AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0604130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0604130 MtrunA17_Chr4g0033171 97.701 696 16 0 211 906 30 725 0.0 1421
Msa0604130 MtrunA17_Chr3g0118651 60.844 853 318 7 59 906 62 903 0.0 1115
Msa0604130 MtrunA17_Chr3g0118641 59.096 885 346 8 27 906 29 902 0.0 1092
Msa0604130 MtrunA17_Chr3g0118621 62.352 842 308 8 70 906 28 865 0.0 1063
Msa0604130 MtrunA17_Chr8g0344201 48.636 843 416 11 74 905 90 926 0.0 824
Msa0604130 MtrunA17_Chr8g0377101 47.580 847 425 11 72 906 77 916 0.0 820
Msa0604130 MtrunA17_Chr1g0205611 44.245 834 432 17 98 906 31 856 0.0 691
Msa0604130 MtrunA17_Chr8g0342881 44.282 822 435 15 98 906 45 856 0.0 677
Msa0604130 MtrunA17_Chr8g0343011 44.135 827 424 15 98 906 59 865 0.0 674
Msa0604130 MtrunA17_Chr8g0344211 44.214 821 437 13 98 906 57 868 0.0 673
Msa0604130 MtrunA17_Chr2g0329901 42.580 876 460 18 52 906 10 863 0.0 667
Msa0604130 MtrunA17_Chr8g0342921 43.349 842 437 16 84 906 49 869 0.0 666
Msa0604130 MtrunA17_Chr2g0329911 41.705 868 477 15 52 906 10 861 0.0 665
Msa0604130 MtrunA17_Chr8g0343021 43.489 837 442 15 85 906 44 864 0.0 664
Msa0604130 MtrunA17_Chr5g0406871 42.063 882 470 19 48 906 4 867 0.0 661
Msa0604130 MtrunA17_Chr8g0342971 42.630 882 468 19 46 906 6 870 0.0 660
Msa0604130 MtrunA17_Chr1g0191921 44.178 833 426 15 98 906 41 858 0.0 659
Msa0604130 MtrunA17_Chr8g0343031 43.256 823 438 14 99 906 57 865 0.0 655
Msa0604130 MtrunA17_Chr8g0342891 42.271 828 443 15 98 906 50 861 0.0 648
Msa0604130 MtrunA17_Chr4g0047281 43.086 810 418 14 109 905 115 894 0.0 648
Msa0604130 MtrunA17_Chr8g0342951 42.694 876 470 18 48 906 8 868 0.0 646
Msa0604130 MtrunA17_Chr8g0342931 45.241 767 388 15 155 906 1 750 0.0 645
Msa0604130 MtrunA17_Chr7g0272791 42.099 829 453 16 98 906 46 867 0.0 637
Msa0604130 MtrunA17_Chr8g0342901 42.663 811 421 15 102 906 56 828 0.0 632
Msa0604130 MtrunA17_Chr3g0120071 39.796 882 481 23 48 906 4 858 0.0 605
Msa0604130 MtrunA17_Chr8g0342981 41.585 820 429 16 106 906 35 823 0.0 592
Msa0604130 MtrunA17_Chr8g0343001 43.158 760 377 13 152 906 98 807 0.0 581
Msa0604130 MtrunA17_Chr8g0342991 42.500 760 382 13 152 906 98 807 0.0 576
Msa0604130 MtrunA17_Chr8g0338451 37.272 821 469 18 98 889 47 850 5.92e-175 529
Msa0604130 MtrunA17_Chr4g0033181 94.787 211 11 0 1 211 1 211 2.07e-140 417
Msa0604130 MtrunA17_Chr8g0344241 47.118 399 204 5 511 906 67 461 6.65e-117 364
Msa0604130 MtrunA17_Chr6g0471951 36.275 510 271 10 363 861 8 474 4.78e-103 329
Msa0604130 MtrunA17_Chr7g0218231 68.908 119 37 0 555 673 14 132 2.00e-54 185
Msa0604130 MtrunA17_Chr6g0468081 67.416 89 29 0 585 673 1 89 1.14e-35 130
Msa0604130 MtrunA17_Chr4g0047271 47.253 91 47 1 816 905 1 91 3.72e-18 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0604130 AT3G45140.1 56.905 840 344 8 71 906 71 896 0.0 1003
Msa0604130 AT3G45140.2 59.605 760 297 6 151 906 1 754 0.0 961
Msa0604130 AT1G72520.1 48.815 844 413 12 74 906 91 926 0.0 833
Msa0604130 AT1G17420.1 48.951 858 412 12 63 906 74 919 0.0 826
Msa0604130 AT1G67560.1 46.416 851 428 14 72 906 79 917 0.0 784
Msa0604130 AT1G55020.1 45.301 830 420 16 98 906 43 859 0.0 679
Msa0604130 AT3G22400.1 43.578 872 448 18 70 906 24 886 0.0 677

Find 240 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTTGACCCTAAAATTTA+TGG 0.171306 4_2:-49287962 Msa0604130:CDS
CACACCATCTCTAATATATT+TGG 0.188352 4_2:+49286181 None:intergenic
CTCTTTCTGCAAGAGTTAAA+AGG 0.191733 4_2:-49294886 Msa0604130:five_prime_UTR
CAAATGATGGTCTTATTCTT+TGG 0.204203 4_2:-49286961 Msa0604130:CDS
GACTTTAGTGACCTTACTTT+TGG 0.210756 4_2:+49286115 None:intergenic
ACAACCTCCTTTGTTTCTTT+TGG 0.222665 4_2:+49294711 None:intergenic
CATCATGCTGCGGTGAATTT+TGG 0.226534 4_2:-49286725 Msa0604130:CDS
GGATAATGATGAAACCTTAT+TGG 0.262122 4_2:+49291346 None:intergenic
ATAAAGCAAATTGTTCTTGA+TGG 0.271031 4_2:-49291455 Msa0604130:CDS
CATTTCATTCCACTATTTCA+TGG 0.276534 4_2:+49285875 None:intergenic
CTTGAAGGCACAACATTATA+TGG 0.278755 4_2:-49287649 Msa0604130:CDS
CGTGCAATGGCCGGTCTATT+AGG 0.281859 4_2:+49286677 None:intergenic
TTTGAAGTACCAGGAAGTTT+TGG 0.287906 4_2:-49291527 Msa0604130:CDS
TTTAGGCCATGTGGGGCATT+TGG 0.297732 4_2:+49287010 None:intergenic
TGGTTTAGGGATGAAGAATT+TGG 0.299482 4_2:-49288178 Msa0604130:CDS
AAGTTGGATTGGATATAATT+TGG 0.300003 4_2:+49286157 None:intergenic
GTAAAGACTTGCCTCCATTC+TGG 0.301347 4_2:+49287541 None:intergenic
AGAAACAAAGGAGGTTGTTT+AGG 0.305076 4_2:-49294706 Msa0604130:CDS
AGGGAGAGAAGTTATGGTTA+TGG 0.307083 4_2:+49294922 None:intergenic
CATTCTGGCTTTCCGCCAAT+TGG 0.310117 4_2:+49287556 None:intergenic
CTTGGCACTCAACTGGTGTT+TGG 0.311025 4_2:-49287513 Msa0604130:CDS
CTTAACCTTATCAATCCTTC+TGG 0.318156 4_2:+49289079 None:intergenic
GTTCTACAACGCCTAGGATA+TGG 0.322916 4_2:+49288908 None:intergenic
AAATGATGGTCTTATTCTTT+GGG 0.323159 4_2:-49286960 Msa0604130:CDS
ACTCAACTGGTGTTTGGCTT+TGG 0.325509 4_2:-49287507 Msa0604130:CDS
TATAATGTTAAATAAAGTTT+TGG 0.327389 4_2:-49286211 Msa0604130:three_prime_UTR
CACTTCAACAATGTCACTTC+CGG 0.328499 4_2:+49286596 None:intergenic
GAACTCAAGCGACCGGTTCT+TGG 0.334627 4_2:-49288944 Msa0604130:CDS
TACCAAGAGGGAGAGTTGTT+TGG 0.336952 4_2:+49287120 None:intergenic
ATAGTTTATTGAAGGCTAAA+TGG 0.339960 4_2:+49285928 None:intergenic
GGGAGAGAAGTTATGGTTAT+GGG 0.342656 4_2:+49294923 None:intergenic
ACATCAGAGCCTGGTGTAAC+AGG 0.346010 4_2:-49286320 Msa0604130:CDS
CAACTGGTGTTTGGCTTTGG+AGG 0.346039 4_2:-49287504 Msa0604130:CDS
TTTGGGATACTATCAAATCT+TGG 0.346372 4_2:-49286943 Msa0604130:CDS
TTCATTGAAAAGGTCATCTA+TGG 0.347003 4_2:+49288575 None:intergenic
TTGTTCAAGATGAGACAATT+TGG 0.358818 4_2:+49294806 None:intergenic
GAGAAGAGGGAGAGAAGTTA+TGG 0.360913 4_2:+49294916 None:intergenic
ACCAAGAGGGAGAGTTGTTT+GGG 0.361033 4_2:+49287121 None:intergenic
AAATAGTGACGACCATTGTT+TGG 0.375344 4_2:-49286760 Msa0604130:CDS
CTGTTTGTTGCTATAATGTA+AGG 0.375603 4_2:+49287271 None:intergenic
CCTCTATGAATGAGGTCATT+TGG 0.378176 4_2:+49287049 None:intergenic
ATCCAACATGAAAACATGTT+TGG 0.381038 4_2:+49294756 None:intergenic
TTGTGGAAAATGAGCATAGA+AGG 0.384517 4_2:-49291487 Msa0604130:CDS
ACCATTGTTTGGATTACATC+GGG 0.389981 4_2:-49286749 Msa0604130:CDS
TGGCAGAGGACAGATTCTTT+TGG 0.392055 4_2:-49288198 Msa0604130:intron
TGATGACATAACAGATTTGT+TGG 0.393027 4_2:-49294540 Msa0604130:CDS
TATCCTAGGCGTTGTAGAAC+TGG 0.394768 4_2:-49288905 Msa0604130:CDS
GGAATGCTAATATGAAGTTC+AGG 0.395431 4_2:-49286388 Msa0604130:CDS
GTCACTAAAGTCCTCACTTT+AGG 0.399398 4_2:-49286104 Msa0604130:three_prime_UTR
TTCCTAGCATAGTTTATTGA+AGG 0.400801 4_2:+49285920 None:intergenic
TCTCAAATAGAGACACTATA+TGG 0.403294 4_2:+49286287 None:intergenic
CCAATATCTCCAAAACTTCC+TGG 0.404847 4_2:+49291518 None:intergenic
TTGGGATACTATCAAATCTT+GGG 0.406679 4_2:-49286942 Msa0604130:CDS
ACACCTACTTGGCACTCAAC+TGG 0.407754 4_2:-49287520 Msa0604130:CDS
GTTCTTGATGGCTTTCTCAC+TGG 0.412239 4_2:-49291443 Msa0604130:CDS
ATCATCAGGGTTGTCATGCT+TGG 0.413714 4_2:+49291385 None:intergenic
AGAACCGGTCGCTTGAGTTC+AGG 0.416704 4_2:+49288947 None:intergenic
CTGTGTTGCCAAGGTTGGTC+AGG 0.418531 4_2:-49288509 Msa0604130:CDS
GTTGGGTAAATCAATTCTCT+TGG 0.421329 4_2:-49294522 Msa0604130:CDS
GGAAGACCTCGTTGCGATAC+AGG 0.429976 4_2:-49288884 Msa0604130:intron
ATAAGACCATCATTTGCATA+AGG 0.432398 4_2:+49286968 None:intergenic
AAAATGACCCTCTTATCATC+AGG 0.437774 4_2:+49291371 None:intergenic
CTACATATGCCATGAAATAG+TGG 0.438189 4_2:-49285884 Msa0604130:three_prime_UTR
TAATCCTTGTTGCATCCAAT+TGG 0.438384 4_2:-49288134 Msa0604130:CDS
GATGACATAACAGATTTGTT+GGG 0.448090 4_2:-49294539 Msa0604130:CDS
AGAAGTATACCGTGACCAAT+TGG 0.449084 4_2:+49288119 None:intergenic
AAGCCATGTCTCCATGGTAT+TGG 0.449477 4_2:-49294785 Msa0604130:CDS
GAGTTAGCTCGGCCGCCAAT+TGG 0.451009 4_2:-49287571 Msa0604130:CDS
GGCAAGTCTTTACACCTACT+TGG 0.451346 4_2:-49287531 Msa0604130:CDS
AAAGAGAAGTTATGAGAAGA+GGG 0.451983 4_2:+49294903 None:intergenic
GCTGTAGTGGACAAGAATCT+TGG 0.452160 4_2:-49288615 Msa0604130:CDS
AAAGTTCAAAGGGAGGTTGA+TGG 0.452373 4_2:-49286435 Msa0604130:CDS
TCTTTCTGCAAGAGTTAAAA+GGG 0.455179 4_2:-49294885 Msa0604130:five_prime_UTR
ACCAGTGACTAACAAGTTGA+TGG 0.456313 4_2:+49287443 None:intergenic
CATGTCCTTGCTCATGACTC+TGG 0.457266 4_2:-49287469 Msa0604130:CDS
GTTGGCTTCAAAAGCTCATA+AGG 0.458492 4_2:+49286341 None:intergenic
AGTTAAATCCTTCATTGAAA+AGG 0.459003 4_2:+49288565 None:intergenic
TTCAGCAAATACCTTACAAT+CGG 0.459678 4_2:-49288670 Msa0604130:CDS
AAGCATGGTGGTATGAGATT+AGG 0.463349 4_2:-49286853 Msa0604130:CDS
TGTTCTTTGCCACCAAGAAC+CGG 0.463888 4_2:+49288932 None:intergenic
GTGGTTATTGCTGATTCAGC+AGG 0.464570 4_2:+49287938 None:intergenic
GTCAAGTCATTCGCCGGATG+AGG 0.467476 4_2:-49286522 Msa0604130:CDS
TCTGGCTTTCCGCCAATTGG+CGG 0.468670 4_2:+49287559 None:intergenic
TCGCCGGATGAGGAATATCT+TGG 0.470343 4_2:-49286512 Msa0604130:CDS
GAAAGAGAAGTTATGAGAAG+AGG 0.473228 4_2:+49294902 None:intergenic
ATGAAGTTCAGGAATAGAAA+TGG 0.474519 4_2:-49286377 Msa0604130:CDS
ATGAGCAAGGACATGAGCTT+TGG 0.474874 4_2:+49287477 None:intergenic
AACAAAGGAGGTTGTTTAGG+AGG 0.475654 4_2:-49294703 Msa0604130:CDS
GGAAGTAATAGTTTGTAGAT+TGG 0.475694 4_2:+49287229 None:intergenic
TTGAGTTCAGGATCGCTGTC+TGG 0.477723 4_2:+49288959 None:intergenic
AAATTGCCAATGCTTATCAT+AGG 0.480247 4_2:+49287087 None:intergenic
TCTCCAAGATATTCCTCATC+CGG 0.481001 4_2:+49286509 None:intergenic
TGCGTCTGTGTTGCCAAGGT+TGG 0.481745 4_2:-49288514 Msa0604130:CDS
GTTACACCAGGCTCTGATGT+TGG 0.481878 4_2:+49286323 None:intergenic
GAGCCTGGTGTAACAGGAAA+AGG 0.483878 4_2:-49286314 Msa0604130:CDS
TGCCTCCTCAAGCTGAGAAA+GGG 0.484854 4_2:-49288542 Msa0604130:CDS
CACTATTTCATGGCATATGT+AGG 0.484908 4_2:+49285885 None:intergenic
GAGAAACGATTGAGCCGGCT+TGG 0.485512 4_2:-49286490 Msa0604130:CDS
TTGCCTCCTCAAGCTGAGAA+AGG 0.485874 4_2:-49288543 Msa0604130:CDS
CTTCCACTGATCTATGCGTC+TGG 0.491600 4_2:+49291570 None:intergenic
GTTAGCTCCGAGCTAGATCC+CGG 0.491907 4_2:-49294494 Msa0604130:intron
TGCGTGGAAAGCCGATTGTA+AGG 0.492059 4_2:+49288659 None:intergenic
TAAGACCATCATTTGCATAA+GGG 0.494543 4_2:+49286969 None:intergenic
ATGACAACCCTGATGATAAG+AGG 0.495085 4_2:-49291379 Msa0604130:CDS
CCAAGCGCAGCCCAAAAGTA+AGG 0.497010 4_2:-49286126 Msa0604130:three_prime_UTR
GAGACAAAATTGGAGAAGGA+AGG 0.497417 4_2:-49291611 Msa0604130:CDS
ATTGATAAGGTTAAGAGAAG+AGG 0.497584 4_2:-49289071 Msa0604130:CDS
TGGATGTAATCAAGTTGGAT+TGG 0.498292 4_2:+49286146 None:intergenic
TCAAAAGCAGCTTTAATCAT+CGG 0.502785 4_2:+49286458 None:intergenic
TCTGAGAAGGATTCGTCCCT+CGG 0.504722 4_2:+49288711 None:intergenic
ACGGTCTCAATGTGCTATCA+TGG 0.506109 4_2:+49287602 None:intergenic
CTGCTAGTCCTCTATGAATG+AGG 0.508752 4_2:+49287041 None:intergenic
TTCAGGAATAGAAATGGTGC+TGG 0.509228 4_2:-49286371 Msa0604130:CDS
AAGACCCTTCGGACAGCGAA+TGG 0.509994 4_2:-49286637 Msa0604130:CDS
ATCGGTTCCTCTTGCCAAGC+CGG 0.510599 4_2:+49286476 None:intergenic
TTGACTCATTGTTATAGTAG+TGG 0.511572 4_2:+49286903 None:intergenic
ATGTTGTTTCGTGCAATGGC+CGG 0.516262 4_2:+49286668 None:intergenic
TTCTTGCGTCTGTGTTGCCA+AGG 0.521427 4_2:-49288518 Msa0604130:CDS
ACTGTTCAACCAACAGTTGG+AGG 0.522239 4_2:-49294596 Msa0604130:CDS
TTGAAGCCAACATCAGAGCC+TGG 0.522494 4_2:-49286329 Msa0604130:CDS
TTTGGAAGACAGACTATAGC+AGG 0.522688 4_2:-49288160 Msa0604130:CDS
ATCTTACTGTCCATTGTGGC+GGG 0.524956 4_2:+49288444 None:intergenic
AGGCATGTTGTTTCGTGCAA+TGG 0.525554 4_2:+49286664 None:intergenic
GCAAAGAACATCCATATCCT+AGG 0.527336 4_2:-49288919 Msa0604130:CDS
AGACCCTTCGGACAGCGAAT+GGG 0.527739 4_2:-49286636 Msa0604130:CDS
GCGCTTGGATGTAATCAAGT+TGG 0.528663 4_2:+49286141 None:intergenic
GAGAAAAGCCCTCCAACTGT+TGG 0.528736 4_2:+49294587 None:intergenic
TCCCAAACAACTCTCCCTCT+TGG 0.531245 4_2:-49287122 Msa0604130:CDS
TCAGAAATGGCTATAGAAAG+AGG 0.531378 4_2:-49294566 Msa0604130:CDS
TTGACAAGCCTGACCAACCT+TGG 0.535049 4_2:+49288501 None:intergenic
CTCAAGCGACCGGTTCTTGG+TGG 0.535534 4_2:-49288941 Msa0604130:CDS
ACCATCAACTTGTTAGTCAC+TGG 0.535909 4_2:-49287444 Msa0604130:intron
AATCCTTCTGGTGTTTCAGA+TGG 0.536422 4_2:+49289091 None:intergenic
GCACAACATTATATGGATCA+AGG 0.536766 4_2:-49287642 Msa0604130:CDS
GGGAGGTTGATGGAGCTTGA+AGG 0.538098 4_2:-49286425 Msa0604130:CDS
TCCATTGTGTATCTAAAATG+TGG 0.538918 4_2:+49287208 None:intergenic
TTAGCTCGGCCGCCAATTGG+CGG 0.540332 4_2:-49287568 Msa0604130:CDS
TCATCTATGGCTGAGAAAAG+AGG 0.540800 4_2:+49288588 None:intergenic
GATTACCCTTATGCAAATGA+TGG 0.542032 4_2:-49286974 Msa0604130:CDS
AGAAACCCTTTCTCAGCTTG+AGG 0.542113 4_2:+49288537 None:intergenic
AGCCTTCAATAAACTATGCT+AGG 0.543473 4_2:-49285922 Msa0604130:three_prime_UTR
AAACACCAGAAGGATTGATA+AGG 0.546240 4_2:-49289084 Msa0604130:CDS
CTGTCCGAAGGGTCTTCTGT+AGG 0.547242 4_2:+49286644 None:intergenic
GCCTCATATGTCGACTAAGA+AGG 0.549672 4_2:-49286033 Msa0604130:three_prime_UTR
TATGAATGAGGTCATTTGGA+AGG 0.549816 4_2:+49287053 None:intergenic
GCCTTCTTAGTCGACATATG+AGG 0.550231 4_2:+49286032 None:intergenic
GAGAAGTTATGGTTATGGGA+TGG 0.550391 4_2:+49294927 None:intergenic
GAGGAAGTCAGAAAACTTGA+AGG 0.554158 4_2:-49287664 Msa0604130:CDS
TTTGGTTACTTCCAATACCA+TGG 0.556225 4_2:+49294774 None:intergenic
CATCTATGGCTGAGAAAAGA+GGG 0.557786 4_2:+49288589 None:intergenic
TTGGAGAAGGAAGGAATCAA+AGG 0.560037 4_2:-49291602 Msa0604130:CDS
CAATAGCCTATGATAAGCAT+TGG 0.560181 4_2:-49287093 Msa0604130:CDS
CTTCCAATACCATGGAGACA+TGG 0.561407 4_2:+49294782 None:intergenic
TCTTGGAGAAACGATTGAGC+CGG 0.561911 4_2:-49286495 Msa0604130:CDS
AGATATTGGTGCAGTTCTTG+TGG 0.562515 4_2:-49291504 Msa0604130:CDS
AACCCTTTCTCAGCTTGAGG+AGG 0.563546 4_2:+49288540 None:intergenic
AAAAGAGACAAAATTGGAGA+AGG 0.563624 4_2:-49291615 Msa0604130:intron
CTGAAAACTTTACGAGGCAA+TGG 0.564230 4_2:-49289046 Msa0604130:CDS
GAAGCACTTATAAATGCAGA+TGG 0.564500 4_2:-49287166 Msa0604130:CDS
GAGTTGCTTTAATTCTGAGA+AGG 0.565436 4_2:+49288698 None:intergenic
CGTTGGCGATCGAGTTAGCT+CGG 0.566042 4_2:-49287582 Msa0604130:CDS
GTCATAGCTTGAATTTGCGA+AGG 0.572643 4_2:+49286569 None:intergenic
ATGAATGAGGTCATTTGGAA+GGG 0.573787 4_2:+49287054 None:intergenic
AGTTCCCATTCGCTGTCCGA+AGG 0.574184 4_2:+49286632 None:intergenic
CCAAATGACCTCATTCATAG+AGG 0.574379 4_2:-49287049 Msa0604130:CDS
GACCATTGTTTGGATTACAT+CGG 0.574726 4_2:-49286750 Msa0604130:CDS
TGACTTACCGGGATCTAGCT+CGG 0.577812 4_2:+49294487 None:intergenic
TTTCTGACTTCCTCGACCAA+CGG 0.578983 4_2:+49287673 None:intergenic
CAGAAATGGCTATAGAAAGA+GGG 0.580132 4_2:-49294565 Msa0604130:CDS
CAATTGGCGGAAAGCCAGAA+TGG 0.580426 4_2:-49287555 Msa0604130:CDS
TTGTTGCTCAATCATTTCAG+TGG 0.580753 4_2:+49287919 None:intergenic
CTGTTCAACCAACAGTTGGA+GGG 0.583789 4_2:-49294595 Msa0604130:CDS
ACACCAGTTGAGTGCCAAGT+AGG 0.585215 4_2:+49287517 None:intergenic
TTGAACAAGCCATGTCTCCA+TGG 0.586444 4_2:-49294791 Msa0604130:CDS
GTTACTGTTCAACCAACAGT+TGG 0.586551 4_2:-49294599 Msa0604130:CDS
AAGAAACAACCTCAGACCTC+AGG 0.586613 4_2:+49285768 None:intergenic
TTTAGAGATGTAAGCAAGGT+CGG 0.587096 4_2:+49285957 None:intergenic
GATTGAGCCGGCTTGGCAAG+AGG 0.589180 4_2:-49286483 Msa0604130:CDS
TATCTTACTGTCCATTGTGG+CGG 0.591570 4_2:+49288443 None:intergenic
GAACGTACATTGTTTACAGT+CGG 0.593956 4_2:+49294949 None:intergenic
GGTTGTGAAAACAGCTGTAG+TGG 0.595530 4_2:-49288628 Msa0604130:CDS
GTTGGTCAGGCTTGTCAATG+AGG 0.596030 4_2:-49288496 Msa0604130:CDS
GTTCCCATTCGCTGTCCGAA+GGG 0.597179 4_2:+49286633 None:intergenic
TTTGGTCAGTATACTTACGC+TGG 0.598381 4_2:-49286707 Msa0604130:CDS
TGCTATAATGTAAGGCTCTG+TGG 0.599707 4_2:+49287279 None:intergenic
CATGCCTACAGAAGACCCTT+CGG 0.600883 4_2:-49286648 Msa0604130:CDS
TGGTATGAGATTAGGAATGT+TGG 0.601692 4_2:-49286845 Msa0604130:CDS
CCACTGATCTATGCGTCTGG+TGG 0.602891 4_2:+49291573 None:intergenic
TCTATTTGAGACACATGTTG+TGG 0.603437 4_2:-49286275 Msa0604130:exon
AAATGACCCTCTTATCATCA+GGG 0.603935 4_2:+49291372 None:intergenic
TTGAAGGTATAATAGATGAG+AGG 0.604595 4_2:-49286409 Msa0604130:CDS
AAATATCTTACTGTCCATTG+TGG 0.606843 4_2:+49288440 None:intergenic
TTCGCAAATTCAAGCTATGA+CGG 0.607036 4_2:-49286567 Msa0604130:CDS
CGAGCTAACTCGATCGCCAA+CGG 0.607861 4_2:+49287583 None:intergenic
TCAGGCTTGTCAATGAGGCT+AGG 0.608501 4_2:-49288491 Msa0604130:CDS
TGTGGAAAATGAGCATAGAA+GGG 0.608699 4_2:-49291486 Msa0604130:CDS
CGATCCTGAACTCAAGCGAC+CGG 0.609549 4_2:-49288951 Msa0604130:CDS
TCACAACCGGTAAAAGTGCG+TGG 0.609810 4_2:+49288643 None:intergenic
AGGACATGCTACAGTTGAAG+AGG 0.610205 4_2:-49287891 Msa0604130:intron
GGCTATTGAACTTACCAAGA+GGG 0.610590 4_2:+49287108 None:intergenic
ATAACCAAATATATTAGAGA+TGG 0.610891 4_2:-49286185 Msa0604130:three_prime_UTR
GAAGCTGAATTTGAAGTACC+AGG 0.611074 4_2:-49291536 Msa0604130:CDS
CTTCCAGTTCTACAACGCCT+AGG 0.613399 4_2:+49288902 None:intergenic
TTGTTGCATCCAATTGGTCA+CGG 0.613442 4_2:-49288128 Msa0604130:intron
TGATAGCACATTGAGACCGT+TGG 0.613528 4_2:-49287599 Msa0604130:CDS
TCATAGCTTGAATTTGCGAA+GGG 0.614455 4_2:+49286570 None:intergenic
CGGATAAAGAATTACAAGCA+TGG 0.616013 4_2:-49286868 Msa0604130:CDS
TTGTGGCGGGAGTCTCGAAA+CGG 0.619459 4_2:+49288457 None:intergenic
ACTTTACGAGGCAATGGACA+AGG 0.619463 4_2:-49289040 Msa0604130:CDS
ATGATTGAGCAACAAATCAG+AGG 0.621173 4_2:-49287911 Msa0604130:CDS
TGACAACCCTGATGATAAGA+GGG 0.622995 4_2:-49291378 Msa0604130:CDS
AAAGATCCAAATGCCCCACA+TGG 0.624536 4_2:-49287016 Msa0604130:CDS
TTTCGAGACTCCCGCCACAA+TGG 0.628813 4_2:-49288454 Msa0604130:CDS
TCATAAACCAAAAGAAACAA+AGG 0.629237 4_2:-49294718 Msa0604130:CDS
CCCCGATGTAATCCAAACAA+TGG 0.629499 4_2:+49286748 None:intergenic
GAGATTAGGAATGTTGGTCA+CGG 0.631846 4_2:-49286839 Msa0604130:CDS
TGAGTCAAGAACTGTTGAGT+CGG 0.633371 4_2:-49286888 Msa0604130:CDS
TACATCGGGGCATCATGCTG+CGG 0.637437 4_2:-49286735 Msa0604130:CDS
AATATCACTCCTGAGGTCTG+AGG 0.640887 4_2:-49285777 Msa0604130:three_prime_UTR
TACGATGTGTATAATGACCT+CGG 0.643812 4_2:-49288986 Msa0604130:CDS
GTAACAATGTCTATGTTCCG+AGG 0.644422 4_2:-49288728 Msa0604130:CDS
AAGAAAGAATATCACTCCTG+AGG 0.644702 4_2:-49285784 Msa0604130:three_prime_UTR
CCACCAGACGCATAGATCAG+TGG 0.649521 4_2:-49291573 Msa0604130:CDS
GTGACCAATTGGATGCAACA+AGG 0.655202 4_2:+49288130 None:intergenic
CCATTGTTTGGATTACATCG+GGG 0.657108 4_2:-49286748 Msa0604130:CDS
TAACAATGTCTATGTTCCGA+GGG 0.658588 4_2:-49288727 Msa0604130:CDS
TTACCATCTGAAACACCAGA+AGG 0.662031 4_2:-49289094 Msa0604130:CDS
TTGGCGGAAAGCCAGAATGG+AGG 0.667120 4_2:-49287552 Msa0604130:CDS
ACTCTTTAGAGATGTAAGCA+AGG 0.680106 4_2:+49285953 None:intergenic
GGTAGCCAGAGTCATGAGCA+AGG 0.680144 4_2:+49287464 None:intergenic
TAAACCAAAAGAAACAAAGG+AGG 0.689233 4_2:-49294715 Msa0604130:CDS
AGGCTATTGAACTTACCAAG+AGG 0.696886 4_2:+49287107 None:intergenic
GTGCAGCAAAATCAAAGCTG+TGG 0.713390 4_2:-49294675 Msa0604130:CDS
GACCTACCTGTATCGCAACG+AGG 0.720571 4_2:+49288878 None:intergenic
ACTTGACAAAATATCCAACA+CGG 0.724220 4_2:+49286538 None:intergenic
ATAAAGAATTACAAGCATGG+TGG 0.729305 4_2:-49286865 Msa0604130:CDS
GAGGAACTGAAAACTTTACG+AGG 0.731350 4_2:-49289052 Msa0604130:CDS
TATGACGGTGATGACCGTGT+TGG 0.742214 4_2:-49286552 Msa0604130:CDS
TGTTGGTTGAACAGTAACTG+TGG 0.746011 4_2:+49294604 None:intergenic
GATCGCTGTCTGGATCACCG+AGG 0.822626 4_2:+49288969 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAATAATTTAAATAAA+GGG + chr4_2:49287283-49287302 None:intergenic 0.0%
!! ATATATATATATATATATTA+TGG + chr4_2:49289390-49289409 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTTTTTA+AGG - chr4_2:49290384-49290403 Msa0604130:intron 0.0%
!! AAATAAAAAAAATAAAAAAA+AGG + chr4_2:49292623-49292642 None:intergenic 0.0%
!!! CATGTTTTTAAAAAAAATTA+GGG - chr4_2:49286698-49286717 Msa0604130:CDS 10.0%
!!! TAATTTTATTTAATTACTAG+AGG - chr4_2:49286930-49286949 Msa0604130:CDS 10.0%
!! TAAATTATTAATTAGAAAGA+TGG + chr4_2:49287195-49287214 None:intergenic 10.0%
!! TAATTAAATCTCATTAAAAT+AGG - chr4_2:49287474-49287493 Msa0604130:CDS 10.0%
!!! AAAAAATGATCAAATATTTT+TGG + chr4_2:49287566-49287585 None:intergenic 10.0%
!!! AATATTTGATCATTTTTTTA+AGG - chr4_2:49287568-49287587 Msa0604130:CDS 10.0%
!!! ATCAATTTTAATATATACAA+TGG + chr4_2:49287635-49287654 None:intergenic 10.0%
!! ATATAGAAAAAAATTGTTTA+AGG - chr4_2:49288103-49288122 Msa0604130:intron 10.0%
!! TATAGAAAAAAATTGTTTAA+GGG - chr4_2:49288104-49288123 Msa0604130:intron 10.0%
!!! CAATTAATTTTATTTTTGTT+TGG + chr4_2:49289007-49289026 None:intergenic 10.0%
!! AATTTATACTAGTTAAAAAA+AGG - chr4_2:49289561-49289580 Msa0604130:intron 10.0%
!! AAAAAAAAAAAAAATTTGAC+AGG + chr4_2:49290376-49290395 None:intergenic 10.0%
!! AAATATTGTCATAAAATTAT+TGG - chr4_2:49290572-49290591 Msa0604130:intron 10.0%
!! AATATTGTCATAAAATTATT+GGG - chr4_2:49290573-49290592 Msa0604130:intron 10.0%
!!! TAATTGTATAATAATTTTAG+GGG + chr4_2:49290821-49290840 None:intergenic 10.0%
!!! GATAATTGTATAATAATTTT+AGG + chr4_2:49290823-49290842 None:intergenic 10.0%
!!! TAAAATATACTTTTACAAAT+TGG - chr4_2:49290851-49290870 Msa0604130:intron 10.0%
!!! ATTAATTTTACTAAGAAATA+GGG + chr4_2:49291423-49291442 None:intergenic 10.0%
!!! TATTAATTTTACTAAGAAAT+AGG + chr4_2:49291424-49291443 None:intergenic 10.0%
!!! TAATATTTTCTTTTTAACAA+AGG - chr4_2:49292325-49292344 Msa0604130:intron 10.0%
!!! TATAATGTTAAATAAAGTTT+TGG - chr4_2:49294494-49294513 Msa0604130:intron 10.0%
!!! AAATTATATTTTTTTATTGG+GGG + chr4_2:49294628-49294647 None:intergenic 10.0%
!!! ATTAGATTTTATAAACAAAA+AGG - chr4_2:49294650-49294669 Msa0604130:CDS 10.0%
!!! TAAAACAAATTTTAATATAC+GGG + chr4_2:49294699-49294718 None:intergenic 10.0%
!!! CTAAAACAAATTTTAATATA+CGG + chr4_2:49294700-49294719 None:intergenic 10.0%
!!! CCTAATTTTTTTTAAAAACA+TGG + chr4_2:49286700-49286719 None:intergenic 15.0%
!!! CCATGTTTTTAAAAAAAATT+AGG - chr4_2:49286697-49286716 Msa0604130:CDS 15.0%
!!! TATAGAAAAACTTTTTTTTC+AGG + chr4_2:49287086-49287105 None:intergenic 15.0%
!! TATGTATCATATTTATATAC+AGG + chr4_2:49287226-49287245 None:intergenic 15.0%
!! GTTTAAATAAAGGATAAAAA+TGG + chr4_2:49287409-49287428 None:intergenic 15.0%
!! AATATTATTTAATTGTTGTG+TGG + chr4_2:49287505-49287524 None:intergenic 15.0%
!!! AATATTTTTGGCAAATAATA+AGG + chr4_2:49287554-49287573 None:intergenic 15.0%
!! TTCATTAGCAATATTATAAA+AGG - chr4_2:49287732-49287751 Msa0604130:intron 15.0%
!! CAATATTATCTATACTATAT+GGG + chr4_2:49288175-49288194 None:intergenic 15.0%
!! ACAATATTATCTATACTATA+TGG + chr4_2:49288176-49288195 None:intergenic 15.0%
!! ACAAAATAAAAGATTATGAA+AGG + chr4_2:49288768-49288787 None:intergenic 15.0%
!!! TTTTATTTTGTGTTTTGATT+TGG - chr4_2:49288777-49288796 Msa0604130:intron 15.0%
!!! ATTAATTGACCTTTTTTTTT+AGG - chr4_2:49289019-49289038 Msa0604130:CDS 15.0%
!!! TTAATTGACCTTTTTTTTTA+GGG - chr4_2:49289020-49289039 Msa0604130:CDS 15.0%
!! AATTAATTCCCTAAAAAAAA+AGG + chr4_2:49289031-49289050 None:intergenic 15.0%
!! TAACTAGTATAAATTGAATT+CGG + chr4_2:49289556-49289575 None:intergenic 15.0%
!! TTTGATCAAATTATTCAAAT+TGG - chr4_2:49289658-49289677 Msa0604130:intron 15.0%
!!! TTGTGACATTTAATTTATTT+TGG - chr4_2:49290024-49290043 Msa0604130:intron 15.0%
!!! TGTGACATTTAATTTATTTT+GGG - chr4_2:49290025-49290044 Msa0604130:intron 15.0%
!!! ATTTTATGACAATATTTTAG+AGG + chr4_2:49290569-49290588 None:intergenic 15.0%
!! ATATTGTCATAAAATTATTG+GGG - chr4_2:49290574-49290593 Msa0604130:intron 15.0%
!! ATTTATTCATTAACAAAATG+TGG - chr4_2:49291204-49291223 Msa0604130:intron 15.0%
!! TCATGTACTTATTATTTAAT+TGG - chr4_2:49291323-49291342 Msa0604130:intron 15.0%
!!! TTAATTTTACTAAGAAATAG+GGG + chr4_2:49291422-49291441 None:intergenic 15.0%
!!! CATTTAACATGTAAATTTTT+TGG + chr4_2:49291485-49291504 None:intergenic 15.0%
!! TGTATATGAAATTAATGATA+GGG + chr4_2:49292358-49292377 None:intergenic 15.0%
!! TTGTATATGAAATTAATGAT+AGG + chr4_2:49292359-49292378 None:intergenic 15.0%
!! AAATAAAAAAAAGGTAACAT+AGG + chr4_2:49292614-49292633 None:intergenic 15.0%
!! AGTATACTTTCAAATAAAAT+TGG + chr4_2:49292655-49292674 None:intergenic 15.0%
!!! ATGATTTTATTTTTTTGACT+TGG + chr4_2:49293351-49293370 None:intergenic 15.0%
!!! AAAACAAATTTTAATATACG+GGG + chr4_2:49294698-49294717 None:intergenic 15.0%
!! CACCTAAAAATAAAAATTAT+TGG - chr4_2:49294724-49294743 Msa0604130:CDS 15.0%
!!! GTCCAATAATTTTTATTTTT+AGG + chr4_2:49294729-49294748 None:intergenic 15.0%
!!! ATGATTGATAATAAAAAAGA+TGG + chr4_2:49294888-49294907 None:intergenic 15.0%
!!! TTTTTTTACCTAAAGCAATA+AGG - chr4_2:49286368-49286387 Msa0604130:CDS 20.0%
!! TTGAAGAAAACTACATTTAA+GGG + chr4_2:49286809-49286828 None:intergenic 20.0%
!! TTTGAAGAAAACTACATTTA+AGG + chr4_2:49286810-49286829 None:intergenic 20.0%
!! TATAGAAAGAGATATCAATT+TGG - chr4_2:49287001-49287020 Msa0604130:CDS 20.0%
!! ATCATATTTATATACAGGTA+TGG + chr4_2:49287221-49287240 None:intergenic 20.0%
!! ATAAAGAGGATATATCAATT+TGG + chr4_2:49287823-49287842 None:intergenic 20.0%
!! TAACGCGTATAAATTATTAA+CGG - chr4_2:49287906-49287925 Msa0604130:CDS 20.0%
!!! AAGATAAACATAGTCTTTTT+GGG + chr4_2:49288011-49288030 None:intergenic 20.0%
!!! AAAGATAAACATAGTCTTTT+TGG + chr4_2:49288012-49288031 None:intergenic 20.0%
!! ATTACTAACATTATCAACAT+TGG - chr4_2:49288327-49288346 Msa0604130:intron 20.0%
!! CAAAATAAGTTCAATTCAAA+CGG - chr4_2:49288682-49288701 Msa0604130:CDS 20.0%
!! AAAATAAGTTCAATTCAAAC+GGG - chr4_2:49288683-49288702 Msa0604130:CDS 20.0%
!! TGTTAGATTATAATTATTCG+TGG - chr4_2:49288825-49288844 Msa0604130:intron 20.0%
!! TATATATATATTATGGAGCT+GGG + chr4_2:49289383-49289402 None:intergenic 20.0%
!! ATATATATATATTATGGAGC+TGG + chr4_2:49289384-49289403 None:intergenic 20.0%
!!! ATTTGATTTTCTATTCTCAA+AGG - chr4_2:49289799-49289818 Msa0604130:intron 20.0%
!! TTAAGAGACTTAAAAAAGTA+GGG + chr4_2:49289885-49289904 None:intergenic 20.0%
!! ATTAAGAGACTTAAAAAAGT+AGG + chr4_2:49289886-49289905 None:intergenic 20.0%
!!! TTCTTTATGAGCATTTTATT+TGG - chr4_2:49289973-49289992 Msa0604130:intron 20.0%
!!! GTGACATTTAATTTATTTTG+GGG - chr4_2:49290026-49290045 Msa0604130:intron 20.0%
!!! TGAATCATTGGTTATTTTAT+GGG - chr4_2:49290135-49290154 Msa0604130:intron 20.0%
!!! GCAAATTTTCTAAAAAGAAA+TGG + chr4_2:49290199-49290218 None:intergenic 20.0%
!!! TAATTTTACTAAGAAATAGG+GGG + chr4_2:49291421-49291440 None:intergenic 20.0%
!!! TTTAATACTGCTTCATTTTT+AGG + chr4_2:49291878-49291897 None:intergenic 20.0%
!! AGTGAAATTATTAATGCTTA+TGG + chr4_2:49291921-49291940 None:intergenic 20.0%
!! TAAGCATTAATAATTTCACT+CGG - chr4_2:49291921-49291940 Msa0604130:intron 20.0%
!! GTATATGAAATTAATGATAG+GGG + chr4_2:49292357-49292376 None:intergenic 20.0%
!! TATTTGAATTTACTCATCAA+TGG - chr4_2:49292469-49292488 Msa0604130:intron 20.0%
!! ATTTGAATTTACTCATCAAT+GGG - chr4_2:49292470-49292489 Msa0604130:intron 20.0%
!!! AAGAGGTATGTTTTTATTTA+AGG - chr4_2:49292831-49292850 Msa0604130:intron 20.0%
!!! AGAGGTATGTTTTTATTTAA+GGG - chr4_2:49292832-49292851 Msa0604130:intron 20.0%
!! AGTTAGTACCATTAAATAAA+GGG + chr4_2:49292897-49292916 None:intergenic 20.0%
!! TAGTTAGTACCATTAAATAA+AGG + chr4_2:49292898-49292917 None:intergenic 20.0%
!! AAATGAAACAATTCAATTAC+AGG - chr4_2:49292959-49292978 Msa0604130:intron 20.0%
!! ACAAAAGTGAAAATCAATTA+AGG + chr4_2:49293385-49293404 None:intergenic 20.0%
!!! AATCTTCTATTGTTAGTTTT+AGG + chr4_2:49293715-49293734 None:intergenic 20.0%
!!! TCATCATTTGTTTTCAAATT+AGG + chr4_2:49293917-49293936 None:intergenic 20.0%
!! ATAACCAAATATATTAGAGA+TGG - chr4_2:49294520-49294539 Msa0604130:CDS 20.0%
!!! AATGATTAACCATTTTTTCA+TGG + chr4_2:49294861-49294880 None:intergenic 20.0%
!!! TTCTTTTGGTTTATGAACAA+AGG + chr4_2:49285983-49286002 None:intergenic 25.0%
! TCATAAACCAAAAGAAACAA+AGG - chr4_2:49285987-49286006 Msa0604130:three_prime_UTR 25.0%
!!! TTAACTTTGGAATTTAGGTT+GGG - chr4_2:49286244-49286263 Msa0604130:three_prime_UTR 25.0%
!!! CATTTTAAGCTGTTTTTAAC+TGG + chr4_2:49286743-49286762 None:intergenic 25.0%
! AAATAAGCACAGTAGAAAAA+CGG + chr4_2:49286978-49286997 None:intergenic 25.0%
! AGTGTTATATAGTGTTCTTA+TGG - chr4_2:49287105-49287124 Msa0604130:CDS 25.0%
! TGGTTAAATCTCACTAAAAT+AGG + chr4_2:49287175-49287194 None:intergenic 25.0%
!! AAATATGATACATAGCTTTG+TGG - chr4_2:49287232-49287251 Msa0604130:CDS 25.0%
! TAATCAGCAATCTACATAAA+TGG - chr4_2:49287662-49287681 Msa0604130:CDS 25.0%
! TAGGTAGTAGTAATATAAAG+AGG + chr4_2:49287837-49287856 None:intergenic 25.0%
! TTACTACTACCTAAAAAAAG+AGG - chr4_2:49287844-49287863 Msa0604130:intron 25.0%
! ATTATCTATACTATATGGGA+AGG + chr4_2:49288171-49288190 None:intergenic 25.0%
!! AACATTATCAACATTGGTTA+CGG - chr4_2:49288333-49288352 Msa0604130:intron 25.0%
!! TCATTTTACGTTCTAATAAG+AGG + chr4_2:49288378-49288397 None:intergenic 25.0%
! AAATAAGTTCAATTCAAACG+GGG - chr4_2:49288684-49288703 Msa0604130:CDS 25.0%
!!! ACGTCAATTTTAGCATATAT+TGG + chr4_2:49288974-49288993 None:intergenic 25.0%
! GGGAAAAATACAAGTAATTA+AGG + chr4_2:49289056-49289075 None:intergenic 25.0%
!!! TTGTATTTTTCCCTTGTTTT+TGG - chr4_2:49289063-49289082 Msa0604130:CDS 25.0%
!! TCTTTTTGAACCAAAAACAA+GGG + chr4_2:49289076-49289095 None:intergenic 25.0%
! ATAAAGCAAATTGTTCTTGA+TGG - chr4_2:49289250-49289269 Msa0604130:intron 25.0%
!! TCAATTTTTCTTGTGAATCA+TGG - chr4_2:49289290-49289309 Msa0604130:intron 25.0%
!! CAATTTTTCTTGTGAATCAT+GGG - chr4_2:49289291-49289310 Msa0604130:intron 25.0%
! GTTATTGTTTGTCTAAACAT+AGG - chr4_2:49289765-49289784 Msa0604130:intron 25.0%
! TGTATGGCTATCAATTTATA+CGG + chr4_2:49290106-49290125 None:intergenic 25.0%
! TGATTCACAAAAAAACTGTA+TGG + chr4_2:49290122-49290141 None:intergenic 25.0%
!!! ACAGTTTTTTTGTGAATCAT+TGG - chr4_2:49290123-49290142 Msa0604130:intron 25.0%
!!! GTGAATCATTGGTTATTTTA+TGG - chr4_2:49290134-49290153 Msa0604130:intron 25.0%
!!! TTGGTTATTTTATGGGTTTT+TGG - chr4_2:49290142-49290161 Msa0604130:intron 25.0%
!!! TTTTTTTTTAAGGAAAGCCT+AGG - chr4_2:49290394-49290413 Msa0604130:intron 25.0%
!! GACTTTGTTAGTCAATTTTA+GGG + chr4_2:49290711-49290730 None:intergenic 25.0%
!! AGACTTTGTTAGTCAATTTT+AGG + chr4_2:49290712-49290731 None:intergenic 25.0%
! TTTACAAATTGGAAAACTTG+AGG - chr4_2:49290862-49290881 Msa0604130:intron 25.0%
! TGTTAATCTTTCAATTCTCT+AGG + chr4_2:49290938-49290957 None:intergenic 25.0%
! AAAAAAAACTTGAGTGTGTT+TGG - chr4_2:49290970-49290989 Msa0604130:intron 25.0%
! AAGAATGTAATGTAATGTTG+AGG - chr4_2:49291070-49291089 Msa0604130:intron 25.0%
! AATAAGTACATGACATTGAT+AGG + chr4_2:49291316-49291335 None:intergenic 25.0%
!!! CACGTACAATTTTAATTATG+AGG - chr4_2:49291515-49291534 Msa0604130:CDS 25.0%
! AGTTAAATCCTTCATTGAAA+AGG + chr4_2:49292143-49292162 None:intergenic 25.0%
! AAACTTGACCCTAAAATTTA+TGG - chr4_2:49292743-49292762 Msa0604130:intron 25.0%
!! TAGCATTTCCCTTTATTTAA+TGG - chr4_2:49292886-49292905 Msa0604130:intron 25.0%
!!! ATTGATTTTCACTTTTGTTC+AGG - chr4_2:49293387-49293406 Msa0604130:intron 25.0%
!!! AAATGATGGTCTTATTCTTT+GGG - chr4_2:49293745-49293764 Msa0604130:intron 25.0%
!! AAGTTGGATTGGATATAATT+TGG + chr4_2:49294551-49294570 None:intergenic 25.0%
! ATAGTTTATTGAAGGCTAAA+TGG + chr4_2:49294780-49294799 None:intergenic 25.0%
! AATGAGAAACCATGAAAAAA+TGG - chr4_2:49294849-49294868 Msa0604130:exon 25.0%
AAAGAGAAGTTATGAGAAGA+GGG + chr4_2:49285805-49285824 None:intergenic 30.0%
TCTTTCTGCAAGAGTTAAAA+GGG - chr4_2:49285820-49285839 Msa0604130:three_prime_UTR 30.0%
TTGTTCAAGATGAGACAATT+TGG + chr4_2:49285902-49285921 None:intergenic 30.0%
! AACCAAACATGTTTTCATGT+TGG - chr4_2:49285947-49285966 Msa0604130:three_prime_UTR 30.0%
ATCCAACATGAAAACATGTT+TGG + chr4_2:49285952-49285971 None:intergenic 30.0%
TAAACCAAAAGAAACAAAGG+AGG - chr4_2:49285990-49286009 Msa0604130:three_prime_UTR 30.0%
TGATGACATAACAGATTTGT+TGG - chr4_2:49286165-49286184 Msa0604130:three_prime_UTR 30.0%
! GATGACATAACAGATTTGTT+GGG - chr4_2:49286166-49286185 Msa0604130:three_prime_UTR 30.0%
!! CACTCTTAACTTTGGAATTT+AGG - chr4_2:49286239-49286258 Msa0604130:three_prime_UTR 30.0%
!! CTTAACTTTGGAATTTAGGT+TGG - chr4_2:49286243-49286262 Msa0604130:three_prime_UTR 30.0%
CTATATAATCAGTGAGTGTT+TGG + chr4_2:49286875-49286894 None:intergenic 30.0%
! ACACTCACTGATTATATAGT+TGG - chr4_2:49286876-49286895 Msa0604130:CDS 30.0%
ATATAGTGTTCTTATGGTAG+TGG - chr4_2:49287111-49287130 Msa0604130:CDS 30.0%
TTGTTCCTATAGTGTTCTTA+TGG - chr4_2:49287136-49287155 Msa0604130:CDS 30.0%
CGTTAGCGCAATAAAAAAAA+CGG + chr4_2:49287891-49287910 None:intergenic 30.0%
AATAAGAGGAATTGCTCATT+TGG + chr4_2:49288364-49288383 None:intergenic 30.0%
TTTCTTACTTCTACCAGATA+AGG + chr4_2:49288923-49288942 None:intergenic 30.0%
! CTCTTTTTGAACCAAAAACA+AGG + chr4_2:49289077-49289096 None:intergenic 30.0%
GGTTCAAAAAGAGACAAAAT+TGG - chr4_2:49289084-49289103 Msa0604130:CDS 30.0%
AAAAGAGACAAAATTGGAGA+AGG - chr4_2:49289090-49289109 Msa0604130:CDS 30.0%
GATTCACAAGAAAAATTGAC+AGG + chr4_2:49289289-49289308 None:intergenic 30.0%
GGATAATGATGAAACCTTAT+TGG + chr4_2:49289362-49289381 None:intergenic 30.0%
ACATCAATGTCTAACACAAA+TGG - chr4_2:49289496-49289515 Msa0604130:intron 30.0%
TAGACAAACAATAACACTCA+TGG + chr4_2:49289760-49289779 None:intergenic 30.0%
! GATGTCATTTAAATCTCACT+TGG - chr4_2:49289821-49289840 Msa0604130:intron 30.0%
TTTAAATCTCACTTGGAACT+AGG - chr4_2:49289828-49289847 Msa0604130:intron 30.0%
TTAAATCTCACTTGGAACTA+GGG - chr4_2:49289829-49289848 Msa0604130:intron 30.0%
AAAAGTAGGGCTTGAAATTT+AGG + chr4_2:49289872-49289891 None:intergenic 30.0%
TTATACGGCTCTTCAAAATT+TGG + chr4_2:49290091-49290110 None:intergenic 30.0%
!!! TACTCTACTGTTTTTTTGAC+AGG + chr4_2:49290268-49290287 None:intergenic 30.0%
!!! TGTTTTTTTTTCCCTTTGAC+AGG + chr4_2:49290302-49290321 None:intergenic 30.0%
AAAAAACAGTGTAGTACAAG+TGG - chr4_2:49290321-49290340 Msa0604130:intron 30.0%
GAGGAAATTCAAATACTTTG+AGG - chr4_2:49291026-49291045 Msa0604130:intron 30.0%
TTGAGGTGAATTTCATTGTT+TGG - chr4_2:49291043-49291062 Msa0604130:intron 30.0%
TGAGGAAATGTAATGTTATG+AGG - chr4_2:49291088-49291107 Msa0604130:intron 30.0%
GAGGAAATGTAATGTTATGA+GGG - chr4_2:49291089-49291108 Msa0604130:intron 30.0%
AATTTGTCCAATAGTGTGTT+TGG + chr4_2:49291181-49291200 None:intergenic 30.0%
!!! GATTTTGATTGATGTCAAGA+TGG - chr4_2:49291244-49291263 Msa0604130:intron 30.0%
CAAAAGAGAAGAATTGATCA+GGG + chr4_2:49291580-49291599 None:intergenic 30.0%
TCAAAAGAGAAGAATTGATC+AGG + chr4_2:49291581-49291600 None:intergenic 30.0%
ATTGATAAGGTTAAGAGAAG+AGG - chr4_2:49291634-49291653 Msa0604130:intron 30.0%
!!! TTTTTAGGATGCTAACTCTT+AGG + chr4_2:49291863-49291882 None:intergenic 30.0%
! TTACTTCTTTTCTCAGACAA+CGG + chr4_2:49291961-49291980 None:intergenic 30.0%
TTCAGCAAATACCTTACAAT+CGG - chr4_2:49292035-49292054 Msa0604130:intron 30.0%
TTCATTGAAAAGGTCATCTA+TGG + chr4_2:49292133-49292152 None:intergenic 30.0%
! ATAGATGACCTTTTCAATGA+AGG - chr4_2:49292132-49292151 Msa0604130:intron 30.0%
AAATATCTTACTGTCCATTG+TGG + chr4_2:49292268-49292287 None:intergenic 30.0%
TAAAAGTTAGTTACGCTAGT+TGG + chr4_2:49292407-49292426 None:intergenic 30.0%
!!! CAAATTTTTTTGTGTCGTGT+AGG - chr4_2:49292703-49292722 Msa0604130:intron 30.0%
! GTACAACTTCTTCTGTTTTA+TGG + chr4_2:49292985-49293004 None:intergenic 30.0%
AGAAAAAATCGTAGTAGTCT+AGG + chr4_2:49293010-49293029 None:intergenic 30.0%
TATGAAAGAATAAACCGTCT+TGG - chr4_2:49293284-49293303 Msa0604130:intron 30.0%
! CTGTTTGTTGCTATAATGTA+AGG + chr4_2:49293437-49293456 None:intergenic 30.0%
! GGAAGTAATAGTTTGTAGAT+TGG + chr4_2:49293479-49293498 None:intergenic 30.0%
! TCCACATTTTAGATACACAA+TGG - chr4_2:49293496-49293515 Msa0604130:intron 30.0%
! TCCATTGTGTATCTAAAATG+TGG + chr4_2:49293500-49293519 None:intergenic 30.0%
AAATTGCCAATGCTTATCAT+AGG + chr4_2:49293621-49293640 None:intergenic 30.0%
TAAGACCATCATTTGCATAA+GGG + chr4_2:49293739-49293758 None:intergenic 30.0%
ATAAGACCATCATTTGCATA+AGG + chr4_2:49293740-49293759 None:intergenic 30.0%
!! CAAATGATGGTCTTATTCTT+TGG - chr4_2:49293744-49293763 Msa0604130:intron 30.0%
! TTTGGGATACTATCAAATCT+TGG - chr4_2:49293762-49293781 Msa0604130:intron 30.0%
TTGGGATACTATCAAATCTT+GGG - chr4_2:49293763-49293782 Msa0604130:intron 30.0%
TTGACTCATTGTTATAGTAG+TGG + chr4_2:49293805-49293824 None:intergenic 30.0%
ATAAAGAATTACAAGCATGG+TGG - chr4_2:49293840-49293859 Msa0604130:intron 30.0%
! TGGATATTTTCCTAATAGAC+CGG - chr4_2:49294018-49294037 Msa0604130:intron 30.0%
ACTTGACAAAATATCCAACA+CGG + chr4_2:49294170-49294189 None:intergenic 30.0%
! TCAAAAGCAGCTTTAATCAT+CGG + chr4_2:49294250-49294269 None:intergenic 30.0%
!! CTGCTTTTGAAAAGTTCAAA+GGG - chr4_2:49294260-49294279 Msa0604130:intron 30.0%
! TTGAAGGTATAATAGATGAG+AGG - chr4_2:49294296-49294315 Msa0604130:intron 30.0%
ATGAAGTTCAGGAATAGAAA+TGG - chr4_2:49294328-49294347 Msa0604130:intron 30.0%
TCTCAAATAGAGACACTATA+TGG + chr4_2:49294421-49294440 None:intergenic 30.0%
CACACCATCTCTAATATATT+TGG + chr4_2:49294527-49294546 None:intergenic 30.0%
!! ACTTTAGTGACCTTACTTTT+GGG + chr4_2:49294592-49294611 None:intergenic 30.0%
TTCCTAGCATAGTTTATTGA+AGG + chr4_2:49294788-49294807 None:intergenic 30.0%
CATTTCATTCCACTATTTCA+TGG + chr4_2:49294833-49294852 None:intergenic 30.0%
GAACGTACATTGTTTACAGT+CGG + chr4_2:49285759-49285778 None:intergenic 35.0%
GAAAGAGAAGTTATGAGAAG+AGG + chr4_2:49285806-49285825 None:intergenic 35.0%
CTCTTTCTGCAAGAGTTAAA+AGG - chr4_2:49285819-49285838 Msa0604130:three_prime_UTR 35.0%
TTTGGTTACTTCCAATACCA+TGG + chr4_2:49285934-49285953 None:intergenic 35.0%
!! ACAACCTCCTTTGTTTCTTT+TGG + chr4_2:49285997-49286016 None:intergenic 35.0%
AGAAACAAAGGAGGTTGTTT+AGG - chr4_2:49285999-49286018 Msa0604130:three_prime_UTR 35.0%
TCAGAAATGGCTATAGAAAG+AGG - chr4_2:49286139-49286158 Msa0604130:three_prime_UTR 35.0%
CAGAAATGGCTATAGAAAGA+GGG - chr4_2:49286140-49286159 Msa0604130:three_prime_UTR 35.0%
GTTGGGTAAATCAATTCTCT+TGG - chr4_2:49286183-49286202 Msa0604130:three_prime_UTR 35.0%
AAAGTTAAGAGTGACTTACC+GGG + chr4_2:49286232-49286251 None:intergenic 35.0%
CAAAGTTAAGAGTGACTTAC+CGG + chr4_2:49286233-49286252 None:intergenic 35.0%
TACCTAAAGCAATAAGGCAA+AGG - chr4_2:49286374-49286393 Msa0604130:CDS 35.0%
!!! AGGCAAAGGCTGATTTTTTA+CGG - chr4_2:49286388-49286407 Msa0604130:CDS 35.0%
AAAAATGCCACTACAAACGT+GGG - chr4_2:49286619-49286638 Msa0604130:CDS 35.0%
CACTACCATAAGAACACTAT+AGG + chr4_2:49287113-49287132 None:intergenic 35.0%
CTATAGTGTTCTTATGGTAG+TGG - chr4_2:49287142-49287161 Msa0604130:CDS 35.0%
!!! GTGAGTACTCCTCTTTTTTT+AGG + chr4_2:49287856-49287875 None:intergenic 35.0%
TACTATATGGGAAGGAGATA+GGG + chr4_2:49288163-49288182 None:intergenic 35.0%
ATACTATATGGGAAGGAGAT+AGG + chr4_2:49288164-49288183 None:intergenic 35.0%
!!! TACATCGAGTGTCATTTTGT+TGG + chr4_2:49288710-49288729 None:intergenic 35.0%
TAAGTACAAGATGTGACAAG+AGG + chr4_2:49288851-49288870 None:intergenic 35.0%
TTAACCTCATATGCCTTATC+TGG - chr4_2:49288907-49288926 Msa0604130:CDS 35.0%
!!! TAGCAGAACGTTGTTTTTCT+AGG - chr4_2:49288945-49288964 Msa0604130:CDS 35.0%
!!! AGCAGAACGTTGTTTTTCTA+GGG - chr4_2:49288946-49288965 Msa0604130:CDS 35.0%
!! TTTGAAGTACCAGGAAGTTT+TGG - chr4_2:49289178-49289197 Msa0604130:intron 35.0%
TTGTGGAAAATGAGCATAGA+AGG - chr4_2:49289218-49289237 Msa0604130:intron 35.0%
TGTGGAAAATGAGCATAGAA+GGG - chr4_2:49289219-49289238 Msa0604130:intron 35.0%
AAATGACCCTCTTATCATCA+GGG + chr4_2:49289336-49289355 None:intergenic 35.0%
AAAATGACCCTCTTATCATC+AGG + chr4_2:49289337-49289356 None:intergenic 35.0%
!!! GAGGGTCATTTTTTCCAATA+AGG - chr4_2:49289345-49289364 Msa0604130:intron 35.0%
AAACAGTAGAGTAGTACAAG+TGG - chr4_2:49290275-49290294 Msa0604130:intron 35.0%
!! GTCACGTTTTAAACAATCCT+AGG + chr4_2:49290414-49290433 None:intergenic 35.0%
GACGAATCATTTCCTATTCA+GGG + chr4_2:49290616-49290635 None:intergenic 35.0%
TGACGAATCATTTCCTATTC+AGG + chr4_2:49290617-49290636 None:intergenic 35.0%
TTTGCAATTTCTCTGCATTC+AGG - chr4_2:49290747-49290766 Msa0604130:intron 35.0%
TTGCAATTTCTCTGCATTCA+GGG - chr4_2:49290748-49290767 Msa0604130:intron 35.0%
! TTCTCTAGGAAAAGAGACTT+TGG + chr4_2:49290924-49290943 None:intergenic 35.0%
AAACTTGAGTGTGTTTGGAT+TGG - chr4_2:49290975-49290994 Msa0604130:intron 35.0%
AACTTGAGTGTGTTTGGATT+GGG - chr4_2:49290976-49290995 Msa0604130:intron 35.0%
GGTGAATTTCATTGTTTGGA+TGG - chr4_2:49291047-49291066 Msa0604130:intron 35.0%
GAGGGAATTCAAATACTTTC+AGG - chr4_2:49291107-49291126 Msa0604130:intron 35.0%
TGTGTTTGGATGAGGTAATT+TGG + chr4_2:49291167-49291186 None:intergenic 35.0%
! GAAATCTCACTTGGTGAAAT+TGG + chr4_2:49291397-49291416 None:intergenic 35.0%
AAACACCAGAAGGATTGATA+AGG - chr4_2:49291621-49291640 Msa0604130:intron 35.0%
CTTAACCTTATCAATCCTTC+TGG + chr4_2:49291629-49291648 None:intergenic 35.0%
TACGATGTGTATAATGACCT+CGG - chr4_2:49291719-49291738 Msa0604130:intron 35.0%
TAACAATGTCTATGTTCCGA+GGG - chr4_2:49291978-49291997 Msa0604130:intron 35.0%
! GAGTTGCTTTAATTCTGAGA+AGG + chr4_2:49292010-49292029 None:intergenic 35.0%
TGAATTTACTCATCAATGGG+TGG - chr4_2:49292473-49292492 Msa0604130:intron 35.0%
AATGGGTGGTGATTTGAATA+TGG - chr4_2:49292487-49292506 Msa0604130:intron 35.0%
!!! AGGACAGATTCTTTTGGTTT+AGG - chr4_2:49292513-49292532 Msa0604130:intron 35.0%
!!! GGACAGATTCTTTTGGTTTA+GGG - chr4_2:49292514-49292533 Msa0604130:intron 35.0%
TGGTTTAGGGATGAAGAATT+TGG - chr4_2:49292527-49292546 Msa0604130:intron 35.0%
TAATCCTTGTTGCATCCAAT+TGG - chr4_2:49292571-49292590 Msa0604130:intron 35.0%
!!! TTTTTTGTGTCGTGTAGGAA+TGG - chr4_2:49292708-49292727 Msa0604130:intron 35.0%
! CAGCAGGACCATAAATTTTA+GGG + chr4_2:49292754-49292773 None:intergenic 35.0%
! TCAGCAGGACCATAAATTTT+AGG + chr4_2:49292755-49292774 None:intergenic 35.0%
TTGTTGCTCAATCATTTCAG+TGG + chr4_2:49292789-49292808 None:intergenic 35.0%
ATGATTGAGCAACAAATCAG+AGG - chr4_2:49292794-49292813 Msa0604130:intron 35.0%
! CTTGAAGGCACAACATTATA+TGG - chr4_2:49293056-49293075 Msa0604130:intron 35.0%
GCACAACATTATATGGATCA+AGG - chr4_2:49293063-49293082 Msa0604130:intron 35.0%
! GAAGCACTTATAAATGCAGA+TGG - chr4_2:49293539-49293558 Msa0604130:intron 35.0%
CAATAGCCTATGATAAGCAT+TGG - chr4_2:49293612-49293631 Msa0604130:intron 35.0%
ATGAATGAGGTCATTTGGAA+GGG + chr4_2:49293654-49293673 None:intergenic 35.0%
TATGAATGAGGTCATTTGGA+AGG + chr4_2:49293655-49293674 None:intergenic 35.0%
!!! TTGTTAGTTTTAGGCCATGT+GGG + chr4_2:49293706-49293725 None:intergenic 35.0%
!!! ATTGTTAGTTTTAGGCCATG+TGG + chr4_2:49293707-49293726 None:intergenic 35.0%
GATTACCCTTATGCAAATGA+TGG - chr4_2:49293731-49293750 Msa0604130:intron 35.0%
CGGATAAAGAATTACAAGCA+TGG - chr4_2:49293837-49293856 Msa0604130:intron 35.0%
TGGTATGAGATTAGGAATGT+TGG - chr4_2:49293860-49293879 Msa0604130:intron 35.0%
ACAAAAAAGATGAACCTTGG+TGG - chr4_2:49293891-49293910 Msa0604130:intron 35.0%
AAATAGTGACGACCATTGTT+TGG - chr4_2:49293945-49293964 Msa0604130:intron 35.0%
GACCATTGTTTGGATTACAT+CGG - chr4_2:49293955-49293974 Msa0604130:intron 35.0%
ACCATTGTTTGGATTACATC+GGG - chr4_2:49293956-49293975 Msa0604130:intron 35.0%
!! GGAACTTTTCTTTGAGAAAC+CGG - chr4_2:49294090-49294109 Msa0604130:intron 35.0%
TCATAGCTTGAATTTGCGAA+GGG + chr4_2:49294138-49294157 None:intergenic 35.0%
TTCGCAAATTCAAGCTATGA+CGG - chr4_2:49294138-49294157 Msa0604130:intron 35.0%
! TATTTTGTCAAGTCATTCGC+CGG - chr4_2:49294177-49294196 Msa0604130:intron 35.0%
!!! GCTGCTTTTGAAAAGTTCAA+AGG - chr4_2:49294259-49294278 Msa0604130:intron 35.0%
!! CTTTTGAAAAGTTCAAAGGG+AGG - chr4_2:49294263-49294282 Msa0604130:intron 35.0%
GGAATGCTAATATGAAGTTC+AGG - chr4_2:49294317-49294336 Msa0604130:intron 35.0%
! TCTATTTGAGACACATGTTG+TGG - chr4_2:49294430-49294449 Msa0604130:intron 35.0%
!! TGGATGTAATCAAGTTGGAT+TGG + chr4_2:49294562-49294581 None:intergenic 35.0%
! GACTTTAGTGACCTTACTTT+TGG + chr4_2:49294593-49294612 None:intergenic 35.0%
TTTAGAGATGTAAGCAAGGT+CGG + chr4_2:49294751-49294770 None:intergenic 35.0%
! ACTCTTTAGAGATGTAAGCA+AGG + chr4_2:49294755-49294774 None:intergenic 35.0%
AGCCTTCAATAAACTATGCT+AGG - chr4_2:49294783-49294802 Msa0604130:CDS 35.0%
CACTATTTCATGGCATATGT+AGG + chr4_2:49294823-49294842 None:intergenic 35.0%
CTACATATGCCATGAAATAG+TGG - chr4_2:49294821-49294840 Msa0604130:CDS 35.0%
AAGAAAGAATATCACTCCTG+AGG - chr4_2:49294921-49294940 Msa0604130:five_prime_UTR 35.0%
GAGAAGTTATGGTTATGGGA+TGG + chr4_2:49285781-49285800 None:intergenic 40.0%
GGGAGAGAAGTTATGGTTAT+GGG + chr4_2:49285785-49285804 None:intergenic 40.0%
AGGGAGAGAAGTTATGGTTA+TGG + chr4_2:49285786-49285805 None:intergenic 40.0%
! GTTTTCATGTTGGATCGTCA+AGG - chr4_2:49285957-49285976 Msa0604130:three_prime_UTR 40.0%
AACAAAGGAGGTTGTTTAGG+AGG - chr4_2:49286002-49286021 Msa0604130:three_prime_UTR 40.0%
! TGTTGGTTGAACAGTAACTG+TGG + chr4_2:49286104-49286123 None:intergenic 40.0%
GTTACTGTTCAACCAACAGT+TGG - chr4_2:49286106-49286125 Msa0604130:three_prime_UTR 40.0%
CGGTAAGTCACTCTTAACTT+TGG - chr4_2:49286231-49286250 Msa0604130:three_prime_UTR 40.0%
GTTGGGTGCAATAAGATAGT+CGG - chr4_2:49286261-49286280 Msa0604130:three_prime_UTR 40.0%
! AGCCTTTGCCTTATTGCTTT+AGG + chr4_2:49286379-49286398 None:intergenic 40.0%
CAAAAATGCCACTACAAACG+TGG - chr4_2:49286618-49286637 Msa0604130:CDS 40.0%
TCAGTGAGTGTTTGGATTGA+AGG + chr4_2:49286867-49286886 None:intergenic 40.0%
GAAAAACGGATAAACGAGAG+TGG + chr4_2:49286964-49286983 None:intergenic 40.0%
!!! TGTGACACATAGTTTTGACG+TGG - chr4_2:49287373-49287392 Msa0604130:intron 40.0%
ATAGAAAGAGCAAGAGCAAG+AGG - chr4_2:49287793-49287812 Msa0604130:intron 40.0%
TCTACCAGATAAGGCATATG+AGG + chr4_2:49288914-49288933 None:intergenic 40.0%
!!! GCAGAACGTTGTTTTTCTAG+GGG - chr4_2:49288947-49288966 Msa0604130:CDS 40.0%
GAGACAAAATTGGAGAAGGA+AGG - chr4_2:49289094-49289113 Msa0604130:CDS 40.0%
TTGGAGAAGGAAGGAATCAA+AGG - chr4_2:49289103-49289122 Msa0604130:CDS 40.0%
! GAAGCTGAATTTGAAGTACC+AGG - chr4_2:49289169-49289188 Msa0604130:intron 40.0%
CCAATATCTCCAAAACTTCC+TGG + chr4_2:49289190-49289209 None:intergenic 40.0%
!!! CCAGGAAGTTTTGGAGATAT+TGG - chr4_2:49289187-49289206 Msa0604130:intron 40.0%
AGATATTGGTGCAGTTCTTG+TGG - chr4_2:49289201-49289220 Msa0604130:intron 40.0%
ATGACAACCCTGATGATAAG+AGG - chr4_2:49289326-49289345 Msa0604130:intron 40.0%
TGACAACCCTGATGATAAGA+GGG - chr4_2:49289327-49289346 Msa0604130:intron 40.0%
TAGTTTGATCCCGAGTTTGT+TGG - chr4_2:49290059-49290078 Msa0604130:intron 40.0%
TTGGTTTCCACCAACAAACT+CGG + chr4_2:49290072-49290091 None:intergenic 40.0%
AACAGTGTAGTACAAGTGGT+CGG - chr4_2:49290325-49290344 Msa0604130:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+AGG - chr4_2:49290601-49290620 Msa0604130:intron 40.0%
ACTAACGAAGTCTGCATTCA+GGG + chr4_2:49290647-49290666 None:intergenic 40.0%
ACTAACAGAGTCTACATGCA+GGG + chr4_2:49290679-49290698 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + chr4_2:49290601-49290620 None:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + chr4_2:49290600-49290619 None:intergenic 40.0%
ACTTGAGTGTGTTTGGATTG+GGG - chr4_2:49290977-49290996 Msa0604130:intron 40.0%
! TGTTTGGATTGGGGAATGTT+TGG - chr4_2:49290986-49291005 Msa0604130:intron 40.0%
ACCTCATCCAAACACACTAT+TGG - chr4_2:49291171-49291190 Msa0604130:intron 40.0%
TCCAATAGTGTGTTTGGATG+AGG + chr4_2:49291175-49291194 None:intergenic 40.0%
! TTACCATCTGAAACACCAGA+AGG - chr4_2:49291611-49291630 Msa0604130:CDS 40.0%
AATCCTTCTGGTGTTTCAGA+TGG + chr4_2:49291617-49291636 None:intergenic 40.0%
GAGGAACTGAAAACTTTACG+AGG - chr4_2:49291653-49291672 Msa0604130:intron 40.0%
CTGAAAACTTTACGAGGCAA+TGG - chr4_2:49291659-49291678 Msa0604130:intron 40.0%
GCAAAGAACATCCATATCCT+AGG - chr4_2:49291786-49291805 Msa0604130:intron 40.0%
GTAACAATGTCTATGTTCCG+AGG - chr4_2:49291977-49291996 Msa0604130:intron 40.0%
!! ACTACAGCTGTTTTCACAAC+CGG + chr4_2:49292078-49292097 None:intergenic 40.0%
CATCTATGGCTGAGAAAAGA+GGG + chr4_2:49292119-49292138 None:intergenic 40.0%
TCATCTATGGCTGAGAAAAG+AGG + chr4_2:49292120-49292139 None:intergenic 40.0%
TATCTTACTGTCCATTGTGG+CGG + chr4_2:49292265-49292284 None:intergenic 40.0%
TGGTGATTTGAATATGGCAG+AGG - chr4_2:49292493-49292512 Msa0604130:intron 40.0%
TTTGGAAGACAGACTATAGC+AGG - chr4_2:49292545-49292564 Msa0604130:intron 40.0%
TTGTTGCATCCAATTGGTCA+CGG - chr4_2:49292577-49292596 Msa0604130:intron 40.0%
! AGAAGTATACCGTGACCAAT+TGG + chr4_2:49292589-49292608 None:intergenic 40.0%
!! GGGTCAAGTTTGCTTTTCAA+TGG + chr4_2:49292734-49292753 None:intergenic 40.0%
!!! CTACGATTTTTTCTTGCCGT+TGG - chr4_2:49293016-49293035 Msa0604130:intron 40.0%
GAGGAAGTCAGAAAACTTGA+AGG - chr4_2:49293041-49293060 Msa0604130:intron 40.0%
!! ACCATCAACTTGTTAGTCAC+TGG - chr4_2:49293261-49293280 Msa0604130:intron 40.0%
! ACCAGTGACTAACAAGTTGA+TGG + chr4_2:49293265-49293284 None:intergenic 40.0%
TATCGAATCGAAAGCCAAGA+CGG + chr4_2:49293301-49293320 None:intergenic 40.0%
TGCTATAATGTAAGGCTCTG+TGG + chr4_2:49293429-49293448 None:intergenic 40.0%
GGCTATTGAACTTACCAAGA+GGG + chr4_2:49293600-49293619 None:intergenic 40.0%
AGGCTATTGAACTTACCAAG+AGG + chr4_2:49293601-49293620 None:intergenic 40.0%
CCTCTATGAATGAGGTCATT+TGG + chr4_2:49293659-49293678 None:intergenic 40.0%
CCAAATGACCTCATTCATAG+AGG - chr4_2:49293656-49293675 Msa0604130:intron 40.0%
!!! TGTTAGTTTTAGGCCATGTG+GGG + chr4_2:49293705-49293724 None:intergenic 40.0%
TGAGTCAAGAACTGTTGAGT+CGG - chr4_2:49293817-49293836 Msa0604130:intron 40.0%
AAGCATGGTGGTATGAGATT+AGG - chr4_2:49293852-49293871 Msa0604130:intron 40.0%
GAGATTAGGAATGTTGGTCA+CGG - chr4_2:49293866-49293885 Msa0604130:intron 40.0%
GCGACAAAAAAGATGAACCT+TGG - chr4_2:49293888-49293907 Msa0604130:intron 40.0%
! GTTTTCAAATTAGGCCACCA+AGG + chr4_2:49293908-49293927 None:intergenic 40.0%
CCATTGTTTGGATTACATCG+GGG - chr4_2:49293957-49293976 Msa0604130:intron 40.0%
TTTGGTCAGTATACTTACGC+TGG - chr4_2:49293998-49294017 Msa0604130:intron 40.0%
! CACTTCAACAATGTCACTTC+CGG + chr4_2:49294112-49294131 None:intergenic 40.0%
GTCATAGCTTGAATTTGCGA+AGG + chr4_2:49294139-49294158 None:intergenic 40.0%
TCTCCAAGATATTCCTCATC+CGG + chr4_2:49294199-49294218 None:intergenic 40.0%
AAAGTTCAAAGGGAGGTTGA+TGG - chr4_2:49294270-49294289 Msa0604130:intron 40.0%
TTCAGGAATAGAAATGGTGC+TGG - chr4_2:49294334-49294353 Msa0604130:intron 40.0%
! GTTGGCTTCAAAAGCTCATA+AGG + chr4_2:49294367-49294386 None:intergenic 40.0%
GTCACTAAAGTCCTCACTTT+AGG - chr4_2:49294601-49294620 Msa0604130:CDS 40.0%
GAGAAGAGGGAGAGAAGTTA+TGG + chr4_2:49285792-49285811 None:intergenic 45.0%
TTGAACAAGCCATGTCTCCA+TGG - chr4_2:49285914-49285933 Msa0604130:three_prime_UTR 45.0%
AAGCCATGTCTCCATGGTAT+TGG - chr4_2:49285920-49285939 Msa0604130:three_prime_UTR 45.0%
CTTCCAATACCATGGAGACA+TGG + chr4_2:49285926-49285945 None:intergenic 45.0%
GTGCAGCAAAATCAAAGCTG+TGG - chr4_2:49286030-49286049 Msa0604130:three_prime_UTR 45.0%
ACTGTTCAACCAACAGTTGG+AGG - chr4_2:49286109-49286128 Msa0604130:three_prime_UTR 45.0%
CTGTTCAACCAACAGTTGGA+GGG - chr4_2:49286110-49286129 Msa0604130:three_prime_UTR 45.0%
! TGGAGGGCTTTTCTCAGAAA+TGG - chr4_2:49286126-49286145 Msa0604130:three_prime_UTR 45.0%
AGCTTCGTTTCAACACTCGT+TGG + chr4_2:49286560-49286579 None:intergenic 45.0%
CTCTATACCCACGTTTGTAG+TGG + chr4_2:49286629-49286648 None:intergenic 45.0%
CACTACAAACGTGGGTATAG+AGG - chr4_2:49286627-49286646 Msa0604130:CDS 45.0%
! GGGAAGGAGATAGGGATTTT+AGG + chr4_2:49288155-49288174 None:intergenic 45.0%
! GTTCTTGATGGCTTTCTCAC+TGG - chr4_2:49289262-49289281 Msa0604130:intron 45.0%
ATCATCAGGGTTGTCATGCT+TGG + chr4_2:49289323-49289342 None:intergenic 45.0%
!! TTTGATCCCGAGTTTGTTGG+TGG - chr4_2:49290062-49290081 Msa0604130:intron 45.0%
TGGTTTCCACCAACAAACTC+GGG + chr4_2:49290071-49290090 None:intergenic 45.0%
AGTACAAGTGGTCCTGTCAA+AGG - chr4_2:49290287-49290306 Msa0604130:intron 45.0%
GTACAAGTGGTCCTGTCAAA+GGG - chr4_2:49290288-49290307 Msa0604130:intron 45.0%
ACAGTGTAGTACAAGTGGTC+GGG - chr4_2:49290326-49290345 Msa0604130:intron 45.0%
GACTAACGAAGTCTGCATTC+AGG + chr4_2:49290648-49290667 None:intergenic 45.0%
GACTAACAGAGTCTACATGC+AGG + chr4_2:49290680-49290699 None:intergenic 45.0%
TGACTACTCCTTTCCCATTC+AGG - chr4_2:49290778-49290797 Msa0604130:intron 45.0%
GACTACTCCTTTCCCATTCA+GGG - chr4_2:49290779-49290798 Msa0604130:intron 45.0%
CTTTAGTCCCTGAATGGGAA+AGG + chr4_2:49290789-49290808 None:intergenic 45.0%
! TTGGATTGGGGAATGTTTGG+AGG - chr4_2:49290989-49291008 Msa0604130:intron 45.0%
! TGGATTGGGGAATGTTTGGA+GGG - chr4_2:49290990-49291009 Msa0604130:intron 45.0%
GGAGGGAATGTAATGTTACG+AGG - chr4_2:49291007-49291026 Msa0604130:intron 45.0%
ATAGGGGGTGAAATCTCACT+TGG + chr4_2:49291406-49291425 None:intergenic 45.0%
ACTTTACGAGGCAATGGACA+AGG - chr4_2:49291665-49291684 Msa0604130:intron 45.0%
TGTTCTTTGCCACCAAGAAC+CGG + chr4_2:49291776-49291795 None:intergenic 45.0%
GTTCTACAACGCCTAGGATA+TGG + chr4_2:49291800-49291819 None:intergenic 45.0%
! TATCCTAGGCGTTGTAGAAC+TGG - chr4_2:49291800-49291819 Msa0604130:intron 45.0%
GGTTGTGAAAACAGCTGTAG+TGG - chr4_2:49292077-49292096 Msa0604130:intron 45.0%
!! GCTGTAGTGGACAAGAATCT+TGG - chr4_2:49292090-49292109 Msa0604130:intron 45.0%
AGAAACCCTTTCTCAGCTTG+AGG + chr4_2:49292171-49292190 None:intergenic 45.0%
ATCTTACTGTCCATTGTGGC+GGG + chr4_2:49292264-49292283 None:intergenic 45.0%
! TGGCAGAGGACAGATTCTTT+TGG - chr4_2:49292507-49292526 Msa0604130:intron 45.0%
GTGACCAATTGGATGCAACA+AGG + chr4_2:49292578-49292597 None:intergenic 45.0%
!! GTGGTTATTGCTGATTCAGC+AGG + chr4_2:49292770-49292789 None:intergenic 45.0%
AGGACATGCTACAGTTGAAG+AGG - chr4_2:49292814-49292833 Msa0604130:intron 45.0%
TCATGCTAACTAGTGCGTCT+GGG - chr4_2:49292855-49292874 Msa0604130:intron 45.0%
!!! TTTTTTCTTGCCGTTGGTCG+AGG - chr4_2:49293022-49293041 Msa0604130:intron 45.0%
TTTCTGACTTCCTCGACCAA+CGG + chr4_2:49293035-49293054 None:intergenic 45.0%
ACGGTCTCAATGTGCTATCA+TGG + chr4_2:49293106-49293125 None:intergenic 45.0%
TGATAGCACATTGAGACCGT+TGG - chr4_2:49293106-49293125 Msa0604130:intron 45.0%
GTAAAGACTTGCCTCCATTC+TGG + chr4_2:49293167-49293186 None:intergenic 45.0%
GGCAAGTCTTTACACCTACT+TGG - chr4_2:49293174-49293193 Msa0604130:intron 45.0%
! ACTCAACTGGTGTTTGGCTT+TGG - chr4_2:49293198-49293217 Msa0604130:intron 45.0%
ATGAGCAAGGACATGAGCTT+TGG + chr4_2:49293231-49293250 None:intergenic 45.0%
ACCAAGAGGGAGAGTTGTTT+GGG + chr4_2:49293587-49293606 None:intergenic 45.0%
TACCAAGAGGGAGAGTTGTT+TGG + chr4_2:49293588-49293607 None:intergenic 45.0%
CTGCTAGTCCTCTATGAATG+AGG + chr4_2:49293667-49293686 None:intergenic 45.0%
AAAGATCCAAATGCCCCACA+TGG - chr4_2:49293689-49293708 Msa0604130:intron 45.0%
CCCCGATGTAATCCAAACAA+TGG + chr4_2:49293960-49293979 None:intergenic 45.0%
! CATCATGCTGCGGTGAATTT+TGG - chr4_2:49293980-49293999 Msa0604130:intron 45.0%
!! ATGTTGTTTCGTGCAATGGC+CGG + chr4_2:49294040-49294059 None:intergenic 45.0%
!! AGGCATGTTGTTTCGTGCAA+TGG + chr4_2:49294044-49294063 None:intergenic 45.0%
TCTTGGAGAAACGATTGAGC+CGG - chr4_2:49294210-49294229 Msa0604130:intron 45.0%
! ACACCTTTTCCTGTTACACC+AGG + chr4_2:49294397-49294416 None:intergenic 45.0%
GCGCTTGGATGTAATCAAGT+TGG + chr4_2:49294567-49294586 None:intergenic 45.0%
TTATTGGGGGACCTAAAGTG+AGG + chr4_2:49294615-49294634 None:intergenic 45.0%
! GCCTCATATGTCGACTAAGA+AGG - chr4_2:49294672-49294691 Msa0604130:CDS 45.0%
GCCTTCTTAGTCGACATATG+AGG + chr4_2:49294676-49294695 None:intergenic 45.0%
AATATCACTCCTGAGGTCTG+AGG - chr4_2:49294928-49294947 Msa0604130:five_prime_UTR 45.0%
AAGAAACAACCTCAGACCTC+AGG + chr4_2:49294940-49294959 None:intergenic 45.0%
!! GTATAAAATAATTTAAATAA+AGG + chr4_2:49287284-49287303 None:intergenic 5.0%
!! ATAAAAAATAGTTTAAATAA+AGG + chr4_2:49287419-49287438 None:intergenic 5.0%
!! TTGTTTAATATTTAAATAAA+TGG - chr4_2:49288288-49288307 Msa0604130:intron 5.0%
!! TTAATTAATTATTTAATTGT+TGG + chr4_2:49288407-49288426 None:intergenic 5.0%
!! AAAATAAAATTTAGTATAAT+TGG - chr4_2:49290241-49290260 Msa0604130:intron 5.0%
!!! ATAATTGTATAATAATTTTA+GGG + chr4_2:49290822-49290841 None:intergenic 5.0%
!!! TTTAAAAAATTTAAAATTCT+AGG + chr4_2:49291140-49291159 None:intergenic 5.0%
!!! AAAATTATATTTTTTTATTG+GGG + chr4_2:49294629-49294648 None:intergenic 5.0%
!!! GAAAATTATATTTTTTTATT+GGG + chr4_2:49294630-49294649 None:intergenic 5.0%
!!! TGAAAATTATATTTTTTTAT+TGG + chr4_2:49294631-49294650 None:intergenic 5.0%
GAGAAAAGCCCTCCAACTGT+TGG + chr4_2:49286121-49286140 None:intergenic 50.0%
TGACTTACCGGGATCTAGCT+CGG + chr4_2:49286221-49286240 None:intergenic 50.0%
CTTCCACTGATCTATGCGTC+TGG + chr4_2:49289138-49289157 None:intergenic 50.0%
TTGAGTTCAGGATCGCTGTC+TGG + chr4_2:49291749-49291768 None:intergenic 50.0%
CTTCCAGTTCTACAACGCCT+AGG + chr4_2:49291806-49291825 None:intergenic 50.0%
TCTGAGAAGGATTCGTCCCT+CGG + chr4_2:49291997-49292016 None:intergenic 50.0%
TGCGTGGAAAGCCGATTGTA+AGG + chr4_2:49292049-49292068 None:intergenic 50.0%
! GGCTTTCCACGCACTTTTAC+CGG - chr4_2:49292056-49292075 Msa0604130:intron 50.0%
! TCACAACCGGTAAAAGTGCG+TGG + chr4_2:49292065-49292084 None:intergenic 50.0%
TTGCCTCCTCAAGCTGAGAA+AGG - chr4_2:49292162-49292181 Msa0604130:intron 50.0%
TGCCTCCTCAAGCTGAGAAA+GGG - chr4_2:49292163-49292182 Msa0604130:intron 50.0%
AACCCTTTCTCAGCTTGAGG+AGG + chr4_2:49292168-49292187 None:intergenic 50.0%
TTCTTGCGTCTGTGTTGCCA+AGG - chr4_2:49292187-49292206 Msa0604130:intron 50.0%
TTGACAAGCCTGACCAACCT+TGG + chr4_2:49292207-49292226 None:intergenic 50.0%
GTTGGTCAGGCTTGTCAATG+AGG - chr4_2:49292209-49292228 Msa0604130:intron 50.0%
TCAGGCTTGTCAATGAGGCT+AGG - chr4_2:49292214-49292233 Msa0604130:intron 50.0%
GTCATGCTAACTAGTGCGTC+TGG - chr4_2:49292854-49292873 Msa0604130:intron 50.0%
!! CATTCTGGCTTTCCGCCAAT+TGG + chr4_2:49293152-49293171 None:intergenic 50.0%
CAATTGGCGGAAAGCCAGAA+TGG - chr4_2:49293150-49293169 Msa0604130:intron 50.0%
ACACCTACTTGGCACTCAAC+TGG - chr4_2:49293185-49293204 Msa0604130:intron 50.0%
ACACCAGTTGAGTGCCAAGT+AGG + chr4_2:49293191-49293210 None:intergenic 50.0%
CTTGGCACTCAACTGGTGTT+TGG - chr4_2:49293192-49293211 Msa0604130:intron 50.0%
!! CAACTGGTGTTTGGCTTTGG+AGG - chr4_2:49293201-49293220 Msa0604130:intron 50.0%
CATGTCCTTGCTCATGACTC+TGG - chr4_2:49293236-49293255 Msa0604130:intron 50.0%
TCCCAAACAACTCTCCCTCT+TGG - chr4_2:49293583-49293602 Msa0604130:intron 50.0%
! TTTAGGCCATGTGGGGCATT+TGG + chr4_2:49293698-49293717 None:intergenic 50.0%
CATGCCTACAGAAGACCCTT+CGG - chr4_2:49294057-49294076 Msa0604130:intron 50.0%
TATGACGGTGATGACCGTGT+TGG - chr4_2:49294153-49294172 Msa0604130:intron 50.0%
TCGCCGGATGAGGAATATCT+TGG - chr4_2:49294193-49294212 Msa0604130:intron 50.0%
TTGAAGCCAACATCAGAGCC+TGG - chr4_2:49294376-49294395 Msa0604130:intron 50.0%
! GTTACACCAGGCTCTGATGT+TGG + chr4_2:49294385-49294404 None:intergenic 50.0%
ACATCAGAGCCTGGTGTAAC+AGG - chr4_2:49294385-49294404 Msa0604130:intron 50.0%
GAGCCTGGTGTAACAGGAAA+AGG - chr4_2:49294391-49294410 Msa0604130:intron 50.0%
GTTAGCTCCGAGCTAGATCC+CGG - chr4_2:49286211-49286230 Msa0604130:three_prime_UTR 55.0%
CCACTGATCTATGCGTCTGG+TGG + chr4_2:49289135-49289154 None:intergenic 55.0%
CCACCAGACGCATAGATCAG+TGG - chr4_2:49289132-49289151 Msa0604130:intron 55.0%
CGATCCTGAACTCAAGCGAC+CGG - chr4_2:49291754-49291773 Msa0604130:intron 55.0%
AGAACCGGTCGCTTGAGTTC+AGG + chr4_2:49291761-49291780 None:intergenic 55.0%
! GAACTCAAGCGACCGGTTCT+TGG - chr4_2:49291761-49291780 Msa0604130:intron 55.0%
GGAAGACCTCGTTGCGATAC+AGG - chr4_2:49291821-49291840 Msa0604130:intron 55.0%
GACCTCGTTGCGATACAGGT+AGG - chr4_2:49291825-49291844 Msa0604130:intron 55.0%
GACCTACCTGTATCGCAACG+AGG + chr4_2:49291830-49291849 None:intergenic 55.0%
TGCGTCTGTGTTGCCAAGGT+TGG - chr4_2:49292191-49292210 Msa0604130:intron 55.0%
! CTGTGTTGCCAAGGTTGGTC+AGG - chr4_2:49292196-49292215 Msa0604130:intron 55.0%
! TTGTGGCGGGAGTCTCGAAA+CGG + chr4_2:49292251-49292270 None:intergenic 55.0%
TTTCGAGACTCCCGCCACAA+TGG - chr4_2:49292251-49292270 Msa0604130:intron 55.0%
! AACTAGTGCGTCTGGGACAC+TGG - chr4_2:49292862-49292881 Msa0604130:intron 55.0%
CGAGCTAACTCGATCGCCAA+CGG + chr4_2:49293125-49293144 None:intergenic 55.0%
CGTTGGCGATCGAGTTAGCT+CGG - chr4_2:49293123-49293142 Msa0604130:intron 55.0%
!! TCTGGCTTTCCGCCAATTGG+CGG + chr4_2:49293149-49293168 None:intergenic 55.0%
TTGGCGGAAAGCCAGAATGG+AGG - chr4_2:49293153-49293172 Msa0604130:intron 55.0%
GGTAGCCAGAGTCATGAGCA+AGG + chr4_2:49293244-49293263 None:intergenic 55.0%
! TACATCGGGGCATCATGCTG+CGG - chr4_2:49293970-49293989 Msa0604130:intron 55.0%
CGTGCAATGGCCGGTCTATT+AGG + chr4_2:49294031-49294050 None:intergenic 55.0%
CTGTCCGAAGGGTCTTCTGT+AGG + chr4_2:49294064-49294083 None:intergenic 55.0%
AAGACCCTTCGGACAGCGAA+TGG - chr4_2:49294068-49294087 Msa0604130:intron 55.0%
AGACCCTTCGGACAGCGAAT+GGG - chr4_2:49294069-49294088 Msa0604130:intron 55.0%
GTTCCCATTCGCTGTCCGAA+GGG + chr4_2:49294075-49294094 None:intergenic 55.0%
AGTTCCCATTCGCTGTCCGA+AGG + chr4_2:49294076-49294095 None:intergenic 55.0%
GTCAAGTCATTCGCCGGATG+AGG - chr4_2:49294183-49294202 Msa0604130:intron 55.0%
GAGAAACGATTGAGCCGGCT+TGG - chr4_2:49294215-49294234 Msa0604130:intron 55.0%
! ATCGGTTCCTCTTGCCAAGC+CGG + chr4_2:49294232-49294251 None:intergenic 55.0%
!! GGGAGGTTGATGGAGCTTGA+AGG - chr4_2:49294280-49294299 Msa0604130:intron 55.0%
!! CCTTACTTTTGGGCTGCGCT+TGG + chr4_2:49294582-49294601 None:intergenic 55.0%
CCAAGCGCAGCCCAAAAGTA+AGG - chr4_2:49294579-49294598 Msa0604130:CDS 55.0%
GATCGCTGTCTGGATCACCG+AGG + chr4_2:49291739-49291758 None:intergenic 60.0%
! CTCAAGCGACCGGTTCTTGG+TGG - chr4_2:49291764-49291783 Msa0604130:intron 60.0%
GAGTTAGCTCGGCCGCCAAT+TGG - chr4_2:49293134-49293153 Msa0604130:intron 60.0%
TTAGCTCGGCCGCCAATTGG+CGG - chr4_2:49293137-49293156 Msa0604130:intron 60.0%
!! GATTGAGCCGGCTTGGCAAG+AGG - chr4_2:49294222-49294241 Msa0604130:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 49285754 49294973 49285754 ID=Msa0604130;Name=Msa0604130
chr4_2 mRNA 49285754 49294973 49285754 ID=Msa0604130-mRNA-1;Parent=Msa0604130;Name=Msa0604130-mRNA-1;_AED=0.09;_eAED=0.09;_QI=118|1|1|1|1|1|8|535|906
chr4_2 exon 49285754 49287318 49285754 ID=Msa0604130-mRNA-1:exon:11406;Parent=Msa0604130-mRNA-1
chr4_2 exon 49287445 49287746 49287445 ID=Msa0604130-mRNA-1:exon:11405;Parent=Msa0604130-mRNA-1
chr4_2 exon 49287892 49288002 49287892 ID=Msa0604130-mRNA-1:exon:11404;Parent=Msa0604130-mRNA-1
chr4_2 exon 49288129 49288214 49288129 ID=Msa0604130-mRNA-1:exon:11403;Parent=Msa0604130-mRNA-1
chr4_2 exon 49288451 49288771 49288451 ID=Msa0604130-mRNA-1:exon:11402;Parent=Msa0604130-mRNA-1
chr4_2 exon 49288885 49289122 49288885 ID=Msa0604130-mRNA-1:exon:11401;Parent=Msa0604130-mRNA-1
chr4_2 exon 49291361 49291632 49291361 ID=Msa0604130-mRNA-1:exon:11400;Parent=Msa0604130-mRNA-1
chr4_2 exon 49294495 49294973 49294495 ID=Msa0604130-mRNA-1:exon:11399;Parent=Msa0604130-mRNA-1
chr4_2 five_prime_UTR 49294856 49294973 49294856 ID=Msa0604130-mRNA-1:five_prime_utr;Parent=Msa0604130-mRNA-1
chr4_2 CDS 49294495 49294855 49294495 ID=Msa0604130-mRNA-1:cds;Parent=Msa0604130-mRNA-1
chr4_2 CDS 49291361 49291632 49291361 ID=Msa0604130-mRNA-1:cds;Parent=Msa0604130-mRNA-1
chr4_2 CDS 49288885 49289122 49288885 ID=Msa0604130-mRNA-1:cds;Parent=Msa0604130-mRNA-1
chr4_2 CDS 49288451 49288771 49288451 ID=Msa0604130-mRNA-1:cds;Parent=Msa0604130-mRNA-1
chr4_2 CDS 49288129 49288214 49288129 ID=Msa0604130-mRNA-1:cds;Parent=Msa0604130-mRNA-1
chr4_2 CDS 49287892 49288002 49287892 ID=Msa0604130-mRNA-1:cds;Parent=Msa0604130-mRNA-1
chr4_2 CDS 49287445 49287746 49287445 ID=Msa0604130-mRNA-1:cds;Parent=Msa0604130-mRNA-1
chr4_2 CDS 49286289 49287318 49286289 ID=Msa0604130-mRNA-1:cds;Parent=Msa0604130-mRNA-1
chr4_2 three_prime_UTR 49285754 49286288 49285754 ID=Msa0604130-mRNA-1:three_prime_utr;Parent=Msa0604130-mRNA-1
Gene Sequence

>Msa0604130

ATGCTTATGCAACAAATAAGTTTAAAGCCAAATTGTCTCATCTTGAACAAGCCATGTCTCCATGGTATTGGAAGTAACCAAACATGTTTTCATGTTGGATCGTCAAGGCCTTTGTTCATAAACCAAAAGAAACAAAGGAGGTTGTTTAGGAGGAATGAGTGCAGCAAAATCAAAGCTGTGGCTGTGAGTGATGAAGAACTTATAGAACAGCAATCAGTAAAAGTAACAGCCACAGTTACTGTTCAACCAACAGTTGGAGGGCTTTTCTCAGAAATGGCTATAGAAAGAGGGCTTGATGACATAACAGATTTGTTGGGTAAATCAATTCTCTTGGAGTTTGTTAGCTCCGAGCTAGATCCCGAGACAAAATTGGAGAAGGAAGGAATCAAAGGTTACGTCCACCAGACGCATAGATCAGTGGAAGAGATTAAATATGAAGCTGAATTTGAAGTACCAGGAAGTTTTGGAGATATTGGTGCAGTTCTTGTGGAAAATGAGCATAGAAGGGAAATGTTTATAAAGCAAATTGTTCTTGATGGCTTTCTCACTGGTCCTGTCAATTTTTCTTGTGAATCATGGGTTCATTCCAAGCATGACAACCCTGATGATAAGAGGGTCATTTTTTCCAATAAGTCATATTTACCATCTGAAACACCAGAAGGATTGATAAGGTTAAGAGAAGAGGAACTGAAAACTTTACGAGGCAATGGACAAGGCGAACGCAAGAAATTTGATAGAATATACGATTACGATGTGTATAATGACCTCGGTGATCCAGACAGCGATCCTGAACTCAAGCGACCGGTTCTTGGTGGCAAAGAACATCCATATCCTAGGCGTTGTAGAACTGGAAGACCTCGTTGCGATACAGATCCGTTGTCTGAGAAAAGAAGTAACAATGTCTATGTTCCGAGGGACGAATCCTTCTCAGAATTAAAGCAACTCTCGTTTTCAGCAAATACCTTACAATCGGCTTTCCACGCACTTTTACCGGTTGTGAAAACAGCTGTAGTGGACAAGAATCTTGGATTCCCTCTTTTCTCAGCCATAGATGACCTTTTCAATGAAGGATTTAACTTGCCTCCTCAAGCTGAGAAAGGGTTTCTTGCGTCTGTGTTGCCAAGGTTGGTCAGGCTTGTCAATGAGGCTAGGAATGACATTCTCCGTTTCGAGACTCCCGCCACAATGGACAAGGACAGATTCTTTTGGTTTAGGGATGAAGAATTTGGAAGACAGACTATAGCAGGTCTTAATCCTTGTTGCATCCAATTGGTCACGGAATGGCCATTGAAAAGCAAACTTGACCCTAAAATTTATGGTCCTGCTGAATCAGCAATAACCACTGAAATGATTGAGCAACAAATCAGAGGACATGCTACAGTTGAAGAGGCCATAAAACAGAAGAAGTTGTACATCCTAGACTACTACGATTTTTTCTTGCCGTTGGTCGAGGAAGTCAGAAAACTTGAAGGCACAACATTATATGGATCAAGGACATTGTTCTTTCTGAACCATGATAGCACATTGAGACCGTTGGCGATCGAGTTAGCTCGGCCGCCAATTGGCGGAAAGCCAGAATGGAGGCAAGTCTTTACACCTACTTGGCACTCAACTGGTGTTTGGCTTTGGAGGCTTGCCAAAGCTCATGTCCTTGCTCATGACTCTGGCTACCATCAACTTGTTAGTCACTGGTTGAGAACTCATTGTGCCACAGAGCCTTACATTATAGCAACAAACAGACAACTAAGTGCAATGCATCCAATCTACAAACTATTACTTCCACATTTTAGATACACAATGGAAATCAATGCACTTGCACGTGAAGCACTTATAAATGCAGATGGAATAATTGAGAGTAGTTTCACTCCCAAACAACTCTCCCTCTTGGTAAGTTCAATAGCCTATGATAAGCATTGGCAATTTGACTTGCAAGCCCTTCCAAATGACCTCATTCATAGAGGACTAGCAGAAAAAGATCCAAATGCCCCACATGGCCTAAAACTAACAATAGAAGATTACCCTTATGCAAATGATGGTCTTATTCTTTGGGATACTATCAAATCTTGGGTCACTGATTATGTTAACCACTACTATAACAATGAGTCAAGAACTGTTGAGTCGGATAAAGAATTACAAGCATGGTGGTATGAGATTAGGAATGTTGGTCACGGCGACAAAAAAGATGAACCTTGGTGGCCTAATTTGAAAACAAATGATGATCTTGTTGAAATAGTGACGACCATTGTTTGGATTACATCGGGGCATCATGCTGCGGTGAATTTTGGTCAGTATACTTACGCTGGATATTTTCCTAATAGACCGGCCATTGCACGAAACAACATGCCTACAGAAGACCCTTCGGACAGCGAATGGGAACTTTTCTTTGAGAAACCGGAAGTGACATTGTTGAAGTGTTTCCCTTCGCAAATTCAAGCTATGACGGTGATGACCGTGTTGGATATTTTGTCAAGTCATTCGCCGGATGAGGAATATCTTGGAGAAACGATTGAGCCGGCTTGGCAAGAGGAACCGATGATTAAAGCTGCTTTTGAAAAGTTCAAAGGGAGGTTGATGGAGCTTGAAGGTATAATAGATGAGAGGAATGCTAATATGAAGTTCAGGAATAGAAATGGTGCTGGAATTTTGCCTTATGAGCTTTTGAAGCCAACATCAGAGCCTGGTGTAACAGGAAAAGGTGTTCCATATAGTGTCTCTATTTGA
Protein sequence

>Msa0604130

MLMQQISLKPNCLILNKPCLHGIGSNQTCFHVGSSRPLFINQKKQRRLFRRNECSKIKAVAVSDEELIEQQSVKVTATVTVQPTVGGLFSEMAIERGLDDITDLLGKSILLEFVSSELDPETKLEKEGIKGYVHQTHRSVEEIKYEAEFEVPGSFGDIGAVLVENEHRREMFIKQIVLDGFLTGPVNFSCESWVHSKHDNPDDKRVIFSNKSYLPSETPEGLIRLREEELKTLRGNGQGERKKFDRIYDYDVYNDLGDPDSDPELKRPVLGGKEHPYPRRCRTGRPRCDTDPLSEKRSNNVYVPRDESFSELKQLSFSANTLQSAFHALLPVVKTAVVDKNLGFPLFSAIDDLFNEGFNLPPQAEKGFLASVLPRLVRLVNEARNDILRFETPATMDKDRFFWFRDEEFGRQTIAGLNPCCIQLVTEWPLKSKLDPKIYGPAESAITTEMIEQQIRGHATVEEAIKQKKLYILDYYDFFLPLVEEVRKLEGTTLYGSRTLFFLNHDSTLRPLAIELARPPIGGKPEWRQVFTPTWHSTGVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPIYKLLLPHFRYTMEINALAREALINADGIIESSFTPKQLSLLVSSIAYDKHWQFDLQALPNDLIHRGLAEKDPNAPHGLKLTIEDYPYANDGLILWDTIKSWVTDYVNHYYNNESRTVESDKELQAWWYEIRNVGHGDKKDEPWWPNLKTNDDLVEIVTTIVWITSGHHAAVNFGQYTYAGYFPNRPAIARNNMPTEDPSDSEWELFFEKPEVTLLKCFPSQIQAMTVMTVLDILSSHSPDEEYLGETIEPAWQEEPMIKAAFEKFKGRLMELEGIIDERNANMKFRNRNGAGILPYELLKPTSEPGVTGKGVPYSVSI*