AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0636750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0636750 MtrunA17_Chr4g0033171 97.701 696 16 0 120 815 30 725 0.0 1418
Msa0636750 MtrunA17_Chr3g0118651 62.885 811 293 6 10 815 96 903 0.0 1105
Msa0636750 MtrunA17_Chr3g0118641 62.639 811 295 7 10 815 95 902 0.0 1078
Msa0636750 MtrunA17_Chr3g0118621 63.203 818 293 7 3 815 51 865 0.0 1053
Msa0636750 MtrunA17_Chr8g0344201 48.965 821 403 10 5 814 111 926 0.0 816
Msa0636750 MtrunA17_Chr8g0377101 48.242 825 409 10 3 815 98 916 0.0 813
Msa0636750 MtrunA17_Chr1g0205611 44.245 834 432 17 7 815 31 856 0.0 691
Msa0636750 MtrunA17_Chr8g0342881 44.282 822 435 15 7 815 45 856 0.0 676
Msa0636750 MtrunA17_Chr8g0344211 44.214 821 437 13 7 815 57 868 0.0 672
Msa0636750 MtrunA17_Chr8g0343011 44.135 827 424 15 7 815 59 865 0.0 672
Msa0636750 MtrunA17_Chr2g0329901 43.773 827 437 15 3 815 51 863 0.0 664
Msa0636750 MtrunA17_Chr8g0343021 43.811 824 434 14 7 815 55 864 0.0 664
Msa0636750 MtrunA17_Chr8g0342921 43.720 828 431 15 7 815 58 869 0.0 664
Msa0636750 MtrunA17_Chr2g0329911 42.944 822 446 13 7 815 50 861 0.0 659
Msa0636750 MtrunA17_Chr1g0191921 44.178 833 426 15 7 815 41 858 0.0 658
Msa0636750 MtrunA17_Chr8g0342971 44.228 823 434 16 8 815 58 870 0.0 658
Msa0636750 MtrunA17_Chr5g0406871 43.636 825 435 16 7 815 57 867 0.0 656
Msa0636750 MtrunA17_Chr8g0343031 43.256 823 438 14 8 815 57 865 0.0 654
Msa0636750 MtrunA17_Chr8g0342891 42.271 828 443 15 7 815 50 861 0.0 647
Msa0636750 MtrunA17_Chr4g0047281 43.033 811 419 14 17 814 114 894 0.0 647
Msa0636750 MtrunA17_Chr8g0342931 45.170 766 390 14 64 815 1 750 0.0 643
Msa0636750 MtrunA17_Chr8g0342951 43.727 821 441 13 7 815 57 868 0.0 638
Msa0636750 MtrunA17_Chr7g0272791 42.099 829 453 16 7 815 46 867 0.0 636
Msa0636750 MtrunA17_Chr8g0342901 42.663 811 421 15 11 815 56 828 0.0 632
Msa0636750 MtrunA17_Chr3g0120071 40.964 830 449 19 7 815 49 858 0.0 603
Msa0636750 MtrunA17_Chr8g0342981 41.585 820 429 16 15 815 35 823 0.0 591
Msa0636750 MtrunA17_Chr8g0343001 43.158 760 377 13 61 815 98 807 0.0 580
Msa0636750 MtrunA17_Chr8g0342991 42.500 760 382 13 61 815 98 807 0.0 575
Msa0636750 MtrunA17_Chr8g0338451 37.272 821 469 18 7 798 47 850 5.82e-176 529
Msa0636750 MtrunA17_Chr8g0344241 47.118 399 204 5 420 815 67 461 9.99e-118 364
Msa0636750 MtrunA17_Chr6g0471951 36.275 510 271 10 272 770 8 474 9.23e-104 328
Msa0636750 MtrunA17_Chr4g0033181 96.667 120 4 0 1 120 92 211 1.56e-74 243
Msa0636750 MtrunA17_Chr7g0218231 68.908 119 37 0 464 582 14 132 1.45e-54 184
Msa0636750 MtrunA17_Chr6g0468081 67.416 89 29 0 494 582 1 89 1.35e-35 130
Msa0636750 MtrunA17_Chr4g0047271 47.253 91 47 1 725 814 1 91 4.69e-18 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0636750 AT3G45140.1 58.037 815 327 7 5 815 93 896 0.0 997
Msa0636750 AT3G45140.2 59.605 760 297 6 60 815 1 754 0.0 958
Msa0636750 AT1G72520.1 49.390 820 397 11 7 815 114 926 0.0 827
Msa0636750 AT1G17420.1 49.697 825 390 11 5 815 106 919 0.0 820
Msa0636750 AT1G67560.1 46.981 828 412 13 4 815 101 917 0.0 779
Msa0636750 AT1G55020.1 45.301 830 420 16 7 815 43 859 0.0 677
Msa0636750 AT3G22400.1 44.696 839 425 17 7 815 57 886 0.0 676

Find 243 sgRNAs with CRISPR-Local

Find 563 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTTGACCCTAAAATTTA+TGG 0.171306 4_3:+27687245 Msa0636750:CDS
CATACCATCTCTAATATATT+TGG 0.178467 4_3:-27689026 None:intergenic
CTCTTTCTGCAAGAGTTAAA+AGG 0.191733 4_3:+27679701 Msa0636750:five_prime_UTR
CAAATGATGGTCTTATTCTT+TGG 0.204203 4_3:+27688246 Msa0636750:CDS
ACAACCTCCTTTGTTTCTTT+TGG 0.222665 4_3:-27679880 None:intergenic
CATCATGCTGCGGTGAATTT+TGG 0.226534 4_3:+27688482 Msa0636750:CDS
GGATAATGATGAAACCTTAT+TGG 0.262122 4_3:-27683332 None:intergenic
ATAAAGCAAATTGTTCTTGA+TGG 0.271031 4_3:+27683223 Msa0636750:CDS
CATTTCATTCCATTATTTCA+TGG 0.272738 4_3:-27689328 None:intergenic
CTTGAAGGCACAACATTATA+TGG 0.278755 4_3:+27687558 Msa0636750:CDS
CGTGCAATGGCCGGTCTATT+AGG 0.281859 4_3:-27688530 None:intergenic
TTTGAAGTACCAGGAAGTTT+TGG 0.287906 4_3:+27683151 Msa0636750:CDS
TTTAGGCCATGTGGGGCATT+TGG 0.297732 4_3:-27688197 None:intergenic
TGGTTTAGGGATGAAGAATT+TGG 0.299482 4_3:+27687029 Msa0636750:CDS
GTAAAGACTTGCCTCCATTC+TGG 0.301347 4_3:-27687666 None:intergenic
AGAAACAAAGGAGGTTGTTT+AGG 0.305076 4_3:+27679885 Msa0636750:five_prime_UTR
AGGGAGAGAAGTTATGGTTA+TGG 0.307083 4_3:-27679665 None:intergenic
CATTCTGGCTTTCCGCCAAT+TGG 0.310117 4_3:-27687651 None:intergenic
CTTGGCACTCAACTGGTGTT+TGG 0.311025 4_3:+27687694 Msa0636750:CDS
TCTATTCCTGAACTTCATAT+TGG 0.311612 4_3:-27688825 None:intergenic
CTTAACCTTATCAATCCTTC+TGG 0.318156 4_3:-27686132 None:intergenic
TAACTCATTCCATGAAATAA+TGG 0.321420 4_3:+27689319 Msa0636750:three_prime_UTR
GTTCTACAACGCCTAGGATA+TGG 0.322916 4_3:-27686303 None:intergenic
AAATGATGGTCTTATTCTTT+GGG 0.323159 4_3:+27688247 Msa0636750:CDS
ACTCAACTGGTGTTTGGCTT+TGG 0.325509 4_3:+27687700 Msa0636750:CDS
TATAATGTTAAATAAAGTTT+TGG 0.327389 4_3:+27688996 Msa0636750:three_prime_UTR
AAGTTGGATTGAATATAATT+TGG 0.328267 4_3:-27689050 None:intergenic
TACCAAGAGGGAGAGTTGTT+TGG 0.336952 4_3:-27688087 None:intergenic
GGGAGAGAAGTTATGGTTAT+GGG 0.342656 4_3:-27679664 None:intergenic
ACATCAGAGCCTGGTGTAAC+AGG 0.346010 4_3:+27688887 Msa0636750:CDS
CAACTGGTGTTTGGCTTTGG+AGG 0.346039 4_3:+27687703 Msa0636750:CDS
TTTGGGATACTATCAAATCT+TGG 0.346372 4_3:+27688264 Msa0636750:CDS
GAACTTAAACGACCTGTTCT+TGG 0.346682 4_3:+27686267 Msa0636750:CDS
TTCATTGAAAAGGTCATCTA+TGG 0.347003 4_3:-27686636 None:intergenic
GTCTCATATGTCGACTAAAA+AGG 0.348447 4_3:+27689174 Msa0636750:three_prime_UTR
TTGTTCAAGATGAGACAATT+TGG 0.358818 4_3:-27679785 None:intergenic
GAGAAGAGGGAGAGAAGTTA+TGG 0.360913 4_3:-27679671 None:intergenic
ACCAAGAGGGAGAGTTGTTT+GGG 0.361033 4_3:-27688086 None:intergenic
CATTTCAACAATGTCACTTC+CGG 0.369787 4_3:-27688611 None:intergenic
CACTCCCTAGAGATGTAATC+AGG 0.370761 4_3:-27689255 None:intergenic
TTAAGTTCGGGATCGCTGTC+TGG 0.374623 4_3:-27686252 None:intergenic
AAATAGTGACGACCATTGTT+TGG 0.375344 4_3:+27688447 Msa0636750:CDS
CTGTTTGTTGCTATAATGTA+AGG 0.375603 4_3:-27687936 None:intergenic
CCTCTATGAATGAGGTCATT+TGG 0.378176 4_3:-27688158 None:intergenic
ATCCAACATGAAAACATGTT+TGG 0.381038 4_3:-27679835 None:intergenic
TTGTGGAAAATGAGCATAGA+AGG 0.384517 4_3:+27683191 Msa0636750:CDS
ACCATTGTTTGGATTACATC+GGG 0.389981 4_3:+27688458 Msa0636750:CDS
TGGCAGAGGACAGATTCTTT+TGG 0.392055 4_3:+27687009 Msa0636750:intron
GGAATGCCAATATGAAGTTC+AGG 0.393968 4_3:+27688819 Msa0636750:CDS
TATCCTAGGCGTTGTAGAAC+TGG 0.394768 4_3:+27686306 Msa0636750:CDS
ATAGTGTAATGAAGGCTAAA+TGG 0.398580 4_3:-27689279 None:intergenic
TCTCAAATAGAGACACTATA+TGG 0.403294 4_3:-27688920 None:intergenic
AAGAACAGGTCGTTTAAGTT+CGG 0.403315 4_3:-27686265 None:intergenic
CCAATATCTCCAAAACTTCC+TGG 0.404847 4_3:-27683160 None:intergenic
TTGGGATACTATCAAATCTT+GGG 0.406679 4_3:+27688265 Msa0636750:CDS
ACACCTACTTGGCACTCAAC+TGG 0.407754 4_3:+27687687 Msa0636750:CDS
GTTCTTGATGGCTTTCTCAC+TGG 0.412239 4_3:+27683235 Msa0636750:CDS
ATCATCAGGGTTGTCATGCT+TGG 0.413714 4_3:-27683293 None:intergenic
CTGTGTTGCCAAGGTTGGTC+AGG 0.418531 4_3:+27686702 Msa0636750:CDS
TGATGACATAACCGATTTGT+TGG 0.420284 4_3:+27680051 Msa0636750:CDS
GTTGGGTAAATCAATTCTCT+TGG 0.421329 4_3:+27680069 Msa0636750:CDS
AGAATATCACTACTGAGGTC+TGG 0.422372 4_3:+27689425 Msa0636750:three_prime_UTR
GGAAGACCTCGTTGCGATAC+AGG 0.429976 4_3:+27686327 Msa0636750:CDS
ATAAGACCATCATTTGCATA+AGG 0.432398 4_3:-27688239 None:intergenic
AAAATGACCCTCTTATCATC+AGG 0.437774 4_3:-27683307 None:intergenic
TAATCCTTGTTGCATCCAAT+TGG 0.438384 4_3:+27687073 Msa0636750:CDS
GAATATCACTACTGAGGTCT+GGG 0.441179 4_3:+27689426 Msa0636750:three_prime_UTR
CCTTACTCTTGAGTCGCCCT+TGG 0.444639 4_3:-27689081 None:intergenic
AAGCCATGTCTCCATGGTAT+TGG 0.449477 4_3:+27679806 Msa0636750:five_prime_UTR
TGTTCTTTGCCACCAAGAAC+AGG 0.450316 4_3:-27686279 None:intergenic
GAGTTAGCTCGGCCGCCAAT+TGG 0.451009 4_3:+27687636 Msa0636750:CDS
GGCAAGTCTTTACACCTACT+TGG 0.451346 4_3:+27687676 Msa0636750:CDS
GATGACATAACCGATTTGTT+GGG 0.451366 4_3:+27680052 Msa0636750:CDS
AGAACAGGTCGTTTAAGTTC+GGG 0.451858 4_3:-27686264 None:intergenic
AAAGAGAAGTTATGAGAAGA+GGG 0.451983 4_3:-27679684 None:intergenic
GCTGTAGTGGACAAGAATCT+TGG 0.452160 4_3:+27686596 Msa0636750:CDS
AAAGTTCAAAGGGAGGTTGA+TGG 0.452373 4_3:+27688772 Msa0636750:CDS
TCTTTCTGCAAGAGTTAAAA+GGG 0.455179 4_3:+27679702 Msa0636750:five_prime_UTR
ACCAGTGACTAACAAGTTGA+TGG 0.456313 4_3:-27687764 None:intergenic
CATGTCCTTGCTCATGACTC+TGG 0.457266 4_3:+27687738 Msa0636750:CDS
GTTGGCTTCAAAAGCTCATA+AGG 0.458492 4_3:-27688866 None:intergenic
AGTTAAATCCTTCATTGAAA+AGG 0.459003 4_3:-27686646 None:intergenic
TTCAGCAAATACCTTACAAT+CGG 0.459678 4_3:+27686541 Msa0636750:CDS
AGTAGTATACCGTGACCAAT+TGG 0.462083 4_3:-27687088 None:intergenic
AAGCATGGTGGTATGAGATT+AGG 0.463349 4_3:+27688354 Msa0636750:CDS
AATTGATTTACCCAACAAAT+CGG 0.464268 4_3:-27680062 None:intergenic
GTGGTTATTGCTGATTCAGC+AGG 0.464570 4_3:-27687269 None:intergenic
GTCAAGTCATTCGCCGGATG+AGG 0.467476 4_3:+27688685 Msa0636750:CDS
TCTGGCTTTCCGCCAATTGG+CGG 0.468670 4_3:-27687648 None:intergenic
TCGCCGGATGAGGAATATCT+TGG 0.470343 4_3:+27688695 Msa0636750:CDS
GAAAGAGAAGTTATGAGAAG+AGG 0.473228 4_3:-27679685 None:intergenic
ATGAAGTTCAGGAATAGAAA+TGG 0.474519 4_3:+27688830 Msa0636750:CDS
ATGAGCAAGGACATGAGCTT+TGG 0.474874 4_3:-27687730 None:intergenic
AACAAAGGAGGTTGTTTAGG+AGG 0.475654 4_3:+27679888 Msa0636750:five_prime_UTR
GGAAGTAATAGTTTGTAGAT+TGG 0.475694 4_3:-27687978 None:intergenic
AAATTGCCAATGCTTATCAT+AGG 0.480247 4_3:-27688120 None:intergenic
TCTCCAAGATATTCCTCATC+CGG 0.481001 4_3:-27688698 None:intergenic
TGCGTCTGTGTTGCCAAGGT+TGG 0.481745 4_3:+27686697 Msa0636750:CDS
GTTACACCAGGCTCTGATGT+TGG 0.481878 4_3:-27688884 None:intergenic
GAGCCTGGTGTAACAGGAAA+AGG 0.483878 4_3:+27688893 Msa0636750:CDS
GAGAAACGATTGAGCCGGCT+TGG 0.485512 4_3:+27688717 Msa0636750:CDS
CCGGCCCTGATTACATCTCT+AGG 0.486296 4_3:+27689250 Msa0636750:three_prime_UTR
CTTCCACTGATCTATGCGTC+TGG 0.491600 4_3:-27683108 None:intergenic
GTTAGCTCCGAGCTAGATCC+CGG 0.491907 4_3:+27680097 Msa0636750:CDS
TGCGTGGAAAGCCGATTGTA+AGG 0.492059 4_3:-27686552 None:intergenic
TAAGACCATCATTTGCATAA+GGG 0.494543 4_3:-27688238 None:intergenic
ATGACAACCCTGATGATAAG+AGG 0.495085 4_3:+27683299 Msa0636750:CDS
GAGACAAAATTGGAGAAGGA+AGG 0.497417 4_3:+27683067 Msa0636750:intron
ATTGATAAGGTTAAGAGAAG+AGG 0.497584 4_3:+27686140 Msa0636750:CDS
TTGCCTCCGCAAGCTGAGAA+AGG 0.498666 4_3:+27686668 Msa0636750:CDS
TCAAAAGCAGCTTTAATCAT+CGG 0.502785 4_3:-27688749 None:intergenic
TCTGAGAAGGATTCGTCCCT+CGG 0.504722 4_3:-27686500 None:intergenic
ACGGTCTCAATGTGCTATCA+TGG 0.506109 4_3:-27687605 None:intergenic
CTGCTAGTCCTCTATGAATG+AGG 0.508752 4_3:-27688166 None:intergenic
TTCAGGAATAGAAATGGTGC+TGG 0.509228 4_3:+27688836 Msa0636750:CDS
AAGACCCTTCGGACAGCGAA+TGG 0.509994 4_3:+27688570 Msa0636750:CDS
ATCGGTTCCTCTTGCCAAGC+CGG 0.510599 4_3:-27688731 None:intergenic
TTGACTCATTGTTATAGTAG+TGG 0.511572 4_3:-27688304 None:intergenic
TTCTTGCGTCTGTGTTGCCA+AGG 0.514702 4_3:+27686693 Msa0636750:CDS
GAGAAAAGTCCTCCAACTGT+TGG 0.515763 4_3:-27680004 None:intergenic
ATGTTGTTTCGTGCAATGGC+CGG 0.516262 4_3:-27688539 None:intergenic
TTGAAGCCAACATCAGAGCC+TGG 0.522494 4_3:+27688878 Msa0636750:CDS
TTTGGAAGACAGACTATAGC+AGG 0.522688 4_3:+27687047 Msa0636750:CDS
ATCTTACTGTCCATTGTGGC+GGG 0.524956 4_3:-27686767 None:intergenic
ATCCAACTTGATTACATCCA+AGG 0.525333 4_3:+27689064 Msa0636750:three_prime_UTR
AGGCATGTTGTTTCGTGCAA+TGG 0.525554 4_3:-27688543 None:intergenic
GCAAAGAACATCCATATCCT+AGG 0.527336 4_3:+27686292 Msa0636750:CDS
AGACCCTTCGGACAGCGAAT+GGG 0.527739 4_3:+27688571 Msa0636750:CDS
TTGCTAGCATAGTGTAATGA+AGG 0.530666 4_3:-27689287 None:intergenic
TCCCAAACAACTCTCCCTCT+TGG 0.531245 4_3:+27688085 Msa0636750:CDS
TCAGAAATGGCTATAGAAAG+AGG 0.531378 4_3:+27680025 Msa0636750:exon
CTTAAACGACCTGTTCTTGG+TGG 0.533575 4_3:+27686270 Msa0636750:CDS
TTGACAAGCCTGACCAACCT+TGG 0.535049 4_3:-27686710 None:intergenic
ACCATCAACTTGTTAGTCAC+TGG 0.535909 4_3:+27687763 Msa0636750:CDS
AATCCTTCTGGTGTTTCAGA+TGG 0.536422 4_3:-27686120 None:intergenic
GCCCTTGGATGTAATCAAGT+TGG 0.536500 4_3:-27689066 None:intergenic
GCACAACATTATATGGATCA+AGG 0.536766 4_3:+27687565 Msa0636750:CDS
ACTGTTCAACCAACAGTTGG+AGG 0.537630 4_3:+27679995 Msa0636750:five_prime_UTR
GGGAGGTTGATGGAGCTTGA+AGG 0.538098 4_3:+27688782 Msa0636750:CDS
TCCATTGTGTATCTAAAATG+TGG 0.538918 4_3:-27687999 None:intergenic
TTAGCTCGGCCGCCAATTGG+CGG 0.540332 4_3:+27687639 Msa0636750:CDS
TCATCTATGGCTGAGAAAAG+AGG 0.540800 4_3:-27686623 None:intergenic
GATTACCCTTATGCAAATGA+TGG 0.542032 4_3:+27688233 Msa0636750:CDS
AAACACCAGAAGGATTGATA+AGG 0.546240 4_3:+27686127 Msa0636750:CDS
CTGTCCGAAGGGTCTTCTGT+AGG 0.547242 4_3:-27688563 None:intergenic
TATGAATGAGGTCATTTGGA+AGG 0.549816 4_3:-27688154 None:intergenic
GAGAAGTTATGGTTATGGGA+TGG 0.550391 4_3:-27679660 None:intergenic
CCAAGGGCGACTCAAGAGTA+AGG 0.550503 4_3:+27689081 Msa0636750:three_prime_UTR
GAGGAAGTCAGAAAACTTGA+AGG 0.554158 4_3:+27687543 Msa0636750:CDS
TTTGGTTACTTCCAATACCA+TGG 0.556225 4_3:-27679817 None:intergenic
CATCTATGGCTGAGAAAAGA+GGG 0.557786 4_3:-27686622 None:intergenic
AGAAATCCTTTCTCAGCTTG+CGG 0.559756 4_3:-27686674 None:intergenic
TTGGAGAAGGAAGGAATCAA+AGG 0.560037 4_3:+27683076 Msa0636750:CDS
CAATAGCCTATGATAAGCAT+TGG 0.560181 4_3:+27688114 Msa0636750:CDS
CTTCCAATACCATGGAGACA+TGG 0.561407 4_3:-27679809 None:intergenic
TCTTGGAGAAACGATTGAGC+CGG 0.561911 4_3:+27688712 Msa0636750:CDS
AGATATTGGTGCAGTTCTTG+TGG 0.562515 4_3:+27683174 Msa0636750:CDS
AAAAGAGACAAAATTGGAGA+AGG 0.563624 4_3:+27683063 Msa0636750:intron
CTGAAAACTTTACGAGGCAA+TGG 0.564230 4_3:+27686165 Msa0636750:CDS
GAAGCACTTATAAATGCAGA+TGG 0.564500 4_3:+27688041 Msa0636750:CDS
GAGTTGCTTTAATTCTGAGA+AGG 0.565436 4_3:-27686513 None:intergenic
CGTTGGCGATCGAGTTAGCT+CGG 0.566042 4_3:+27687625 Msa0636750:CDS
CGGCCCTGATTACATCTCTA+GGG 0.569101 4_3:+27689251 Msa0636750:three_prime_UTR
ATGAATGAGGTCATTTGGAA+GGG 0.573787 4_3:-27688153 None:intergenic
AGTTCCCATTCGCTGTCCGA+AGG 0.574184 4_3:-27688575 None:intergenic
CCAAATGACCTCATTCATAG+AGG 0.574379 4_3:+27688158 Msa0636750:CDS
GACCATTGTTTGGATTACAT+CGG 0.574726 4_3:+27688457 Msa0636750:CDS
GTCATTGCTTGAATTTGCGA+AGG 0.575194 4_3:-27688638 None:intergenic
TGACTTACCGGGATCTAGCT+CGG 0.577812 4_3:-27680104 None:intergenic
TTTCTGACTTCCTCGACCAA+CGG 0.578983 4_3:-27687534 None:intergenic
CAGAAATGGCTATAGAAAGA+GGG 0.580132 4_3:+27680026 Msa0636750:exon
CAATTGGCGGAAAGCCAGAA+TGG 0.580426 4_3:+27687652 Msa0636750:CDS
TTGTTGCTCAATCATTTCAG+TGG 0.580753 4_3:-27687288 None:intergenic
ACACCAGTTGAGTGCCAAGT+AGG 0.585215 4_3:-27687690 None:intergenic
TCCAACTTGATTACATCCAA+GGG 0.586397 4_3:+27689065 Msa0636750:three_prime_UTR
TTGAACAAGCCATGTCTCCA+TGG 0.586444 4_3:+27679800 Msa0636750:five_prime_UTR
GTTACTGTTCAACCAACAGT+TGG 0.586551 4_3:+27679992 Msa0636750:five_prime_UTR
GATTGAGCCGGCTTGGCAAG+AGG 0.589180 4_3:+27688724 Msa0636750:CDS
TCATTGCTTGAATTTGCGAA+GGG 0.589615 4_3:-27688637 None:intergenic
TATCTTACTGTCCATTGTGG+CGG 0.591570 4_3:-27686768 None:intergenic
GAACGTACATTGTTTACAGT+CGG 0.593956 4_3:-27679638 None:intergenic
CCTAGAGATGTAATCAGGGC+CGG 0.594907 4_3:-27689250 None:intergenic
GGTTGTGAAAACAGCTGTAG+TGG 0.595530 4_3:+27686583 Msa0636750:CDS
GTTGGTCAGGCTTGTCAATG+AGG 0.596030 4_3:+27686715 Msa0636750:CDS
GTTCCCATTCGCTGTCCGAA+GGG 0.597179 4_3:-27688574 None:intergenic
TTCGCAAATTCAAGCAATGA+CGG 0.598232 4_3:+27688640 Msa0636750:CDS
AATCCTTTCTCAGCTTGCGG+AGG 0.598368 4_3:-27686671 None:intergenic
TTTGGTCAGTATACTTACGC+TGG 0.598381 4_3:+27688500 Msa0636750:CDS
TGCTATAATGTAAGGCTCTG+TGG 0.599707 4_3:-27687928 None:intergenic
CATGCCTACAGAAGACCCTT+CGG 0.600883 4_3:+27688559 Msa0636750:CDS
TGGTATGAGATTAGGAATGT+TGG 0.601692 4_3:+27688362 Msa0636750:CDS
CCACTGATCTATGCGTCTGG+TGG 0.602891 4_3:-27683105 None:intergenic
TCTATTTGAGACACATGTTG+TGG 0.603437 4_3:+27688932 Msa0636750:exon
AAATGACCCTCTTATCATCA+GGG 0.603935 4_3:-27683306 None:intergenic
TTGAAGGTATAATAGATGAG+AGG 0.604595 4_3:+27688798 Msa0636750:CDS
AAATATCTTACTGTCCATTG+TGG 0.606843 4_3:-27686771 None:intergenic
CGAGCTAACTCGATCGCCAA+CGG 0.607861 4_3:-27687624 None:intergenic
TCAGGCTTGTCAATGAGGCT+AGG 0.608501 4_3:+27686720 Msa0636750:CDS
TGTGGAAAATGAGCATAGAA+GGG 0.608699 4_3:+27683192 Msa0636750:CDS
TCACAACCGGTAAAAGTGCG+TGG 0.609810 4_3:-27686568 None:intergenic
AGGACATGCTACAGTTGAAG+AGG 0.610205 4_3:+27687316 Msa0636750:CDS
GGCTATTGAACTTACCAAGA+GGG 0.610590 4_3:-27688099 None:intergenic
GAAGCTGAATTTGAAGTACC+AGG 0.611074 4_3:+27683142 Msa0636750:CDS
CTTCCAGTTCTACAACGCCT+AGG 0.613399 4_3:-27686309 None:intergenic
TTGTTGCATCCAATTGGTCA+CGG 0.613442 4_3:+27687079 Msa0636750:CDS
TGATAGCACATTGAGACCGT+TGG 0.613528 4_3:+27687608 Msa0636750:CDS
CGGATAAAGAATTACAAGCA+TGG 0.616013 4_3:+27688339 Msa0636750:CDS
TTGTGGCGGGAGTCTCGAAA+CGG 0.619459 4_3:-27686754 None:intergenic
ACTTTACGAGGCAATGGACA+AGG 0.619463 4_3:+27686171 Msa0636750:CDS
ATGATTGAGCAACAAATCAG+AGG 0.621173 4_3:+27687296 Msa0636750:CDS
TGACAACCCTGATGATAAGA+GGG 0.622995 4_3:+27683300 Msa0636750:CDS
AAAGATCCAAATGCCCCACA+TGG 0.624536 4_3:+27688191 Msa0636750:CDS
TTTCGAGACTCCCGCCACAA+TGG 0.628813 4_3:+27686757 Msa0636750:CDS
TCATAAACCAAAAGAAACAA+AGG 0.629237 4_3:+27679873 Msa0636750:five_prime_UTR
CCCCGATGTAATCCAAACAA+TGG 0.629499 4_3:-27688459 None:intergenic
ACAACCAAATATATTAGAGA+TGG 0.630750 4_3:+27689022 Msa0636750:three_prime_UTR
TGAGTCAAGAACTGTTGAGT+CGG 0.633371 4_3:+27688319 Msa0636750:CDS
TACATCGGGGCATCATGCTG+CGG 0.637437 4_3:+27688472 Msa0636750:CDS
GAGATTAGGAATGTTGGTCA+CGG 0.638549 4_3:+27688368 Msa0636750:CDS
TACGATGTGTATAATGACCT+CGG 0.643812 4_3:+27686225 Msa0636750:CDS
AATATCACTACTGAGGTCTG+GGG 0.644415 4_3:+27689427 Msa0636750:three_prime_UTR
GTAACAATGTCTATGTTCCG+AGG 0.644422 4_3:+27686483 Msa0636750:CDS
CCACCAGACGCATAGATCAG+TGG 0.649521 4_3:+27683105 Msa0636750:CDS
ACTCCCTAGAGATGTAATCA+GGG 0.651037 4_3:-27689254 None:intergenic
GTGACCAATTGGATGCAACA+AGG 0.655202 4_3:-27687077 None:intergenic
CCATTGTTTGGATTACATCG+GGG 0.657108 4_3:+27688459 Msa0636750:CDS
AAGAAAGAATATCACTACTG+AGG 0.657528 4_3:+27689420 Msa0636750:three_prime_UTR
TAACAATGTCTATGTTCCGA+GGG 0.658588 4_3:+27686484 Msa0636750:CDS
TTACCATCTGAAACACCAGA+AGG 0.662031 4_3:+27686117 Msa0636750:CDS
TTGGCGGAAAGCCAGAATGG+AGG 0.667120 4_3:+27687655 Msa0636750:CDS
ATATCACTACTGAGGTCTGG+GGG 0.673931 4_3:+27689428 Msa0636750:three_prime_UTR
GGTAGCCAGAGTCATGAGCA+AGG 0.680144 4_3:-27687743 None:intergenic
TAAACCAAAAGAAACAAAGG+AGG 0.689233 4_3:+27679876 Msa0636750:five_prime_UTR
GTGACAAGAAAGACGAACCA+TGG 0.691218 4_3:+27688390 Msa0636750:CDS
AGGCTATTGAACTTACCAAG+AGG 0.696886 4_3:-27688100 None:intergenic
GGCCTACCTGTATCGCAACG+AGG 0.706133 4_3:-27686333 None:intergenic
ACTTGACAAAATATCCAACA+CGG 0.724220 4_3:-27688669 None:intergenic
ATAAAGAATTACAAGCATGG+TGG 0.729305 4_3:+27688342 Msa0636750:CDS
ACAAGAAAGACGAACCATGG+TGG 0.729803 4_3:+27688393 Msa0636750:CDS
GAGGAACTGAAAACTTTACG+AGG 0.731350 4_3:+27686159 Msa0636750:CDS
AATGACGGTGATGACCGTGT+TGG 0.742214 4_3:+27688655 Msa0636750:CDS
TGTTGGTTGAACAGTAACTG+TGG 0.746011 4_3:-27679987 None:intergenic
GATCGCTGTCTGGATCACCG+AGG 0.820366 4_3:-27686242 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAATAATTTAAATAAA+GGG - chr4_3:27681140-27681159 None:intergenic 0.0%
!! ATATATATATATATATATTA+TGG - chr4_3:27683363-27683382 None:intergenic 0.0%
!! ATATTATATATTAAATTTAA+AGG + chr4_3:27683723-27683742 Msa0636750:intron 0.0%
!!! ATTTTTTTTTTTTTTTTTTA+AGG + chr4_3:27684895-27684914 Msa0636750:intron 0.0%
!! AAATAAAAAAAATAAAAAAA+AGG - chr4_3:27687125-27687144 None:intergenic 0.0%
!!! CATGTTTTTAAAAAAAATTA+GGG + chr4_3:27680581-27680600 Msa0636750:intron 10.0%
!!! TAATTTTATTTAATTACTAG+AGG + chr4_3:27680813-27680832 Msa0636750:intron 10.0%
!! TAAATTATTAATTAGAAAGA+TGG - chr4_3:27681052-27681071 None:intergenic 10.0%
!! TAATTAAATCTCATTAAAAT+AGG + chr4_3:27681332-27681351 Msa0636750:intron 10.0%
!!! AAAAAATGATCAAATATTTT+TGG - chr4_3:27681424-27681443 None:intergenic 10.0%
!!! AATATTTGATCATTTTTTTA+AGG + chr4_3:27681426-27681445 Msa0636750:intron 10.0%
!!! ATCAATTTTAATATATACAA+TGG - chr4_3:27681493-27681512 None:intergenic 10.0%
!! ATATAGAAAAAAATTGTTTA+AGG + chr4_3:27681959-27681978 Msa0636750:intron 10.0%
!! TATAGAAAAAAATTGTTTAA+GGG + chr4_3:27681960-27681979 Msa0636750:intron 10.0%
!! TTTGTTAATTATTTAATTGT+TGG - chr4_3:27682387-27682406 None:intergenic 10.0%
!!! CAATTAATTTTATTTTTGTT+TGG - chr4_3:27682979-27682998 None:intergenic 10.0%
!! TAACTATTATAAATTGAATT+CGG - chr4_3:27683535-27683554 None:intergenic 10.0%
!! CTAAAAAAATTATTTGTATT+TGG - chr4_3:27683678-27683697 None:intergenic 10.0%
!!! TTTGTCTTATTTTTATATTT+TGG - chr4_3:27683947-27683966 None:intergenic 10.0%
!!! CTCAATATAAATAAAAATTT+TGG + chr4_3:27684093-27684112 Msa0636750:intron 10.0%
!!! CAATATAAATAAAAATTTTG+GGG + chr4_3:27684095-27684114 Msa0636750:intron 10.0%
!! AAAAAAAAAAAAAATTTGAC+AGG - chr4_3:27684890-27684909 None:intergenic 10.0%
!!! TAATTGTATAATAATTTTAG+GGG - chr4_3:27685330-27685349 None:intergenic 10.0%
!!! GATAATTGTATAATAATTTT+AGG - chr4_3:27685332-27685351 None:intergenic 10.0%
!!! TAAAATATACTTTTACAAAT+TGG + chr4_3:27685360-27685379 Msa0636750:intron 10.0%
!!! ATTAATTTTACTAAGAAATA+GGG - chr4_3:27685935-27685954 None:intergenic 10.0%
!!! TATTAATTTTACTAAGAAAT+AGG - chr4_3:27685936-27685955 None:intergenic 10.0%
!!! TAATATTTTCTTTTTAACAA+AGG + chr4_3:27686827-27686846 Msa0636750:intron 10.0%
!!! TATAATGTTAAATAAAGTTT+TGG + chr4_3:27688996-27689015 Msa0636750:three_prime_UTR 10.0%
!!! AAAATATTTTTTTTTATTGG+GGG - chr4_3:27689130-27689149 None:intergenic 10.0%
!!! ATTAGATTTTATAAACAAAA+AGG + chr4_3:27689152-27689171 Msa0636750:three_prime_UTR 10.0%
!!! TAAAACAAATTTTAATATAC+CGG - chr4_3:27689201-27689220 None:intergenic 10.0%
!!! TGATTGATAATAAAAAAAAA+TGG - chr4_3:27689386-27689405 None:intergenic 10.0%
!! TTAAATAATCCGTAAAAAAT+CGG - chr4_3:27680283-27680302 None:intergenic 15.0%
!!! CCTAATTTTTTTTAAAAACA+TGG - chr4_3:27680583-27680602 None:intergenic 15.0%
!!! CCATGTTTTTAAAAAAAATT+AGG + chr4_3:27680580-27680599 Msa0636750:intron 15.0%
!!! TATAGAAAAACTTTTTTTTC+AGG - chr4_3:27680974-27680993 None:intergenic 15.0%
!! TATGTATCATATTTATATAC+AGG - chr4_3:27681083-27681102 None:intergenic 15.0%
!! GTTTAAATAAAGGATAAAAA+TGG - chr4_3:27681266-27681285 None:intergenic 15.0%
!!! AATATTTTTGGCAAATAATA+AGG - chr4_3:27681412-27681431 None:intergenic 15.0%
!! TTCATTAGCAATATTATAAA+AGG + chr4_3:27681590-27681609 Msa0636750:intron 15.0%
!! CAATATTATCTATACTATAT+GGG - chr4_3:27682033-27682052 None:intergenic 15.0%
!! ACAATATTATCTATACTATA+TGG - chr4_3:27682034-27682053 None:intergenic 15.0%
!! ACAAAATAAAAGATTATGAA+AGG - chr4_3:27682736-27682755 None:intergenic 15.0%
!!! TTTTATTTTGTGTTTTGATT+TGG + chr4_3:27682745-27682764 Msa0636750:intron 15.0%
!!! TTAATTGACCTTTTTTTTTT+AGG + chr4_3:27682992-27683011 Msa0636750:intron 15.0%
!!! TAATTGACCTTTTTTTTTTA+GGG + chr4_3:27682993-27683012 Msa0636750:intron 15.0%
!! ATTAATTCCCTAAAAAAAAA+AGG - chr4_3:27683003-27683022 None:intergenic 15.0%
!! TGTTTAATCTCTATAATATT+AGG + chr4_3:27683753-27683772 Msa0636750:intron 15.0%
!! CAAAAATAGCATAAATTAAA+AGG - chr4_3:27684001-27684020 None:intergenic 15.0%
!! GTAGCTAAAAATATATTATT+GGG + chr4_3:27684041-27684060 Msa0636750:intron 15.0%
!! TAGCTAAAAATATATTATTG+GGG + chr4_3:27684042-27684061 Msa0636750:intron 15.0%
!! TTTGATCAAATTATTCAAAT+TGG + chr4_3:27684163-27684182 Msa0636750:intron 15.0%
!!! TTGTGACATTTAATTTATTT+TGG + chr4_3:27684535-27684554 Msa0636750:intron 15.0%
!!! TGTGACATTTAATTTATTTT+GGG + chr4_3:27684536-27684555 Msa0636750:intron 15.0%
!!! AAGTATTGTCATAAAATTAT+TGG + chr4_3:27685081-27685100 Msa0636750:intron 15.0%
!! AGTATTGTCATAAAATTATT+GGG + chr4_3:27685082-27685101 Msa0636750:intron 15.0%
!! ATTTATTCATTAACAAAATG+TGG + chr4_3:27685719-27685738 Msa0636750:intron 15.0%
!!! TTAATTTTACTAAGAAATAG+GGG - chr4_3:27685934-27685953 None:intergenic 15.0%
!!! CATTTAACATGTAAATTTTT+TGG - chr4_3:27685997-27686016 None:intergenic 15.0%
!! TTGGAATTAATAATTTAACT+CGG + chr4_3:27686427-27686446 Msa0636750:intron 15.0%
!! TGTATATGAAATTAATGATA+GGG - chr4_3:27686860-27686879 None:intergenic 15.0%
!! TTGTATATGAAATTAATGAT+AGG - chr4_3:27686861-27686880 None:intergenic 15.0%
!! AAATAAAAAAAAGGTAACAT+AGG - chr4_3:27687116-27687135 None:intergenic 15.0%
!! AGTATACTTTCAAATAAAAT+TGG - chr4_3:27687157-27687176 None:intergenic 15.0%
!!! ATGATTTTATTTTTTTGACT+TGG - chr4_3:27687853-27687872 None:intergenic 15.0%
!!! AAAACAAATTTTAATATACC+GGG - chr4_3:27689200-27689219 None:intergenic 15.0%
!! CACCTAAAAATAAAAATTAT+TGG + chr4_3:27689226-27689245 Msa0636750:three_prime_UTR 15.0%
!!! GTCCAATAATTTTTATTTTT+AGG - chr4_3:27689231-27689250 None:intergenic 15.0%
!! AAAAATAAAAATTATTGGAC+CGG + chr4_3:27689231-27689250 Msa0636750:three_prime_UTR 15.0%
!!! TTTTTTTTCCTAAAGCAATA+AGG + chr4_3:27680252-27680271 Msa0636750:intron 20.0%
!! TTGAAGAAAACTACATTTAA+GGG - chr4_3:27680692-27680711 None:intergenic 20.0%
!! TTTGAAGAAAACTACATTTA+AGG - chr4_3:27680693-27680712 None:intergenic 20.0%
!! TATAGAAAGAGATATCAATT+TGG + chr4_3:27680890-27680909 Msa0636750:intron 20.0%
!! ATCATATTTATATACAGGTA+TGG - chr4_3:27681078-27681097 None:intergenic 20.0%
!! AATATTATCTAATTGTTGTG+TGG - chr4_3:27681363-27681382 None:intergenic 20.0%
!! TAACGCGTATAAATTATTAA+CGG + chr4_3:27681764-27681783 Msa0636750:intron 20.0%
!!! AAGATAAACATAGTCTTTTT+GGG - chr4_3:27681869-27681888 None:intergenic 20.0%
!!! AAAGATAAACATAGTCTTTT+TGG - chr4_3:27681870-27681889 None:intergenic 20.0%
!! ATTACTAACATTATCAACAT+TGG + chr4_3:27682185-27682204 Msa0636750:intron 20.0%
!! ATATTCATAACTATCAACAT+TGG + chr4_3:27682307-27682326 Msa0636750:intron 20.0%
!! CAAAATAAGTTCAATTCAAA+CGG + chr4_3:27682650-27682669 Msa0636750:intron 20.0%
!! AAAATAAGTTCAATTCAAAC+GGG + chr4_3:27682651-27682670 Msa0636750:intron 20.0%
!! TGTTAGATTATAATTATTCG+TGG + chr4_3:27682793-27682812 Msa0636750:intron 20.0%
!! TATATATATATTATGGAGCT+GGG - chr4_3:27683356-27683375 None:intergenic 20.0%
!! ATATATATATATTATGGAGC+TGG - chr4_3:27683357-27683376 None:intergenic 20.0%
!! AATTAATTAGTTATTTGCAG+CGG + chr4_3:27683624-27683643 Msa0636750:intron 20.0%
!! TGTGCAAATAAATTTATTTG+AGG + chr4_3:27684019-27684038 Msa0636750:intron 20.0%
!! GGTAGCTAAAAATATATTAT+TGG + chr4_3:27684040-27684059 Msa0636750:intron 20.0%
!! TTTATTTATATTGAGTCACT+AGG - chr4_3:27684088-27684107 None:intergenic 20.0%
!! TTAAGAGACTTAAAAAAGTA+GGG - chr4_3:27684393-27684412 None:intergenic 20.0%
!! ATTAAGAGACTTAAAAAAGT+AGG - chr4_3:27684394-27684413 None:intergenic 20.0%
!!! GTGACATTTAATTTATTTTG+GGG + chr4_3:27684537-27684556 Msa0636750:intron 20.0%
!!! TGAATCATTGGTTATTTTAT+GGG + chr4_3:27684648-27684667 Msa0636750:intron 20.0%
!!! GCAAATTTTCTAAAAAGAAA+TGG - chr4_3:27684712-27684731 None:intergenic 20.0%
!!! ATTTTATGACAATACTTTAG+AGG - chr4_3:27685078-27685097 None:intergenic 20.0%
!! GTATTGTCATAAAATTATTG+GGG + chr4_3:27685083-27685102 Msa0636750:intron 20.0%
!! ATGTCATGTACTTATTTAAT+TGG + chr4_3:27685835-27685854 Msa0636750:intron 20.0%
!!! TAATTTTACTAAGAAATAGG+GGG - chr4_3:27685933-27685952 None:intergenic 20.0%
!! GTATATGAAATTAATGATAG+GGG - chr4_3:27686859-27686878 None:intergenic 20.0%
!! TATTTGAATTTACTCATCAA+TGG + chr4_3:27686971-27686990 Msa0636750:intron 20.0%
!! ATTTGAATTTACTCATCAAT+GGG + chr4_3:27686972-27686991 Msa0636750:intron 20.0%
!!! AAGAGGTATGTTTTTATTTA+AGG + chr4_3:27687333-27687352 Msa0636750:intron 20.0%
!!! AGAGGTATGTTTTTATTTAA+GGG + chr4_3:27687334-27687353 Msa0636750:intron 20.0%
!! AGTTAGTACCATTAAATAAA+GGG - chr4_3:27687399-27687418 None:intergenic 20.0%
!! TAGTTAGTACCATTAAATAA+AGG - chr4_3:27687400-27687419 None:intergenic 20.0%
!! AAATGAAACAATTCAATTAC+AGG + chr4_3:27687461-27687480 Msa0636750:intron 20.0%
!! ACAAAAGTGAAAATCAATTA+AGG - chr4_3:27687887-27687906 None:intergenic 20.0%
!!! AATCTTCTATTGTTAGTTTT+AGG - chr4_3:27688217-27688236 None:intergenic 20.0%
!!! TCATCATTTGTTTTCAAATT+AGG - chr4_3:27688419-27688438 None:intergenic 20.0%
!! AAGTTGGATTGAATATAATT+TGG - chr4_3:27689053-27689072 None:intergenic 20.0%
!!! AATGATTAACCATTTTTTCA+TGG - chr4_3:27689359-27689378 None:intergenic 20.0%
!!! TTCTTTTGGTTTATGAACAA+AGG - chr4_3:27679869-27679888 None:intergenic 25.0%
! TCATAAACCAAAAGAAACAA+AGG + chr4_3:27679873-27679892 Msa0636750:five_prime_UTR 25.0%
!! AATTGATTTACCCAACAAAT+CGG - chr4_3:27680065-27680084 None:intergenic 25.0%
!!! TTAACTTTGGAATTTAGGTT+GGG + chr4_3:27680130-27680149 Msa0636750:intron 25.0%
!!! CATTTTAAGCTGTTTTTAAC+TGG - chr4_3:27680626-27680645 None:intergenic 25.0%
! CTATATATTCAGTGAATGTT+TGG - chr4_3:27680758-27680777 None:intergenic 25.0%
! ACATTCACTGAATATATAGT+TGG + chr4_3:27680759-27680778 Msa0636750:intron 25.0%
! AAATAAGCACAGTAGAAAAA+CGG - chr4_3:27680867-27680886 None:intergenic 25.0%
! AGTGTTATATAGTGTTCTTA+TGG + chr4_3:27680993-27681012 Msa0636750:intron 25.0%
! TGGTTAAATCTCACTAAAAT+AGG - chr4_3:27681032-27681051 None:intergenic 25.0%
!! AAATATGATACATAGCTTTG+TGG + chr4_3:27681089-27681108 Msa0636750:intron 25.0%
! TAATCAGCAATCTACATAAA+TGG + chr4_3:27681520-27681539 Msa0636750:intron 25.0%
! TAGGTAGTAGTAATATAAAG+AGG - chr4_3:27681695-27681714 None:intergenic 25.0%
! TTACTACTACCTAAAAAAAG+AGG + chr4_3:27681702-27681721 Msa0636750:intron 25.0%
! ATTATCTATACTATATGGGA+AGG - chr4_3:27682029-27682048 None:intergenic 25.0%
!! AACATTATCAACATTGGTTA+CGG + chr4_3:27682191-27682210 Msa0636750:intron 25.0%
!! TCATTTTACGTTCTAATAAG+AGG - chr4_3:27682236-27682255 None:intergenic 25.0%
!! ATAACTATCAACATTGGTTA+CGG + chr4_3:27682313-27682332 Msa0636750:intron 25.0%
!! TCATTTTACGTTCTAATAAG+AGG - chr4_3:27682236-27682255 None:intergenic 25.0%
! AAATAAGTTCAATTCAAACG+GGG + chr4_3:27682652-27682671 Msa0636750:intron 25.0%
!!! ACGTCAATTTTAGCATATAT+TGG - chr4_3:27682946-27682965 None:intergenic 25.0%
! GGGAAAAATACAAGTAATTA+AGG - chr4_3:27683029-27683048 None:intergenic 25.0%
!!! TTGTATTTTTCCCTTGTTTT+TGG + chr4_3:27683036-27683055 Msa0636750:intron 25.0%
!! TCTTTTTGAACCAAAAACAA+GGG - chr4_3:27683049-27683068 None:intergenic 25.0%
! ATAAAGCAAATTGTTCTTGA+TGG + chr4_3:27683223-27683242 Msa0636750:CDS 25.0%
!! TCAATTTTTCTTGTGAATCA+TGG + chr4_3:27683263-27683282 Msa0636750:CDS 25.0%
!! CAATTTTTCTTGTGAATCAT+GGG + chr4_3:27683264-27683283 Msa0636750:CDS 25.0%
!!! AAGCTAAGAAATTTTTTACG+AGG + chr4_3:27683649-27683668 Msa0636750:intron 25.0%
!!! AGCTAAGAAATTTTTTACGA+GGG + chr4_3:27683650-27683669 Msa0636750:intron 25.0%
! TAATTTGATCAAATAACCAG+AGG - chr4_3:27684156-27684175 None:intergenic 25.0%
!! TTCTTTATGAGCATTTTATC+TGG + chr4_3:27684484-27684503 Msa0636750:intron 25.0%
! TGTATGGCTATCAATTTATA+CGG - chr4_3:27684619-27684638 None:intergenic 25.0%
! TGATTCACAAAAAAACTGTA+TGG - chr4_3:27684635-27684654 None:intergenic 25.0%
!!! ACAGTTTTTTTGTGAATCAT+TGG + chr4_3:27684636-27684655 Msa0636750:intron 25.0%
!!! GTGAATCATTGGTTATTTTA+TGG + chr4_3:27684647-27684666 Msa0636750:intron 25.0%
!!! TTGGTTATTTTATGGGTTTT+TGG + chr4_3:27684655-27684674 Msa0636750:intron 25.0%
!!! TTTTTTTTTAAGGAAAGCCT+AGG + chr4_3:27684905-27684924 Msa0636750:intron 25.0%
! ACTAACAAAGTCTATATTCA+AGG + chr4_3:27685228-27685247 Msa0636750:intron 25.0%
! TTTACAAATTGGAAAACTTG+AGG + chr4_3:27685371-27685390 Msa0636750:intron 25.0%
! TGTTAATCTTTCAATTCTCT+AGG - chr4_3:27685447-27685466 None:intergenic 25.0%
! AAAAAAACTTAGAGTGTGTT+TGG + chr4_3:27685480-27685499 Msa0636750:intron 25.0%
! TGTAATGTAATGTAATGTTG+AGG + chr4_3:27685585-27685604 Msa0636750:intron 25.0%
! AATAAGTACATGACATTGAT+AGG - chr4_3:27685831-27685850 None:intergenic 25.0%
!!! CACGTACAATTTTAATTATG+AGG + chr4_3:27686027-27686046 Msa0636750:intron 25.0%
! TCGTTAAAAGAAAATTGTGT+TGG + chr4_3:27686408-27686427 Msa0636750:intron 25.0%
! AGTTAAATCCTTCATTGAAA+AGG - chr4_3:27686649-27686668 None:intergenic 25.0%
! AAACTTGACCCTAAAATTTA+TGG + chr4_3:27687245-27687264 Msa0636750:CDS 25.0%
!! TAGCATTTCCCTTTATTTAA+TGG + chr4_3:27687388-27687407 Msa0636750:intron 25.0%
!!! ATTGATTTTCACTTTTGTTC+AGG + chr4_3:27687889-27687908 Msa0636750:intron 25.0%
!!! AAATGATGGTCTTATTCTTT+GGG + chr4_3:27688247-27688266 Msa0636750:CDS 25.0%
! ACAACCAAATATATTAGAGA+TGG + chr4_3:27689022-27689041 Msa0636750:three_prime_UTR 25.0%
! CATACCATCTCTAATATATT+TGG - chr4_3:27689029-27689048 None:intergenic 25.0%
! TAACTCATTCCATGAAATAA+TGG + chr4_3:27689319-27689338 Msa0636750:three_prime_UTR 25.0%
! CATTTCATTCCATTATTTCA+TGG - chr4_3:27689331-27689350 None:intergenic 25.0%
! AATGAGAAACCATGAAAAAA+TGG + chr4_3:27689347-27689366 Msa0636750:three_prime_UTR 25.0%
AAAGAGAAGTTATGAGAAGA+GGG - chr4_3:27679687-27679706 None:intergenic 30.0%
TCTTTCTGCAAGAGTTAAAA+GGG + chr4_3:27679702-27679721 Msa0636750:five_prime_UTR 30.0%
TTGTTCAAGATGAGACAATT+TGG - chr4_3:27679788-27679807 None:intergenic 30.0%
! AACCAAACATGTTTTCATGT+TGG + chr4_3:27679833-27679852 Msa0636750:five_prime_UTR 30.0%
ATCCAACATGAAAACATGTT+TGG - chr4_3:27679838-27679857 None:intergenic 30.0%
TAAACCAAAAGAAACAAAGG+AGG + chr4_3:27679876-27679895 Msa0636750:five_prime_UTR 30.0%
!! CACTCTTAACTTTGGAATTT+AGG + chr4_3:27680125-27680144 Msa0636750:intron 30.0%
!! CTTAACTTTGGAATTTAGGT+TGG + chr4_3:27680129-27680148 Msa0636750:intron 30.0%
ATATAGTGTTCTTATGGTAG+TGG + chr4_3:27680999-27681018 Msa0636750:intron 30.0%
!! AAATGTGACACATAGTTTTG+TGG + chr4_3:27681227-27681246 Msa0636750:intron 30.0%
CGTTAGCGCAATAAAAAAAA+CGG - chr4_3:27681749-27681768 None:intergenic 30.0%
AATAAGAGGAATTGCTCATT+TGG - chr4_3:27682222-27682241 None:intergenic 30.0%
AATAAGAGGAATTGCTCATT+TGG - chr4_3:27682222-27682241 None:intergenic 30.0%
TTTCTTACTTCTACCAGATA+AGG - chr4_3:27682895-27682914 None:intergenic 30.0%
! CTCTTTTTGAACCAAAAACA+AGG - chr4_3:27683050-27683069 None:intergenic 30.0%
GGTTCAAAAAGAGACAAAAT+TGG + chr4_3:27683057-27683076 Msa0636750:intron 30.0%
AAAAGAGACAAAATTGGAGA+AGG + chr4_3:27683063-27683082 Msa0636750:intron 30.0%
GATTCACAAGAAAAATTGAC+AGG - chr4_3:27683262-27683281 None:intergenic 30.0%
GGATAATGATGAAACCTTAT+TGG - chr4_3:27683335-27683354 None:intergenic 30.0%
ACATCAATGTCTAACACAAA+TGG + chr4_3:27683475-27683494 Msa0636750:intron 30.0%
!!! GCTAAGAAATTTTTTACGAG+GGG + chr4_3:27683651-27683670 Msa0636750:intron 30.0%
!!! CTAAGAAATTTTTTACGAGG+GGG + chr4_3:27683652-27683671 Msa0636750:intron 30.0%
GTTATTGTCTGTCTAAACAT+AGG + chr4_3:27684270-27684289 Msa0636750:intron 30.0%
! GATGTCATTTAAATCTCACT+TGG + chr4_3:27684329-27684348 Msa0636750:intron 30.0%
TTTAAATCTCACTTGGAACT+AGG + chr4_3:27684336-27684355 Msa0636750:intron 30.0%
TTAAATCTCACTTGGAACTA+GGG + chr4_3:27684337-27684356 Msa0636750:intron 30.0%
AAAAGTAGGGCTTGAAATTT+AGG - chr4_3:27684380-27684399 None:intergenic 30.0%
TTATACGGCTCTTCAAAATT+TGG - chr4_3:27684604-27684623 None:intergenic 30.0%
!!! TACTCTACTGTTTTTTTGAC+AGG - chr4_3:27684781-27684800 None:intergenic 30.0%
!!! GTTTTTTTTTTCCCTTTGAC+AGG - chr4_3:27684815-27684834 None:intergenic 30.0%
GACTTTGTTAGTCAATTTCA+GGG - chr4_3:27685220-27685239 None:intergenic 30.0%
AGACTTTGTTAGTCAATTTC+AGG - chr4_3:27685221-27685240 None:intergenic 30.0%
TTGAGGTGAATTTCATTGTT+TGG + chr4_3:27685553-27685572 Msa0636750:intron 30.0%
TGAGGAAATGTAATGTTATG+AGG + chr4_3:27685603-27685622 Msa0636750:intron 30.0%
GAGGAAATGTAATGTTATGA+GGG + chr4_3:27685604-27685623 Msa0636750:intron 30.0%
AATTTGTCCAATAGTGTGTT+TGG - chr4_3:27685696-27685715 None:intergenic 30.0%
!!! GATTTTGATTGATGTCAAGA+TGG + chr4_3:27685759-27685778 Msa0636750:intron 30.0%
CAAAAGAGAAGAATTGATCA+GGG - chr4_3:27686086-27686105 None:intergenic 30.0%
TCAAAAGAGAAGAATTGATC+AGG - chr4_3:27686087-27686106 None:intergenic 30.0%
ATTGATAAGGTTAAGAGAAG+AGG + chr4_3:27686140-27686159 Msa0636750:CDS 30.0%
TAACTCTTAGGTATAGTGTT+AGG - chr4_3:27686357-27686376 None:intergenic 30.0%
!!! TTTTTAGGATGCTAACTCTT+AGG - chr4_3:27686369-27686388 None:intergenic 30.0%
! TTTAACACTGCTGCATTTTT+AGG - chr4_3:27686384-27686403 None:intergenic 30.0%
! TTACTTCTTTTCTCAGACAA+CGG - chr4_3:27686467-27686486 None:intergenic 30.0%
TTCAGCAAATACCTTACAAT+CGG + chr4_3:27686541-27686560 Msa0636750:CDS 30.0%
TTCATTGAAAAGGTCATCTA+TGG - chr4_3:27686639-27686658 None:intergenic 30.0%
! ATAGATGACCTTTTCAATGA+AGG + chr4_3:27686638-27686657 Msa0636750:CDS 30.0%
AAATATCTTACTGTCCATTG+TGG - chr4_3:27686774-27686793 None:intergenic 30.0%
TAAAAGTTAGTTACGCTAGT+TGG - chr4_3:27686909-27686928 None:intergenic 30.0%
!!! CAAAATTTTTTGTGTCGTGT+AGG + chr4_3:27687205-27687224 Msa0636750:intron 30.0%
! GTACAACTTCTTCTGTTTTA+TGG - chr4_3:27687487-27687506 None:intergenic 30.0%
AGAAAAAATCGTAGTAGTCT+AGG - chr4_3:27687512-27687531 None:intergenic 30.0%
TATGAAAGAATAAACCGTCT+TGG + chr4_3:27687786-27687805 Msa0636750:intron 30.0%
! CTGTTTGTTGCTATAATGTA+AGG - chr4_3:27687939-27687958 None:intergenic 30.0%
! GGAAGTAATAGTTTGTAGAT+TGG - chr4_3:27687981-27688000 None:intergenic 30.0%
! TCCACATTTTAGATACACAA+TGG + chr4_3:27687998-27688017 Msa0636750:CDS 30.0%
! TCCATTGTGTATCTAAAATG+TGG - chr4_3:27688002-27688021 None:intergenic 30.0%
AAATTGCCAATGCTTATCAT+AGG - chr4_3:27688123-27688142 None:intergenic 30.0%
TAAGACCATCATTTGCATAA+GGG - chr4_3:27688241-27688260 None:intergenic 30.0%
ATAAGACCATCATTTGCATA+AGG - chr4_3:27688242-27688261 None:intergenic 30.0%
!! CAAATGATGGTCTTATTCTT+TGG + chr4_3:27688246-27688265 Msa0636750:CDS 30.0%
! TTTGGGATACTATCAAATCT+TGG + chr4_3:27688264-27688283 Msa0636750:CDS 30.0%
TTGGGATACTATCAAATCTT+GGG + chr4_3:27688265-27688284 Msa0636750:CDS 30.0%
TTGACTCATTGTTATAGTAG+TGG - chr4_3:27688307-27688326 None:intergenic 30.0%
ATAAAGAATTACAAGCATGG+TGG + chr4_3:27688342-27688361 Msa0636750:CDS 30.0%
! TGGATATTTTCCTAATAGAC+CGG + chr4_3:27688520-27688539 Msa0636750:CDS 30.0%
ACTTGACAAAATATCCAACA+CGG - chr4_3:27688672-27688691 None:intergenic 30.0%
! TCAAAAGCAGCTTTAATCAT+CGG - chr4_3:27688752-27688771 None:intergenic 30.0%
!! CTGCTTTTGAAAAGTTCAAA+GGG + chr4_3:27688762-27688781 Msa0636750:CDS 30.0%
! TTGAAGGTATAATAGATGAG+AGG + chr4_3:27688798-27688817 Msa0636750:CDS 30.0%
TCTATTCCTGAACTTCATAT+TGG - chr4_3:27688828-27688847 None:intergenic 30.0%
ATGAAGTTCAGGAATAGAAA+TGG + chr4_3:27688830-27688849 Msa0636750:CDS 30.0%
TCTCAAATAGAGACACTATA+TGG - chr4_3:27688923-27688942 None:intergenic 30.0%
ATAGTGTAATGAAGGCTAAA+TGG - chr4_3:27689282-27689301 None:intergenic 30.0%
AAGAAAGAATATCACTACTG+AGG + chr4_3:27689420-27689439 Msa0636750:three_prime_UTR 30.0%
GAACGTACATTGTTTACAGT+CGG - chr4_3:27679641-27679660 None:intergenic 35.0%
GAAAGAGAAGTTATGAGAAG+AGG - chr4_3:27679688-27679707 None:intergenic 35.0%
CTCTTTCTGCAAGAGTTAAA+AGG + chr4_3:27679701-27679720 Msa0636750:five_prime_UTR 35.0%
TTTGGTTACTTCCAATACCA+TGG - chr4_3:27679820-27679839 None:intergenic 35.0%
!! ACAACCTCCTTTGTTTCTTT+TGG - chr4_3:27679883-27679902 None:intergenic 35.0%
AGAAACAAAGGAGGTTGTTT+AGG + chr4_3:27679885-27679904 Msa0636750:five_prime_UTR 35.0%
TCAGAAATGGCTATAGAAAG+AGG + chr4_3:27680025-27680044 Msa0636750:exon 35.0%
CAGAAATGGCTATAGAAAGA+GGG + chr4_3:27680026-27680045 Msa0636750:exon 35.0%
!! TGATGACATAACCGATTTGT+TGG + chr4_3:27680051-27680070 Msa0636750:CDS 35.0%
!! GATGACATAACCGATTTGTT+GGG + chr4_3:27680052-27680071 Msa0636750:CDS 35.0%
GTTGGGTAAATCAATTCTCT+TGG + chr4_3:27680069-27680088 Msa0636750:CDS 35.0%
AAAGTTAAGAGTGACTTACC+GGG - chr4_3:27680118-27680137 None:intergenic 35.0%
CAAAGTTAAGAGTGACTTAC+CGG - chr4_3:27680119-27680138 None:intergenic 35.0%
!!! AAGGCAATGCCGATTTTTTA+CGG + chr4_3:27680271-27680290 Msa0636750:intron 35.0%
AAAAATGCCACTACAAACGT+GGG + chr4_3:27680502-27680521 Msa0636750:intron 35.0%
TCAGTGAATGTTTGGATTGA+AGG - chr4_3:27680750-27680769 None:intergenic 35.0%
!!! GTGAGTACTCCTCTTTTTTT+AGG - chr4_3:27681714-27681733 None:intergenic 35.0%
TACTATATGGGAAGGAGATA+GGG - chr4_3:27682021-27682040 None:intergenic 35.0%
ATACTATATGGGAAGGAGAT+AGG - chr4_3:27682022-27682041 None:intergenic 35.0%
!!! TACATCGAGTGTCATTTTGT+TGG - chr4_3:27682678-27682697 None:intergenic 35.0%
TAAGTACAAGATGTGACAAG+AGG - chr4_3:27682819-27682838 None:intergenic 35.0%
TTAACCTCATATGCCTTATC+TGG + chr4_3:27682879-27682898 Msa0636750:intron 35.0%
!!! TAGCAGAACGTTGTTTTTCT+AGG + chr4_3:27682917-27682936 Msa0636750:intron 35.0%
!!! AGCAGAACGTTGTTTTTCTA+GGG + chr4_3:27682918-27682937 Msa0636750:intron 35.0%
!! TTTGAAGTACCAGGAAGTTT+TGG + chr4_3:27683151-27683170 Msa0636750:CDS 35.0%
TTGTGGAAAATGAGCATAGA+AGG + chr4_3:27683191-27683210 Msa0636750:CDS 35.0%
TGTGGAAAATGAGCATAGAA+GGG + chr4_3:27683192-27683211 Msa0636750:CDS 35.0%
AAATGACCCTCTTATCATCA+GGG - chr4_3:27683309-27683328 None:intergenic 35.0%
AAAATGACCCTCTTATCATC+AGG - chr4_3:27683310-27683329 None:intergenic 35.0%
!!! GAGGGTCATTTTTTCCAATA+AGG + chr4_3:27683318-27683337 Msa0636750:CDS 35.0%
TAGACAGACAATAACACTCA+TGG - chr4_3:27684265-27684284 None:intergenic 35.0%
AAACAGTAGAGTAGTACAAG+TGG + chr4_3:27684788-27684807 Msa0636750:intron 35.0%
!! GTCACGTTTTAAACAATCCT+AGG - chr4_3:27684925-27684944 None:intergenic 35.0%
TCAGGGACTAAAATGACTAA+CGG - chr4_3:27685203-27685222 None:intergenic 35.0%
TTTGCAATTTCTCTGCATTC+AGG + chr4_3:27685256-27685275 Msa0636750:intron 35.0%
TTGCAATTTCTCTGCATTCA+GGG + chr4_3:27685257-27685276 Msa0636750:intron 35.0%
! TTCTCTAGGAAAAGAGACTT+TGG - chr4_3:27685433-27685452 None:intergenic 35.0%
AACTTAGAGTGTGTTTGGAT+TGG + chr4_3:27685485-27685504 Msa0636750:intron 35.0%
ACTTAGAGTGTGTTTGGATT+GGG + chr4_3:27685486-27685505 Msa0636750:intron 35.0%
GAGGGAATTCAAATACTTTG+AGG + chr4_3:27685536-27685555 Msa0636750:intron 35.0%
GAGGGAATTCAAATACTTTG+AGG + chr4_3:27685536-27685555 Msa0636750:intron 35.0%
TGTGTTTGGATGAGGTAATT+TGG - chr4_3:27685682-27685701 None:intergenic 35.0%
! GAAATCTCACTTGGTGAAAT+TGG - chr4_3:27685909-27685928 None:intergenic 35.0%
AAACACCAGAAGGATTGATA+AGG + chr4_3:27686127-27686146 Msa0636750:CDS 35.0%
CTTAACCTTATCAATCCTTC+TGG - chr4_3:27686135-27686154 None:intergenic 35.0%
TACGATGTGTATAATGACCT+CGG + chr4_3:27686225-27686244 Msa0636750:CDS 35.0%
! AAGAACAGGTCGTTTAAGTT+CGG - chr4_3:27686268-27686287 None:intergenic 35.0%
TAACAATGTCTATGTTCCGA+GGG + chr4_3:27686484-27686503 Msa0636750:CDS 35.0%
! GAGTTGCTTTAATTCTGAGA+AGG - chr4_3:27686516-27686535 None:intergenic 35.0%
TGAATTTACTCATCAATGGG+TGG + chr4_3:27686975-27686994 Msa0636750:intron 35.0%
AATGGGTGGTGATTTGAATA+TGG + chr4_3:27686989-27687008 Msa0636750:intron 35.0%
!!! AGGACAGATTCTTTTGGTTT+AGG + chr4_3:27687015-27687034 Msa0636750:CDS 35.0%
!!! GGACAGATTCTTTTGGTTTA+GGG + chr4_3:27687016-27687035 Msa0636750:CDS 35.0%
TGGTTTAGGGATGAAGAATT+TGG + chr4_3:27687029-27687048 Msa0636750:CDS 35.0%
TAATCCTTGTTGCATCCAAT+TGG + chr4_3:27687073-27687092 Msa0636750:CDS 35.0%
!!! TTTTTTGTGTCGTGTAGGAA+TGG + chr4_3:27687210-27687229 Msa0636750:intron 35.0%
! CAGCAGGACCATAAATTTTA+GGG - chr4_3:27687256-27687275 None:intergenic 35.0%
! TCAGCAGGACCATAAATTTT+AGG - chr4_3:27687257-27687276 None:intergenic 35.0%
TTGTTGCTCAATCATTTCAG+TGG - chr4_3:27687291-27687310 None:intergenic 35.0%
ATGATTGAGCAACAAATCAG+AGG + chr4_3:27687296-27687315 Msa0636750:CDS 35.0%
! CTTGAAGGCACAACATTATA+TGG + chr4_3:27687558-27687577 Msa0636750:CDS 35.0%
GCACAACATTATATGGATCA+AGG + chr4_3:27687565-27687584 Msa0636750:CDS 35.0%
! GAAGCACTTATAAATGCAGA+TGG + chr4_3:27688041-27688060 Msa0636750:CDS 35.0%
CAATAGCCTATGATAAGCAT+TGG + chr4_3:27688114-27688133 Msa0636750:CDS 35.0%
ATGAATGAGGTCATTTGGAA+GGG - chr4_3:27688156-27688175 None:intergenic 35.0%
TATGAATGAGGTCATTTGGA+AGG - chr4_3:27688157-27688176 None:intergenic 35.0%
!!! TTGTTAGTTTTAGGCCATGT+GGG - chr4_3:27688208-27688227 None:intergenic 35.0%
!!! ATTGTTAGTTTTAGGCCATG+TGG - chr4_3:27688209-27688228 None:intergenic 35.0%
GATTACCCTTATGCAAATGA+TGG + chr4_3:27688233-27688252 Msa0636750:CDS 35.0%
CGGATAAAGAATTACAAGCA+TGG + chr4_3:27688339-27688358 Msa0636750:CDS 35.0%
TGGTATGAGATTAGGAATGT+TGG + chr4_3:27688362-27688381 Msa0636750:CDS 35.0%
AAATAGTGACGACCATTGTT+TGG + chr4_3:27688447-27688466 Msa0636750:CDS 35.0%
GACCATTGTTTGGATTACAT+CGG + chr4_3:27688457-27688476 Msa0636750:CDS 35.0%
ACCATTGTTTGGATTACATC+GGG + chr4_3:27688458-27688477 Msa0636750:CDS 35.0%
! CATTTCAACAATGTCACTTC+CGG - chr4_3:27688614-27688633 None:intergenic 35.0%
TCATTGCTTGAATTTGCGAA+GGG - chr4_3:27688640-27688659 None:intergenic 35.0%
TTCGCAAATTCAAGCAATGA+CGG + chr4_3:27688640-27688659 Msa0636750:CDS 35.0%
! TATTTTGTCAAGTCATTCGC+CGG + chr4_3:27688679-27688698 Msa0636750:CDS 35.0%
!!! GCTGCTTTTGAAAAGTTCAA+AGG + chr4_3:27688761-27688780 Msa0636750:CDS 35.0%
!! CTTTTGAAAAGTTCAAAGGG+AGG + chr4_3:27688765-27688784 Msa0636750:CDS 35.0%
! TCTATTTGAGACACATGTTG+TGG + chr4_3:27688932-27688951 Msa0636750:exon 35.0%
ATCCAACTTGATTACATCCA+AGG + chr4_3:27689064-27689083 Msa0636750:three_prime_UTR 35.0%
TCCAACTTGATTACATCCAA+GGG + chr4_3:27689065-27689084 Msa0636750:three_prime_UTR 35.0%
! GTCACTAAAGTCTTCGTTTT+AGG + chr4_3:27689103-27689122 Msa0636750:three_prime_UTR 35.0%
! GTCTCATATGTCGACTAAAA+AGG + chr4_3:27689174-27689193 Msa0636750:three_prime_UTR 35.0%
TTGCTAGCATAGTGTAATGA+AGG - chr4_3:27689290-27689309 None:intergenic 35.0%
GAGAAGTTATGGTTATGGGA+TGG - chr4_3:27679663-27679682 None:intergenic 40.0%
GGGAGAGAAGTTATGGTTAT+GGG - chr4_3:27679667-27679686 None:intergenic 40.0%
AGGGAGAGAAGTTATGGTTA+TGG - chr4_3:27679668-27679687 None:intergenic 40.0%
! GTTTTCATGTTGGATCGTCA+AGG + chr4_3:27679843-27679862 Msa0636750:five_prime_UTR 40.0%
AACAAAGGAGGTTGTTTAGG+AGG + chr4_3:27679888-27679907 Msa0636750:five_prime_UTR 40.0%
! TGTTGGTTGAACAGTAACTG+TGG - chr4_3:27679990-27680009 None:intergenic 40.0%
GTTACTGTTCAACCAACAGT+TGG + chr4_3:27679992-27680011 Msa0636750:five_prime_UTR 40.0%
! TGGAGGACTTTTCTCAGAAA+TGG + chr4_3:27680012-27680031 Msa0636750:exon 40.0%
CGGTAAGTCACTCTTAACTT+TGG + chr4_3:27680117-27680136 Msa0636750:intron 40.0%
CAAAAATGCCACTACAAACG+TGG + chr4_3:27680501-27680520 Msa0636750:intron 40.0%
!!! TGTGACACATAGTTTTGTGG+TGG + chr4_3:27681230-27681249 Msa0636750:intron 40.0%
ATAGAAAGAGCAAGAGCAAG+AGG + chr4_3:27681651-27681670 Msa0636750:intron 40.0%
TCTACCAGATAAGGCATATG+AGG - chr4_3:27682886-27682905 None:intergenic 40.0%
!!! GCAGAACGTTGTTTTTCTAG+GGG + chr4_3:27682919-27682938 Msa0636750:intron 40.0%
GAGACAAAATTGGAGAAGGA+AGG + chr4_3:27683067-27683086 Msa0636750:intron 40.0%
TTGGAGAAGGAAGGAATCAA+AGG + chr4_3:27683076-27683095 Msa0636750:CDS 40.0%
! GAAGCTGAATTTGAAGTACC+AGG + chr4_3:27683142-27683161 Msa0636750:CDS 40.0%
CCAATATCTCCAAAACTTCC+TGG - chr4_3:27683163-27683182 None:intergenic 40.0%
!!! CCAGGAAGTTTTGGAGATAT+TGG + chr4_3:27683160-27683179 Msa0636750:CDS 40.0%
AGATATTGGTGCAGTTCTTG+TGG + chr4_3:27683174-27683193 Msa0636750:CDS 40.0%
ATGACAACCCTGATGATAAG+AGG + chr4_3:27683299-27683318 Msa0636750:CDS 40.0%
TGACAACCCTGATGATAAGA+GGG + chr4_3:27683300-27683319 Msa0636750:CDS 40.0%
TAGTTTGATCCCGAGTTTGT+TGG + chr4_3:27684572-27684591 Msa0636750:intron 40.0%
TTGGTTTCCACCAACAAACT+CGG - chr4_3:27684585-27684604 None:intergenic 40.0%
AACAGTGTAGTACAAGTGGT+CGG + chr4_3:27684839-27684858 Msa0636750:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+AGG + chr4_3:27685110-27685129 Msa0636750:intron 40.0%
GACGACTCATTTCCTATTCA+GGG - chr4_3:27685125-27685144 None:intergenic 40.0%
TGACGACTCATTTCCTATTC+AGG - chr4_3:27685126-27685145 None:intergenic 40.0%
ACTAACGAAGTCTGCATTCA+GGG - chr4_3:27685156-27685175 None:intergenic 40.0%
! TGACTACTCTTTTCCCATTC+AGG + chr4_3:27685287-27685306 Msa0636750:intron 40.0%
! GACTACTCTTTTCCCATTCA+GGG + chr4_3:27685288-27685307 Msa0636750:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - chr4_3:27685110-27685129 None:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - chr4_3:27685109-27685128 None:intergenic 40.0%
CTTAGAGTGTGTTTGGATTG+GGG + chr4_3:27685487-27685506 Msa0636750:intron 40.0%
! TGTTTGGATTGGGGAATGTT+TGG + chr4_3:27685496-27685515 Msa0636750:intron 40.0%
GAGGGAATGTAATGTTACGA+GGG + chr4_3:27685518-27685537 Msa0636750:intron 40.0%
ACCTCATCCAAACACACTAT+TGG + chr4_3:27685686-27685705 Msa0636750:intron 40.0%
TCCAATAGTGTGTTTGGATG+AGG - chr4_3:27685690-27685709 None:intergenic 40.0%
! TTACCATCTGAAACACCAGA+AGG + chr4_3:27686117-27686136 Msa0636750:CDS 40.0%
AATCCTTCTGGTGTTTCAGA+TGG - chr4_3:27686123-27686142 None:intergenic 40.0%
GAGGAACTGAAAACTTTACG+AGG + chr4_3:27686159-27686178 Msa0636750:CDS 40.0%
CTGAAAACTTTACGAGGCAA+TGG + chr4_3:27686165-27686184 Msa0636750:CDS 40.0%
! AGAACAGGTCGTTTAAGTTC+GGG - chr4_3:27686267-27686286 None:intergenic 40.0%
GAACTTAAACGACCTGTTCT+TGG + chr4_3:27686267-27686286 Msa0636750:CDS 40.0%
GCAAAGAACATCCATATCCT+AGG + chr4_3:27686292-27686311 Msa0636750:CDS 40.0%
GTAACAATGTCTATGTTCCG+AGG + chr4_3:27686483-27686502 Msa0636750:CDS 40.0%
!! ACTACAGCTGTTTTCACAAC+CGG - chr4_3:27686584-27686603 None:intergenic 40.0%
CATCTATGGCTGAGAAAAGA+GGG - chr4_3:27686625-27686644 None:intergenic 40.0%
TCATCTATGGCTGAGAAAAG+AGG - chr4_3:27686626-27686645 None:intergenic 40.0%
AGAAATCCTTTCTCAGCTTG+CGG - chr4_3:27686677-27686696 None:intergenic 40.0%
TATCTTACTGTCCATTGTGG+CGG - chr4_3:27686771-27686790 None:intergenic 40.0%
TGGTGATTTGAATATGGCAG+AGG + chr4_3:27686995-27687014 Msa0636750:intron 40.0%
TTTGGAAGACAGACTATAGC+AGG + chr4_3:27687047-27687066 Msa0636750:CDS 40.0%
TTGTTGCATCCAATTGGTCA+CGG + chr4_3:27687079-27687098 Msa0636750:CDS 40.0%
AGTAGTATACCGTGACCAAT+TGG - chr4_3:27687091-27687110 None:intergenic 40.0%
!! GGGTCAAGTTTGCTTTTCAA+TGG - chr4_3:27687236-27687255 None:intergenic 40.0%
!!! CTACGATTTTTTCTTGCCGT+TGG + chr4_3:27687518-27687537 Msa0636750:CDS 40.0%
GAGGAAGTCAGAAAACTTGA+AGG + chr4_3:27687543-27687562 Msa0636750:CDS 40.0%
!! ACCATCAACTTGTTAGTCAC+TGG + chr4_3:27687763-27687782 Msa0636750:CDS 40.0%
! ACCAGTGACTAACAAGTTGA+TGG - chr4_3:27687767-27687786 None:intergenic 40.0%
TATCGAATCGAAAGCCAAGA+CGG - chr4_3:27687803-27687822 None:intergenic 40.0%
TGCTATAATGTAAGGCTCTG+TGG - chr4_3:27687931-27687950 None:intergenic 40.0%
GGCTATTGAACTTACCAAGA+GGG - chr4_3:27688102-27688121 None:intergenic 40.0%
AGGCTATTGAACTTACCAAG+AGG - chr4_3:27688103-27688122 None:intergenic 40.0%
CCTCTATGAATGAGGTCATT+TGG - chr4_3:27688161-27688180 None:intergenic 40.0%
CCAAATGACCTCATTCATAG+AGG + chr4_3:27688158-27688177 Msa0636750:CDS 40.0%
!!! TGTTAGTTTTAGGCCATGTG+GGG - chr4_3:27688207-27688226 None:intergenic 40.0%
TGAGTCAAGAACTGTTGAGT+CGG + chr4_3:27688319-27688338 Msa0636750:CDS 40.0%
AAGCATGGTGGTATGAGATT+AGG + chr4_3:27688354-27688373 Msa0636750:CDS 40.0%
GAGATTAGGAATGTTGGTCA+CGG + chr4_3:27688368-27688387 Msa0636750:CDS 40.0%
! GTTTTCAAATTAGGCCACCA+TGG - chr4_3:27688410-27688429 None:intergenic 40.0%
CCATTGTTTGGATTACATCG+GGG + chr4_3:27688459-27688478 Msa0636750:CDS 40.0%
TTTGGTCAGTATACTTACGC+TGG + chr4_3:27688500-27688519 Msa0636750:CDS 40.0%
! GGAACTTTTCTTCGAGAAAC+CGG + chr4_3:27688592-27688611 Msa0636750:CDS 40.0%
GTCATTGCTTGAATTTGCGA+AGG - chr4_3:27688641-27688660 None:intergenic 40.0%
TCTCCAAGATATTCCTCATC+CGG - chr4_3:27688701-27688720 None:intergenic 40.0%
AAAGTTCAAAGGGAGGTTGA+TGG + chr4_3:27688772-27688791 Msa0636750:CDS 40.0%
GGAATGCCAATATGAAGTTC+AGG + chr4_3:27688819-27688838 Msa0636750:CDS 40.0%
TTCAGGAATAGAAATGGTGC+TGG + chr4_3:27688836-27688855 Msa0636750:CDS 40.0%
! GTTGGCTTCAAAAGCTCATA+AGG - chr4_3:27688869-27688888 None:intergenic 40.0%
! ATATGTCGACTAAAAAGGCC+CGG + chr4_3:27689179-27689198 Msa0636750:three_prime_UTR 40.0%
ACTCCCTAGAGATGTAATCA+GGG - chr4_3:27689257-27689276 None:intergenic 40.0%
AGAATATCACTACTGAGGTC+TGG + chr4_3:27689425-27689444 Msa0636750:three_prime_UTR 40.0%
GAATATCACTACTGAGGTCT+GGG + chr4_3:27689426-27689445 Msa0636750:three_prime_UTR 40.0%
AATATCACTACTGAGGTCTG+GGG + chr4_3:27689427-27689446 Msa0636750:three_prime_UTR 40.0%
GAGAAGAGGGAGAGAAGTTA+TGG - chr4_3:27679674-27679693 None:intergenic 45.0%
TTGAACAAGCCATGTCTCCA+TGG + chr4_3:27679800-27679819 Msa0636750:five_prime_UTR 45.0%
AAGCCATGTCTCCATGGTAT+TGG + chr4_3:27679806-27679825 Msa0636750:five_prime_UTR 45.0%
CTTCCAATACCATGGAGACA+TGG - chr4_3:27679812-27679831 None:intergenic 45.0%
ACTGTTCAACCAACAGTTGG+AGG + chr4_3:27679995-27680014 Msa0636750:five_prime_UTR 45.0%
GAGAAAAGTCCTCCAACTGT+TGG - chr4_3:27680007-27680026 None:intergenic 45.0%
GGGTGCAATAAGATAGTCTG+TGG + chr4_3:27680150-27680169 Msa0636750:intron 45.0%
! CGGCATTGCCTTATTGCTTT+AGG - chr4_3:27680263-27680282 None:intergenic 45.0%
AGCTTCGTTTCAACACTCGT+TGG - chr4_3:27680443-27680462 None:intergenic 45.0%
CTCTATACCCACGTTTGTAG+TGG - chr4_3:27680512-27680531 None:intergenic 45.0%
CACTACAAACGTGGGTATAG+AGG + chr4_3:27680510-27680529 Msa0636750:intron 45.0%
! GGGAAGGAGATAGGGATTTT+AGG - chr4_3:27682013-27682032 None:intergenic 45.0%
! GTTCTTGATGGCTTTCTCAC+TGG + chr4_3:27683235-27683254 Msa0636750:CDS 45.0%
ATCATCAGGGTTGTCATGCT+TGG - chr4_3:27683296-27683315 None:intergenic 45.0%
CGAATCCTTTCAATGGGATG+GGG - chr4_3:27684133-27684152 None:intergenic 45.0%
GCGAATCCTTTCAATGGGAT+GGG - chr4_3:27684134-27684153 None:intergenic 45.0%
CAGAGGCGAATCCTTTCAAT+GGG - chr4_3:27684139-27684158 None:intergenic 45.0%
!! TTTGATCCCGAGTTTGTTGG+TGG + chr4_3:27684575-27684594 Msa0636750:intron 45.0%
TGGTTTCCACCAACAAACTC+GGG - chr4_3:27684584-27684603 None:intergenic 45.0%
AGTACAAGTGGTCCTGTCAA+AGG + chr4_3:27684800-27684819 Msa0636750:intron 45.0%
GTACAAGTGGTCCTGTCAAA+GGG + chr4_3:27684801-27684820 Msa0636750:intron 45.0%
ACAGTGTAGTACAAGTGGTC+GGG + chr4_3:27684840-27684859 Msa0636750:intron 45.0%
GACTAACGAAGTCTGCATTC+AGG - chr4_3:27685157-27685176 None:intergenic 45.0%
GACTAACGGAGTCTACATTC+AGG - chr4_3:27685189-27685208 None:intergenic 45.0%
! TTGGATTGGGGAATGTTTGG+AGG + chr4_3:27685499-27685518 Msa0636750:intron 45.0%
! TGGATTGGGGAATGTTTGGA+GGG + chr4_3:27685500-27685519 Msa0636750:intron 45.0%
GGAGGGAATGTAATGTTACG+AGG + chr4_3:27685517-27685536 Msa0636750:intron 45.0%
ATAGGGGGTGAAATCTCACT+TGG - chr4_3:27685918-27685937 None:intergenic 45.0%
ACTTTACGAGGCAATGGACA+AGG + chr4_3:27686171-27686190 Msa0636750:CDS 45.0%
CTTAAACGACCTGTTCTTGG+TGG + chr4_3:27686270-27686289 Msa0636750:CDS 45.0%
TGTTCTTTGCCACCAAGAAC+AGG - chr4_3:27686282-27686301 None:intergenic 45.0%
GTTCTACAACGCCTAGGATA+TGG - chr4_3:27686306-27686325 None:intergenic 45.0%
! TATCCTAGGCGTTGTAGAAC+TGG + chr4_3:27686306-27686325 Msa0636750:CDS 45.0%
GGTTGTGAAAACAGCTGTAG+TGG + chr4_3:27686583-27686602 Msa0636750:CDS 45.0%
!! GCTGTAGTGGACAAGAATCT+TGG + chr4_3:27686596-27686615 Msa0636750:CDS 45.0%
ATCTTACTGTCCATTGTGGC+GGG - chr4_3:27686770-27686789 None:intergenic 45.0%
! TGGCAGAGGACAGATTCTTT+TGG + chr4_3:27687009-27687028 Msa0636750:intron 45.0%
GTGACCAATTGGATGCAACA+AGG - chr4_3:27687080-27687099 None:intergenic 45.0%
!! GTGGTTATTGCTGATTCAGC+AGG - chr4_3:27687272-27687291 None:intergenic 45.0%
AGGACATGCTACAGTTGAAG+AGG + chr4_3:27687316-27687335 Msa0636750:CDS 45.0%
TCATGCTAACTAGTGCGTCT+GGG + chr4_3:27687357-27687376 Msa0636750:intron 45.0%
!!! TTTTTTCTTGCCGTTGGTCG+AGG + chr4_3:27687524-27687543 Msa0636750:CDS 45.0%
TTTCTGACTTCCTCGACCAA+CGG - chr4_3:27687537-27687556 None:intergenic 45.0%
ACGGTCTCAATGTGCTATCA+TGG - chr4_3:27687608-27687627 None:intergenic 45.0%
TGATAGCACATTGAGACCGT+TGG + chr4_3:27687608-27687627 Msa0636750:CDS 45.0%
GTAAAGACTTGCCTCCATTC+TGG - chr4_3:27687669-27687688 None:intergenic 45.0%
GGCAAGTCTTTACACCTACT+TGG + chr4_3:27687676-27687695 Msa0636750:CDS 45.0%
! ACTCAACTGGTGTTTGGCTT+TGG + chr4_3:27687700-27687719 Msa0636750:CDS 45.0%
ATGAGCAAGGACATGAGCTT+TGG - chr4_3:27687733-27687752 None:intergenic 45.0%
ACCAAGAGGGAGAGTTGTTT+GGG - chr4_3:27688089-27688108 None:intergenic 45.0%
TACCAAGAGGGAGAGTTGTT+TGG - chr4_3:27688090-27688109 None:intergenic 45.0%
CTGCTAGTCCTCTATGAATG+AGG - chr4_3:27688169-27688188 None:intergenic 45.0%
AAAGATCCAAATGCCCCACA+TGG + chr4_3:27688191-27688210 Msa0636750:CDS 45.0%
GTGACAAGAAAGACGAACCA+TGG + chr4_3:27688390-27688409 Msa0636750:CDS 45.0%
ACAAGAAAGACGAACCATGG+TGG + chr4_3:27688393-27688412 Msa0636750:CDS 45.0%
CCCCGATGTAATCCAAACAA+TGG - chr4_3:27688462-27688481 None:intergenic 45.0%
! CATCATGCTGCGGTGAATTT+TGG + chr4_3:27688482-27688501 Msa0636750:CDS 45.0%
!! ATGTTGTTTCGTGCAATGGC+CGG - chr4_3:27688542-27688561 None:intergenic 45.0%
!! AGGCATGTTGTTTCGTGCAA+TGG - chr4_3:27688546-27688565 None:intergenic 45.0%
TCTTGGAGAAACGATTGAGC+CGG + chr4_3:27688712-27688731 Msa0636750:CDS 45.0%
! ACACCTTTTCCTGTTACACC+AGG - chr4_3:27688899-27688918 None:intergenic 45.0%
GCCCTTGGATGTAATCAAGT+TGG - chr4_3:27689069-27689088 None:intergenic 45.0%
CACTCCCTAGAGATGTAATC+AGG - chr4_3:27689258-27689277 None:intergenic 45.0%
ATATCACTACTGAGGTCTGG+GGG + chr4_3:27689428-27689447 Msa0636750:three_prime_UTR 45.0%
!! GTATAAAATAATTTAAATAA+AGG - chr4_3:27681141-27681160 None:intergenic 5.0%
!! TAAAAAAATAGTTTAAATAA+AGG - chr4_3:27681276-27681295 None:intergenic 5.0%
!! TTGTTTAATATTTAAATAAA+TGG + chr4_3:27682146-27682165 Msa0636750:intron 5.0%
!! TTAATTAATTATTTAATTGT+TGG - chr4_3:27682265-27682284 None:intergenic 5.0%
!! AATTTATAATAGTTAAAAAA+AGG + chr4_3:27683540-27683559 Msa0636750:intron 5.0%
!!! TCAATATAAATAAAAATTTT+GGG + chr4_3:27684094-27684113 Msa0636750:intron 5.0%
!! AAAATAAAATTTAGTATAAT+TGG + chr4_3:27684754-27684773 Msa0636750:intron 5.0%
!! AATTATTATTGAAATAATTT+AGG + chr4_3:27684958-27684977 Msa0636750:intron 5.0%
!!! ATAATTGTATAATAATTTTA+GGG - chr4_3:27685331-27685350 None:intergenic 5.0%
!!! TTTAAAAAATTTAAAATTCT+AGG - chr4_3:27685655-27685674 None:intergenic 5.0%
!!! AAAAATATTTTTTTTTATTG+GGG - chr4_3:27689131-27689150 None:intergenic 5.0%
!!! GAAAAATATTTTTTTTTATT+GGG - chr4_3:27689132-27689151 None:intergenic 5.0%
!!! TGAAAAATATTTTTTTTTAT+TGG - chr4_3:27689133-27689152 None:intergenic 5.0%
TGACTTACCGGGATCTAGCT+CGG - chr4_3:27680107-27680126 None:intergenic 50.0%
CGGATAAACGAGCACAAGAG+TGG - chr4_3:27680847-27680866 None:intergenic 50.0%
CTTCCACTGATCTATGCGTC+TGG - chr4_3:27683111-27683130 None:intergenic 50.0%
TCAATGGGATGGGGTAGCTT+TGG - chr4_3:27684124-27684143 None:intergenic 50.0%
AGCTACCCCATCCCATTGAA+AGG + chr4_3:27684125-27684144 Msa0636750:intron 50.0%
GGCGAATCCTTTCAATGGGA+TGG - chr4_3:27684135-27684154 None:intergenic 50.0%
CCAGAGGCGAATCCTTTCAA+TGG - chr4_3:27684140-27684159 None:intergenic 50.0%
CCATTGAAAGGATTCGCCTC+TGG + chr4_3:27684137-27684156 Msa0636750:intron 50.0%
TTAAGTTCGGGATCGCTGTC+TGG - chr4_3:27686255-27686274 None:intergenic 50.0%
CTTCCAGTTCTACAACGCCT+AGG - chr4_3:27686312-27686331 None:intergenic 50.0%
TCTGAGAAGGATTCGTCCCT+CGG - chr4_3:27686503-27686522 None:intergenic 50.0%
TGCGTGGAAAGCCGATTGTA+AGG - chr4_3:27686555-27686574 None:intergenic 50.0%
! GGCTTTCCACGCACTTTTAC+CGG + chr4_3:27686562-27686581 Msa0636750:CDS 50.0%
! TCACAACCGGTAAAAGTGCG+TGG - chr4_3:27686571-27686590 None:intergenic 50.0%
AATCCTTTCTCAGCTTGCGG+AGG - chr4_3:27686674-27686693 None:intergenic 50.0%
TTCTTGCGTCTGTGTTGCCA+AGG + chr4_3:27686693-27686712 Msa0636750:CDS 50.0%
TTGACAAGCCTGACCAACCT+TGG - chr4_3:27686713-27686732 None:intergenic 50.0%
GTTGGTCAGGCTTGTCAATG+AGG + chr4_3:27686715-27686734 Msa0636750:CDS 50.0%
TCAGGCTTGTCAATGAGGCT+AGG + chr4_3:27686720-27686739 Msa0636750:CDS 50.0%
GTCATGCTAACTAGTGCGTC+TGG + chr4_3:27687356-27687375 Msa0636750:intron 50.0%
!! CATTCTGGCTTTCCGCCAAT+TGG - chr4_3:27687654-27687673 None:intergenic 50.0%
CAATTGGCGGAAAGCCAGAA+TGG + chr4_3:27687652-27687671 Msa0636750:CDS 50.0%
ACACCTACTTGGCACTCAAC+TGG + chr4_3:27687687-27687706 Msa0636750:CDS 50.0%
ACACCAGTTGAGTGCCAAGT+AGG - chr4_3:27687693-27687712 None:intergenic 50.0%
CTTGGCACTCAACTGGTGTT+TGG + chr4_3:27687694-27687713 Msa0636750:CDS 50.0%
!! CAACTGGTGTTTGGCTTTGG+AGG + chr4_3:27687703-27687722 Msa0636750:CDS 50.0%
CATGTCCTTGCTCATGACTC+TGG + chr4_3:27687738-27687757 Msa0636750:CDS 50.0%
TCCCAAACAACTCTCCCTCT+TGG + chr4_3:27688085-27688104 Msa0636750:CDS 50.0%
! TTTAGGCCATGTGGGGCATT+TGG - chr4_3:27688200-27688219 None:intergenic 50.0%
CATGCCTACAGAAGACCCTT+CGG + chr4_3:27688559-27688578 Msa0636750:CDS 50.0%
AATGACGGTGATGACCGTGT+TGG + chr4_3:27688655-27688674 Msa0636750:CDS 50.0%
TCGCCGGATGAGGAATATCT+TGG + chr4_3:27688695-27688714 Msa0636750:CDS 50.0%
TTGAAGCCAACATCAGAGCC+TGG + chr4_3:27688878-27688897 Msa0636750:CDS 50.0%
! GTTACACCAGGCTCTGATGT+TGG - chr4_3:27688887-27688906 None:intergenic 50.0%
ACATCAGAGCCTGGTGTAAC+AGG + chr4_3:27688887-27688906 Msa0636750:CDS 50.0%
GAGCCTGGTGTAACAGGAAA+AGG + chr4_3:27688893-27688912 Msa0636750:CDS 50.0%
CCTAGAGATGTAATCAGGGC+CGG - chr4_3:27689253-27689272 None:intergenic 50.0%
CGGCCCTGATTACATCTCTA+GGG + chr4_3:27689251-27689270 Msa0636750:three_prime_UTR 50.0%
GTTAGCTCCGAGCTAGATCC+CGG + chr4_3:27680097-27680116 Msa0636750:CDS 55.0%
CCACTGATCTATGCGTCTGG+TGG - chr4_3:27683108-27683127 None:intergenic 55.0%
CCACCAGACGCATAGATCAG+TGG + chr4_3:27683105-27683124 Msa0636750:CDS 55.0%
GGAAGACCTCGTTGCGATAC+AGG + chr4_3:27686327-27686346 Msa0636750:CDS 55.0%
GACCTCGTTGCGATACAGGT+AGG + chr4_3:27686331-27686350 Msa0636750:intron 55.0%
TTGCCTCCGCAAGCTGAGAA+AGG + chr4_3:27686668-27686687 Msa0636750:CDS 55.0%
TGCGTCTGTGTTGCCAAGGT+TGG + chr4_3:27686697-27686716 Msa0636750:CDS 55.0%
! CTGTGTTGCCAAGGTTGGTC+AGG + chr4_3:27686702-27686721 Msa0636750:CDS 55.0%
! TTGTGGCGGGAGTCTCGAAA+CGG - chr4_3:27686757-27686776 None:intergenic 55.0%
TTTCGAGACTCCCGCCACAA+TGG + chr4_3:27686757-27686776 Msa0636750:CDS 55.0%
! AACTAGTGCGTCTGGGACAC+TGG + chr4_3:27687364-27687383 Msa0636750:intron 55.0%
CGAGCTAACTCGATCGCCAA+CGG - chr4_3:27687627-27687646 None:intergenic 55.0%
CGTTGGCGATCGAGTTAGCT+CGG + chr4_3:27687625-27687644 Msa0636750:CDS 55.0%
!! TCTGGCTTTCCGCCAATTGG+CGG - chr4_3:27687651-27687670 None:intergenic 55.0%
TTGGCGGAAAGCCAGAATGG+AGG + chr4_3:27687655-27687674 Msa0636750:CDS 55.0%
GGTAGCCAGAGTCATGAGCA+AGG - chr4_3:27687746-27687765 None:intergenic 55.0%
! TACATCGGGGCATCATGCTG+CGG + chr4_3:27688472-27688491 Msa0636750:CDS 55.0%
CGTGCAATGGCCGGTCTATT+AGG - chr4_3:27688533-27688552 None:intergenic 55.0%
CTGTCCGAAGGGTCTTCTGT+AGG - chr4_3:27688566-27688585 None:intergenic 55.0%
AAGACCCTTCGGACAGCGAA+TGG + chr4_3:27688570-27688589 Msa0636750:CDS 55.0%
AGACCCTTCGGACAGCGAAT+GGG + chr4_3:27688571-27688590 Msa0636750:CDS 55.0%
GTTCCCATTCGCTGTCCGAA+GGG - chr4_3:27688577-27688596 None:intergenic 55.0%
AGTTCCCATTCGCTGTCCGA+AGG - chr4_3:27688578-27688597 None:intergenic 55.0%
GTCAAGTCATTCGCCGGATG+AGG + chr4_3:27688685-27688704 Msa0636750:CDS 55.0%
GAGAAACGATTGAGCCGGCT+TGG + chr4_3:27688717-27688736 Msa0636750:CDS 55.0%
! ATCGGTTCCTCTTGCCAAGC+CGG - chr4_3:27688734-27688753 None:intergenic 55.0%
!! GGGAGGTTGATGGAGCTTGA+AGG + chr4_3:27688782-27688801 Msa0636750:CDS 55.0%
CCTTACTCTTGAGTCGCCCT+TGG - chr4_3:27689084-27689103 None:intergenic 55.0%
CCAAGGGCGACTCAAGAGTA+AGG + chr4_3:27689081-27689100 Msa0636750:three_prime_UTR 55.0%
CCGGCCCTGATTACATCTCT+AGG + chr4_3:27689250-27689269 Msa0636750:three_prime_UTR 55.0%
GATCGCTGTCTGGATCACCG+AGG - chr4_3:27686245-27686264 None:intergenic 60.0%
GGCCTACCTGTATCGCAACG+AGG - chr4_3:27686336-27686355 None:intergenic 60.0%
GAGTTAGCTCGGCCGCCAAT+TGG + chr4_3:27687636-27687655 Msa0636750:CDS 60.0%
TTAGCTCGGCCGCCAATTGG+CGG + chr4_3:27687639-27687658 Msa0636750:CDS 60.0%
!! GATTGAGCCGGCTTGGCAAG+AGG + chr4_3:27688724-27688743 Msa0636750:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 27679636 27689471 27679636 ID=Msa0636750;Name=Msa0636750
chr4_3 mRNA 27679636 27689471 27679636 ID=Msa0636750-mRNA-1;Parent=Msa0636750;Name=Msa0636750-mRNA-1;_AED=0.08;_eAED=0.08;_QI=395|1|1|1|1|1|8|531|815
chr4_3 exon 27679636 27680118 27679636 ID=Msa0636750-mRNA-1:exon:6849;Parent=Msa0636750-mRNA-1
chr4_3 exon 27683068 27683339 27683068 ID=Msa0636750-mRNA-1:exon:6850;Parent=Msa0636750-mRNA-1
chr4_3 exon 27686111 27686348 27686111 ID=Msa0636750-mRNA-1:exon:6851;Parent=Msa0636750-mRNA-1
chr4_3 exon 27686462 27686782 27686462 ID=Msa0636750-mRNA-1:exon:6852;Parent=Msa0636750-mRNA-1
chr4_3 exon 27687015 27687100 27687015 ID=Msa0636750-mRNA-1:exon:6853;Parent=Msa0636750-mRNA-1
chr4_3 exon 27687227 27687337 27687227 ID=Msa0636750-mRNA-1:exon:6854;Parent=Msa0636750-mRNA-1
chr4_3 exon 27687483 27687784 27687483 ID=Msa0636750-mRNA-1:exon:6855;Parent=Msa0636750-mRNA-1
chr4_3 exon 27687911 27689471 27687911 ID=Msa0636750-mRNA-1:exon:6856;Parent=Msa0636750-mRNA-1
chr4_3 five_prime_UTR 27679636 27680030 27679636 ID=Msa0636750-mRNA-1:five_prime_utr;Parent=Msa0636750-mRNA-1
chr4_3 CDS 27680031 27680118 27680031 ID=Msa0636750-mRNA-1:cds;Parent=Msa0636750-mRNA-1
chr4_3 CDS 27683068 27683339 27683068 ID=Msa0636750-mRNA-1:cds;Parent=Msa0636750-mRNA-1
chr4_3 CDS 27686111 27686348 27686111 ID=Msa0636750-mRNA-1:cds;Parent=Msa0636750-mRNA-1
chr4_3 CDS 27686462 27686782 27686462 ID=Msa0636750-mRNA-1:cds;Parent=Msa0636750-mRNA-1
chr4_3 CDS 27687015 27687100 27687015 ID=Msa0636750-mRNA-1:cds;Parent=Msa0636750-mRNA-1
chr4_3 CDS 27687227 27687337 27687227 ID=Msa0636750-mRNA-1:cds;Parent=Msa0636750-mRNA-1
chr4_3 CDS 27687483 27687784 27687483 ID=Msa0636750-mRNA-1:cds;Parent=Msa0636750-mRNA-1
chr4_3 CDS 27687911 27688940 27687911 ID=Msa0636750-mRNA-1:cds;Parent=Msa0636750-mRNA-1
chr4_3 three_prime_UTR 27688941 27689471 27688941 ID=Msa0636750-mRNA-1:three_prime_utr;Parent=Msa0636750-mRNA-1
Gene Sequence

>Msa0636750

ATGGCTATAGAAAGAGGGCTTGATGACATAACCGATTTGTTGGGTAAATCAATTCTCTTGGAGTTTGTTAGCTCCGAGCTAGATCCCGAGACAAAATTGGAGAAGGAAGGAATCAAAGGTTACGTCCACCAGACGCATAGATCAGTGGAAGAGATTAAATATGAAGCTGAATTTGAAGTACCAGGAAGTTTTGGAGATATTGGTGCAGTTCTTGTGGAAAATGAGCATAGAAGGGAAATGTTTATAAAGCAAATTGTTCTTGATGGCTTTCTCACTGGTCCTGTCAATTTTTCTTGTGAATCATGGGTTCATTCCAAGCATGACAACCCTGATGATAAGAGGGTCATTTTTTCCAATAAGTCATATTTACCATCTGAAACACCAGAAGGATTGATAAGGTTAAGAGAAGAGGAACTGAAAACTTTACGAGGCAATGGACAAGGCGAACGCAAGAAATTTGATAGAATATACGATTACGATGTGTATAATGACCTCGGTGATCCAGACAGCGATCCCGAACTTAAACGACCTGTTCTTGGTGGCAAAGAACATCCATATCCTAGGCGTTGTAGAACTGGAAGACCTCGTTGCGATACAGATCCGTTGTCTGAGAAAAGAAGTAACAATGTCTATGTTCCGAGGGACGAATCCTTCTCAGAATTAAAGCAACTCTCGTTTTCAGCAAATACCTTACAATCGGCTTTCCACGCACTTTTACCGGTTGTGAAAACAGCTGTAGTGGACAAGAATCTTGGATTCCCTCTTTTCTCAGCCATAGATGACCTTTTCAATGAAGGATTTAACTTGCCTCCGCAAGCTGAGAAAGGATTTCTTGCGTCTGTGTTGCCAAGGTTGGTCAGGCTTGTCAATGAGGCTAGGAATGACATTCTCCGTTTCGAGACTCCCGCCACAATGGACAAGGACAGATTCTTTTGGTTTAGGGATGAAGAATTTGGAAGACAGACTATAGCAGGTCTTAATCCTTGTTGCATCCAATTGGTCACGGAATGGCCATTGAAAAGCAAACTTGACCCTAAAATTTATGGTCCTGCTGAATCAGCAATAACCACTGAAATGATTGAGCAACAAATCAGAGGACATGCTACAGTTGAAGAGGCCATAAAACAGAAGAAGTTGTACATCCTAGACTACTACGATTTTTTCTTGCCGTTGGTCGAGGAAGTCAGAAAACTTGAAGGCACAACATTATATGGATCAAGGACATTGTTCTTTCTGAACCATGATAGCACATTGAGACCGTTGGCGATCGAGTTAGCTCGGCCGCCAATTGGCGGAAAGCCAGAATGGAGGCAAGTCTTTACACCTACTTGGCACTCAACTGGTGTTTGGCTTTGGAGGCTTGCCAAAGCTCATGTCCTTGCTCATGACTCTGGCTACCATCAACTTGTTAGTCACTGGTTGAGAACTCATTGTGCCACAGAGCCTTACATTATAGCAACAAACAGACAACTAAGTGCAATGCATCCAATCTACAAACTATTACTTCCACATTTTAGATACACAATGGAAATCAATGCACTTGCACGTGAAGCACTTATAAATGCAGATGGAATAATTGAGAGTAGTTTCACTCCCAAACAACTCTCCCTCTTGGTAAGTTCAATAGCCTATGATAAGCATTGGCAATTTGACTTGCAAGCCCTTCCAAATGACCTCATTCATAGAGGACTAGCAGAAAAAGATCCAAATGCCCCACATGGCCTAAAACTAACAATAGAAGATTACCCTTATGCAAATGATGGTCTTATTCTTTGGGATACTATCAAATCTTGGGTCACTGATTATGTTAACCACTACTATAACAATGAGTCAAGAACTGTTGAGTCGGATAAAGAATTACAAGCATGGTGGTATGAGATTAGGAATGTTGGTCACGGTGACAAGAAAGACGAACCATGGTGGCCTAATTTGAAAACAAATGATGATCTTGTTGAAATAGTGACGACCATTGTTTGGATTACATCGGGGCATCATGCTGCGGTGAATTTTGGTCAGTATACTTACGCTGGATATTTTCCTAATAGACCGGCCATTGCACGAAACAACATGCCTACAGAAGACCCTTCGGACAGCGAATGGGAACTTTTCTTCGAGAAACCGGAAGTGACATTGTTGAAATGTTTCCCTTCGCAAATTCAAGCAATGACGGTGATGACCGTGTTGGATATTTTGTCAAGTCATTCGCCGGATGAGGAATATCTTGGAGAAACGATTGAGCCGGCTTGGCAAGAGGAACCGATGATTAAAGCTGCTTTTGAAAAGTTCAAAGGGAGGTTGATGGAGCTTGAAGGTATAATAGATGAGAGGAATGCCAATATGAAGTTCAGGAATAGAAATGGTGCTGGAATTTTGCCTTATGAGCTTTTGAAGCCAACATCAGAGCCTGGTGTAACAGGAAAAGGTGTTCCATATAGTGTCTCTATTTGA
Protein sequence

>Msa0636750

MAIERGLDDITDLLGKSILLEFVSSELDPETKLEKEGIKGYVHQTHRSVEEIKYEAEFEVPGSFGDIGAVLVENEHRREMFIKQIVLDGFLTGPVNFSCESWVHSKHDNPDDKRVIFSNKSYLPSETPEGLIRLREEELKTLRGNGQGERKKFDRIYDYDVYNDLGDPDSDPELKRPVLGGKEHPYPRRCRTGRPRCDTDPLSEKRSNNVYVPRDESFSELKQLSFSANTLQSAFHALLPVVKTAVVDKNLGFPLFSAIDDLFNEGFNLPPQAEKGFLASVLPRLVRLVNEARNDILRFETPATMDKDRFFWFRDEEFGRQTIAGLNPCCIQLVTEWPLKSKLDPKIYGPAESAITTEMIEQQIRGHATVEEAIKQKKLYILDYYDFFLPLVEEVRKLEGTTLYGSRTLFFLNHDSTLRPLAIELARPPIGGKPEWRQVFTPTWHSTGVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCATEPYIIATNRQLSAMHPIYKLLLPHFRYTMEINALAREALINADGIIESSFTPKQLSLLVSSIAYDKHWQFDLQALPNDLIHRGLAEKDPNAPHGLKLTIEDYPYANDGLILWDTIKSWVTDYVNHYYNNESRTVESDKELQAWWYEIRNVGHGDKKDEPWWPNLKTNDDLVEIVTTIVWITSGHHAAVNFGQYTYAGYFPNRPAIARNNMPTEDPSDSEWELFFEKPEVTLLKCFPSQIQAMTVMTVLDILSSHSPDEEYLGETIEPAWQEEPMIKAAFEKFKGRLMELEGIIDERNANMKFRNRNGAGILPYELLKPTSEPGVTGKGVPYSVSI*