0.452160 4_3:-27710282 Msa0636760:CDS
AAAGTTCAAAGGGAGGTTGA+TGG 0.452373 4_3:-27708106 Msa0636760:CDS
TCTTTCTGCAAGAGTTAAAA+GGG 0.455179 4_3:-27716616 Msa0636760:five_prime_UTR
ACCAGTGACTAACAAGTTGA+TGG 0.456313 4_3:+27709114 None:intergenic
CATGTCCTTGCTCATGACTC+TGG 0.457266 4_3:-27709140 Msa0636760:CDS
GTTGGCTTCAAAAGCTCATA+AGG 0.458492 4_3:+27708012 None:intergenic
AGTTAAATCCTTCATTGAAA+AGG 0.459003 4_3:+27710232 None:intergenic
TTCAGCAAATACCTTACAAT+CGG 0.459678 4_3:-27710337 Msa0636760:CDS
AGTAGTATACCGTGACCAAT+TGG 0.462083 4_3:+27709790 None:intergenic
AAGCATGGTGGTATGAGATT+AGG 0.463349 4_3:-27708524 Msa0636760:CDS
AATTGATTTACCCAACAAAT+CGG 0.464268 4_3:+27716260 None:intergenic
GTGGTTATTGCTGATTCAGC+AGG 0.464570 4_3:+27709609 None:intergenic
GTCAAGTCATTCGCCGGATG+AGG 0.467476 4_3:-27708193 Msa0636760:CDS
TCTGGCTTTCCGCCAATTGG+CGG 0.468670 4_3:+27709230 None:intergenic
TCGCCGGATGAGGAATATCT+TGG 0.470343 4_3:-27708183 Msa0636760:CDS
GAAAGAGAAGTTATGAGAAG+AGG 0.473228 4_3:+27716633 None:intergenic
ATGAAGTTCAGGAATAGAAA+TGG 0.474519 4_3:-27708048 Msa0636760:CDS
ATGAGCAAGGACATGAGCTT+TGG 0.474874 4_3:+27709148 None:intergenic
AACAAAGGAGGTTGTTTAGG+AGG 0.475654 4_3:-27716434 Msa0636760:CDS
GGAAGTAATAGTTTGTAGAT+TGG 0.475694 4_3:+27708900 None:intergenic
TTGCCTCCGCAAGCTGAGAA+AGG 0.479865 4_3:-27710210 Msa0636760:CDS
AAATTGCCAATGCTTATCAT+AGG 0.480247 4_3:+27708758 None:intergenic
TCTCCAAGATATTCCTCATC+CGG 0.481001 4_3:+27708180 None:intergenic
TGCGTCTGTGTTGCCAAGGT+TGG 0.481745 4_3:-27710181 Msa0636760:CDS
GTTACACCAGGCTCTGATGT+TGG 0.481878 4_3:+27707994 None:intergenic
GAGCCTGGTGTAACAGGAAA+AGG 0.483878 4_3:-27707985 Msa0636760:CDS
GAGAAACGATTGAGCCGGCT+TGG 0.485512 4_3:-27708161 Msa0636760:CDS
CCGGCCCTGATTACATCTCT+AGG 0.486296 4_3:-27707628 Msa0636760:three_prime_UTR
TGCCTCCGCAAGCTGAGAAA+GGG 0.489278 4_3:-27710209 Msa0636760:CDS
CTTCCACTGATCTATGCGTC+TGG 0.491600 4_3:+27713215 None:intergenic
GTTAGCTCCGAGCTAGATCC+CGG 0.491907 4_3:-27716225 Msa0636760:intron
TGCGTGGAAAGCCGATTGTA+AGG 0.492059 4_3:+27710326 None:intergenic
TCCTAAACAACTCTCTCTCT+TGG 0.492379 4_3:-27708793 Msa0636760:CDS
TAAGACCATCATTTGCATAA+GGG 0.494543 4_3:+27708640 None:intergenic
ATGACAACCCTGATGATAAG+AGG 0.495085 4_3:-27713024 Msa0636760:CDS
GAGACAAAATTGGAGAAGGA+AGG 0.497417 4_3:-27713256 Msa0636760:CDS
ATTGATAAGGTTAAGAGAAG+AGG 0.497584 4_3:-27710738 Msa0636760:CDS
TCAAAAGCAGCTTTAATCAT+CGG 0.502785 4_3:+27708129 None:intergenic
TCTGAGAAGGATTCGTCCCT+CGG 0.504722 4_3:+27710378 None:intergenic
ACGGTCTCAATGTGCTATCA+TGG 0.506109 4_3:+27709273 None:intergenic
CTGCTAGTCCTCTATGAATG+AGG 0.508752 4_3:+27708712 None:intergenic
TTCAGGAATAGAAATGGTGC+TGG 0.509228 4_3:-27708042 Msa0636760:CDS
AAGACCCTTCGGACAGCGAA+TGG 0.509994 4_3:-27708308 Msa0636760:CDS
ATCGGTTCCTCTTGCCAAGC+CGG 0.510599 4_3:+27708147 None:intergenic
TTGACTCATTGTTATAGTAG+TGG 0.511572 4_3:+27708574 None:intergenic
TATGAATGAGGTCATTTGGT+AGG 0.515265 4_3:+27708724 None:intergenic
GAGAAAAGTCCTCCAACTGT+TGG 0.515763 4_3:+27716318 None:intergenic
ATGTTGTTTCGTGCAATGGC+CGG 0.516262 4_3:+27708339 None:intergenic
TTCTTGCGTCTGTGTTGCCA+AGG 0.521427 4_3:-27710185 Msa0636760:CDS
TTGAAGCCAACATCAGAGCC+TGG 0.522494 4_3:-27708000 Msa0636760:CDS
TTTGGAAGACAGACTATAGC+AGG 0.522688 4_3:-27709831 Msa0636760:CDS
ATCTTACTGTCCATTGTGGC+GGG 0.524956 4_3:+27710111 None:intergenic
ATCCAACTTGATTACATCCA+AGG 0.525333 4_3:-27707814 Msa0636760:three_prime_UTR
AGGCATGTTGTTTCGTGCAA+TGG 0.525554 4_3:+27708335 None:intergenic
ATGAATGAGGTCATTTGGTA+GGG 0.526073 4_3:+27708725 None:intergenic
GCAAAGAACATCCATATCCT+AGG 0.527336 4_3:-27710586 Msa0636760:CDS
AGACCCTTCGGACAGCGAAT+GGG 0.527739 4_3:-27708307 Msa0636760:CDS
TTGCTAGCATAGTGTAATGA+AGG 0.530666 4_3:+27707591 None:intergenic
TCAGAAATGGCTATAGAAAG+AGG 0.531378 4_3:-27716297 Msa0636760:CDS
CTTAAACGACCTGTTCTTGG+TGG 0.533575 4_3:-27710608 Msa0636760:CDS
TTGACAAGCCTGACCAACCT+TGG 0.535049 4_3:+27710168 None:intergenic
ACCATCAACTTGTTAGTCAC+TGG 0.535909 4_3:-27709115 Msa0636760:intron
AATCCTTCTGGTGTTTCAGA+TGG 0.536422 4_3:+27710758 None:intergenic
GCCCTTGGATGTAATCAAGT+TGG 0.536500 4_3:+27707812 None:intergenic
GCACAACATTATATGGATCA+AGG 0.536766 4_3:-27709313 Msa0636760:CDS
ACTGTTCAACCAACAGTTGG+AGG 0.537630 4_3:-27716327 Msa0636760:CDS
GGGAGGTTGATGGAGCTTGA+AGG 0.538098 4_3:-27708096 Msa0636760:CDS
TTAGCTCGGCCGCCAATTGG+CGG 0.540332 4_3:-27709239 Msa0636760:CDS
TCATCTATGGCTGAGAAAAG+AGG 0.540800 4_3:+27710255 None:intergenic
GATTACCCTTATGCAAATGA+TGG 0.542032 4_3:-27708645 Msa0636760:CDS
AAACACCAGAAGGATTGATA+AGG 0.546240 4_3:-27710751 Msa0636760:CDS
CTGTCCGAAGGGTCTTCTGT+AGG 0.547242 4_3:+27708315 None:intergenic
GAGAAGTTATGGTTATGGGA+TGG 0.550391 4_3:+27716658 None:intergenic
CCAAGGGCGACTCAAGAGTA+AGG 0.550503 4_3:-27707797 Msa0636760:three_prime_UTR
GAGGAAGTCAGAAAACTTGA+AGG 0.554158 4_3:-27709335 Msa0636760:CDS
TTTGGTTACTTCCAATACCA+TGG 0.556225 4_3:+27716505 None:intergenic
CATCTATGGCTGAGAAAAGA+GGG 0.557786 4_3:+27710256 None:intergenic
AGAAACCCTTTCTCAGCTTG+CGG 0.559756 4_3:+27710204 None:intergenic
TTGGAGAAGGAAGGAATCAA+AGG 0.560037 4_3:-27713247 Msa0636760:CDS
CAATAGCCTATGATAAGCAT+TGG 0.560181 4_3:-27708764 Msa0636760:CDS
CTTCCAATACCATGGAGACA+TGG 0.561407 4_3:+27716513 None:intergenic
TCTTGGAGAAACGATTGAGC+CGG 0.561911 4_3:-27708166 Msa0636760:CDS
AGATATTGGTGCAGTTCTTG+TGG 0.562515 4_3:-27713149 Msa0636760:CDS
AAAAGAGACAAAATTGGAGA+AGG 0.563624 4_3:-27713260 Msa0636760:intron
CTGAAAACTTTACGAGGCAA+TGG 0.564230 4_3:-27710713 Msa0636760:CDS
GAAGCACTTATAAATGCAGA+TGG 0.564500 4_3:-27708837 Msa0636760:CDS
TCCATTGTGTACCTAAAATG+TGG 0.564722 4_3:+27708879 None:intergenic
GAGTTGCTTTAATTCTGAGA+AGG 0.565436 4_3:+27710365 None:intergenic
CGTTGGCGATCGAGTTAGCT+CGG 0.566042 4_3:-27709253 Msa0636760:CDS
AACCCTTTCTCAGCTTGCGG+AGG 0.566717 4_3:+27710207 None:intergenic
CGGCCCTGATTACATCTCTA+GGG 0.569101 4_3:-27707627 Msa0636760:three_prime_UTR
GTCATAGCTTGAATTTGCGA+AGG 0.572643 4_3:+27708240 None:intergenic
AGTTCCCATTCGCTGTCCGA+AGG 0.574184 4_3:+27708303 None:intergenic
GACCATTGTTTGGATTACAT+CGG 0.574726 4_3:-27708421 Msa0636760:CDS
TGACTTACCGGGATCTAGCT+CGG 0.577812 4_3:+27716218 None:intergenic
TTTCTGACTTCCTCGACCAA+CGG 0.578983 4_3:+27709344 None:intergenic
CAGAAATGGCTATAGAAAGA+GGG 0.580132 4_3:-27716296 Msa0636760:CDS
CAATTGGCGGAAAGCCAGAA+TGG 0.580426 4_3:-27709226 Msa0636760:CDS
TTGTTGCTCAATCATTTCAG+TGG 0.580753 4_3:+27709590 None:intergenic
ACACCAGTTGAGTGCCAAGT+AGG 0.585215 4_3:+27709188 None:intergenic
TCCAACTTGATTACATCCAA+GGG 0.586397 4_3:-27707813 Msa0636760:three_prime_UTR
TTGAACAAGCCATGTCTCCA+TGG 0.586444 4_3:-27716522 Msa0636760:CDS
GTTACTGTTCAACCAACAGT+TGG 0.586551 4_3:-27716330 Msa0636760:CDS
CCAAATGACCTCATTCATAG+AGG 0.586797 4_3:-27708720 Msa0636760:CDS
GATTGAGCCGGCTTGGCAAG+AGG 0.589180 4_3:-27708154 Msa0636760:CDS
TATCTTACTGTCCATTGTGG+CGG 0.591570 4_3:+27710110 None:intergenic
GAACGTACATTGTTTACAGT+CGG 0.593956 4_3:+27716680 None:intergenic
CCTAGAGATGTAATCAGGGC+CGG 0.594907 4_3:+27707628 None:intergenic
GGTTGTGAAAACAGCTGTAG+TGG 0.595530 4_3:-27710295 Msa0636760:CDS
GTTGGTCAGGCTTGTCAATG+AGG 0.596030 4_3:-27710163 Msa0636760:CDS
GTTCCCATTCGCTGTCCGAA+GGG 0.597179 4_3:+27708304 None:intergenic
TTTGGTCAGTATACTTACGC+TGG 0.598381 4_3:-27708378 Msa0636760:CDS
TGCTATAATGTAAGGCTCTG+TGG 0.599707 4_3:+27708950 None:intergenic
CATGCCTACAGAAGACCCTT+CGG 0.600883 4_3:-27708319 Msa0636760:CDS
TGGTATGAGATTAGGAATGT+TGG 0.601692 4_3:-27708516 Msa0636760:CDS
CCACTGATCTATGCGTCTGG+TGG 0.602891 4_3:+27713218 None:intergenic
AAATGACCCTCTTATCATCA+GGG 0.603935 4_3:+27713017 None:intergenic
TTGAAGGTATAATAGATGAG+AGG 0.604595 4_3:-27708080 Msa0636760:CDS
AAATATCTTACTGTCCATTG+TGG 0.606843 4_3:+27710107 None:intergenic
TTCGCAAATTCAAGCTATGA+CGG 0.607036 4_3:-27708238 Msa0636760:CDS
CGAGCTAACTCGATCGCCAA+CGG 0.607861 4_3:+27709254 None:intergenic
TCAGGCTTGTCAATGAGGCT+AGG 0.608501 4_3:-27710158 Msa0636760:CDS
TGTGGAAAATGAGCATAGAA+GGG 0.608699 4_3:-27713131 Msa0636760:CDS
TCACAACCGGTAAAAGTGCG+TGG 0.609810 4_3:+27710310 None:intergenic
AGGACATGCTACAGTTGAAG+AGG 0.610205 4_3:-27709562 Msa0636760:intron
GAAGCTGAATTTGAAGTACC+AGG 0.611074 4_3:-27713181 Msa0636760:CDS
CTTCCAGTTCTACAACGCCT+AGG 0.613399 4_3:+27710569 None:intergenic
TTGTTGCATCCAATTGGTCA+CGG 0.613442 4_3:-27709799 Msa0636760:intron
TGATAGCACATTGAGACCGT+TGG 0.613528 4_3:-27709270 Msa0636760:CDS
TCATAGCTTGAATTTGCGAA+GGG 0.614455 4_3:+27708241 None:intergenic
CGGATAAAGAATTACAAGCA+TGG 0.616013 4_3:-27708539 Msa0636760:CDS
TTGTGGCGGGAGTCTCGAAA+CGG 0.619459 4_3:+27710124 None:intergenic
ACTTTACGAGGCAATGGACA+AGG 0.619463 4_3:-27710707 Msa0636760:CDS
ATGATTGAGCAACAAATCAG+AGG 0.621173 4_3:-27709582 Msa0636760:CDS
TGACAACCCTGATGATAAGA+GGG 0.622995 4_3:-27713023 Msa0636760:CDS
TTTCGAGACTCCCGCCACAA+TGG 0.628813 4_3:-27710121 Msa0636760:CDS
TCATAAACCAAAAGAAACAA+AGG 0.629237 4_3:-27716449 Msa0636760:CDS
CCCCGATGTAATCCAAACAA+TGG 0.629499 4_3:+27708419 None:intergenic
ACAACCAAATATATTAGAGA+TGG 0.630750 4_3:-27707856 Msa0636760:three_prime_UTR
GAGATTAGGAATGTTGGTCA+CGG 0.631846 4_3:-27708510 Msa0636760:CDS
TGAGTCAAGAACTGTTGAGT+CGG 0.633371 4_3:-27708559 Msa0636760:CDS
TACATCGGGGCATCATGCTG+CGG 0.637437 4_3:-27708406 Msa0636760:CDS
TACGATGTGTATAATGACCT+CGG 0.643812 4_3:-27710653 Msa0636760:CDS
AATATCACTACTGAGGTCTG+GGG 0.644415 4_3:-27707451 Msa0636760:three_prime_UTR
GTAACAATGTCTATGTTCCG+AGG 0.644422 4_3:-27710395 Msa0636760:CDS
CCACCAGACGCATAGATCAG+TGG 0.649521 4_3:-27713218 Msa0636760:CDS
ACTCCCTAGAGATGTAATCA+GGG 0.651037 4_3:+27707624 None:intergenic
GTGACCAATTGGATGCAACA+AGG 0.655202 4_3:+27709801 None:intergenic
AAAGATCCAAATGCTCCACA+TGG 0.656155 4_3:-27708687 Msa0636760:CDS
CCATTGTTTGGATTACATCG+GGG 0.657108 4_3:-27708419 Msa0636760:CDS
AAGAAAGAATATCACTACTG+AGG 0.657528 4_3:-27707458 Msa0636760:three_prime_UTR
TAACAATGTCTATGTTCCGA+GGG 0.658588 4_3:-27710394 Msa0636760:CDS
TTACCATCTGAAACACCAGA+AGG 0.662031 4_3:-27710761 Msa0636760:CDS
TCTATTTGAGACACATGTTG+CGG 0.664893 4_3:-27707946 Msa0636760:exon
TTGGCGGAAAGCCAGAATGG+AGG 0.667120 4_3:-27709223 Msa0636760:CDS
ATATCACTACTGAGGTCTGG+GGG 0.673931 4_3:-27707450 Msa0636760:three_prime_UTR
GGTAGCCAGAGTCATGAGCA+AGG 0.680144 4_3:+27709135 None:intergenic
TAAACCAAAAGAAACAAAGG+AGG 0.689233 4_3:-27716446 Msa0636760:CDS
GGCCTACCTGTATCGCAACG+AGG 0.706133 4_3:+27710545 None:intergenic
ACTTGACAAAATATCCAACA+CGG 0.724220 4_3:+27708209 None:intergenic
ATAAAGAATTACAAGCATGG+TGG 0.729305 4_3:-27708536 Msa0636760:CDS
GAGGAACTGAAAACTTTACG+AGG 0.731350 4_3:-27710719 Msa0636760:CDS
TATGACGGTGATGACCGTGT+TGG 0.742214 4_3:-27708223 Msa0636760:CDS
TGTTGGTTGAACAGTAACTG+TGG 0.746011 4_3:+27716335 None:intergenic
GATCGCTGTCTGGATCACCG+AGG 0.820366 4_3:+27710636 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAATAATTTAAATAAA+GGG + chr4_3:27708929-27708948 None:intergenic 0.0%
!! ATATATATATATATATATTA+TGG + chr4_3:27711151-27711170 None:intergenic 0.0%
!! AAATAAAAAAAATAAAAAAA+AGG + chr4_3:27714358-27714377 None:intergenic 0.0%
!!! CATGTTTTTAAAAAAAATTA+GGG - chr4_3:27708370-27708389 Msa0636760:CDS 10.0%
!!! TAATTTTATTTAATTACTAG+AGG - chr4_3:27708602-27708621 Msa0636760:CDS 10.0%
!! TAAATTATTAATTAGAAAGA+TGG + chr4_3:27708841-27708860 None:intergenic 10.0%
!! TAATTAAATCTCATTAAAAT+AGG - chr4_3:27709121-27709140 Msa0636760:CDS 10.0%
!!! AAAAAATGATCAAATATTTT+TGG + chr4_3:27709213-27709232 None:intergenic 10.0%
!!! AATATTTGATCATTTTTTTA+AGG - chr4_3:27709215-27709234 Msa0636760:CDS 10.0%
!!! ATCAATTTTAATATATACAA+TGG + chr4_3:27709282-27709301 None:intergenic 10.0%
!! ATATAGAAAAAAATTGTTTA+AGG - chr4_3:27709747-27709766 Msa0636760:intron 10.0%
!! TATAGAAAAAAATTGTTTAA+GGG - chr4_3:27709748-27709767 Msa0636760:intron 10.0%
!! TTTGTTAATTATTTAATTGT+TGG + chr4_3:27710175-27710194 None:intergenic 10.0%
!!! CAATTAATTTTATTTTTGTT+TGG + chr4_3:27710767-27710786 None:intergenic 10.0%
!! TAACTATTATAAATTGAATT+CGG + chr4_3:27711289-27711308 None:intergenic 10.0%
!!! TAATTGTATAATAATTTTAG+GGG + chr4_3:27712562-27712581 None:intergenic 10.0%
!!! GATAATTGTATAATAATTTT+AGG + chr4_3:27712564-27712583 None:intergenic 10.0%
!!! TAAAATATACTTTTACAAAT+TGG - chr4_3:27712592-27712611 Msa0636760:intron 10.0%
!!! ATTAATTTTACTAAGAAATA+GGG + chr4_3:27713168-27713187 None:intergenic 10.0%
!!! TATTAATTTTACTAAGAAAT+AGG + chr4_3:27713169-27713188 None:intergenic 10.0%
!!! TAATATTTTCTTTTTAACAA+AGG - chr4_3:27714060-27714079 Msa0636760:intron 10.0%
!!! TATAATGTTAAATAAAGTTT+TGG - chr4_3:27716229-27716248 Msa0636760:CDS 10.0%
!!! AAAATATTTTTTTTTATTGG+GGG + chr4_3:27716363-27716382 None:intergenic 10.0%
!!! ATTAGATTTTATAAACAAAA+AGG - chr4_3:27716385-27716404 Msa0636760:CDS 10.0%
!!! TAAAACAAATTTTAATATAC+CGG + chr4_3:27716434-27716453 None:intergenic 10.0%
!!! TGATTGATAATAAAAAAAAA+TGG + chr4_3:27716619-27716638 None:intergenic 10.0%
!! TTAAATAATCCGTAAAAAAT+CGG + chr4_3:27708072-27708091 None:intergenic 15.0%
!!! CCTAATTTTTTTTAAAAACA+TGG + chr4_3:27708372-27708391 None:intergenic 15.0%
!!! CCATGTTTTTAAAAAAAATT+AGG - chr4_3:27708369-27708388 Msa0636760:CDS 15.0%
!!! TATAGAAAAACTTTTTTTTC+AGG + chr4_3:27708763-27708782 None:intergenic 15.0%
!! TATGTATCATATTTATATAC+AGG + chr4_3:27708872-27708891 None:intergenic 15.0%
!! GTTTAAATAAAGGATAAAAA+TGG + chr4_3:27709055-27709074 None:intergenic 15.0%
!!! AATATTTTTGGCAAATAATA+AGG + chr4_3:27709201-27709220 None:intergenic 15.0%
!! TTCATTAGCAATATTATAAA+AGG - chr4_3:27709379-27709398 Msa0636760:CDS 15.0%
!! CAATATTATCTATACTATAT+GGG + chr4_3:27709821-27709840 None:intergenic 15.0%
!! ACAATATTATCTATACTATA+TGG + chr4_3:27709822-27709841 None:intergenic 15.0%
!! ACAAAATAAAAGATTATGAA+AGG + chr4_3:27710524-27710543 None:intergenic 15.0%
!!! TTTTATTTTGTGTTTTGATT+TGG - chr4_3:27710533-27710552 Msa0636760:intron 15.0%
!!! TTAATTGACCTTTTTTTTTT+AGG - chr4_3:27710780-27710799 Msa0636760:intron 15.0%
!!! TAATTGACCTTTTTTTTTTA+GGG - chr4_3:27710781-27710800 Msa0636760:intron 15.0%
!! ATTAATTCCCTAAAAAAAAA+AGG + chr4_3:27710791-27710810 None:intergenic 15.0%
!! TTTGATCAAATTATTCAAAT+TGG - chr4_3:27711395-27711414 Msa0636760:intron 15.0%
!!! TTGTGACATTTAATTTATTT+TGG - chr4_3:27711767-27711786 Msa0636760:intron 15.0%
!!! TGTGACATTTAATTTATTTT+GGG - chr4_3:27711768-27711787 Msa0636760:intron 15.0%
!!! AAGTATTGTCATAAAATTAT+TGG - chr4_3:27712313-27712332 Msa0636760:intron 15.0%
!! AGTATTGTCATAAAATTATT+GGG - chr4_3:27712314-27712333 Msa0636760:intron 15.0%
!! ATTTATTCATTAACAAAATG+TGG - chr4_3:27712952-27712971 Msa0636760:intron 15.0%
!!! TTAATTTTACTAAGAAATAG+GGG + chr4_3:27713167-27713186 None:intergenic 15.0%
!!! CATTTAACATGTAAATTTTT+TGG + chr4_3:27713230-27713249 None:intergenic 15.0%
!! TTGGAATTAATAATTTAACT+CGG - chr4_3:27713660-27713679 Msa0636760:intron 15.0%
!! TGTATATGAAATTAATGATA+GGG + chr4_3:27714093-27714112 None:intergenic 15.0%
!! TTGTATATGAAATTAATGAT+AGG + chr4_3:27714094-27714113 None:intergenic 15.0%
!! AAATAAAAAAAAGGTAACAT+AGG + chr4_3:27714349-27714368 None:intergenic 15.0%
!! AGTATACTTTCAAATAAAAT+TGG + chr4_3:27714390-27714409 None:intergenic 15.0%
!!! ATGATTTTATTTTTTTGACT+TGG + chr4_3:27715086-27715105 None:intergenic 15.0%
!!! AAAACAAATTTTAATATACC+GGG + chr4_3:27716433-27716452 None:intergenic 15.0%
!! CACCTAAAAATAAAAATTAT+TGG - chr4_3:27716459-27716478 Msa0636760:CDS 15.0%
!!! GTCCAATAATTTTTATTTTT+AGG + chr4_3:27716464-27716483 None:intergenic 15.0%
!! AAAAATAAAAATTATTGGAC+CGG - chr4_3:27716464-27716483 Msa0636760:CDS 15.0%
!!! TTTTTTTTCCTAAAGCAATA+AGG - chr4_3:27708041-27708060 Msa0636760:CDS 20.0%
!! TTGAAGAAAACTACATTTAA+GGG + chr4_3:27708481-27708500 None:intergenic 20.0%
!! TTTGAAGAAAACTACATTTA+AGG + chr4_3:27708482-27708501 None:intergenic 20.0%
!! TATAGAAAGAGATATCAATT+TGG - chr4_3:27708679-27708698 Msa0636760:CDS 20.0%
!! ATCATATTTATATACAGGTA+TGG + chr4_3:27708867-27708886 None:intergenic 20.0%
!! AATATTATCTAATTGTTGTG+TGG + chr4_3:27709152-27709171 None:intergenic 20.0%
!! ATAAAGAGGATATATCAATT+TGG + chr4_3:27709470-27709489 None:intergenic 20.0%
!! TAACGCGTATAAATTATTAA+CGG - chr4_3:27709553-27709572 Msa0636760:intron 20.0%
!!! AAGATAAACATAGTCTTTTT+GGG + chr4_3:27709658-27709677 None:intergenic 20.0%
!!! AAAGATAAACATAGTCTTTT+TGG + chr4_3:27709659-27709678 None:intergenic 20.0%
!! ATTACTAACATTATCAACAT+TGG - chr4_3:27709973-27709992 Msa0636760:intron 20.0%
!! ATATTCATAACTATCAACAT+TGG - chr4_3:27710095-27710114 Msa0636760:intron 20.0%
!! CAAAATAAGTTCAATTCAAA+CGG - chr4_3:27710438-27710457 Msa0636760:intron 20.0%
!! AAAATAAGTTCAATTCAAAC+GGG - chr4_3:27710439-27710458 Msa0636760:intron 20.0%
!! TGTTAGATTATAATTATTCG+TGG - chr4_3:27710581-27710600 Msa0636760:CDS 20.0%
!! TATATATATATTATGGAGCT+GGG + chr4_3:27711144-27711163 None:intergenic 20.0%
!! ATATATATATATTATGGAGC+TGG + chr4_3:27711145-27711164 None:intergenic 20.0%
!! TTAAGAGACTTAAAAAAGTA+GGG + chr4_3:27711625-27711644 None:intergenic 20.0%
!! ATTAAGAGACTTAAAAAAGT+AGG + chr4_3:27711626-27711645 None:intergenic 20.0%
!!! GTGACATTTAATTTATTTTG+GGG - chr4_3:27711769-27711788 Msa0636760:intron 20.0%
!!! TGAATCATTGGTTATTTTAT+GGG - chr4_3:27711880-27711899 Msa0636760:intron 20.0%
!!! GCAAATTTTCTAAAAAGAAA+TGG + chr4_3:27711944-27711963 None:intergenic 20.0%
!!! ATTTTATGACAATACTTTAG+AGG + chr4_3:27712310-27712329 None:intergenic 20.0%
!! GTATTGTCATAAAATTATTG+GGG - chr4_3:27712315-27712334 Msa0636760:intron 20.0%
!! ACTAACAAAGTCTATATTTA+AGG - chr4_3:27712460-27712479 Msa0636760:intron 20.0%
!! ATGTCATGTACTTATTTAAT+TGG - chr4_3:27713068-27713087 Msa0636760:CDS 20.0%
!!! TAATTTTACTAAGAAATAGG+GGG + chr4_3:27713166-27713185 None:intergenic 20.0%
!! GTATATGAAATTAATGATAG+GGG + chr4_3:27714092-27714111 None:intergenic 20.0%
!! TATTTGAATTTACTCATCAA+TGG - chr4_3:27714204-27714223 Msa0636760:intron 20.0%
!! ATTTGAATTTACTCATCAAT+GGG - chr4_3:27714205-27714224 Msa0636760:intron 20.0%
!!! AAGAGGTATGTTTTTATTTA+AGG - chr4_3:27714566-27714585 Msa0636760:intron 20.0%
!!! AGAGGTATGTTTTTATTTAA+GGG - chr4_3:27714567-27714586 Msa0636760:intron 20.0%
!! AGTTAGTACCATTAAATAAA+GGG + chr4_3:27714632-27714651 None:intergenic 20.0%
!! TAGTTAGTACCATTAAATAA+AGG + chr4_3:27714633-27714652 None:intergenic 20.0%
!! AAATGAAACAATTCAATTAC+AGG - chr4_3:27714694-27714713 Msa0636760:intron 20.0%
!! ACAAAAGTGAAAATCAATTA+AGG + chr4_3:27715120-27715139 None:intergenic 20.0%
!!! AATCTTCTATTGTTAGTTTT+AGG + chr4_3:27715450-27715469 None:intergenic 20.0%
!!! TCATCATTTGTTTTCAAATT+AGG + chr4_3:27715652-27715671 None:intergenic 20.0%
!! AAGTTGGATTGAATATAATT+TGG + chr4_3:27716286-27716305 None:intergenic 20.0%
!!! AATGATTAACCATTTTTTCA+TGG + chr4_3:27716592-27716611 None:intergenic 20.0%
!!! TTCTTTTGGTTTATGAACAA+AGG + chr4_3:27707658-27707677 None:intergenic 25.0%
! TCATAAACCAAAAGAAACAA+AGG - chr4_3:27707662-27707681 Msa0636760:three_prime_UTR 25.0%
!! AATTGATTTACCCAACAAAT+CGG + chr4_3:27707854-27707873 None:intergenic 25.0%
!!! TTAACTTTGGAATTTAGGTT+GGG - chr4_3:27707919-27707938 Msa0636760:three_prime_UTR 25.0%
!!! CATTTTAAGCTGTTTTTAAC+TGG + chr4_3:27708415-27708434 None:intergenic 25.0%
! CTATATATTCAGTGAATGTT+TGG + chr4_3:27708547-27708566 None:intergenic 25.0%
! ACATTCACTGAATATATAGT+TGG - chr4_3:27708548-27708567 Msa0636760:CDS 25.0%
! AAATAAGCACAGTAGAAAAA+CGG + chr4_3:27708656-27708675 None:intergenic 25.0%
! AGTGTTATATAGTGTTCTTA+TGG - chr4_3:27708782-27708801 Msa0636760:CDS 25.0%
! TGGTTAAATCTCACTAAAAT+AGG + chr4_3:27708821-27708840 None:intergenic 25.0%
!! AAATATGATACATAGCTTTG+TGG - chr4_3:27708878-27708897 Msa0636760:CDS 25.0%
! TAATCAGCAATCTACATAAA+TGG - chr4_3:27709309-27709328 Msa0636760:CDS 25.0%
! TAGGTAGTAGTAATATAAAG+AGG + chr4_3:27709484-27709503 None:intergenic 25.0%
! TTACTACTACCTAAAAAAAG+AGG - chr4_3:27709491-27709510 Msa0636760:intron 25.0%
! ATTATCTATACTATATGGGA+AGG + chr4_3:27709817-27709836 None:intergenic 25.0%
!! AACATTATCAACATTGGTTA+CGG - chr4_3:27709979-27709998 Msa0636760:intron 25.0%
!! TCATTTTACGTTCTAATAAG+AGG + chr4_3:27710024-27710043 None:intergenic 25.0%
!! ATAACTATCAACATTGGTTA+CGG - chr4_3:27710101-27710120 Msa0636760:intron 25.0%
!! TCATTTTACGTTCTAATAAG+AGG + chr4_3:27710024-27710043 None:intergenic 25.0%
! AAATAAGTTCAATTCAAACG+GGG - chr4_3:27710440-27710459 Msa0636760:intron 25.0%
!!! ACGTCAATTTTAGCATATAT+TGG + chr4_3:27710734-27710753 None:intergenic 25.0%
! GGGAAAAATACAAGTAATTA+AGG + chr4_3:27710817-27710836 None:intergenic 25.0%
!!! TTGTATTTTTCCCTTGTTTT+TGG - chr4_3:27710824-27710843 Msa0636760:intron 25.0%
!! TCTTTTTGAACCAAAAACAA+GGG + chr4_3:27710837-27710856 None:intergenic 25.0%
! ATAAAGCAAATTGTTCTTGA+TGG - chr4_3:27711011-27711030 Msa0636760:intron 25.0%
!! TCAATTTTTCTTGTGAATCA+TGG - chr4_3:27711051-27711070 Msa0636760:intron 25.0%
!! CAATTTTTCTTGTGAATCAT+GGG - chr4_3:27711052-27711071 Msa0636760:intron 25.0%
!! TTCTTTATGAGCATTTTATC+TGG - chr4_3:27711716-27711735 Msa0636760:intron 25.0%
! TGTATGGCTATCAATTTATA+CGG + chr4_3:27711851-27711870 None:intergenic 25.0%
! TGATTCACAAAAAAACTGTA+TGG + chr4_3:27711867-27711886 None:intergenic 25.0%
!!! ACAGTTTTTTTGTGAATCAT+TGG - chr4_3:27711868-27711887 Msa0636760:intron 25.0%
!!! GTGAATCATTGGTTATTTTA+TGG - chr4_3:27711879-27711898 Msa0636760:intron 25.0%
!!! TTGGTTATTTTATGGGTTTT+TGG - chr4_3:27711887-27711906 Msa0636760:intron 25.0%
!!! TTTTTTTTTAAGGAAAGCCT+AGG - chr4_3:27712137-27712156 Msa0636760:intron 25.0%
! TTTACAAATTGGAAAACTTG+AGG - chr4_3:27712603-27712622 Msa0636760:intron 25.0%
! TGTTAATCTTTCAATTCTCT+AGG + chr4_3:27712679-27712698 None:intergenic 25.0%
! AAAAAAACTTAGAGTGTGTT+TGG - chr4_3:27712713-27712732 Msa0636760:intron 25.0%
! TGTAATGTAATGTAATGTTG+AGG - chr4_3:27712818-27712837 Msa0636760:intron 25.0%
! AATAAGTACATGACATTGAT+AGG + chr4_3:27713064-27713083 None:intergenic 25.0%
!!! CACGTACAATTTTAATTATG+AGG - chr4_3:27713260-27713279 Msa0636760:intron 25.0%
! TCGTTAAAAGAAAATTGTGT+TGG - chr4_3:27713641-27713660 Msa0636760:intron 25.0%
! AGTTAAATCCTTCATTGAAA+AGG + chr4_3:27713882-27713901 None:intergenic 25.0%
! AAACTTGACCCTAAAATTTA+TGG - chr4_3:27714478-27714497 Msa0636760:intron 25.0%
!! TAGCATTTCCCTTTATTTAA+TGG - chr4_3:27714621-27714640 Msa0636760:intron 25.0%
!!! ATTGATTTTCACTTTTGTTC+AGG - chr4_3:27715122-27715141 Msa0636760:intron 25.0%
!! AACTATTACTTCCACATTTT+AGG - chr4_3:27715221-27715240 Msa0636760:intron 25.0%
!!! AAATGATGGTCTTATTCTTT+GGG - chr4_3:27715480-27715499 Msa0636760:intron 25.0%
! ACAACCAAATATATTAGAGA+TGG - chr4_3:27716255-27716274 Msa0636760:CDS 25.0%
! CATACCATCTCTAATATATT+TGG + chr4_3:27716262-27716281 None:intergenic 25.0%
! TAACTCATTCCATGAAATAA+TGG - chr4_3:27716552-27716571 Msa0636760:CDS 25.0%
! CATTTCATTCCATTATTTCA+TGG + chr4_3:27716564-27716583 None:intergenic 25.0%
! AATGAGAAACCATGAAAAAA+TGG - chr4_3:27716580-27716599 Msa0636760:exon 25.0%
AAAGAGAAGTTATGAGAAGA+GGG + chr4_3:27707480-27707499 None:intergenic 30.0%
TCTTTCTGCAAGAGTTAAAA+GGG - chr4_3:27707495-27707514 Msa0636760:three_prime_UTR 30.0%
TTGTTCAAGATGAGACAATT+TGG + chr4_3:27707577-27707596 None:intergenic 30.0%
! AACCAAACATGTTTTCATGT+TGG - chr4_3:27707622-27707641 Msa0636760:three_prime_UTR 30.0%
ATCCAACATGAAAACATGTT+TGG + chr4_3:27707627-27707646 None:intergenic 30.0%
TAAACCAAAAGAAACAAAGG+AGG - chr4_3:27707665-27707684 Msa0636760:three_prime_UTR 30.0%
!! CACTCTTAACTTTGGAATTT+AGG - chr4_3:27707914-27707933 Msa0636760:three_prime_UTR 30.0%
!! CTTAACTTTGGAATTTAGGT+TGG - chr4_3:27707918-27707937 Msa0636760:three_prime_UTR 30.0%
ATATAGTGTTCTTATGGTAG+TGG - chr4_3:27708788-27708807 Msa0636760:CDS 30.0%
!! AAATGTGACACATAGTTTTG+TGG - chr4_3:27709016-27709035 Msa0636760:intron 30.0%
CGTTAGCGCAATAAAAAAAA+CGG + chr4_3:27709538-27709557 None:intergenic 30.0%
AATAAGAGGAATTGCTCATT+TGG + chr4_3:27710010-27710029 None:intergenic 30.0%
AATAAGAGGAATTGCTCATT+TGG + chr4_3:27710010-27710029 None:intergenic 30.0%
TTTCTTACTTCTACCAGATA+AGG + chr4_3:27710683-27710702 None:intergenic 30.0%
! CTCTTTTTGAACCAAAAACA+AGG + chr4_3:27710838-27710857 None:intergenic 30.0%
GGTTCAAAAAGAGACAAAAT+TGG - chr4_3:27710845-27710864 Msa0636760:intron 30.0%
AAAAGAGACAAAATTGGAGA+AGG - chr4_3:27710851-27710870 Msa0636760:intron 30.0%
GATTCACAAGAAAAATTGAC+AGG + chr4_3:27711050-27711069 None:intergenic 30.0%
GGATAATGATGAAACCTTAT+TGG + chr4_3:27711123-27711142 None:intergenic 30.0%
ACATCAATGTCTAACACAAA+TGG - chr4_3:27711229-27711248 Msa0636760:intron 30.0%
GTTATTGTCTGTCTAAACAT+AGG - chr4_3:27711502-27711521 Msa0636760:intron 30.0%
! GATGTCATTTAAATCTCACT+TGG - chr4_3:27711561-27711580 Msa0636760:intron 30.0%
TTTAAATCTCACTTGGAACT+AGG - chr4_3:27711568-27711587 Msa0636760:intron 30.0%
TTAAATCTCACTTGGAACTA+GGG - chr4_3:27711569-27711588 Msa0636760:intron 30.0%
AAAAGTAGGGCTTGAAATTT+AGG + chr4_3:27711612-27711631 None:intergenic 30.0%
TTATACGGCTCTTCAAAATT+TGG + chr4_3:27711836-27711855 None:intergenic 30.0%
!!! TACTCTACTGTTTTTTTGAC+AGG + chr4_3:27712013-27712032 None:intergenic 30.0%
!!! GTTTTTTTTTTCCCTTTGAC+AGG + chr4_3:27712047-27712066 None:intergenic 30.0%
AAAAAACAGTGTAGTACAAG+TGG - chr4_3:27712067-27712086 Msa0636760:intron 30.0%
GACTTTGTTAGTCAATTTCA+GGG + chr4_3:27712452-27712471 None:intergenic 30.0%
AGACTTTGTTAGTCAATTTC+AGG + chr4_3:27712453-27712472 None:intergenic 30.0%
TTGAGGTGAATTTCATTGTT+TGG - chr4_3:27712786-27712805 Msa0636760:intron 30.0%
AATTTGTCCAATAGTGTGTT+TGG + chr4_3:27712929-27712948 None:intergenic 30.0%
!!! GATTTTGATTGATGTCAAGA+TGG - chr4_3:27712992-27713011 Msa0636760:intron 30.0%
CAAAAGAGAAGAATTGATCA+GGG + chr4_3:27713319-27713338 None:intergenic 30.0%
TCAAAAGAGAAGAATTGATC+AGG + chr4_3:27713320-27713339 None:intergenic 30.0%
ATTGATAAGGTTAAGAGAAG+AGG - chr4_3:27713373-27713392 Msa0636760:intron 30.0%
TAACTCTTAGGTATAGTGTT+AGG + chr4_3:27713590-27713609 None:intergenic 30.0%
!!! TTTTTAGGATGCTAACTCTT+AGG + chr4_3:27713602-27713621 None:intergenic 30.0%
! TTTAACACTGCTGCATTTTT+AGG + chr4_3:27713617-27713636 None:intergenic 30.0%
! TTACTTCTTTTCTCAGACAA+CGG + chr4_3:27713700-27713719 None:intergenic 30.0%
TTCAGCAAATACCTTACAAT+CGG - chr4_3:27713774-27713793 Msa0636760:intron 30.0%
TTCATTGAAAAGGTCATCTA+TGG + chr4_3:27713872-27713891 None:intergenic 30.0%
! ATAGATGACCTTTTCAATGA+AGG - chr4_3:27713871-27713890 Msa0636760:intron 30.0%
AAATATCTTACTGTCCATTG+TGG + chr4_3:27714007-27714026 None:intergenic 30.0%
TAAAAGTTAGTTACGCTAGT+TGG + chr4_3:27714142-27714161 None:intergenic 30.0%
!!! CAAAATTTTTTGTGTCGTGT+AGG - chr4_3:27714438-27714457 Msa0636760:intron 30.0%
! GTACAACTTCTTCTGTTTTA+TGG + chr4_3:27714720-27714739 None:intergenic 30.0%
AGAAAAAATCGTAGTAGTCT+AGG + chr4_3:27714745-27714764 None:intergenic 30.0%
TATGAAAGAATAAACCGTCT+TGG - chr4_3:27715019-27715038 Msa0636760:intron 30.0%
! CTGTTTGTTGCTATAATGTA+AGG + chr4_3:27715172-27715191 None:intergenic 30.0%
! GGAAGTAATAGTTTGTAGAT+TGG + chr4_3:27715214-27715233 None:intergenic 30.0%
AAATTGCCAATGCTTATCAT+AGG + chr4_3:27715356-27715375 None:intergenic 30.0%
TAAGACCATCATTTGCATAA+GGG + chr4_3:27715474-27715493 None:intergenic 30.0%
ATAAGACCATCATTTGCATA+AGG + chr4_3:27715475-27715494 None:intergenic 30.0%
!! CAAATGATGGTCTTATTCTT+TGG - chr4_3:27715479-27715498 Msa0636760:intron 30.0%
! TTTGGGATACTATCAAATCT+TGG - chr4_3:27715497-27715516 Msa0636760:intron 30.0%
TTGGGATACTATCAAATCTT+GGG - chr4_3:27715498-27715517 Msa0636760:intron 30.0%
TTGACTCATTGTTATAGTAG+TGG + chr4_3:27715540-27715559 None:intergenic 30.0%
ATAAAGAATTACAAGCATGG+TGG - chr4_3:27715575-27715594 Msa0636760:intron 30.0%
! TGGATATTTTCCTAATAGAC+CGG - chr4_3:27715753-27715772 Msa0636760:intron 30.0%
ACTTGACAAAATATCCAACA+CGG + chr4_3:27715905-27715924 None:intergenic 30.0%
! TCAAAAGCAGCTTTAATCAT+CGG + chr4_3:27715985-27716004 None:intergenic 30.0%
!! CTGCTTTTGAAAAGTTCAAA+GGG - chr4_3:27715995-27716014 Msa0636760:intron 30.0%
! TTGAAGGTATAATAGATGAG+AGG - chr4_3:27716031-27716050 Msa0636760:intron 30.0%
TCTATTCCTGAACTTCATAT+TGG + chr4_3:27716061-27716080 None:intergenic 30.0%
ATGAAGTTCAGGAATAGAAA+TGG - chr4_3:27716063-27716082 Msa0636760:intron 30.0%
TCTCAAATAGAGACACTATA+TGG + chr4_3:27716156-27716175 None:intergenic 30.0%
ATAGTGTAATGAAGGCTAAA+TGG + chr4_3:27716515-27716534 None:intergenic 30.0%
AAGAAAGAATATCACTACTG+AGG - chr4_3:27716653-27716672 Msa0636760:five_prime_UTR 30.0%
GAACGTACATTGTTTACAGT+CGG + chr4_3:27707434-27707453 None:intergenic 35.0%
GAAAGAGAAGTTATGAGAAG+AGG + chr4_3:27707481-27707500 None:intergenic 35.0%
CTCTTTCTGCAAGAGTTAAA+AGG - chr4_3:27707494-27707513 Msa0636760:three_prime_UTR 35.0%
TTTGGTTACTTCCAATACCA+TGG + chr4_3:27707609-27707628 None:intergenic 35.0%
!! ACAACCTCCTTTGTTTCTTT+TGG + chr4_3:27707672-27707691 None:intergenic 35.0%
AGAAACAAAGGAGGTTGTTT+AGG - chr4_3:27707674-27707693 Msa0636760:three_prime_UTR 35.0%
TCAGAAATGGCTATAGAAAG+AGG - chr4_3:27707814-27707833 Msa0636760:three_prime_UTR 35.0%
CAGAAATGGCTATAGAAAGA+GGG - chr4_3:27707815-27707834 Msa0636760:three_prime_UTR 35.0%
!! TGATGACATAACCGATTTGT+TGG - chr4_3:27707840-27707859 Msa0636760:three_prime_UTR 35.0%
!! GATGACATAACCGATTTGTT+GGG - chr4_3:27707841-27707860 Msa0636760:three_prime_UTR 35.0%
GTTGGGTAAATCAATTCTCT+TGG - chr4_3:27707858-27707877 Msa0636760:three_prime_UTR 35.0%
AAAGTTAAGAGTGACTTACC+GGG + chr4_3:27707907-27707926 None:intergenic 35.0%
CAAAGTTAAGAGTGACTTAC+CGG + chr4_3:27707908-27707927 None:intergenic 35.0%
!!! AAGGCAATGCCGATTTTTTA+CGG - chr4_3:27708060-27708079 Msa0636760:CDS 35.0%
AAAAATGCCACTACAAACGT+GGG - chr4_3:27708291-27708310 Msa0636760:CDS 35.0%
TCAGTGAATGTTTGGATTGA+AGG + chr4_3:27708539-27708558 None:intergenic 35.0%
!!! GTGAGTACTCCTCTTTTTTT+AGG + chr4_3:27709503-27709522 None:intergenic 35.0%
TACTATATGGGAAGGAGATA+GGG + chr4_3:27709809-27709828 None:intergenic 35.0%
ATACTATATGGGAAGGAGAT+AGG + chr4_3:27709810-27709829 None:intergenic 35.0%
!!! TACATCGAGTGTCATTTTGT+TGG + chr4_3:27710466-27710485 None:intergenic 35.0%
TAAGTACAAGATGTGACAAG+AGG + chr4_3:27710607-27710626 None:intergenic 35.0%
TTAACCTCATATGCCTTATC+TGG - chr4_3:27710667-27710686 Msa0636760:CDS 35.0%
!!! TAGCAGAACGTTGTTTTTCT+AGG - chr4_3:27710705-27710724 Msa0636760:CDS 35.0%
!!! AGCAGAACGTTGTTTTTCTA+GGG - chr4_3:27710706-27710725 Msa0636760:CDS 35.0%
!! TTTGAAGTACCAGGAAGTTT+TGG - chr4_3:27710939-27710958 Msa0636760:intron 35.0%
TTGTGGAAAATGAGCATAGA+AGG - chr4_3:27710979-27710998 Msa0636760:intron 35.0%
TGTGGAAAATGAGCATAGAA+GGG - chr4_3:27710980-27710999 Msa0636760:intron 35.0%
AAATGACCCTCTTATCATCA+GGG + chr4_3:27711097-27711116 None:intergenic 35.0%
AAAATGACCCTCTTATCATC+AGG + chr4_3:27711098-27711117 None:intergenic 35.0%
!!! GAGGGTCATTTTTTCCAATA+AGG - chr4_3:27711106-27711125 Msa0636760:intron 35.0%
TAGACAGACAATAACACTCA+TGG + chr4_3:27711497-27711516 None:intergenic 35.0%
AAACAGTAGAGTAGTACAAG+TGG - chr4_3:27712020-27712039 Msa0636760:intron 35.0%
!! GTCACGTTTTAAACAATCCT+AGG + chr4_3:27712157-27712176 None:intergenic 35.0%
TCAGGGACTAAAATGACTAA+CGG + chr4_3:27712435-27712454 None:intergenic 35.0%
TTTGCAATTTCTCTGCATTC+AGG - chr4_3:27712488-27712507 Msa0636760:intron 35.0%
TTGCAATTTCTCTGCATTCA+GGG - chr4_3:27712489-27712508 Msa0636760:intron 35.0%
! TTCTCTAGGAAAAGAGACTT+TGG + chr4_3:27712665-27712684 None:intergenic 35.0%
AACTTAGAGTGTGTTTGGAT+TGG - chr4_3:27712718-27712737 Msa0636760:intron 35.0%
ACTTAGAGTGTGTTTGGATT+GGG - chr4_3:27712719-27712738 Msa0636760:intron 35.0%
GAGGGAATTCAAATACTTTG+AGG - chr4_3:27712769-27712788 Msa0636760:intron 35.0%
TGAGGAAATGTAATGCTATG+AGG - chr4_3:27712836-27712855 Msa0636760:intron 35.0%
GAGGAAATGTAATGCTATGA+GGG - chr4_3:27712837-27712856 Msa0636760:intron 35.0%
GAGGGAATTCAAATACTTTG+AGG - chr4_3:27712769-27712788 Msa0636760:intron 35.0%
TGTGTTTGGATGAGGTAATT+TGG + chr4_3:27712915-27712934 None:intergenic 35.0%
! GAAATCTCACTTGGTGAAAT+TGG + chr4_3:27713142-27713161 None:intergenic 35.0%
AAACACCAGAAGGATTGATA+AGG - chr4_3:27713360-27713379 Msa0636760:intron 35.0%
CTTAACCTTATCAATCCTTC+TGG + chr4_3:27713368-27713387 None:intergenic 35.0%
TACGATGTGTATAATGACCT+CGG - chr4_3:27713458-27713477 Msa0636760:intron 35.0%
! AAGAACAGGTCGTTTAAGTT+CGG + chr4_3:27713501-27713520 None:intergenic 35.0%
TAACAATGTCTATGTTCCGA+GGG - chr4_3:27713717-27713736 Msa0636760:intron 35.0%
! GAGTTGCTTTAATTCTGAGA+AGG + chr4_3:27713749-27713768 None:intergenic 35.0%
TGAATTTACTCATCAATGGG+TGG - chr4_3:27714208-27714227 Msa0636760:intron 35.0%
AATGGGTGGTGATTTGAATA+TGG - chr4_3:27714222-27714241 Msa0636760:intron 35.0%
!!! AGGACAGATTCTTTTGGTTT+AGG - chr4_3:27714248-27714267 Msa0636760:intron 35.0%
!!! GGACAGATTCTTTTGGTTTA+GGG - chr4_3:27714249-27714268 Msa0636760:intron 35.0%
TGGTTTAGGGATGAAGAATT+TGG - chr4_3:27714262-27714281 Msa0636760:intron 35.0%
TAATCCTTGTTGCATCCAAT+TGG - chr4_3:27714306-27714325 Msa0636760:intron 35.0%
!!! TTTTTTGTGTCGTGTAGGAA+TGG - chr4_3:27714443-27714462 Msa0636760:intron 35.0%
! CAGCAGGACCATAAATTTTA+GGG + chr4_3:27714489-27714508 None:intergenic 35.0%
! TCAGCAGGACCATAAATTTT+AGG + chr4_3:27714490-27714509 None:intergenic 35.0%
TTGTTGCTCAATCATTTCAG+TGG + chr4_3:27714524-27714543 None:intergenic 35.0%
ATGATTGAGCAACAAATCAG+AGG - chr4_3:27714529-27714548 Msa0636760:intron 35.0%
! CTTGAAGGCACAACATTATA+TGG - chr4_3:27714791-27714810 Msa0636760:intron 35.0%
GCACAACATTATATGGATCA+AGG - chr4_3:27714798-27714817 Msa0636760:intron 35.0%
!! TCCACATTTTAGGTACACAA+TGG - chr4_3:27715231-27715250 Msa0636760:intron 35.0%
TCCATTGTGTACCTAAAATG+TGG + chr4_3:27715235-27715254 None:intergenic 35.0%
! GAAGCACTTATAAATGCAGA+TGG - chr4_3:27715274-27715293 Msa0636760:intron 35.0%
CAATAGCCTATGATAAGCAT+TGG - chr4_3:27715347-27715366 Msa0636760:intron 35.0%
ATGAATGAGGTCATTTGGTA+GGG + chr4_3:27715389-27715408 None:intergenic 35.0%
TATGAATGAGGTCATTTGGT+AGG + chr4_3:27715390-27715409 None:intergenic 35.0%
!!! ATTGTTAGTTTTAGGCCATG+TGG + chr4_3:27715442-27715461 None:intergenic 35.0%
GATTACCCTTATGCAAATGA+TGG - chr4_3:27715466-27715485 Msa0636760:intron 35.0%
CGGATAAAGAATTACAAGCA+TGG - chr4_3:27715572-27715591 Msa0636760:intron 35.0%
TGGTATGAGATTAGGAATGT+TGG - chr4_3:27715595-27715614 Msa0636760:intron 35.0%
ACAAAAAAGATGAACCTTGG+TGG - chr4_3:27715626-27715645 Msa0636760:intron 35.0%
AAATAGTGACGACCATTGTT+TGG - chr4_3:27715680-27715699 Msa0636760:intron 35.0%
GACCATTGTTTGGATTACAT+CGG - chr4_3:27715690-27715709 Msa0636760:intron 35.0%
ACCATTGTTTGGATTACATC+GGG - chr4_3:27715691-27715710 Msa0636760:intron 35.0%
!! GGAACTTTTCTTTGAGAAAC+CGG - chr4_3:27715825-27715844 Msa0636760:intron 35.0%
TCATAGCTTGAATTTGCGAA+GGG + chr4_3:27715873-27715892 None:intergenic 35.0%
TTCGCAAATTCAAGCTATGA+CGG - chr4_3:27715873-27715892 Msa0636760:intron 35.0%
! TATTTTGTCAAGTCATTCGC+CGG - chr4_3:27715912-27715931 Msa0636760:intron 35.0%
!!! GCTGCTTTTGAAAAGTTCAA+AGG - chr4_3:27715994-27716013 Msa0636760:intron 35.0%
!! CTTTTGAAAAGTTCAAAGGG+AGG - chr4_3:27715998-27716017 Msa0636760:intron 35.0%
! TCTATTTGAGACACATGTTG+CGG - chr4_3:27716165-27716184 Msa0636760:intron 35.0%
ATCCAACTTGATTACATCCA+AGG - chr4_3:27716297-27716316 Msa0636760:CDS 35.0%
TCCAACTTGATTACATCCAA+GGG - chr4_3:27716298-27716317 Msa0636760:CDS 35.0%
! GTCACTAAAGTCTTCGTTTT+AGG - chr4_3:27716336-27716355 Msa0636760:CDS 35.0%
! GTCTCATATGTCGACTAAAA+AGG - chr4_3:27716407-27716426 Msa0636760:CDS 35.0%
TTGCTAGCATAGTGTAATGA+AGG + chr4_3:27716523-27716542 None:intergenic 35.0%
GAGAAGTTATGGTTATGGGA+TGG + chr4_3:27707456-27707475 None:intergenic 40.0%
GGGAGAGAAGTTATGGTTAT+GGG + chr4_3:27707460-27707479 None:intergenic 40.0%
AGGGAGAGAAGTTATGGTTA+TGG + chr4_3:27707461-27707480 None:intergenic 40.0%
! GTTTTCATGTTGGATCGTCA+AGG - chr4_3:27707632-27707651 Msa0636760:three_prime_UTR 40.0%
AACAAAGGAGGTTGTTTAGG+AGG - chr4_3:27707677-27707696 Msa0636760:three_prime_UTR 40.0%
! TGTTGGTTGAACAGTAACTG+TGG + chr4_3:27707779-27707798 None:intergenic 40.0%
GTTACTGTTCAACCAACAGT+TGG - chr4_3:27707781-27707800 Msa0636760:three_prime_UTR 40.0%
! TGGAGGACTTTTCTCAGAAA+TGG - chr4_3:27707801-27707820 Msa0636760:three_prime_UTR 40.0%
CGGTAAGTCACTCTTAACTT+TGG - chr4_3:27707906-27707925 Msa0636760:three_prime_UTR 40.0%
CAAAAATGCCACTACAAACG+TGG - chr4_3:27708290-27708309 Msa0636760:CDS 40.0%
!!! TGTGACACATAGTTTTGTGG+TGG - chr4_3:27709019-27709038 Msa0636760:intron 40.0%
ATAGAAAGAGCAAGAGCAAG+AGG - chr4_3:27709440-27709459 Msa0636760:intron 40.0%
TCTACCAGATAAGGCATATG+AGG + chr4_3:27710674-27710693 None:intergenic 40.0%
!!! GCAGAACGTTGTTTTTCTAG+GGG - chr4_3:27710707-27710726 Msa0636760:CDS 40.0%
GAGACAAAATTGGAGAAGGA+AGG - chr4_3:27710855-27710874 Msa0636760:intron 40.0%
TTGGAGAAGGAAGGAATCAA+AGG - chr4_3:27710864-27710883 Msa0636760:intron 40.0%
! GAAGCTGAATTTGAAGTACC+AGG - chr4_3:27710930-27710949 Msa0636760:intron 40.0%
CCAATATCTCCAAAACTTCC+TGG + chr4_3:27710951-27710970 None:intergenic 40.0%
!!! CCAGGAAGTTTTGGAGATAT+TGG - chr4_3:27710948-27710967 Msa0636760:intron 40.0%
AGATATTGGTGCAGTTCTTG+TGG - chr4_3:27710962-27710981 Msa0636760:intron 40.0%
ATGACAACCCTGATGATAAG+AGG - chr4_3:27711087-27711106 Msa0636760:intron 40.0%
TGACAACCCTGATGATAAGA+GGG - chr4_3:27711088-27711107 Msa0636760:intron 40.0%
TAGTTTGATCCCGAGTTTGT+TGG - chr4_3:27711804-27711823 Msa0636760:intron 40.0%
TTGGTTTCCACCAACAAACT+CGG + chr4_3:27711817-27711836 None:intergenic 40.0%
AACAGTGTAGTACAAGTGGT+CGG - chr4_3:27712071-27712090 Msa0636760:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+AGG - chr4_3:27712342-27712361 Msa0636760:intron 40.0%
GACGACTCATTTCCTATTCA+GGG + chr4_3:27712357-27712376 None:intergenic 40.0%
TGACGACTCATTTCCTATTC+AGG + chr4_3:27712358-27712377 None:intergenic 40.0%
ACTAACGAAGTCTGCATTCA+GGG + chr4_3:27712388-27712407 None:intergenic 40.0%
! TGACTACTCTTTTCCCATTC+AGG - chr4_3:27712519-27712538 Msa0636760:intron 40.0%
! GACTACTCTTTTCCCATTCA+GGG - chr4_3:27712520-27712539 Msa0636760:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + chr4_3:27712342-27712361 None:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + chr4_3:27712341-27712360 None:intergenic 40.0%
CTTAGAGTGTGTTTGGATTG+GGG - chr4_3:27712720-27712739 Msa0636760:intron 40.0%
! TGTTTGGATTGGGGAATGTT+TGG - chr4_3:27712729-27712748 Msa0636760:intron 40.0%
GAGGGAATGTAATGTTACGA+GGG - chr4_3:27712751-27712770 Msa0636760:intron 40.0%
ACCTCATCCAAACACACTAT+TGG - chr4_3:27712919-27712938 Msa0636760:intron 40.0%
TCCAATAGTGTGTTTGGATG+AGG + chr4_3:27712923-27712942 None:intergenic 40.0%
! TTACCATCTGAAACACCAGA+AGG - chr4_3:27713350-27713369 Msa0636760:intron 40.0%
AATCCTTCTGGTGTTTCAGA+TGG + chr4_3:27713356-27713375 None:intergenic 40.0%
GAGGAACTGAAAACTTTACG+AGG - chr4_3:27713392-27713411 Msa0636760:intron 40.0%
CTGAAAACTTTACGAGGCAA+TGG - chr4_3:27713398-27713417 Msa0636760:intron 40.0%
! AGAACAGGTCGTTTAAGTTC+GGG + chr4_3:27713500-27713519 None:intergenic 40.0%
GAACTTAAACGACCTGTTCT+TGG - chr4_3:27713500-27713519 Msa0636760:intron 40.0%
GCAAAGAACATCCATATCCT+AGG - chr4_3:27713525-27713544 Msa0636760:intron 40.0%
GTAACAATGTCTATGTTCCG+AGG - chr4_3:27713716-27713735 Msa0636760:intron 40.0%
!! ACTACAGCTGTTTTCACAAC+CGG + chr4_3:27713817-27713836 None:intergenic 40.0%
CATCTATGGCTGAGAAAAGA+GGG + chr4_3:27713858-27713877 None:intergenic 40.0%
TCATCTATGGCTGAGAAAAG+AGG + chr4_3:27713859-27713878 None:intergenic 40.0%
TATCTTACTGTCCATTGTGG+CGG + chr4_3:27714004-27714023 None:intergenic 40.0%
TGGTGATTTGAATATGGCAG+AGG - chr4_3:27714228-27714247 Msa0636760:intron 40.0%
TTTGGAAGACAGACTATAGC+AGG - chr4_3:27714280-27714299 Msa0636760:intron 40.0%
TTGTTGCATCCAATTGGTCA+CGG - chr4_3:27714312-27714331 Msa0636760:intron 40.0%
AGTAGTATACCGTGACCAAT+TGG + chr4_3:27714324-27714343 None:intergenic 40.0%
!! GGGTCAAGTTTGCTTTTCAA+TGG + chr4_3:27714469-27714488 None:intergenic 40.0%
!!! CTACGATTTTTTCTTGCCGT+TGG - chr4_3:27714751-27714770 Msa0636760:intron 40.0%
GAGGAAGTCAGAAAACTTGA+AGG - chr4_3:27714776-27714795 Msa0636760:intron 40.0%
!! ACCATCAACTTGTTAGTCAC+TGG - chr4_3:27714996-27715015 Msa0636760:intron 40.0%
! ACCAGTGACTAACAAGTTGA+TGG + chr4_3:27715000-27715019 None:intergenic 40.0%
TATCGAATCGAAAGCCAAGA+CGG + chr4_3:27715036-27715055 None:intergenic 40.0%
TGCTATAATGTAAGGCTCTG+TGG + chr4_3:27715164-27715183 None:intergenic 40.0%
TCCTAAACAACTCTCTCTCT+TGG - chr4_3:27715318-27715337 Msa0636760:intron 40.0%
ACCAAGAGAGAGAGTTGTTT+AGG + chr4_3:27715322-27715341 None:intergenic 40.0%
CCTCTATGAATGAGGTCATT+TGG + chr4_3:27715394-27715413 None:intergenic 40.0%
CCAAATGACCTCATTCATAG+AGG - chr4_3:27715391-27715410 Msa0636760:intron 40.0%
AAAGATCCAAATGCTCCACA+TGG - chr4_3:27715424-27715443 Msa0636760:intron 40.0%
TGAGTCAAGAACTGTTGAGT+CGG - chr4_3:27715552-27715571 Msa0636760:intron 40.0%
AAGCATGGTGGTATGAGATT+AGG - chr4_3:27715587-27715606 Msa0636760:intron 40.0%
GAGATTAGGAATGTTGGTCA+CGG - chr4_3:27715601-27715620 Msa0636760:intron 40.0%
GCGACAAAAAAGATGAACCT+TGG - chr4_3:27715623-27715642 Msa0636760:intron 40.0%
! GTTTTCAAATTAGGCCACCA+AGG + chr4_3:27715643-27715662 None:intergenic 40.0%
CCATTGTTTGGATTACATCG+GGG - chr4_3:27715692-27715711 Msa0636760:intron 40.0%
TTTGGTCAGTATACTTACGC+TGG - chr4_3:27715733-27715752 Msa0636760:intron 40.0%
! CACTTCAACAATGTCACTTC+CGG + chr4_3:27715847-27715866 None:intergenic 40.0%
GTCATAGCTTGAATTTGCGA+AGG + chr4_3:27715874-27715893 None:intergenic 40.0%
TCTCCAAGATATTCCTCATC+CGG + chr4_3:27715934-27715953 None:intergenic 40.0%
AAAGTTCAAAGGGAGGTTGA+TGG - chr4_3:27716005-27716024 Msa0636760:intron 40.0%
GGAATGCCAATATGAAGTTC+AGG - chr4_3:27716052-27716071 Msa0636760:intron 40.0%
TTCAGGAATAGAAATGGTGC+TGG - chr4_3:27716069-27716088 Msa0636760:intron 40.0%
! GTTGGCTTCAAAAGCTCATA+AGG + chr4_3:27716102-27716121 None:intergenic 40.0%
! ATATGTCGACTAAAAAGGCC+CGG - chr4_3:27716412-27716431 Msa0636760:CDS 40.0%
ACTCCCTAGAGATGTAATCA+GGG + chr4_3:27716490-27716509 None:intergenic 40.0%
AGAATATCACTACTGAGGTC+TGG - chr4_3:27716658-27716677 Msa0636760:five_prime_UTR 40.0%
GAATATCACTACTGAGGTCT+GGG - chr4_3:27716659-27716678 Msa0636760:five_prime_UTR 40.0%
AATATCACTACTGAGGTCTG+GGG - chr4_3:27716660-27716679 Msa0636760:five_prime_UTR 40.0%
GAGAAGAGGGAGAGAAGTTA+TGG + chr4_3:27707467-27707486 None:intergenic 45.0%
TTGAACAAGCCATGTCTCCA+TGG - chr4_3:27707589-27707608 Msa0636760:three_prime_UTR 45.0%
AAGCCATGTCTCCATGGTAT+TGG - chr4_3:27707595-27707614 Msa0636760:three_prime_UTR 45.0%
CTTCCAATACCATGGAGACA+TGG + chr4_3:27707601-27707620 None:intergenic 45.0%
ACTGTTCAACCAACAGTTGG+AGG - chr4_3:27707784-27707803 Msa0636760:three_prime_UTR 45.0%
GAGAAAAGTCCTCCAACTGT+TGG + chr4_3:27707796-27707815 None:intergenic 45.0%
GGGTGCAATAAGATAGTCTG+TGG - chr4_3:27707939-27707958 Msa0636760:three_prime_UTR 45.0%
! CGGCATTGCCTTATTGCTTT+AGG + chr4_3:27708052-27708071 None:intergenic 45.0%
AGCTTCGTTTCAACACTCGT+TGG + chr4_3:27708232-27708251 None:intergenic 45.0%
CTCTATACCCACGTTTGTAG+TGG + chr4_3:27708301-27708320 None:intergenic 45.0%
CACTACAAACGTGGGTATAG+AGG - chr4_3:27708299-27708318 Msa0636760:CDS 45.0%
! GGGAAGGAGATAGGGATTTT+AGG + chr4_3:27709801-27709820 None:intergenic 45.0%
! GTTCTTGATGGCTTTCTCAC+TGG - chr4_3:27711023-27711042 Msa0636760:intron 45.0%
ATCATCAGGGTTGTCATGCT+TGG + chr4_3:27711084-27711103 None:intergenic 45.0%
!! TTTGATCCCGAGTTTGTTGG+TGG - chr4_3:27711807-27711826 Msa0636760:intron 45.0%
TGGTTTCCACCAACAAACTC+GGG + chr4_3:27711816-27711835 None:intergenic 45.0%
AGTACAAGTGGTCCTGTCAA+AGG - chr4_3:27712032-27712051 Msa0636760:intron 45.0%
GTACAAGTGGTCCTGTCAAA+GGG - chr4_3:27712033-27712052 Msa0636760:intron 45.0%
ACAGTGTAGTACAAGTGGTC+GGG - chr4_3:27712072-27712091 Msa0636760:intron 45.0%
GACTAACGAAGTCTGCATTC+AGG + chr4_3:27712389-27712408 None:intergenic 45.0%
GACTAACGGAGTCTACATTC+AGG + chr4_3:27712421-27712440 None:intergenic 45.0%
! TTGGATTGGGGAATGTTTGG+AGG - chr4_3:27712732-27712751 Msa0636760:intron 45.0%
! TGGATTGGGGAATGTTTGGA+GGG - chr4_3:27712733-27712752 Msa0636760:intron 45.0%
GGAGGGAATGTAATGTTACG+AGG - chr4_3:27712750-27712769 Msa0636760:intron 45.0%
ATAGGGGGTGAAATCTCACT+TGG + chr4_3:27713151-27713170 None:intergenic 45.0%
ACTTTACGAGGCAATGGACA+AGG - chr4_3:27713404-27713423 Msa0636760:intron 45.0%
CTTAAACGACCTGTTCTTGG+TGG - chr4_3:27713503-27713522 Msa0636760:intron 45.0%
TGTTCTTTGCCACCAAGAAC+AGG + chr4_3:27713515-27713534 None:intergenic 45.0%
GTTCTACAACGCCTAGGATA+TGG + chr4_3:27713539-27713558 None:intergenic 45.0%
! TATCCTAGGCGTTGTAGAAC+TGG - chr4_3:27713539-27713558 Msa0636760:intron 45.0%
GGTTGTGAAAACAGCTGTAG+TGG - chr4_3:27713816-27713835 Msa0636760:intron 45.0%
!! GCTGTAGTGGACAAGAATCT+TGG - chr4_3:27713829-27713848 Msa0636760:intron 45.0%
AGAAACCCTTTCTCAGCTTG+CGG + chr4_3:27713910-27713929 None:intergenic 45.0%
ATCTTACTGTCCATTGTGGC+GGG + chr4_3:27714003-27714022 None:intergenic 45.0%
! TGGCAGAGGACAGATTCTTT+TGG - chr4_3:27714242-27714261 Msa0636760:intron 45.0%
GTGACCAATTGGATGCAACA+AGG + chr4_3:27714313-27714332 None:intergenic 45.0%
!! GTGGTTATTGCTGATTCAGC+AGG + chr4_3:27714505-27714524 None:intergenic 45.0%
AGGACATGCTACAGTTGAAG+AGG - chr4_3:27714549-27714568 Msa0636760:intron 45.0%
TCATGCTAACTAGTGCGTCT+GGG - chr4_3:27714590-27714609 Msa0636760:intron 45.0%
!!! TTTTTTCTTGCCGTTGGTCG+AGG - chr4_3:27714757-27714776 Msa0636760:intron 45.0%
TTTCTGACTTCCTCGACCAA+CGG + chr4_3:27714770-27714789 None:intergenic 45.0%
ACGGTCTCAATGTGCTATCA+TGG + chr4_3:27714841-27714860 None:intergenic 45.0%
TGATAGCACATTGAGACCGT+TGG - chr4_3:27714841-27714860 Msa0636760:intron 45.0%
GTAAAGACTTGCCTCCATTC+TGG + chr4_3:27714902-27714921 None:intergenic 45.0%
GGCAAGTCTTTACACCTACT+TGG - chr4_3:27714909-27714928 Msa0636760:intron 45.0%
! ACTCAACTGGTGTTTGGCTT+TGG - chr4_3:27714933-27714952 Msa0636760:intron 45.0%
ATGAGCAAGGACATGAGCTT+TGG + chr4_3:27714966-27714985 None:intergenic 45.0%
CTGCTAGTCCTCTATGAATG+AGG + chr4_3:27715402-27715421 None:intergenic 45.0%
! TTTAGGCCATGTGGAGCATT+TGG + chr4_3:27715433-27715452 None:intergenic 45.0%
CCCCGATGTAATCCAAACAA+TGG + chr4_3:27715695-27715714 None:intergenic 45.0%
! CATCATGCTGCGGTGAATTT+TGG - chr4_3:27715715-27715734 Msa0636760:intron 45.0%
!! ATGTTGTTTCGTGCAATGGC+CGG + chr4_3:27715775-27715794 None:intergenic 45.0%
!! AGGCATGTTGTTTCGTGCAA+TGG + chr4_3:27715779-27715798 None:intergenic 45.0%
TCTTGGAGAAACGATTGAGC+CGG - chr4_3:27715945-27715964 Msa0636760:intron 45.0%
! ACACCTTTTCCTGTTACACC+AGG + chr4_3:27716132-27716151 None:intergenic 45.0%
GCCCTTGGATGTAATCAAGT+TGG + chr4_3:27716302-27716321 None:intergenic 45.0%
CACTCCCTAGAGATGTAATC+AGG + chr4_3:27716491-27716510 None:intergenic 45.0%
ATATCACTACTGAGGTCTGG+GGG - chr4_3:27716661-27716680 Msa0636760:five_prime_UTR 45.0%
!! GTATAAAATAATTTAAATAA+AGG + chr4_3:27708930-27708949 None:intergenic 5.0%
!! TAAAAAAATAGTTTAAATAA+AGG + chr4_3:27709065-27709084 None:intergenic 5.0%
!! TTGTTTAATATTTAAATAAA+TGG - chr4_3:27709934-27709953 Msa0636760:intron 5.0%
!! TTAATTAATTATTTAATTGT+TGG + chr4_3:27710053-27710072 None:intergenic 5.0%
!! AATTTATAATAGTTAAAAAA+AGG - chr4_3:27711294-27711313 Msa0636760:intron 5.0%
!! AAAATAAAATTTAGTATAAT+TGG - chr4_3:27711986-27712005 Msa0636760:intron 5.0%
!! AATTATTATTGAAATAATTT+AGG - chr4_3:27712190-27712209 Msa0636760:intron 5.0%
!!! ATAATTGTATAATAATTTTA+GGG + chr4_3:27712563-27712582 None:intergenic 5.0%
!!! TTTAAAAAATTTAAAATTCT+AGG + chr4_3:27712888-27712907 None:intergenic 5.0%
!!! AAAAATATTTTTTTTTATTG+GGG + chr4_3:27716364-27716383 None:intergenic 5.0%
!!! GAAAAATATTTTTTTTTATT+GGG + chr4_3:27716365-27716384 None:intergenic 5.0%
!!! TGAAAAATATTTTTTTTTAT+TGG + chr4_3:27716366-27716385 None:intergenic 5.0%
TGACTTACCGGGATCTAGCT+CGG + chr4_3:27707896-27707915 None:intergenic 50.0%
CGGATAAACGAGCACAAGAG+TGG + chr4_3:27708636-27708655 None:intergenic 50.0%
CTTCCACTGATCTATGCGTC+TGG + chr4_3:27710899-27710918 None:intergenic 50.0%
TTAAGTTCGGGATCGCTGTC+TGG + chr4_3:27713488-27713507 None:intergenic 50.0%
CTTCCAGTTCTACAACGCCT+AGG + chr4_3:27713545-27713564 None:intergenic 50.0%
TCTGAGAAGGATTCGTCCCT+CGG + chr4_3:27713736-27713755 None:intergenic 50.0%
TGCGTGGAAAGCCGATTGTA+AGG + chr4_3:27713788-27713807 None:intergenic 50.0%
! GGCTTTCCACGCACTTTTAC+CGG - chr4_3:27713795-27713814 Msa0636760:intron 50.0%
! TCACAACCGGTAAAAGTGCG+TGG + chr4_3:27713804-27713823 None:intergenic 50.0%
TTCTTGCGTCTGTGTTGCCA+AGG - chr4_3:27713926-27713945 Msa0636760:intron 50.0%
TTGACAAGCCTGACCAACCT+TGG + chr4_3:27713946-27713965 None:intergenic 50.0%
GTTGGTCAGGCTTGTCAATG+AGG - chr4_3:27713948-27713967 Msa0636760:intron 50.0%
TCAGGCTTGTCAATGAGGCT+AGG - chr4_3:27713953-27713972 Msa0636760:intron 50.0%
GTCATGCTAACTAGTGCGTC+TGG - chr4_3:27714589-27714608 Msa0636760:intron 50.0%
!! CATTCTGGCTTTCCGCCAAT+TGG + chr4_3:27714887-27714906 None:intergenic 50.0%
CAATTGGCGGAAAGCCAGAA+TGG - chr4_3:27714885-27714904 Msa0636760:intron 50.0%
ACACCTACTTGGCACTCAAC+TGG - chr4_3:27714920-27714939 Msa0636760:intron 50.0%
ACACCAGTTGAGTGCCAAGT+AGG + chr4_3:27714926-27714945 None:intergenic 50.0%
CTTGGCACTCAACTGGTGTT+TGG - chr4_3:27714927-27714946 Msa0636760:intron 50.0%
!! CAACTGGTGTTTGGCTTTGG+AGG - chr4_3:27714936-27714955 Msa0636760:intron 50.0%
CATGTCCTTGCTCATGACTC+TGG - chr4_3:27714971-27714990 Msa0636760:intron 50.0%
CATGCCTACAGAAGACCCTT+CGG - chr4_3:27715792-27715811 Msa0636760:intron 50.0%
TATGACGGTGATGACCGTGT+TGG - chr4_3:27715888-27715907 Msa0636760:intron 50.0%
TCGCCGGATGAGGAATATCT+TGG - chr4_3:27715928-27715947 Msa0636760:intron 50.0%
TTGAAGCCAACATCAGAGCC+TGG - chr4_3:27716111-27716130 Msa0636760:intron 50.0%
! GTTACACCAGGCTCTGATGT+TGG + chr4_3:27716120-27716139 None:intergenic 50.0%
ACATCAGAGCCTGGTGTAAC+AGG - chr4_3:27716120-27716139 Msa0636760:intron 50.0%
GAGCCTGGTGTAACAGGAAA+AGG - chr4_3:27716126-27716145 Msa0636760:intron 50.0%
CCTAGAGATGTAATCAGGGC+CGG + chr4_3:27716486-27716505 None:intergenic 50.0%
CGGCCCTGATTACATCTCTA+GGG - chr4_3:27716484-27716503 Msa0636760:CDS 50.0%
GTTAGCTCCGAGCTAGATCC+CGG - chr4_3:27707886-27707905 Msa0636760:three_prime_UTR 55.0%
CCACTGATCTATGCGTCTGG+TGG + chr4_3:27710896-27710915 None:intergenic 55.0%
CCACCAGACGCATAGATCAG+TGG - chr4_3:27710893-27710912 Msa0636760:intron 55.0%
GGAAGACCTCGTTGCGATAC+AGG - chr4_3:27713560-27713579 Msa0636760:intron 55.0%
GACCTCGTTGCGATACAGGT+AGG - chr4_3:27713564-27713583 Msa0636760:intron 55.0%
TTGCCTCCGCAAGCTGAGAA+AGG - chr4_3:27713901-27713920 Msa0636760:intron 55.0%
TGCCTCCGCAAGCTGAGAAA+GGG - chr4_3:27713902-27713921 Msa0636760:intron 55.0%
AACCCTTTCTCAGCTTGCGG+AGG + chr4_3:27713907-27713926 None:intergenic 55.0%
TGCGTCTGTGTTGCCAAGGT+TGG - chr4_3:27713930-27713949 Msa0636760:intron 55.0%
! CTGTGTTGCCAAGGTTGGTC+AGG - chr4_3:27713935-27713954 Msa0636760:intron 55.0%
! TTGTGGCGGGAGTCTCGAAA+CGG + chr4_3:27713990-27714009 None:intergenic 55.0%
TTTCGAGACTCCCGCCACAA+TGG - chr4_3:27713990-27714009 Msa0636760:intron 55.0%
! AACTAGTGCGTCTGGGACAC+TGG - chr4_3:27714597-27714616 Msa0636760:intron 55.0%
CGAGCTAACTCGATCGCCAA+CGG + chr4_3:27714860-27714879 None:intergenic 55.0%
CGTTGGCGATCGAGTTAGCT+CGG - chr4_3:27714858-27714877 Msa0636760:intron 55.0%
!! TCTGGCTTTCCGCCAATTGG+CGG + chr4_3:27714884-27714903 None:intergenic 55.0%
TTGGCGGAAAGCCAGAATGG+AGG - chr4_3:27714888-27714907 Msa0636760:intron 55.0%
GGTAGCCAGAGTCATGAGCA+AGG + chr4_3:27714979-27714998 None:intergenic 55.0%
! TACATCGGGGCATCATGCTG+CGG - chr4_3:27715705-27715724 Msa0636760:intron 55.0%
CGTGCAATGGCCGGTCTATT+AGG + chr4_3:27715766-27715785 None:intergenic 55.0%
CTGTCCGAAGGGTCTTCTGT+AGG + chr4_3:27715799-27715818 None:intergenic 55.0%
AAGACCCTTCGGACAGCGAA+TGG - chr4_3:27715803-27715822 Msa0636760:intron 55.0%
AGACCCTTCGGACAGCGAAT+GGG - chr4_3:27715804-27715823 Msa0636760:intron 55.0%
GTTCCCATTCGCTGTCCGAA+GGG + chr4_3:27715810-27715829 None:intergenic 55.0%
AGTTCCCATTCGCTGTCCGA+AGG + chr4_3:27715811-27715830 None:intergenic 55.0%
GTCAAGTCATTCGCCGGATG+AGG - chr4_3:27715918-27715937 Msa0636760:intron 55.0%
GAGAAACGATTGAGCCGGCT+TGG - chr4_3:27715950-27715969 Msa0636760:intron 55.0%
! ATCGGTTCCTCTTGCCAAGC+CGG + chr4_3:27715967-27715986 None:intergenic 55.0%
!! GGGAGGTTGATGGAGCTTGA+AGG - chr4_3:27716015-27716034 Msa0636760:intron 55.0%
CCTTACTCTTGAGTCGCCCT+TGG + chr4_3:27716317-27716336 None:intergenic 55.0%
CCAAGGGCGACTCAAGAGTA+AGG - chr4_3:27716314-27716333 Msa0636760:CDS 55.0%
CCGGCCCTGATTACATCTCT+AGG - chr4_3:27716483-27716502 Msa0636760:CDS 55.0%
GATCGCTGTCTGGATCACCG+AGG + chr4_3:27713478-27713497 None:intergenic 60.0%
GGCCTACCTGTATCGCAACG+AGG + chr4_3:27713569-27713588 None:intergenic 60.0%
GAGTTAGCTCGGCCGCCAAT+TGG - chr4_3:27714869-27714888 Msa0636760:intron 60.0%
TTAGCTCGGCCGCCAATTGG+CGG - chr4_3:27714872-27714891 Msa0636760:intron 60.0%
!! GATTGAGCCGGCTTGGCAAG+AGG - chr4_3:27715957-27715976 Msa0636760:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 27707429 27716704 27707429 ID=Msa0636760;Name=Msa0636760
chr4_3 mRNA 27707429 27716704 27707429 ID=Msa0636760-mRNA-1;Parent=Msa0636760;Name=Msa0636760-mRNA-1;_AED=0.09;_eAED=0.09;_QI=118|1|1|1|1|1|8|531|906
chr4_3 exon 27707429 27708989 27707429 ID=Msa0636760-mRNA-1:exon:6864;Parent=Msa0636760-mRNA-1
chr4_3 exon 27709116 27709417 27709116 ID=Msa0636760-mRNA-1:exon:6863;Parent=Msa0636760-mRNA-1
chr4_3 exon 27709563 27709673 27709563 ID=Msa0636760-mRNA-1:exon:6862;Parent=Msa0636760-mRNA-1
chr4_3 exon 27709800 27709885 27709800 ID=Msa0636760-mRNA-1:exon:6861;Parent=Msa0636760-mRNA-1
chr4_3 exon 27710118 27710438 27710118 ID=Msa0636760-mRNA-1:exon:6860;Parent=Msa0636760-mRNA-1
chr4_3 exon 27710552 27710789 27710552 ID=Msa0636760-mRNA-1:exon:6859;Parent=Msa0636760-mRNA-1
chr4_3 exon 27713006 27713277 27713006 ID=Msa0636760-mRNA-1:exon:6858;Parent=Msa0636760-mRNA-1
chr4_3 exon 27716226 27716704 27716226 ID=Msa0636760-mRNA-1:exon:6857;Parent=Msa0636760-mRNA-1
chr4_3 five_prime_UTR 27716587 27716704 27716587 ID=Msa0636760-mRNA-1:five_prime_utr;Parent=Msa0636760-mRNA-1
chr4_3 CDS 27716226 27716586 27716226 ID=Msa0636760-mRNA-1:cds;Parent=Msa0636760-mRNA-1
chr4_3 CDS 27713006 27713277 27713006 ID=Msa0636760-mRNA-1:cds;Parent=Msa0636760-mRNA-1
chr4_3 CDS 27710552 27710789 27710552 ID=Msa0636760-mRNA-1:cds;Parent=Msa0636760-mRNA-1
chr4_3 CDS 27710118 27710438 27710118 ID=Msa0636760-mRNA-1:cds;Parent=Msa0636760-mRNA-1
chr4_3 CDS 27709800 27709885 27709800 ID=Msa0636760-mRNA-1:cds;Parent=Msa0636760-mRNA-1
chr4_3 CDS 27709563 27709673 27709563 ID=Msa0636760-mRNA-1:cds;Parent=Msa0636760-mRNA-1
chr4_3 CDS 27709116 27709417 27709116 ID=Msa0636760-mRNA-1:cds;Parent=Msa0636760-mRNA-1
chr4_3 CDS 27707960 27708989 27707960 ID=Msa0636760-mRNA-1:cds;Parent=Msa0636760-mRNA-1
chr4_3 three_prime_UTR 27707429 27707959 27707429 ID=Msa0636760-mRNA-1:three_prime_utr;Parent=Msa0636760-mRNA-1
Gene Sequence

>Msa0636760

ATGCTTATGCAACAAATAAGTTTAAAGCCAAATTGTCTCATCTTGAACAAGCCATGTCTCCATGGTATTGGAAGTAACCAAACATGTTTTCATGTTGGATCGTCAAGGCCTTTGTTCATAAACCAAAAGAAACAAAGGAGGTTGTTTAGGAGGAATGAGTGCAGCAAAATCAAAGCTGTAGCTGTGAGTGATGAAGAACTTATAGAACAGCAATCAGTAAAAGTAACAGCCACAGTTACTGTTCAACCAACAGTTGGAGGACTTTTCTCAGAAATGGCTATAGAAAGAGGGCTTGATGACATAACCGATTTGTTGGGTAAATCAATTCTCTTGGAGTTTGTTAGCTCCGAGCTAGATCCCGAGACAAAATTGGAGAAGGAAGGAATCAAAGGTTACGTCCACCAGACGCATAGATCAGTGGAAGAGATTAAATATGAAGCTGAATTTGAAGTACCAGGAAGTTTTGGAGATATTGGTGCAGTTCTTGTGGAAAATGAGCATAGAAGGGAAATGTTTATAAAGCAAATTGTTCTTGATGGCTTTCTCACTGGTCCTGTCAATTTTTCTTGTGAATCATGGGTTCATTCCAAGCATGACAACCCTGATGATAAGAGGGTCATTTTTTCCAATAAGTCATATTTACCATCTGAAACACCAGAAGGATTGATAAGGTTAAGAGAAGAGGAACTGAAAACTTTACGAGGCAATGGACAAGGCGAACGCAAGAAATTTGATAGAATATACGATTACGATGTGTATAATGACCTCGGTGATCCAGACAGCGATCCCGAACTTAAACGACCTGTTCTTGGTGGCAAAGAACATCCATATCCTAGGCGTTGTAGAACTGGAAGACCTCGTTGCGATACAGATCCGTTGTCTGAGAAAAGAAGTAACAATGTCTATGTTCCGAGGGACGAATCCTTCTCAGAATTAAAGCAACTCTCGTTTTCAGCAAATACCTTACAATCGGCTTTCCACGCACTTTTACCGGTTGTGAAAACAGCTGTAGTGGACAAGAATCTTGGATTCCCTCTTTTCTCAGCCATAGATGACCTTTTCAATGAAGGATTTAACTTGCCTCCGCAAGCTGAGAAAGGGTTTCTTGCGTCTGTGTTGCCAAGGTTGGTCAGGCTTGTCAATGAGGCTAGGAATGACATTCTCCGTTTCGAGACTCCCGCCACAATGGACAAGGACAGATTCTTTTGGTTTAGGGATGAAGAATTTGGAAGACAGACTATAGCAGGTCTTAATCCTTGTTGCATCCAATTGGTCACGGAATGGCCATTGAAAAGCAAACTTGACCCTAAAATTTATGGTCCTGCTGAATCAGCAATAACCACTGAAATGATTGAGCAACAAATCAGAGGACATGCTACAGTTGAAGAGGCCATAAAACAGAAGAAGTTGTACATCCTAGACTACTACGATTTTTTCTTGCCGTTGGTCGAGGAAGTCAGAAAACTTGAAGGCACAACATTATATGGATCAAGGACATTGTTCTTTCTGAACCATGATAGCACATTGAGACCGTTGGCGATCGAGTTAGCTCGGCCGCCAATTGGCGGAAAGCCAGAATGGAGGCAAGTCTTTACACCTACTTGGCACTCAACTGGTGTTTGGCTTTGGAGGCTTGCCAAAGCTCATGTCCTTGCTCATGACTCTGGCTACCATCAACTTGTTAGTCACTGGTTGAGAACTCATTGTGCCACAGAGCCTTACATTATAGCAACAAACAGACAACTGAGTGCAATGCATCCAATCTACAAACTATTACTTCCACATTTTAGGTACACAATGGAAATCAATGCACTTGCACGTGAAGCACTTATAAATGCAGATGGAATAATTGAGAGTAGTTTCACTCCTAAACAACTCTCTCTCTTGGTAAGTTCAATAGCCTATGATAAGCATTGGCAATTTGACTTGCAAGCCCTACCAAATGACCTCATTCATAGAGGACTAGCAGAAAAAGATCCAAATGCTCCACATGGCCTAAAACTAACAATAGAAGATTACCCTTATGCAAATGATGGTCTTATTCTTTGGGATACTATCAAATCTTGGGTCACTGATTATGTTAACCACTACTATAACAATGAGTCAAGAACTGTTGAGTCGGATAAAGAATTACAAGCATGGTGGTATGAGATTAGGAATGTTGGTCACGGCGACAAAAAAGATGAACCTTGGTGGCCTAATTTGAAAACAAATGATGATCTTGTTGAAATAGTGACGACCATTGTTTGGATTACATCGGGGCATCATGCTGCGGTGAATTTTGGTCAGTATACTTACGCTGGATATTTTCCTAATAGACCGGCCATTGCACGAAACAACATGCCTACAGAAGACCCTTCGGACAGCGAATGGGAACTTTTCTTTGAGAAACCGGAAGTGACATTGTTGAAGTGTTTCCCTTCGCAAATTCAAGCTATGACGGTGATGACCGTGTTGGATATTTTGTCAAGTCATTCGCCGGATGAGGAATATCTTGGAGAAACGATTGAGCCGGCTTGGCAAGAGGAACCGATGATTAAAGCTGCTTTTGAAAAGTTCAAAGGGAGGTTGATGGAGCTTGAAGGTATAATAGATGAGAGGAATGCCAATATGAAGTTCAGGAATAGAAATGGTGCTGGAATTTTGCCTTATGAGCTTTTGAAGCCAACATCAGAGCCTGGTGTAACAGGAAAAGGTGTTCCATATAGTGTCTCTATTTGA
Protein sequence

>Msa0636760

MLMQQISLKPNCLILNKPCLHGIGSNQTCFHVGSSRPLFINQKKQRRLFRRNECSKIKAVAVSDEELIEQQSVKVTATVTVQPTVGGLFSEMAIERGLDDITDLLGKSILLEFVSSELDPETKLEKEGIKGYVHQTHRSVEEIKYEAEFEVPGSFGDIGAVLVENEHRREMFIKQIVLDGFLTGPVNFSCESWVHSKHDNPDDKRVIFSNKSYLPSETPEGLIRLREEELKTLRGNGQGERKKFDRIYDYDVYNDLGDPDSDPELKRPVLGGKEHPYPRRCRTGRPRCDTDPLSEKRSNNVYVPRDESFSELKQLSFSANTLQSAFHALLPVVKTAVVDKNLGFPLFSAIDDLFNEGFNLPPQAEKGFLASVLPRLVRLVNEARNDILRFETPATMDKDRFFWFRDEEFGRQTIAGLNPCCIQLVTEWPLKSKLDPKIYGPAESAITTEMIEQQIRGHATVEEAIKQKKLYILDYYDFFLPLVEEVRKLEGTTLYGSRTLFFLNHDSTLRPLAIELARPPIGGKPEWRQVFTPTWHSTGVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPIYKLLLPHFRYTMEINALAREALINADGIIESSFTPKQLSLLVSSIAYDKHWQFDLQALPNDLIHRGLAEKDPNAPHGLKLTIEDYPYANDGLILWDTIKSWVTDYVNHYYNNESRTVESDKELQAWWYEIRNVGHGDKKDEPWWPNLKTNDDLVEIVTTIVWITSGHHAAVNFGQYTYAGYFPNRPAIARNNMPTEDPSDSEWELFFEKPEVTLLKCFPSQIQAMTVMTVLDILSSHSPDEEYLGETIEPAWQEEPMIKAAFEKFKGRLMELEGIIDERNANMKFRNRNGAGILPYELLKPTSEPGVTGKGVPYSVSI*