AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0505180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0505180 MtrunA17_Chr3g0105901 96.904 323 10 0 7 329 630 952 0.0 654
Msa0505180 MtrunA17_Chr5g0444511 32.258 217 109 7 4 189 427 636 1.27e-23 101
Msa0505180 MtrunA17_Chr3g0099361 29.508 244 133 8 4 215 501 737 2.99e-20 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0505180 AT5G58510.1 61.128 337 118 5 3 329 630 963 2.00e-137 413
Msa0505180 AT5G58510.2 61.504 226 84 2 3 228 630 852 1.96e-94 299
Msa0505180 AT5G55060.3 35.065 231 96 8 4 203 322 529 1.92e-26 110
Msa0505180 AT5G55060.2 35.065 231 96 8 4 203 322 529 1.92e-26 110
Msa0505180 AT5G55060.1 35.065 231 96 8 4 203 415 622 2.26e-26 110

Find 200 sgRNAs with CRISPR-Local

Find 1049 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAACTTTGTTCTAGGTAAA+AGG 0.153890 3_4:+50549812 Msa0505180:intron
CAAGCCTGCAAATTGGAATT+TGG 0.195936 3_4:+50550030 Msa0505180:five_prime_UTR
ATTTCACCCTTGCTTCTTCC+TGG 0.232958 3_4:+50548854 Msa0505180:five_prime_UTR
ATTAATTTGATGTTGTTTAT+TGG 0.249300 3_4:+50564327 Msa0505180:exon
TCCAATAAAACTTATGCATT+TGG 0.259281 3_4:+50550483 Msa0505180:five_prime_UTR
TTCAAGCTTGTTCCCATTGT+TGG 0.261462 3_4:-50563888 None:intergenic
GAGACAGGAACTCACAAATT+TGG 0.279202 3_4:-50550530 None:intergenic
TGTCAGCCATTTCTGTACTA+TGG 0.283856 3_4:+50557167 Msa0505180:intron
CCTTCTCGGAAAGCTTATAT+TGG 0.286136 3_4:+50550397 Msa0505180:five_prime_UTR
TCATAACAATTACCTTTAAC+AGG 0.293198 3_4:-50551276 None:intergenic
TGACCTACGTGTTGCACTTT+CGG 0.295352 3_4:+50564292 Msa0505180:CDS
TAGAGGCTGTTTGCCGGCTT+TGG 0.301802 3_4:+50549300 Msa0505180:five_prime_UTR
GAAATTTGTGGAGAAAGATT+TGG 0.305936 3_4:+50561374 Msa0505180:CDS
TCTGCAGAAGATCCTGTTAA+AGG 0.306445 3_4:+50551264 Msa0505180:five_prime_UTR
CATTGAGGATTTCAAATTAT+CGG 0.306833 3_4:-50552740 None:intergenic
GCAGTTCTCTTGGAGTATTC+TGG 0.306853 3_4:+50549836 Msa0505180:five_prime_UTR
TTGACAACACTTCTCTTTCA+TGG 0.308470 3_4:-50564067 None:intergenic
TTAAGTCTTTACCTGAAGTT+AGG 0.319108 3_4:-50560607 None:intergenic
AAATCCAAATTCCAATTTGC+AGG 0.320981 3_4:-50550034 None:intergenic
TTCTATGGAAATGGCTGAAC+TGG 0.322774 3_4:+50551963 Msa0505180:five_prime_UTR
TGTTTACATTCTCTTTGGTT+TGG 0.330319 3_4:+50557005 Msa0505180:five_prime_UTR
CACGATCTGCAGTTATGTTT+CGG 0.330557 3_4:+50550058 Msa0505180:five_prime_UTR
TCAGATGAATGAAGATTATC+AGG 0.342556 3_4:+50557668 Msa0505180:five_prime_UTR
AAATCTGAAGAAAATCTTAC+TGG 0.346213 3_4:+50551186 Msa0505180:five_prime_UTR
TTCCAGTTCACGATCCTTCT+CGG 0.355995 3_4:+50550383 Msa0505180:five_prime_UTR
ACGCAGGCAAGCCTGCAAAT+TGG 0.358232 3_4:+50550023 Msa0505180:five_prime_UTR
CTGAAATAGAGGCTGTTTGC+CGG 0.364549 3_4:+50549294 Msa0505180:five_prime_UTR
AGTTCACCTGTCAACTTTCC+CGG 0.366304 3_4:-50557901 None:intergenic
GAAGATGGTTGAAAGTTCTA+TGG 0.366567 3_4:+50551948 Msa0505180:five_prime_UTR
AGAAGTGGTTGATCTCTCTA+AGG 0.374421 3_4:+50552010 Msa0505180:five_prime_UTR
ACATCAATTGCTTGAACAAA+TGG 0.382687 3_4:+50563499 Msa0505180:CDS
TTCGAGAGGTTAGGTGGTGT+TGG 0.390276 3_4:+50557200 Msa0505180:five_prime_UTR
TTCTTCCATGTCTTCAACTT+CGG 0.394276 3_4:-50548710 None:intergenic
AGCAGATCGCATTGGTAGTC+AGG 0.397737 3_4:+50550459 Msa0505180:five_prime_UTR
AATGGGATGATGATTGTTCT+TGG 0.400326 3_4:+50551229 Msa0505180:five_prime_UTR
TTATACAGGTCCGTATCTTC+AGG 0.400955 3_4:-50559219 None:intergenic
TAACTTTGTTCTAGGTAAAA+GGG 0.401392 3_4:+50549813 Msa0505180:intron
GAAAGAAGAGGTTGTTGAAA+AGG 0.405819 3_4:+50563908 Msa0505180:CDS
CTACCATGGCATCTGCTTTG+AGG 0.406678 3_4:+50563615 Msa0505180:CDS
ACTACACCACTTGCACTTTG+AGG 0.410067 3_4:-50550195 None:intergenic
CCCTTGCTTCTTCCTGGGAA+CGG 0.416166 3_4:+50548860 Msa0505180:five_prime_UTR
GGTGGCATTCACCTGGAGAT+TGG 0.417522 3_4:+50561233 Msa0505180:CDS
AGGTAGGATCTTCGTCTTGC+CGG 0.420190 3_4:-50548662 None:intergenic
CATCAACAAGAACATGCAAC+TGG 0.420882 3_4:-50552524 None:intergenic
GGTAAAAGGGGCAGTTCTCT+TGG 0.422286 3_4:+50549826 Msa0505180:intron
CTCTATCCATAGTACAGAAA+TGG 0.426739 3_4:-50557173 None:intergenic
CGATAATTTGAAATCCTCAA+TGG 0.428406 3_4:+50552741 Msa0505180:five_prime_UTR
TGGGCACTGTATTCACTAGA+AGG 0.428991 3_4:+50550431 Msa0505180:five_prime_UTR
CACAATATGGTCAGAGAAGA+TGG 0.429747 3_4:+50551933 Msa0505180:five_prime_UTR
TTGCTTTGTCGAATTGTTCA+AGG 0.435752 3_4:+50550262 Msa0505180:five_prime_UTR
GTGGCATTCACCTGGAGATT+GGG 0.435816 3_4:+50561234 Msa0505180:CDS
AGAGGCTTCTGTTCCGAAGC+AGG 0.442981 3_4:-50561415 None:intergenic
CTCCCACAGCTAACCAGTCT+TGG 0.443303 3_4:+50564102 Msa0505180:CDS
TTTCACCCTTGCTTCTTCCT+GGG 0.443811 3_4:+50548855 Msa0505180:five_prime_UTR
TCGAGAGGTTAGGTGGTGTT+GGG 0.444848 3_4:+50557201 Msa0505180:five_prime_UTR
ATGTTAGCTTCATTGCAATT+CGG 0.447445 3_4:-50551107 None:intergenic
GTTGGAGAAACCTGTGTGTA+CGG 0.450152 3_4:-50559333 None:intergenic
CTTCGTCTTGCCGGTGTTGG+TGG 0.450440 3_4:-50548653 None:intergenic
TGTTATGTATACAGACTTGA+AGG 0.450998 3_4:+50552471 Msa0505180:intron
GTTTATTGGTCTCAAACTCA+TGG 0.451131 3_4:+50564341 Msa0505180:three_prime_UTR
AAGTCTTCAAAAGTAGCATC+TGG 0.452459 3_4:-50561205 None:intergenic
AATAAAACTTATGCATTTGG+AGG 0.453146 3_4:+50550486 Msa0505180:five_prime_UTR
TAAGACTTCGCGATCTGTAA+AGG 0.454497 3_4:+50556950 Msa0505180:five_prime_UTR
CTCACCTGCTCTTCCTGCTT+CGG 0.456403 3_4:+50561402 Msa0505180:CDS
AAAATAAGTTGAAAGATAGT+TGG 0.461931 3_4:+50561311 Msa0505180:CDS
TTCATATAGTCCTCATCAAA+GGG 0.462254 3_4:-50551141 None:intergenic
TTCCGAGAAGGATCGTGAAC+TGG 0.464690 3_4:-50550385 None:intergenic
ACGCTAAGTCAGACTAGTTA+TGG 0.464886 3_4:+50563551 Msa0505180:CDS
AGCTAACCAGTCTTGGAGAA+AGG 0.466504 3_4:+50564109 Msa0505180:CDS
CGTGTCAGCTGCCGCTCTGA+AGG 0.468088 3_4:-50563531 None:intergenic
TAGGTTTATTTCTGAAATAG+AGG 0.471512 3_4:+50549283 Msa0505180:intron
GAAAAGGATATCCTAACTTC+AGG 0.473184 3_4:+50560596 Msa0505180:five_prime_UTR
TTTATTCGGTGGCATTCACC+TGG 0.474759 3_4:+50561226 Msa0505180:CDS
TAGAGTTTGTTCGAGAGGTT+AGG 0.477130 3_4:+50557191 Msa0505180:five_prime_UTR
ATGATTGTTCTTGGAGTGAA+TGG 0.477314 3_4:+50551238 Msa0505180:five_prime_UTR
TGCATTGCAAATGTCATTTG+AGG 0.478123 3_4:+50552545 Msa0505180:five_prime_UTR
TGATGCTGATCCACTGCTCT+CGG 0.481314 3_4:-50561272 None:intergenic
GCAGTTATGTTTCGGTGTAA+AGG 0.483595 3_4:+50550066 Msa0505180:five_prime_UTR
GGTTGAAAGTTCTATGGAAA+TGG 0.489937 3_4:+50551954 Msa0505180:five_prime_UTR
CTCAACAGTTTGCTAGCCTC+TGG 0.490161 3_4:-50550228 None:intergenic
TCAAAACCTTTCTCCAAGAC+TGG 0.491818 3_4:-50564115 None:intergenic
TGAAGGTTCTAAAGAGAGTC+GGG 0.494547 3_4:+50552488 Msa0505180:five_prime_UTR
CTGAAAGAACTGTTTATTGA+AGG 0.497176 3_4:+50552796 Msa0505180:five_prime_UTR
GATCTTCGTCTTGCCGGTGT+TGG 0.498167 3_4:-50548656 None:intergenic
TCATCGTCATCAGTAGAATC+AGG 0.499159 3_4:-50548682 None:intergenic
GGATCTAAACTCTGAAGAAA+AGG 0.499370 3_4:+50548490 None:intergenic
AAGACTTCGCGATCTGTAAA+GGG 0.501476 3_4:+50556951 Msa0505180:five_prime_UTR
CTCCAAGACTGGTTAGCTGT+GGG 0.501930 3_4:-50564104 None:intergenic
AAAATAATCTCCCTGAGGAT+TGG 0.503477 3_4:-50564167 None:intergenic
ATGGTCACGAACCAATCCTC+AGG 0.503857 3_4:+50564156 Msa0505180:CDS
TTGGAGAAACCTGTGTGTAC+GGG 0.509109 3_4:-50559332 None:intergenic
AATAACTAGTTACCTTGTAA+AGG 0.510806 3_4:-50563638 None:intergenic
CGTCTTGCCGGTGTTGGTGG+AGG 0.513140 3_4:-50548650 None:intergenic
CCAATATAAGCTTTCCGAGA+AGG 0.513716 3_4:-50550397 None:intergenic
TGCCGGCTTTGGATGTCTGA+TGG 0.517822 3_4:+50549311 Msa0505180:five_prime_UTR
TTTCATATAGTCCTCATCAA+AGG 0.518881 3_4:-50551142 None:intergenic
GATGCTGATCCACTGCTCTC+GGG 0.519692 3_4:-50561271 None:intergenic
TGCATGTCTTCTGTCATAAG+AGG 0.520468 3_4:-50559450 None:intergenic
TGTCGGAGCACGGAAATTTG+TGG 0.522930 3_4:+50561362 Msa0505180:CDS
TCATCTGCTTCCCAATCTCC+AGG 0.523726 3_4:-50561244 None:intergenic
TCTCCAAGACTGGTTAGCTG+TGG 0.527194 3_4:-50564105 None:intergenic
TGTTCCGAAGCAGGAAGAGC+AGG 0.527290 3_4:-50561406 None:intergenic
TCGTGAACTGGAACAAATGC+TGG 0.532806 3_4:-50550373 None:intergenic
ATAAAACTTATGCATTTGGA+GGG 0.535174 3_4:+50550487 Msa0505180:five_prime_UTR
TAACAGAAAGCCTGAAGATA+CGG 0.537971 3_4:+50559209 Msa0505180:intron
GATTAATCAAACAAGTAGAA+AGG 0.539887 3_4:-50557270 None:intergenic
GATCCGTTAGGTGCCATCCT+AGG 0.542441 3_4:-50557241 None:intergenic
AGTTTGTTCGAGAGGTTAGG+TGG 0.546050 3_4:+50557194 Msa0505180:five_prime_UTR
ACTTACAGAATGTATATATG+TGG 0.546156 3_4:+50564260 Msa0505180:CDS
GACATCAAGTGGGACACAAT+GGG 0.546476 3_4:+50551212 Msa0505180:five_prime_UTR
ATCAAACACGCACCGTTCCC+AGG 0.548121 3_4:-50548872 None:intergenic
AAGCAATTGATGTGGTCGTA+AGG 0.548145 3_4:-50563489 None:intergenic
AGCATGGGGAATCTTCTCAA+TGG 0.550107 3_4:+50564137 Msa0505180:CDS
CGAAGTCTTATTTCCCTCAT+CGG 0.551491 3_4:-50556937 None:intergenic
TCTCTATTTGGATCAAGAAG+AGG 0.552889 3_4:-50561433 None:intergenic
GAAAGGTCGATTGATCCGTT+AGG 0.553610 3_4:-50557253 None:intergenic
TTGAAGGTTCTAAAGAGAGT+CGG 0.554334 3_4:+50552487 Msa0505180:five_prime_UTR
TTATGGAGAACTGAAACAGA+TGG 0.560318 3_4:+50563568 Msa0505180:CDS
GATTTCAAATTATCGGAACC+AGG 0.560814 3_4:-50552733 None:intergenic
TTAACTAGGAGAGGTTCAGC+TGG 0.562481 3_4:+50559261 Msa0505180:five_prime_UTR
TTAGGTGCCATCCTAGGTAA+TGG 0.562654 3_4:-50557235 None:intergenic
CACCTCATGAAGCTGAGAAG+TGG 0.562932 3_4:+50551995 Msa0505180:five_prime_UTR
GGTTCTAAAGAGAGTCGGGT+TGG 0.563765 3_4:+50552492 Msa0505180:five_prime_UTR
GTATTCTGGCAATTTGTACA+AGG 0.564368 3_4:+50549850 Msa0505180:five_prime_UTR
GTCACAACCATTACCTAGGA+TGG 0.564747 3_4:+50557228 Msa0505180:five_prime_UTR
TCTTCAGACTTAACTAGGAG+AGG 0.564818 3_4:+50559252 Msa0505180:five_prime_UTR
AGCTTGCAATATGCATTGAG+AGG 0.566158 3_4:+50557640 Msa0505180:intron
ATGGTATGTGACCTCAGTCA+TGG 0.568093 3_4:-50557721 None:intergenic
ACCGTTCCCAGGAAGAAGCA+AGG 0.568748 3_4:-50548861 None:intergenic
TCTGCTTTGAGGCCTTTACA+AGG 0.569006 3_4:+50563626 Msa0505180:CDS
CCTGTGGCAGCTGAAAATCC+TGG 0.569270 3_4:+50552715 Msa0505180:intron
GAAGATTATCAGGACTGTAT+CGG 0.570921 3_4:+50557678 Msa0505180:five_prime_UTR
GCGTCATCCTCCACCAACAC+CGG 0.572918 3_4:+50548643 Msa0505180:five_prime_UTR
CTTCTTGATCCAAATAGAGA+AGG 0.574853 3_4:+50561436 Msa0505180:CDS
ATGGATAGAGTTTGTTCGAG+AGG 0.575339 3_4:+50557186 Msa0505180:five_prime_UTR
GACCATCAGACATCCAAAGC+CGG 0.576876 3_4:-50549313 None:intergenic
AACTTTGTTCTAGGTAAAAG+GGG 0.577221 3_4:+50549814 Msa0505180:intron
TTGACAAGAAACAAGCGGTA+AGG 0.577648 3_4:+50564042 Msa0505180:CDS
TATATTGGAATTCAGAGCAT+GGG 0.581759 3_4:+50550412 Msa0505180:five_prime_UTR
ATGCAAGCTGTTGAAGCCAT+TGG 0.583161 3_4:+50559483 Msa0505180:five_prime_UTR
AGACATCAAGTGGGACACAA+TGG 0.587373 3_4:+50551211 Msa0505180:five_prime_UTR
TAAATTGCAGGAAGAAAGTG+TGG 0.587545 3_4:+50557833 Msa0505180:intron
GATTAATCAGAAACTTCAGA+TGG 0.588476 3_4:+50557285 Msa0505180:five_prime_UTR
CCGTTCCCAGGAAGAAGCAA+GGG 0.590595 3_4:-50548860 None:intergenic
CGGTGAAGGTATAACCATTG+AGG 0.591681 3_4:-50552755 None:intergenic
AAAATTTCTCTTGAGAGCCG+TGG 0.592922 3_4:-50563840 None:intergenic
CGATCATATCTGAGATTCGA+TGG 0.594175 3_4:+50548621 Msa0505180:five_prime_UTR
TGCCTTGAAAACTTACAGCA+TGG 0.601892 3_4:+50549892 Msa0505180:five_prime_UTR
GCTTACAAATGAATCACCAA+TGG 0.602069 3_4:-50559499 None:intergenic
TTGCAGGAAGAAAGTGTGGT+TGG 0.609382 3_4:+50557837 Msa0505180:intron
CAGAACACTCCCCTTTGATG+AGG 0.609705 3_4:+50551131 Msa0505180:five_prime_UTR
GATGATGATCCCGAGAGCAG+TGG 0.609855 3_4:+50561262 Msa0505180:CDS
ATTTGTTCAAGCAATTGATG+TGG 0.610015 3_4:-50563497 None:intergenic
TCGCTCCACGATAGAGTGAG+TGG 0.610435 3_4:+50564191 Msa0505180:CDS
CGTCATCAGTAGAATCAGGT+AGG 0.610831 3_4:-50548678 None:intergenic
ATCAACAAGAACATGCAACT+GGG 0.611174 3_4:-50552523 None:intergenic
TCTAAGAGAATGTCGGAGCA+CGG 0.611994 3_4:+50561352 Msa0505180:CDS
TCAACAACTTTATCCTACCA+TGG 0.615005 3_4:+50563601 Msa0505180:CDS
AGGTTTGAAGCAGATCGCAT+TGG 0.616256 3_4:+50550451 Msa0505180:five_prime_UTR
AGGCCTCAAAGCAGATGCCA+TGG 0.616368 3_4:-50563618 None:intergenic
GGGAACAAGCTTGAAAGAAG+AGG 0.617875 3_4:+50563896 Msa0505180:CDS
AACCACTTCTCAGCTTCATG+AGG 0.619960 3_4:-50551997 None:intergenic
TAAAACTTATGCATTTGGAG+GGG 0.620059 3_4:+50550488 Msa0505180:five_prime_UTR
CTTACTGGTGAGACATCAAG+TGG 0.628857 3_4:+50551201 Msa0505180:five_prime_UTR
ACTGAAGGCATACTCCACAT+TGG 0.630062 3_4:+50551059 Msa0505180:intron
CAAGACTGGTTAGCTGTGGG+AGG 0.632334 3_4:-50564101 None:intergenic
CAGAAGACATGCATGAAGAG+AGG 0.632667 3_4:+50559460 Msa0505180:five_prime_UTR
AGCACACGATCTCTAACAGT+CGG 0.633362 3_4:-50552775 None:intergenic
CGATCTCTAACAGTCGGTGA+AGG 0.634551 3_4:-50552769 None:intergenic
TTATATTGGAATTCAGAGCA+TGG 0.634913 3_4:+50550411 Msa0505180:five_prime_UTR
TCAATTGCTTGAACAAATGG+TGG 0.635113 3_4:+50563502 Msa0505180:CDS
ATGTCTTCTGTCATAAGAGG+TGG 0.637142 3_4:-50559447 None:intergenic
TTACCTAGGATGGCACCTAA+CGG 0.641363 3_4:+50557238 Msa0505180:five_prime_UTR
AAGAGTCACAACCATTACCT+AGG 0.642195 3_4:+50557224 Msa0505180:five_prime_UTR
CTCTTAGAAAGCTTCCCACG+TGG 0.649641 3_4:-50561337 None:intergenic
ACACACCGAAGTTGAAGACA+TGG 0.655155 3_4:+50548705 Msa0505180:five_prime_UTR
TGGTCACGAACCAATCCTCA+GGG 0.656438 3_4:+50564157 Msa0505180:CDS
GAAGCTTTCTAAGAGAATGT+CGG 0.656881 3_4:+50561345 Msa0505180:CDS
TTAGAAAGCTTCCCACGTGG+AGG 0.657047 3_4:-50561334 None:intergenic
CTCAAAGCAGATGCCATGGT+AGG 0.657425 3_4:-50563614 None:intergenic
ATTGCTCCTCAAAGTGCAAG+TGG 0.659519 3_4:+50550189 Msa0505180:five_prime_UTR
TGTAGTTCTTGATGCACCAG+AGG 0.663468 3_4:+50550212 Msa0505180:five_prime_UTR
GATTACCACTCACTCTATCG+TGG 0.664886 3_4:-50564196 None:intergenic
TGTGCAAAGAGTGACTCAAG+AGG 0.665633 3_4:-50556978 None:intergenic
GGAATTTGACAAGAAACAAG+CGG 0.666341 3_4:+50564037 Msa0505180:intron
AAGATAGTTGGCCTCCACGT+GGG 0.666641 3_4:+50561323 Msa0505180:CDS
TCTTGGCATCCAGATGACGC+AGG 0.676543 3_4:+50550007 Msa0505180:intron
TATGCATGCCCCGTACACAC+AGG 0.679486 3_4:+50559323 Msa0505180:five_prime_UTR
AAAGATAGTTGGCCTCCACG+TGG 0.680840 3_4:+50561322 Msa0505180:CDS
TCATATAGATTCCATGACTG+AGG 0.684894 3_4:+50557710 Msa0505180:five_prime_UTR
TGGAGAAACCTGTGTGTACG+GGG 0.686734 3_4:-50559331 None:intergenic
TCATATAGTCCTCATCAAAG+GGG 0.695091 3_4:-50551140 None:intergenic
AACAAGAACATGCAACTGGG+AGG 0.696166 3_4:-50552520 None:intergenic
ATGAACAGATAGATCCAATG+TGG 0.712050 3_4:-50551073 None:intergenic
TTTGGCAACTGCAATATACG+TGG 0.718773 3_4:+50557023 Msa0505180:five_prime_UTR
AATCACTATGCAGCTCGTAG+CGG 0.731948 3_4:+50564215 Msa0505180:CDS
CAACCGAAAGTGCAACACGT+AGG 0.757533 3_4:-50564295 None:intergenic
TTACTGGTGAGACATCAAGT+GGG 0.765914 3_4:+50551202 Msa0505180:five_prime_UTR
GCAAGCTTATACGAGCACCA+CGG 0.771138 3_4:+50563823 Msa0505180:CDS
GGTGGCTACTGCCTTCAGAG+CGG 0.783574 3_4:+50563520 Msa0505180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTGATTGTTTAAATT+CGG - chr3_4:50549705-50549724 None:intergenic 10.0%
!!! TATATTTTTTAAATCTATCT+TGG + chr3_4:50549990-50550009 Msa0505180:intron 10.0%
!! AATGAATTATTATATATTAC+TGG + chr3_4:50550756-50550775 Msa0505180:intron 10.0%
!! ATGAATTATTATATATTACT+GGG + chr3_4:50550757-50550776 Msa0505180:intron 10.0%
!! ATAATATAAAGAATTCAAAT+TGG - chr3_4:50552451-50552470 None:intergenic 10.0%
!!! TTATATTTTGTCTTTAATTT+TGG + chr3_4:50552838-50552857 Msa0505180:intron 10.0%
!!! TATATTTTGTCTTTAATTTT+GGG + chr3_4:50552839-50552858 Msa0505180:intron 10.0%
!!! AAGTGAAATATAAATTATTT+TGG + chr3_4:50552999-50553018 Msa0505180:intron 10.0%
!!! AAAATATATGTTTTACTTTT+TGG - chr3_4:50553034-50553053 None:intergenic 10.0%
!!! AAGTAAAACATATATTTTTT+TGG + chr3_4:50553036-50553055 Msa0505180:intron 10.0%
!! TATATTTAACCATATTATAT+TGG + chr3_4:50554383-50554402 Msa0505180:intron 10.0%
!! ATATTTAACCATATTATATT+GGG + chr3_4:50554384-50554403 Msa0505180:intron 10.0%
!!! AAAATAATTTTTTGTTATGT+GGG - chr3_4:50554505-50554524 None:intergenic 10.0%
!!! AAAAATAATTTTTTGTTATG+TGG - chr3_4:50554506-50554525 None:intergenic 10.0%
!!! AAAAATATTTTTTTGTTATG+TGG + chr3_4:50555139-50555158 Msa0505180:intron 10.0%
!!! AAAATATTTTTTTGTTATGT+GGG + chr3_4:50555140-50555159 Msa0505180:intron 10.0%
!! TCAATAAAATATTATACTAA+TGG - chr3_4:50555300-50555319 None:intergenic 10.0%
!!! ACATTTTCTAAAATTTATAT+TGG + chr3_4:50555447-50555466 Msa0505180:intron 10.0%
!!! CATTTTCTAAAATTTATATT+GGG + chr3_4:50555448-50555467 Msa0505180:intron 10.0%
!! AAATAATAAATAATAAAGAG+AGG + chr3_4:50556450-50556469 Msa0505180:intron 10.0%
!! ATATAATTAAAAGGATAATT+TGG + chr3_4:50556616-50556635 Msa0505180:intron 10.0%
!! TAATTAAAATGATATATTTC+AGG + chr3_4:50558929-50558948 Msa0505180:intron 10.0%
!! AAATATTAAAGTGAAATAAA+GGG - chr3_4:50560266-50560285 None:intergenic 10.0%
!! TAAATATTAAAGTGAAATAA+AGG - chr3_4:50560267-50560286 None:intergenic 10.0%
!!! CATATATCATATTTTAAATT+AGG + chr3_4:50560535-50560554 Msa0505180:intron 10.0%
!!! ATAGTAAAAGAATTTTTTAT+TGG - chr3_4:50562714-50562733 None:intergenic 10.0%
!!! CTATTGATTTTAAAATTTTA+AGG + chr3_4:50562730-50562749 Msa0505180:intron 10.0%
!!! TTAAAATTTTAAGGATTTTA+TGG + chr3_4:50562739-50562758 Msa0505180:intron 10.0%
!!! TTTTTTTTAAAGATTTGTAA+GGG - chr3_4:50562887-50562906 None:intergenic 10.0%
!!! TTTTTTTTTAAAGATTTGTA+AGG - chr3_4:50562888-50562907 None:intergenic 10.0%
!! AATTGAGAATATAAATATTA+GGG - chr3_4:50563444-50563463 None:intergenic 10.0%
!! AAATTGAGAATATAAATATT+AGG - chr3_4:50563445-50563464 None:intergenic 10.0%
!!! AATGATTATGAAACTTTTTT+TGG - chr3_4:50548541-50548560 None:intergenic 15.0%
!!! TAGTTAGTTCATATTTTTAT+AGG + chr3_4:50548945-50548964 Msa0505180:intron 15.0%
!!! TTAAATTACTTTAGTTTAGA+TGG + chr3_4:50549196-50549215 Msa0505180:intron 15.0%
!! ATAATAAAAAATTACCAGAA+GGG - chr3_4:50549937-50549956 None:intergenic 15.0%
!!! AATTTTTTATTATGGTTAGT+AGG + chr3_4:50549944-50549963 Msa0505180:intron 15.0%
!! TGAATTATTATATATTACTG+GGG + chr3_4:50550758-50550777 Msa0505180:intron 15.0%
!! AATCAATATTTAGAAAATAG+AGG + chr3_4:50551670-50551689 Msa0505180:intron 15.0%
!!! TTAGTATAACTATTCAATTT+TGG + chr3_4:50552662-50552681 Msa0505180:intron 15.0%
!! AATTAAAGACAAAATATAAG+AGG - chr3_4:50552837-50552856 None:intergenic 15.0%
!!! ATATAAATTATTTTGGTTTG+AGG + chr3_4:50553006-50553025 Msa0505180:intron 15.0%
!!! ATTTAAAATGAAAAATTCCT+GGG - chr3_4:50553277-50553296 None:intergenic 15.0%
!!! AATTTAAAATGAAAAATTCC+TGG - chr3_4:50553278-50553297 None:intergenic 15.0%
!! GAAAAAGGATTAATTATTTA+TGG - chr3_4:50553302-50553321 None:intergenic 15.0%
!! TGAAAAAATGTTTATAAATG+TGG - chr3_4:50553688-50553707 None:intergenic 15.0%
!!! AAAAGTAAATTTTTCTCATA+AGG - chr3_4:50554884-50554903 None:intergenic 15.0%
!! GTAGAAAAGATAATATAATA+GGG - chr3_4:50555262-50555281 None:intergenic 15.0%
!! TGTAGAAAAGATAATATAAT+AGG - chr3_4:50555263-50555282 None:intergenic 15.0%
!!! GTTTCAAGTTTAATTTATTA+TGG - chr3_4:50556125-50556144 None:intergenic 15.0%
!!! TAATTTATTTTTTTCATGCA+CGG + chr3_4:50557308-50557327 Msa0505180:intron 15.0%
!! ATTTCTATATTATTGTAAAC+TGG + chr3_4:50557803-50557822 Msa0505180:intron 15.0%
!! TATAGTTTCTCATAAAATAT+GGG + chr3_4:50558074-50558093 Msa0505180:intron 15.0%
!! ATAAAAATGAACAAAAGAAT+GGG - chr3_4:50558841-50558860 None:intergenic 15.0%
!! AAGATTATCTCATTAAAAAA+AGG - chr3_4:50560664-50560683 None:intergenic 15.0%
!! TTTCTAATATTTAATGAGTA+TGG - chr3_4:50560832-50560851 None:intergenic 15.0%
!!! TTATGTATGTAAATTTTTGT+AGG + chr3_4:50560876-50560895 Msa0505180:intron 15.0%
!!! TAAAGTACAAATAGTTTTTA+AGG + chr3_4:50560911-50560930 Msa0505180:intron 15.0%
!!! AAAGTACAAATAGTTTTTAA+GGG + chr3_4:50560912-50560931 Msa0505180:intron 15.0%
!! ATTTATATGGTATAACAATA+TGG - chr3_4:50561522-50561541 None:intergenic 15.0%
!! ATATAAATTTCAAACAATGA+GGG + chr3_4:50561534-50561553 Msa0505180:intron 15.0%
!!! GAGAAACTTAAATTATTTTA+AGG - chr3_4:50561758-50561777 None:intergenic 15.0%
!!! AATCAAATTAAATTTTACCA+TGG - chr3_4:50562037-50562056 None:intergenic 15.0%
!!! TTAATTTGATTATGAACTTA+TGG + chr3_4:50562046-50562065 Msa0505180:intron 15.0%
!!! ATGGGATTTTAAAATTTTAA+AGG + chr3_4:50562589-50562608 Msa0505180:intron 15.0%
!!! ATGGATTTTATAAGATTTTA+AGG + chr3_4:50562758-50562777 Msa0505180:intron 15.0%
!!! TGGATTTTATAAGATTTTAA+GGG + chr3_4:50562759-50562778 Msa0505180:intron 15.0%
!! TAACAAATAAAAAATGTGTA+TGG - chr3_4:50562814-50562833 None:intergenic 15.0%
!!! TTTAATAAATTGGATTTTGA+TGG - chr3_4:50563199-50563218 None:intergenic 15.0%
!! ATTGAGAATATAAATATTAG+GGG - chr3_4:50563443-50563462 None:intergenic 15.0%
!!! ATTAATTTGATGTTGTTTAT+TGG + chr3_4:50564327-50564346 Msa0505180:exon 15.0%
!!! TCATGGTTTTAATAATTTTA+AGG + chr3_4:50564358-50564377 Msa0505180:three_prime_UTR 15.0%
!!! TGTTCTTTAGTTAGTTTATT+CGG + chr3_4:50549035-50549054 Msa0505180:intron 20.0%
!! TTGATTAAATAAGTTCAGTT+TGG + chr3_4:50549075-50549094 Msa0505180:intron 20.0%
!!! GTTGTTAATTGTTTTTTTGT+AGG + chr3_4:50549264-50549283 Msa0505180:intron 20.0%
!!! ATGCTTACCATTAAATTTTT+TGG - chr3_4:50549338-50549357 None:intergenic 20.0%
!! AGTACAAAATGTTATCAAAT+AGG + chr3_4:50549647-50549666 Msa0505180:intron 20.0%
!!! AATTTTATGCCATTTCTTTT+TGG + chr3_4:50549772-50549791 Msa0505180:intron 20.0%
!! CATAATAAAAAATTACCAGA+AGG - chr3_4:50549938-50549957 None:intergenic 20.0%
!!! CTTCTGGTAATTTTTTATTA+TGG + chr3_4:50549936-50549955 Msa0505180:intron 20.0%
!!! AAATTTCATTGATTTCACTA+AGG + chr3_4:50550130-50550149 Msa0505180:intron 20.0%
!!! TTACTATTTTCTCATAACTT+TGG + chr3_4:50550335-50550354 Msa0505180:intron 20.0%
!!! TTCATTTAATTTTATGACGT+TGG + chr3_4:50550571-50550590 Msa0505180:intron 20.0%
!!! ATTTTTCCTTTTCTATATTC+TGG + chr3_4:50550871-50550890 Msa0505180:intron 20.0%
!! AAAGGTAATTGTTATGATAA+AGG + chr3_4:50551282-50551301 Msa0505180:intron 20.0%
!! CAACTTATCCATAAATTAAA+TGG - chr3_4:50551893-50551912 None:intergenic 20.0%
!! ATAACACTTGTAAATTGTAA+TGG + chr3_4:50552255-50552274 Msa0505180:intron 20.0%
!! TTAAATCGTGATATTATACA+AGG - chr3_4:50552349-50552368 None:intergenic 20.0%
!!! AAAAAGCATCAATAGTTTAA+TGG + chr3_4:50552368-50552387 Msa0505180:intron 20.0%
!!! TTTATAGAAGATTTTGTTTC+AGG + chr3_4:50552573-50552592 Msa0505180:five_prime_UTR 20.0%
!! ATACTAACTAAGAAACATAA+AGG - chr3_4:50552649-50552668 None:intergenic 20.0%
!! CAGATTTATTGAACATATAT+AGG - chr3_4:50552937-50552956 None:intergenic 20.0%
!! TTAATTCAATCCTACAAAAT+TGG + chr3_4:50553154-50553173 Msa0505180:intron 20.0%
!! TATTTACTTGAAACAGAAAA+AGG - chr3_4:50553317-50553336 None:intergenic 20.0%
!!! TGTTTCAAGTAAATACTATA+AGG + chr3_4:50553322-50553341 Msa0505180:intron 20.0%
!! TAAAAAATACCTATGTTCTT+AGG - chr3_4:50553596-50553615 None:intergenic 20.0%
!!! AAGAAGTATTTATAAGTAGT+AGG - chr3_4:50553904-50553923 None:intergenic 20.0%
!! TACTTATAAATACTTCTTTC+AGG + chr3_4:50553906-50553925 Msa0505180:intron 20.0%
!! TTTCCAATACAAATAAAAGA+GGG + chr3_4:50554079-50554098 Msa0505180:intron 20.0%
!!! TTTAAGGTTTTATGATATGA+TGG - chr3_4:50554719-50554738 None:intergenic 20.0%
!!! AAATGGGTTTATAAGATTTA+AGG - chr3_4:50554735-50554754 None:intergenic 20.0%
!!! CATATTCAATTTTTTCTTCA+CGG + chr3_4:50555039-50555058 Msa0505180:intron 20.0%
!! ACATGTAAACAAAAATAAAC+TGG + chr3_4:50555617-50555636 Msa0505180:intron 20.0%
!! CATGTAAACAAAAATAAACT+GGG + chr3_4:50555618-50555637 Msa0505180:intron 20.0%
!!! TTTTAATGTGATAAAGGAAA+GGG - chr3_4:50555667-50555686 None:intergenic 20.0%
!!! CTTATGTTTTAATGTGATAA+AGG - chr3_4:50555673-50555692 None:intergenic 20.0%
!! CTTTATCACATTAAAACATA+AGG + chr3_4:50555671-50555690 Msa0505180:intron 20.0%
!! AAACTAAAATCAGAATTGAA+GGG + chr3_4:50556292-50556311 Msa0505180:intron 20.0%
!!! AATGTGAATTGATTTATGTT+TGG - chr3_4:50556723-50556742 None:intergenic 20.0%
!!! AATTTTGTTTACATTCTCTT+TGG + chr3_4:50557000-50557019 Msa0505180:five_prime_UTR 20.0%
!! CTAAAATCAAAAGGAAAAAA+TGG - chr3_4:50557743-50557762 None:intergenic 20.0%
!! CTATAGTTTCTCATAAAATA+TGG + chr3_4:50558073-50558092 Msa0505180:intron 20.0%
!! AATTAGTGGTTATAAATGAT+GGG - chr3_4:50558148-50558167 None:intergenic 20.0%
!! AAATTAGTGGTTATAAATGA+TGG - chr3_4:50558149-50558168 None:intergenic 20.0%
!! ATCATTTATAACCACTAATT+TGG + chr3_4:50558148-50558167 Msa0505180:intron 20.0%
!! AACTTTCAATTCTCTAATAT+GGG + chr3_4:50558357-50558376 Msa0505180:intron 20.0%
!! AATAAATTTGGTTAAATTCG+AGG - chr3_4:50558680-50558699 None:intergenic 20.0%
!! TAAAAATGAACAAAAGAATG+GGG - chr3_4:50558840-50558859 None:intergenic 20.0%
!! GATAAAAATGAACAAAAGAA+TGG - chr3_4:50558842-50558861 None:intergenic 20.0%
!! AAATTTATAGAGCAGAATTT+AGG + chr3_4:50558862-50558881 Msa0505180:intron 20.0%
!!! AAGATTTTTTGTCTTTATAC+AGG - chr3_4:50559236-50559255 None:intergenic 20.0%
!! TTTAATATCAATTAACTGCT+TGG - chr3_4:50559660-50559679 None:intergenic 20.0%
!! GCAGTTAATTGATATTAAAT+CGG + chr3_4:50559661-50559680 Msa0505180:intron 20.0%
!! ATTACAAAATGTTAACTCAA+TGG - chr3_4:50559871-50559890 None:intergenic 20.0%
!! ACATAAACATAACACTATAT+AGG - chr3_4:50560237-50560256 None:intergenic 20.0%
!! ATGATCAACCAAATTAAAAT+GGG - chr3_4:50560448-50560467 None:intergenic 20.0%
!! AATGATCAACCAAATTAAAA+TGG - chr3_4:50560449-50560468 None:intergenic 20.0%
!! AGAAAAATTCTGTAGAAAAA+AGG - chr3_4:50560567-50560586 None:intergenic 20.0%
!!! TATAAACTATGAAGCATTAA+GGG - chr3_4:50561092-50561111 None:intergenic 20.0%
!!! ATTATAGTATTGAACAATGT+TGG - chr3_4:50561122-50561141 None:intergenic 20.0%
!!! AAAATAAGTTGAAAGATAGT+TGG + chr3_4:50561311-50561330 Msa0505180:CDS 20.0%
!!! CTCATTGTTTGAAATTTATA+TGG - chr3_4:50561535-50561554 None:intergenic 20.0%
!! CATATAAATTTCAAACAATG+AGG + chr3_4:50561533-50561552 Msa0505180:intron 20.0%
!! ATGAATTTAACTGCTATAAT+TGG - chr3_4:50561573-50561592 None:intergenic 20.0%
!! AATTATAGCAGTTAAATTCA+TGG + chr3_4:50561572-50561591 Msa0505180:intron 20.0%
!! AATTCATGGTTATTAAATCA+AGG + chr3_4:50561586-50561605 Msa0505180:intron 20.0%
!! ATTCTATTGAAACAATACAT+AGG - chr3_4:50561860-50561879 None:intergenic 20.0%
!!! TTATACACTCAAGATTTTAA+TGG + chr3_4:50562528-50562547 Msa0505180:intron 20.0%
!!! TAAAGGATTCAATGAATTTT+AGG + chr3_4:50562606-50562625 Msa0505180:intron 20.0%
!!! AAAGGATTCAATGAATTTTA+GGG + chr3_4:50562607-50562626 Msa0505180:intron 20.0%
!!! TATGTACAATTGAATTTTGT+GGG - chr3_4:50562848-50562867 None:intergenic 20.0%
!!! ATATGTACAATTGAATTTTG+TGG - chr3_4:50562849-50562868 None:intergenic 20.0%
!! TAATTTCAAACACAAAATGA+GGG - chr3_4:50562927-50562946 None:intergenic 20.0%
!! TTAATTATGAAAAAGTCTTG+TGG - chr3_4:50563379-50563398 None:intergenic 20.0%
!! TTGAGAATATAAATATTAGG+GGG - chr3_4:50563442-50563461 None:intergenic 20.0%
!!! ATTTATATTCTCAATTTTCC+AGG + chr3_4:50563448-50563467 Msa0505180:intron 20.0%
!!! AACTTTTATATTCCAACAAT+GGG + chr3_4:50563876-50563895 Msa0505180:CDS 20.0%
! AATCAGAATCATAATTCGAT+TGG - chr3_4:50548762-50548781 None:intergenic 25.0%
! TTAAATAAGTTCAGTTTGGA+TGG + chr3_4:50549079-50549098 Msa0505180:intron 25.0%
! CAGAATACAACAATATGAAT+CGG - chr3_4:50549164-50549183 None:intergenic 25.0%
!!! TAGGTTTATTTCTGAAATAG+AGG + chr3_4:50549283-50549302 Msa0505180:intron 25.0%
! TGATGGTCCAAAAAATTTAA+TGG + chr3_4:50549328-50549347 Msa0505180:five_prime_UTR 25.0%
! AATTTCGTATATTGAAATGC+TGG + chr3_4:50549370-50549389 Msa0505180:intron 25.0%
! CATATTTGTAAATTGTGATG+CGG + chr3_4:50549423-50549442 Msa0505180:intron 25.0%
!! TAACTTTGTTCTAGGTAAAA+GGG + chr3_4:50549813-50549832 Msa0505180:intron 25.0%
! TCCAATAAAACTTATGCATT+TGG + chr3_4:50550483-50550502 Msa0505180:five_prime_UTR 25.0%
!!! TCCAAATGCATAAGTTTTAT+TGG - chr3_4:50550487-50550506 None:intergenic 25.0%
! AATAAAACTTATGCATTTGG+AGG + chr3_4:50550486-50550505 Msa0505180:five_prime_UTR 25.0%
! ATAAAACTTATGCATTTGGA+GGG + chr3_4:50550487-50550506 Msa0505180:five_prime_UTR 25.0%
! TAAATTAAACAACAAGAGAC+AGG - chr3_4:50550548-50550567 None:intergenic 25.0%
! TTGTAAAAGAAAGCAAAGTA+TGG - chr3_4:50550642-50550661 None:intergenic 25.0%
!!! GCAACAGTTTTCTATTTTTT+TGG + chr3_4:50550794-50550813 Msa0505180:intron 25.0%
! AGAATCCAAGAAACATATTT+GGG - chr3_4:50550906-50550925 None:intergenic 25.0%
! AAGAATCCAAGAAACATATT+TGG - chr3_4:50550907-50550926 None:intergenic 25.0%
!!! ATAAATTATTAGGTTGAGGT+AGG - chr3_4:50550949-50550968 None:intergenic 25.0%
!! TAGCATAAATTATTAGGTTG+AGG - chr3_4:50550953-50550972 None:intergenic 25.0%
! ATCAAATGGAAATTAGTTAC+AGG - chr3_4:50551039-50551058 None:intergenic 25.0%
! TAATTTCCATTTGATACTGA+AGG + chr3_4:50551044-50551063 Msa0505180:intron 25.0%
! AAATCTGAAGAAAATCTTAC+TGG + chr3_4:50551186-50551205 Msa0505180:five_prime_UTR 25.0%
! TCATAACAATTACCTTTAAC+AGG - chr3_4:50551279-50551298 None:intergenic 25.0%
! TCACAAAATACACATTCTAT+TGG - chr3_4:50551365-50551384 None:intergenic 25.0%
! TTATGAAGTTATTGAGGAAA+GGG + chr3_4:50551388-50551407 Msa0505180:intron 25.0%
!! TTTGTCATACAAAGCATTAA+GGG - chr3_4:50551437-50551456 None:intergenic 25.0%
! GCATGGATGAAAAATAAAAT+AGG - chr3_4:50551483-50551502 None:intergenic 25.0%
!! AAAGAGACAAACAAAAGTAT+AGG - chr3_4:50551754-50551773 None:intergenic 25.0%
!! TTTAATACTTGGGACATTTT+TGG + chr3_4:50551784-50551803 Msa0505180:intron 25.0%
! TCCATAAATTAAATGGAACT+GGG - chr3_4:50551886-50551905 None:intergenic 25.0%
! ATCCATAAATTAAATGGAAC+TGG - chr3_4:50551887-50551906 None:intergenic 25.0%
! CTGATGAAAATGAAATTTCT+GGG - chr3_4:50552218-50552237 None:intergenic 25.0%
! ACTGATGAAAATGAAATTTC+TGG - chr3_4:50552219-50552238 None:intergenic 25.0%
! ACTTGTAAATTGTAATGGTT+AGG + chr3_4:50552260-50552279 Msa0505180:intron 25.0%
!!! TCTTTAAAAGCTTTTACTGA+GGG + chr3_4:50552322-50552341 Msa0505180:intron 25.0%
! AAAGAATTCAAATTGGTTAC+CGG - chr3_4:50552444-50552463 None:intergenic 25.0%
!!! TTTCAGGTTCAAATTTGTTT+TGG + chr3_4:50552589-50552608 Msa0505180:intron 25.0%
! CATTGAGGATTTCAAATTAT+CGG - chr3_4:50552743-50552762 None:intergenic 25.0%
!!! ATTGAAGGTACATAGATTTT+CGG + chr3_4:50552811-50552830 Msa0505180:intron 25.0%
! TTATATTTCACTTCACTCTT+TGG - chr3_4:50552992-50553011 None:intergenic 25.0%
!!! ACATATATTTTTTTGGACAG+TGG + chr3_4:50553043-50553062 Msa0505180:intron 25.0%
!!! TTGGTTACTCTTTAGAATTT+AGG + chr3_4:50553125-50553144 Msa0505180:intron 25.0%
! TATCTATTTCCTAAGAACAT+AGG + chr3_4:50553584-50553603 Msa0505180:intron 25.0%
! GAGATTACAAATATATAGCT+GGG - chr3_4:50553634-50553653 None:intergenic 25.0%
! AGAGATTACAAATATATAGC+TGG - chr3_4:50553635-50553654 None:intergenic 25.0%
! CTTTCCAATACAAATAAAAG+AGG + chr3_4:50554078-50554097 Msa0505180:intron 25.0%
! TTCCAATACAAATAAAAGAG+GGG + chr3_4:50554080-50554099 Msa0505180:intron 25.0%
! TACAGATATTAGTGAAACTT+AGG + chr3_4:50554121-50554140 Msa0505180:intron 25.0%
!!! TGGTTTTATATTTGATGGTT+AGG + chr3_4:50554152-50554171 Msa0505180:intron 25.0%
! TAAAAATAGGGACCATATTA+GGG - chr3_4:50555233-50555252 None:intergenic 25.0%
! ATAAAAATAGGGACCATATT+AGG - chr3_4:50554414-50554433 None:intergenic 25.0%
!!! TAATATGGTCCCTATTTTTA+TGG + chr3_4:50554413-50554432 Msa0505180:intron 25.0%
! CACAAACAAAAAATGTTTCA+TGG + chr3_4:50554478-50554497 Msa0505180:intron 25.0%
!!! GAATTTTTGGCTTATACTAA+GGG - chr3_4:50554559-50554578 None:intergenic 25.0%
!!! AGAATTTTTGGCTTATACTA+AGG - chr3_4:50554560-50554579 None:intergenic 25.0%
! GATAAAGGAGGAAAATAAAT+GGG - chr3_4:50554751-50554770 None:intergenic 25.0%
! AGATAAAGGAGGAAAATAAA+TGG - chr3_4:50554752-50554771 None:intergenic 25.0%
! GAAAAAATTGAATATGGATG+AGG - chr3_4:50555035-50555054 None:intergenic 25.0%
! CGTGAAGAAAAAATTGAATA+TGG - chr3_4:50555041-50555060 None:intergenic 25.0%
! CACAAAAAAAAATTGTTGCA+TGG - chr3_4:50555167-50555186 None:intergenic 25.0%
!!! AATATGGTCCCTATTTTTAA+GGG - chr3_4:50555232-50555251 None:intergenic 25.0%
!!! TAATATGGTCCCTATTTTTA+AGG - chr3_4:50554413-50554432 None:intergenic 25.0%
! TTAAAAATAGGGACCATATT+AGG + chr3_4:50555232-50555251 Msa0505180:intron 25.0%
! TAAAAATAGGGACCATATTA+GGG + chr3_4:50555233-50555252 Msa0505180:intron 25.0%
!!! AATTTTAGAAAATGTCACAC+AGG - chr3_4:50555442-50555461 None:intergenic 25.0%
!! TGGTATTCTATTTAAGTTAG+AGG - chr3_4:50555480-50555499 None:intergenic 25.0%
!! ACTATTTTCTTGTTCTTGAA+AGG + chr3_4:50555576-50555595 Msa0505180:intron 25.0%
!!! GTTTTAATGTGATAAAGGAA+AGG - chr3_4:50555668-50555687 None:intergenic 25.0%
! TTCAAAATTATTCACTAAGC+AGG - chr3_4:50555708-50555727 None:intergenic 25.0%
!! TTTTGAATTTCATGTTTCCT+TGG + chr3_4:50555721-50555740 Msa0505180:intron 25.0%
! TGAAGAAGAAAGATGTTTAT+GGG - chr3_4:50556007-50556026 None:intergenic 25.0%
! ATGAAGAAGAAAGATGTTTA+TGG - chr3_4:50556008-50556027 None:intergenic 25.0%
! ATAACAGATCTGTAATTAGA+GGG - chr3_4:50556060-50556079 None:intergenic 25.0%
! TATAACAGATCTGTAATTAG+AGG - chr3_4:50556061-50556080 None:intergenic 25.0%
! TATTGGAGAAAAATGAAAGT+AGG + chr3_4:50556192-50556211 Msa0505180:intron 25.0%
! CAAACTAAAATCAGAATTGA+AGG + chr3_4:50556291-50556310 Msa0505180:intron 25.0%
!! AATTTGTTCAATTTCATGGA+TGG - chr3_4:50556332-50556351 None:intergenic 25.0%
!! TCTCAATTTGTTCAATTTCA+TGG - chr3_4:50556336-50556355 None:intergenic 25.0%
! TGAAATTGAACAAATTGAGA+TGG + chr3_4:50556336-50556355 Msa0505180:intron 25.0%
!!! GATTTTGAGAGAATTGATTT+TGG - chr3_4:50556760-50556779 None:intergenic 25.0%
!!! ATATTTTGCTGGTTAGAATT+CGG + chr3_4:50556844-50556863 Msa0505180:intron 25.0%
! GATTAATCAAACAAGTAGAA+AGG - chr3_4:50557273-50557292 None:intergenic 25.0%
!!! TTTTCTAGTAGCTAAAAAGT+GGG - chr3_4:50557434-50557453 None:intergenic 25.0%
! CTGTAGAATACATAAAGATA+AGG + chr3_4:50557583-50557602 Msa0505180:intron 25.0%
!!! TTCCTTTTGATTTTAGTGAT+TGG + chr3_4:50557747-50557766 Msa0505180:intron 25.0%
!!! TCCTTTTGATTTTAGTGATT+GGG + chr3_4:50557748-50557767 Msa0505180:intron 25.0%
! TAGTAATATGACCAAATTAG+TGG - chr3_4:50558162-50558181 None:intergenic 25.0%
! GAACTTTCAATTCTCTAATA+TGG + chr3_4:50558356-50558375 Msa0505180:intron 25.0%
! ACTAGGAAACAAAAATGTAA+TGG + chr3_4:50558398-50558417 Msa0505180:intron 25.0%
! ATTTCTATTATCACTCAGTA+AGG - chr3_4:50558433-50558452 None:intergenic 25.0%
! AATATTGAGAAGGAAATTTG+GGG - chr3_4:50558512-50558531 None:intergenic 25.0%
! GAATATTGAGAAGGAAATTT+GGG - chr3_4:50558513-50558532 None:intergenic 25.0%
! TGAATATTGAGAAGGAAATT+TGG - chr3_4:50558514-50558533 None:intergenic 25.0%
!!! CCATATTTTAATATGGTGAT+AGG - chr3_4:50558598-50558617 None:intergenic 25.0%
! CCTATCACCATATTAAAATA+TGG + chr3_4:50558595-50558614 Msa0505180:intron 25.0%
! ACCATATTAAAATATGGACT+GGG + chr3_4:50558601-50558620 Msa0505180:intron 25.0%
!! TGAATATATTGTTGCTTCTT+TGG + chr3_4:50558814-50558833 Msa0505180:intron 25.0%
! AATTTGGCAAAGGAAATAAA+AGG - chr3_4:50558988-50559007 None:intergenic 25.0%
!!! ATTTTTCGAAAATTTGGCAA+AGG - chr3_4:50558998-50559017 None:intergenic 25.0%
!!! ACAGTGATTTTTCGAAAATT+TGG - chr3_4:50559004-50559023 None:intergenic 25.0%
! AAAAATCTTCAGACTTAACT+AGG + chr3_4:50559247-50559266 Msa0505180:five_prime_UTR 25.0%
! TAGGTACATAAGAAATTCTT+CGG - chr3_4:50560218-50560237 None:intergenic 25.0%
! AAAATGTTCAAGGATAAAGA+AGG - chr3_4:50560414-50560433 None:intergenic 25.0%
! TCTCATTAAAAAAAGGAACT+AGG - chr3_4:50560657-50560676 None:intergenic 25.0%
!! CTATAAACTATGAAGCATTA+AGG - chr3_4:50561093-50561112 None:intergenic 25.0%
! TATATGTGACAGACAAAAAA+TGG + chr3_4:50561141-50561160 Msa0505180:intron 25.0%
!!! CTACTTTTGAAGACTTTATT+CGG + chr3_4:50561212-50561231 Msa0505180:CDS 25.0%
! TTATTCACGATAAGGAAAAA+AGG - chr3_4:50561633-50561652 None:intergenic 25.0%
!!! AAGTCTTGTTATGAATTGTA+AGG + chr3_4:50561651-50561670 Msa0505180:intron 25.0%
! CAAAGTTGTCAAAAAAAAAG+TGG + chr3_4:50561820-50561839 Msa0505180:intron 25.0%
! AGCATTCATCATAATCAATT+GGG + chr3_4:50561905-50561924 Msa0505180:intron 25.0%
! TATCCATGTATTTGTATAAG+AGG + chr3_4:50562200-50562219 Msa0505180:intron 25.0%
! AATCCTCTTATACAAATACA+TGG - chr3_4:50562206-50562225 None:intergenic 25.0%
! GTGGTTAGAAATATTAAGAA+AGG + chr3_4:50562277-50562296 Msa0505180:intron 25.0%
!! AGGATTTCAAAGGATTTTAT+GGG + chr3_4:50562571-50562590 Msa0505180:intron 25.0%
!! AAGGATTCAATGAATTTTAG+GGG + chr3_4:50562608-50562627 Msa0505180:intron 25.0%
! CTAATTTCAAACACAAAATG+AGG - chr3_4:50562928-50562947 None:intergenic 25.0%
! ATGAAAAGATGAGATTTCTT+GGG - chr3_4:50563130-50563149 None:intergenic 25.0%
! CGAAGGATTGTTTAATAAAT+TGG - chr3_4:50563209-50563228 None:intergenic 25.0%
! CAAAATCATTCAAATTTCGA+AGG - chr3_4:50563226-50563245 None:intergenic 25.0%
! ATCACTTAAAAAAAGTCTCA+TGG - chr3_4:50563253-50563272 None:intergenic 25.0%
!!! GTCATTTTAAAAAAGTCTTG+AGG - chr3_4:50563295-50563314 None:intergenic 25.0%
! AATAACTAGTTACCTTGTAA+AGG - chr3_4:50563641-50563660 None:intergenic 25.0%
!! CAACTTTTATATTCCAACAA+TGG + chr3_4:50563875-50563894 Msa0505180:CDS 25.0%
! TGAAATCCATGTCATTAAAA+TGG - chr3_4:50564000-50564019 None:intergenic 25.0%
!! ATGGATTTCATCTATCTTTT+TGG + chr3_4:50564010-50564029 Msa0505180:intron 25.0%
!!! TTCATCTATCTTTTTGGTAT+AGG + chr3_4:50564016-50564035 Msa0505180:intron 25.0%
! ACTTACAGAATGTATATATG+TGG + chr3_4:50564260-50564279 Msa0505180:CDS 25.0%
!! TAGGTTTGTTTCTGAAATAG+AGG + chr3_4:50548964-50548983 Msa0505180:intron 30.0%
ACTGCAAATTGAGAAAATCA+CGG - chr3_4:50549011-50549030 None:intergenic 30.0%
!!! TGCTTCACTGTTTTTAAGTA+TGG + chr3_4:50549464-50549483 Msa0505180:intron 30.0%
AATTTCGGTTTCTTCGAATT+CGG - chr3_4:50549608-50549627 None:intergenic 30.0%
AGTGTACTATGCAACAATTT+CGG - chr3_4:50549623-50549642 None:intergenic 30.0%
TTATCAAATAGGCGCTATAA+TGG + chr3_4:50549658-50549677 Msa0505180:intron 30.0%
ATGTTGTCAATTGCAAATTG+CGG - chr3_4:50549730-50549749 None:intergenic 30.0%
CAATTTGCAATTGACAACAT+TGG + chr3_4:50549730-50549749 Msa0505180:intron 30.0%
! CATTTCTTTTTGGACTTGAA+CGG + chr3_4:50549782-50549801 Msa0505180:intron 30.0%
TTTACCTAGAACAAAGTTAC+AGG - chr3_4:50549812-50549831 None:intergenic 30.0%
! GTAACTTTGTTCTAGGTAAA+AGG + chr3_4:50549812-50549831 Msa0505180:intron 30.0%
! AACTTTGTTCTAGGTAAAAG+GGG + chr3_4:50549814-50549833 Msa0505180:intron 30.0%
TAAAAAATTACCAGAAGGGT+TGG - chr3_4:50549933-50549952 None:intergenic 30.0%
TTATTATGGTTAGTAGGTTG+AGG + chr3_4:50549950-50549969 Msa0505180:intron 30.0%
AAATCCAAATTCCAATTTGC+AGG - chr3_4:50550037-50550056 None:intergenic 30.0%
!! TTTCGGTGTAAAGGAATTTT+TGG + chr3_4:50550075-50550094 Msa0505180:five_prime_UTR 30.0%
!!! GTGTAAAGGAATTTTTGGTA+TGG + chr3_4:50550080-50550099 Msa0505180:intron 30.0%
CTAATGTCATGTATGTCATT+AGG + chr3_4:50550164-50550183 Msa0505180:intron 30.0%
TAACTATTGCTCATTGTTTG+TGG + chr3_4:50550285-50550304 Msa0505180:intron 30.0%
TTATATTGGAATTCAGAGCA+TGG + chr3_4:50550411-50550430 Msa0505180:five_prime_UTR 30.0%
TATATTGGAATTCAGAGCAT+GGG + chr3_4:50550412-50550431 Msa0505180:five_prime_UTR 30.0%
TAAAACTTATGCATTTGGAG+GGG + chr3_4:50550488-50550507 Msa0505180:five_prime_UTR 30.0%
ATGGAAACATAAAGCAACAA+GGG - chr3_4:50550623-50550642 None:intergenic 30.0%
TATGGAAACATAAAGCAACA+AGG - chr3_4:50550624-50550643 None:intergenic 30.0%
CAATAGTGCTATGATACAAT+TGG + chr3_4:50550659-50550678 Msa0505180:intron 30.0%
CTTGAGATGAAATAAATACG+TGG + chr3_4:50550726-50550745 Msa0505180:intron 30.0%
CTTAAAGAATACAGAGATCT+CGG - chr3_4:50550829-50550848 None:intergenic 30.0%
AGTAAGCCAGAATATAGAAA+AGG - chr3_4:50550880-50550899 None:intergenic 30.0%
CTTTACCCAAATATGTTTCT+TGG + chr3_4:50550898-50550917 Msa0505180:intron 30.0%
!! TGGCTCTAGCATAAATTATT+AGG - chr3_4:50550959-50550978 None:intergenic 30.0%
TAATAATTTATGCTAGAGCC+AGG + chr3_4:50550958-50550977 Msa0505180:intron 30.0%
! ATGTTAGCTTCATTGCAATT+CGG - chr3_4:50551110-50551129 None:intergenic 30.0%
TTCATATAGTCCTCATCAAA+GGG - chr3_4:50551144-50551163 None:intergenic 30.0%
TTTCATATAGTCCTCATCAA+AGG - chr3_4:50551145-50551164 None:intergenic 30.0%
TGAGTGTTATGAAGTTATTG+AGG + chr3_4:50551382-50551401 Msa0505180:intron 30.0%
GTTATGAAGTTATTGAGGAA+AGG + chr3_4:50551387-50551406 Msa0505180:intron 30.0%
! TTGTCATACAAAGCATTAAG+GGG - chr3_4:50551436-50551455 None:intergenic 30.0%
! GTTTGTCATACAAAGCATTA+AGG - chr3_4:50551438-50551457 None:intergenic 30.0%
! TTCTTTGGATTTTGTCAATG+AGG + chr3_4:50551625-50551644 Msa0505180:intron 30.0%
! ATTTTGTCAATGAGGAACTA+AGG + chr3_4:50551633-50551652 Msa0505180:intron 30.0%
AATTGAACTCTGTTTGAAAG+AGG - chr3_4:50551731-50551750 None:intergenic 30.0%
!! TTAGAGCCTTGTTTAATACT+TGG + chr3_4:50551773-50551792 Msa0505180:intron 30.0%
!! TAGAGCCTTGTTTAATACTT+GGG + chr3_4:50551774-50551793 Msa0505180:intron 30.0%
AATGTCCCAAGTATTAAACA+AGG - chr3_4:50551782-50551801 None:intergenic 30.0%
!! GTTTTGAACTGATCACAATA+TGG + chr3_4:50551920-50551939 Msa0505180:five_prime_UTR 30.0%
!!! TGTTTGGTTTTGATTCTACA+GGG - chr3_4:50552066-50552085 None:intergenic 30.0%
!!! ATGTTTGGTTTTGATTCTAC+AGG - chr3_4:50552067-50552086 None:intergenic 30.0%
TAATAATCAGAGTCAGTATG+TGG + chr3_4:50552150-50552169 Msa0505180:intron 30.0%
TGTAAATTGTAATGGTTAGG+TGG + chr3_4:50552263-50552282 Msa0505180:intron 30.0%
GTAAATTGTAATGGTTAGGT+GGG + chr3_4:50552264-50552283 Msa0505180:intron 30.0%
TTAAAGAGGAAATGAAAGGA+TGG - chr3_4:50552309-50552328 None:intergenic 30.0%
!! GCTTTTAAAGAGGAAATGAA+AGG - chr3_4:50552313-50552332 None:intergenic 30.0%
!! CTCAGTAAAAGCTTTTAAAG+AGG - chr3_4:50552323-50552342 None:intergenic 30.0%
!! CTCTTTAAAAGCTTTTACTG+AGG + chr3_4:50552321-50552340 Msa0505180:intron 30.0%
TGTTATGTATACAGACTTGA+AGG + chr3_4:50552471-50552490 Msa0505180:intron 30.0%
! TTCAGCATTTTCCATTGTTT+TGG + chr3_4:50552692-50552711 Msa0505180:intron 30.0%
! CGATAATTTGAAATCCTCAA+TGG + chr3_4:50552741-50552760 Msa0505180:five_prime_UTR 30.0%
CTGAAAGAACTGTTTATTGA+AGG + chr3_4:50552796-50552815 Msa0505180:five_prime_UTR 30.0%
!! TGTCTTTAATTTTGGGTGTA+TGG + chr3_4:50552846-50552865 Msa0505180:intron 30.0%
!! GTCTTTAATTTTGGGTGTAT+GGG + chr3_4:50552847-50552866 Msa0505180:intron 30.0%
TGAATATATGATGATTGCGT+AGG + chr3_4:50553081-50553100 Msa0505180:intron 30.0%
!!! TCCTACAAAATTGGCTTTTA+AGG + chr3_4:50553163-50553182 Msa0505180:intron 30.0%
!!! CCTACAAAATTGGCTTTTAA+GGG + chr3_4:50553164-50553183 Msa0505180:intron 30.0%
GCATTTGTACAAAACGTATT+TGG + chr3_4:50553237-50553256 Msa0505180:intron 30.0%
TGGTTAATATTTAAACTCCC+AGG + chr3_4:50553257-50553276 Msa0505180:intron 30.0%
!! ACGTTCACTTTTATTCATGT+GGG - chr3_4:50553424-50553443 None:intergenic 30.0%
AAATGTTTCCAAGCTCATAA+GGG + chr3_4:50553495-50553514 Msa0505180:intron 30.0%
TTCCCAGGAAAGAATTATTA+CGG - chr3_4:50553560-50553579 None:intergenic 30.0%
TATAGCTGGGAATCTAATAT+TGG - chr3_4:50553621-50553640 None:intergenic 30.0%
TAACCCAAGTAGTTTAGTAA+TGG + chr3_4:50553782-50553801 Msa0505180:intron 30.0%
AACCCAAGTAGTTTAGTAAT+GGG + chr3_4:50553783-50553802 Msa0505180:intron 30.0%
TACCCATTACTAAACTACTT+GGG - chr3_4:50553788-50553807 None:intergenic 30.0%
ATTAACACCATATGAGAACT+TGG + chr3_4:50553830-50553849 Msa0505180:intron 30.0%
GTCTCACATTAAATGTGATA+TGG - chr3_4:50553932-50553951 None:intergenic 30.0%
AAACGAAAAGACCTAAACTT+GGG - chr3_4:50554019-50554038 None:intergenic 30.0%
AAAACGAAAAGACCTAAACT+TGG - chr3_4:50554020-50554039 None:intergenic 30.0%
ATTTGTATTGGAAAGAACAG+AGG - chr3_4:50554073-50554092 None:intergenic 30.0%
!! ATCCCCTCTTTTATTTGTAT+TGG - chr3_4:50554085-50554104 None:intergenic 30.0%
TACAAATAAAAGAGGGGATA+AGG + chr3_4:50554086-50554105 Msa0505180:intron 30.0%
ACAAATAAAAGAGGGGATAA+GGG + chr3_4:50554087-50554106 Msa0505180:intron 30.0%
ATATTAGTGAAACTTAGGTG+AGG + chr3_4:50554126-50554145 Msa0505180:intron 30.0%
TATTAGTGAAACTTAGGTGA+GGG + chr3_4:50554127-50554146 Msa0505180:intron 30.0%
TCTCAATGGAAAAACAATGT+TGG + chr3_4:50554198-50554217 Msa0505180:intron 30.0%
CTCAATGGAAAAACAATGTT+GGG + chr3_4:50554199-50554218 Msa0505180:intron 30.0%
TGGATGCATCCATAAAAATA+GGG - chr3_4:50554425-50554444 None:intergenic 30.0%
ATGGATGCATCCATAAAAAT+AGG - chr3_4:50554426-50554445 None:intergenic 30.0%
!! TATTTTTATGGATGCATCCA+TGG + chr3_4:50554425-50554444 Msa0505180:intron 30.0%
!! CAATTGAAGGTCATTTTGAA+GGG - chr3_4:50555194-50555213 None:intergenic 30.0%
ATAAGCCAAAAATTCTCAAG+TGG + chr3_4:50554564-50554583 Msa0505180:intron 30.0%
!! TTTTATGATATGATGGTGAG+AGG - chr3_4:50554712-50554731 None:intergenic 30.0%
! GGGATTTTAGGCTTATATAA+GGG + chr3_4:50555087-50555106 Msa0505180:intron 30.0%
! GGATTTTAGGCTTATATAAG+GGG + chr3_4:50555088-50555107 Msa0505180:intron 30.0%
! GATTTTAGGCTTATATAAGG+GGG + chr3_4:50555089-50555108 Msa0505180:intron 30.0%
!! CAATTGAAGGTCATTTTGAA+GGG + chr3_4:50555194-50555213 Msa0505180:intron 30.0%
AAAAATAGGGACCATATTAG+GGG + chr3_4:50555234-50555253 Msa0505180:intron 30.0%
CAAACACATGTATACATGTT+TGG - chr3_4:50555500-50555519 None:intergenic 30.0%
ATGTATACATGTGTTTGCAT+TGG + chr3_4:50555503-50555522 Msa0505180:intron 30.0%
!! TTGTTCTTTCTGGAATTAAG+TGG - chr3_4:50555548-50555567 None:intergenic 30.0%
TTTGTTTACATGTGAGACAA+AGG - chr3_4:50555610-50555629 None:intergenic 30.0%
TCACATTAAAACATAAGGTC+TGG + chr3_4:50555676-50555695 Msa0505180:intron 30.0%
! AGCAAAAAAACCACATTTTG+AGG - chr3_4:50555781-50555800 None:intergenic 30.0%
AAGAAAGATGTTTATGGGTA+AGG - chr3_4:50556002-50556021 None:intergenic 30.0%
!! TTTCCTCATTTTTGCAGTAT+TGG + chr3_4:50556175-50556194 Msa0505180:intron 30.0%
GAGAAAAATGAAAGTAGGAT+AGG + chr3_4:50556197-50556216 Msa0505180:intron 30.0%
AATAAAAATGTACTCCCTTC+AGG - chr3_4:50556430-50556449 None:intergenic 30.0%
!! TCTTATGAGTTGATGTTGTT+TGG - chr3_4:50556679-50556698 None:intergenic 30.0%
TGTTTACATTCTCTTTGGTT+TGG + chr3_4:50557005-50557024 Msa0505180:five_prime_UTR 30.0%
TAAGAAAATCAATTCCACGT+AGG - chr3_4:50557092-50557111 None:intergenic 30.0%
GATTAATCAGAAACTTCAGA+TGG + chr3_4:50557285-50557304 Msa0505180:five_prime_UTR 30.0%
GCTAAAATTTACTCACTCTT+TGG + chr3_4:50557337-50557356 Msa0505180:intron 30.0%
!! GTTTTCTAGTAGCTAAAAAG+TGG - chr3_4:50557435-50557454 None:intergenic 30.0%
!! GTCTCACTTTTCTTTCATTT+TGG + chr3_4:50557462-50557481 Msa0505180:intron 30.0%
TACATAAAGATAAGGCTAAG+TGG + chr3_4:50557591-50557610 Msa0505180:intron 30.0%
TCAGATGAATGAAGATTATC+AGG + chr3_4:50557668-50557687 Msa0505180:five_prime_UTR 30.0%
ACCCAATCACTAAAATCAAA+AGG - chr3_4:50557752-50557771 None:intergenic 30.0%
!!! ATTTTAGTGATTGGGTTGAT+TGG + chr3_4:50557756-50557775 Msa0505180:intron 30.0%
ATAAATTATAACAACCGAGC+AGG - chr3_4:50557940-50557959 None:intergenic 30.0%
TTTGATTCAACAACGAAGAT+TGG - chr3_4:50558050-50558069 None:intergenic 30.0%
AACAAAAACAGCAATAGACT+AGG + chr3_4:50558381-50558400 Msa0505180:intron 30.0%
TCCATCTTATTCCCTTTAAT+GGG + chr3_4:50558572-50558591 Msa0505180:intron 30.0%
CACCATATTAAAATATGGAC+TGG + chr3_4:50558600-50558619 Msa0505180:intron 30.0%
TTAAATTCGAGGTTAGTAGT+GGG - chr3_4:50558669-50558688 None:intergenic 30.0%
TACATCCAGTTTCAAAAACA+TGG + chr3_4:50558781-50558800 Msa0505180:intron 30.0%
! AAAGGAAATAAAAGGCATAC+TGG - chr3_4:50558980-50558999 None:intergenic 30.0%
TCTGCTGTTAAGAATAATCA+TGG + chr3_4:50559063-50559082 Msa0505180:intron 30.0%
TACTAGAAAGGGGAAAAAAA+CGG - chr3_4:50559141-50559160 None:intergenic 30.0%
ATTATATTCTGCAACATTGG+CGG - chr3_4:50559396-50559415 None:intergenic 30.0%
AGCATTATATTCTGCAACAT+TGG - chr3_4:50559399-50559418 None:intergenic 30.0%
!!! AATCTTGTTTTCTATGCTAC+AGG + chr3_4:50559422-50559441 Msa0505180:intron 30.0%
CTATATACCAAGAAATTGAG+TGG - chr3_4:50559810-50559829 None:intergenic 30.0%
TTAACTCAATGGTCATTTCA+GGG - chr3_4:50559860-50559879 None:intergenic 30.0%
!! TCGCAATGTTGTTTCATAAA+AGG + chr3_4:50559909-50559928 Msa0505180:intron 30.0%
!! CAATGTTGTTTCATAAAAGG+TGG + chr3_4:50559912-50559931 Msa0505180:intron 30.0%
GAATTGTAGATTACAAAGGA+GGG - chr3_4:50560012-50560031 None:intergenic 30.0%
AGAATTGTAGATTACAAAGG+AGG - chr3_4:50560013-50560032 None:intergenic 30.0%
CCTTTGTAATCTACAATTCT+CGG + chr3_4:50560013-50560032 Msa0505180:intron 30.0%
TGAGATGTGGTTAAATTCTT+TGG + chr3_4:50560145-50560164 Msa0505180:intron 30.0%
TTGGATAGTTTAAACCTCTT+AGG + chr3_4:50560164-50560183 Msa0505180:intron 30.0%
TTTACTTTGTTAGTCCTAAG+AGG - chr3_4:50560181-50560200 None:intergenic 30.0%
TACAGTACTATAAGTAAGTC+TGG + chr3_4:50560293-50560312 Msa0505180:intron 30.0%
! TATGTATACAGAAAGAGTGT+TGG + chr3_4:50560372-50560391 Msa0505180:intron 30.0%
AAGAAGCTTCAAAATGTTCA+AGG - chr3_4:50560424-50560443 None:intergenic 30.0%
!!! GCTTCTTTCCCATTTTAATT+TGG + chr3_4:50560437-50560456 Msa0505180:intron 30.0%
TTAAGTCTTTACCTGAAGTT+AGG - chr3_4:50560610-50560629 None:intergenic 30.0%
!!! TCTTGTCGATTTTGATTTTC+TGG + chr3_4:50560680-50560699 Msa0505180:intron 30.0%
! GCATCATAATGCTCTTTTAT+TGG + chr3_4:50560768-50560787 Msa0505180:intron 30.0%
GTAGCATTTCAGTTAGTTAT+TGG - chr3_4:50560810-50560829 None:intergenic 30.0%
AACTTCTAATCCAAAAGTGA+AGG + chr3_4:50560943-50560962 Msa0505180:intron 30.0%
! TAATCCAAAAGTGAAGGTTT+TGG + chr3_4:50560949-50560968 Msa0505180:intron 30.0%
! AATCCAAAAGTGAAGGTTTT+GGG + chr3_4:50560950-50560969 Msa0505180:intron 30.0%
TATTATGTATCCATGTGGAT+TGG - chr3_4:50561035-50561054 None:intergenic 30.0%
GAGTTTATTATGTATCCATG+TGG - chr3_4:50561040-50561059 None:intergenic 30.0%
!!! ACTCTTCGTTTTTTCTTTCA+TGG + chr3_4:50561056-50561075 Msa0505180:intron 30.0%
GAAATTTGTGGAGAAAGATT+TGG + chr3_4:50561374-50561393 Msa0505180:CDS 30.0%
!! ACTTTTTCTCCTTCTCTATT+TGG - chr3_4:50561448-50561467 None:intergenic 30.0%
TCAAGGTTCAAATTGTGAAT+CGG + chr3_4:50561603-50561622 Msa0505180:intron 30.0%
AACAAGACTTATTCACGATA+AGG - chr3_4:50561641-50561660 None:intergenic 30.0%
ACATCAAAAGACAAGAAAAG+TGG + chr3_4:50561788-50561807 Msa0505180:intron 30.0%
GTTGTCAAAAAAAAAGTGGT+TGG + chr3_4:50561824-50561843 Msa0505180:intron 30.0%
TGTTTCAATAGAATGAGTCA+TGG + chr3_4:50561866-50561885 Msa0505180:intron 30.0%
CAGCATTCATCATAATCAAT+TGG + chr3_4:50561904-50561923 Msa0505180:intron 30.0%
ATCTCTAGTGTGAAACTATT+GGG - chr3_4:50561951-50561970 None:intergenic 30.0%
AATCTCTAGTGTGAAACTAT+TGG - chr3_4:50561952-50561971 None:intergenic 30.0%
! CACTAGAGATTTGTATTGAT+TGG + chr3_4:50561961-50561980 Msa0505180:intron 30.0%
!! GATTGGTTTCAATCAAGTAT+TGG + chr3_4:50561978-50561997 Msa0505180:intron 30.0%
AACTTATGGATAACATAGTC+AGG + chr3_4:50562060-50562079 Msa0505180:intron 30.0%
ACTTATGGATAACATAGTCA+GGG + chr3_4:50562061-50562080 Msa0505180:intron 30.0%
CAGTATCACAAGAGTTAATA+AGG + chr3_4:50562175-50562194 Msa0505180:intron 30.0%
TTGTATAAGAGGATTTGTCT+TGG + chr3_4:50562211-50562230 Msa0505180:intron 30.0%
!! AAAGCAAACATGTGGTTTTA+TGG + chr3_4:50562301-50562320 Msa0505180:intron 30.0%
!!! AAGCAAACATGTGGTTTTAT+GGG + chr3_4:50562302-50562321 Msa0505180:intron 30.0%
TAGTCCATTTCCTTTCATTA+TGG - chr3_4:50562353-50562372 None:intergenic 30.0%
!!! ATTTATCACACTGACTTTTG+AGG + chr3_4:50562551-50562570 Msa0505180:intron 30.0%
! GAGGATTTCAAAGGATTTTA+TGG + chr3_4:50562570-50562589 Msa0505180:intron 30.0%
CATGAAAAGATGAGATTTCT+TGG - chr3_4:50563131-50563150 None:intergenic 30.0%
!!! TGGATTTTGATGGATTTTGT+GGG - chr3_4:50563189-50563208 None:intergenic 30.0%
!!! TTGGATTTTGATGGATTTTG+TGG - chr3_4:50563190-50563209 None:intergenic 30.0%
GCAACTTAAAAAAAGTCTTG+TGG - chr3_4:50563337-50563356 None:intergenic 30.0%
TAAATATTAGGGGGATGTAT+TGG - chr3_4:50563433-50563452 None:intergenic 30.0%
TTTCAAGATAATGAAGAACC+TGG - chr3_4:50563469-50563488 None:intergenic 30.0%
ATTTGTTCAAGCAATTGATG+TGG - chr3_4:50563500-50563519 None:intergenic 30.0%
ACATCAATTGCTTGAACAAA+TGG + chr3_4:50563499-50563518 Msa0505180:CDS 30.0%
!! TCCTTACCATTTTAATGACA+TGG + chr3_4:50563991-50564010 Msa0505180:intron 30.0%
TCCATGTCATTAAAATGGTA+AGG - chr3_4:50563995-50564014 None:intergenic 30.0%
TTCTTCCATGTCTTCAACTT+CGG - chr3_4:50548713-50548732 None:intergenic 35.0%
! AAGTTCAGTTTGGATGGATT+TGG + chr3_4:50549085-50549104 Msa0505180:intron 35.0%
ACGATTACAGTAAGATACGT+CGG - chr3_4:50549398-50549417 None:intergenic 35.0%
!! TTTTAAGTATGGCGTTGTGT+TGG + chr3_4:50549475-50549494 Msa0505180:intron 35.0%
! ACTTTTGTCCCTATTGAAAC+CGG + chr3_4:50549534-50549553 Msa0505180:intron 35.0%
!! TAACAACACCGGTTTCAATA+GGG - chr3_4:50549545-50549564 None:intergenic 35.0%
!! TTAACAACACCGGTTTCAAT+AGG - chr3_4:50549546-50549565 None:intergenic 35.0%
GTTAAATAGCACAGCTATAG+CGG + chr3_4:50549561-50549580 Msa0505180:intron 35.0%
CGTTCAAGTCCAAAAAGAAA+TGG - chr3_4:50549784-50549803 None:intergenic 35.0%
ACATCCTGTAACTTTGTTCT+AGG + chr3_4:50549805-50549824 Msa0505180:intron 35.0%
GTATTCTGGCAATTTGTACA+AGG + chr3_4:50549850-50549869 Msa0505180:five_prime_UTR 35.0%
TTGCTTTGTCGAATTGTTCA+AGG + chr3_4:50550262-50550281 Msa0505180:five_prime_UTR 35.0%
AGTTACAGGCAGAAATTTAC+AGG - chr3_4:50551025-50551044 None:intergenic 35.0%
AGTATGCCTTCAGTATCAAA+TGG - chr3_4:50551053-50551072 None:intergenic 35.0%
ATGAACAGATAGATCCAATG+TGG - chr3_4:50551076-50551095 None:intergenic 35.0%
TCATATAGTCCTCATCAAAG+GGG - chr3_4:50551143-50551162 None:intergenic 35.0%
AATGGGATGATGATTGTTCT+TGG + chr3_4:50551229-50551248 Msa0505180:five_prime_UTR 35.0%
ATGATTGTTCTTGGAGTGAA+TGG + chr3_4:50551238-50551257 Msa0505180:five_prime_UTR 35.0%
GTTATGATAAAGGAACTTGC+TGG + chr3_4:50551292-50551311 Msa0505180:intron 35.0%
! TGTCATACAAAGCATTAAGG+GGG - chr3_4:50551435-50551454 None:intergenic 35.0%
TTAGAAGAACGTAGAAAGCA+TGG - chr3_4:50551500-50551519 None:intergenic 35.0%
! CTAGTGTTCATTTTGTCCAT+GGG + chr3_4:50551589-50551608 Msa0505180:intron 35.0%
! TAGTGTTCATTTTGTCCATG+GGG + chr3_4:50551590-50551609 Msa0505180:intron 35.0%
! GCCCAGTTCCATTTAATTTA+TGG + chr3_4:50551882-50551901 Msa0505180:intron 35.0%
TTTATGGATAAGTTGCATGC+AGG + chr3_4:50551898-50551917 Msa0505180:intron 35.0%
GAAGATGGTTGAAAGTTCTA+TGG + chr3_4:50551948-50551967 Msa0505180:five_prime_UTR 35.0%
GGTTGAAAGTTCTATGGAAA+TGG + chr3_4:50551954-50551973 Msa0505180:five_prime_UTR 35.0%
!!! GTTTGGTTTTGATTCTACAG+GGG - chr3_4:50552065-50552084 None:intergenic 35.0%
TAGCAATGAGTCATCATGTT+TGG - chr3_4:50552082-50552101 None:intergenic 35.0%
GATGCAATTACTACGAAAAC+CGG + chr3_4:50552422-50552441 Msa0505180:intron 35.0%
ATCAACAAGAACATGCAACT+GGG - chr3_4:50552526-50552545 None:intergenic 35.0%
! TGCATTGCAAATGTCATTTG+AGG + chr3_4:50552545-50552564 Msa0505180:five_prime_UTR 35.0%
GATTTCAAATTATCGGAACC+AGG - chr3_4:50552736-50552755 None:intergenic 35.0%
TAACTGTAAGAGCAGACTAA+TGG - chr3_4:50552911-50552930 None:intergenic 35.0%
ATGTTCAATAAATCTGCCAC+TGG + chr3_4:50552941-50552960 Msa0505180:intron 35.0%
TGTTCAATAAATCTGCCACT+GGG + chr3_4:50552942-50552961 Msa0505180:intron 35.0%
! CCCTTAAAAGCCAATTTTGT+AGG - chr3_4:50553167-50553186 None:intergenic 35.0%
! CAGGGAAGGAATTTAGAATT+CGG - chr3_4:50553202-50553221 None:intergenic 35.0%
TTGGAATAATATTCCAGGGA+AGG - chr3_4:50553216-50553235 None:intergenic 35.0%
TTCCCTGGAATATTATTCCA+AGG + chr3_4:50553215-50553234 Msa0505180:intron 35.0%
TGCCTTGGAATAATATTCCA+GGG - chr3_4:50553220-50553239 None:intergenic 35.0%
ATGCCTTGGAATAATATTCC+AGG - chr3_4:50553221-50553240 None:intergenic 35.0%
! TACGTTTTGTACAAATGCCT+TGG - chr3_4:50553235-50553254 None:intergenic 35.0%
!! GTTCACTTTTATTCATGTGG+GGG - chr3_4:50553422-50553441 None:intergenic 35.0%
!! CGTTCACTTTTATTCATGTG+GGG - chr3_4:50553423-50553442 None:intergenic 35.0%
!! CACGTTCACTTTTATTCATG+TGG - chr3_4:50553425-50553444 None:intergenic 35.0%
GAAATGTTTCCAAGCTCATA+AGG + chr3_4:50553494-50553513 Msa0505180:intron 35.0%
AATGTTTCCAAGCTCATAAG+GGG + chr3_4:50553496-50553515 Msa0505180:intron 35.0%
TCCCAGGAAAGAATTATTAC+GGG - chr3_4:50553559-50553578 None:intergenic 35.0%
GGAAATAGATAATTGTTCCC+AGG - chr3_4:50553575-50553594 None:intergenic 35.0%
TGGAAATCTTTCACCAAAGA+GGG - chr3_4:50553668-50553687 None:intergenic 35.0%
CTACCCATTACTAAACTACT+TGG - chr3_4:50553789-50553808 None:intergenic 35.0%
ACCATATGAGAACTTGGATT+GGG + chr3_4:50553836-50553855 Msa0505180:intron 35.0%
! CTCTACAAATCCAGCTTTTA+AGG + chr3_4:50553869-50553888 Msa0505180:intron 35.0%
!!! GGGTGTGGTTTTATATTTGA+TGG + chr3_4:50554147-50554166 Msa0505180:intron 35.0%
GCATACTGGAAAGAAAAAAG+TGG + chr3_4:50554248-50554267 Msa0505180:intron 35.0%
TAGGGACACCCAATATAATA+TGG - chr3_4:50554395-50554414 None:intergenic 35.0%
TATATTGGGTGTCCCTAATA+TGG + chr3_4:50554398-50554417 Msa0505180:intron 35.0%
!! GCAATTGAAGGTCATTTTGA+AGG - chr3_4:50555193-50555212 None:intergenic 35.0%
TCAAAATGACCTTCAATTGC+AGG + chr3_4:50554453-50554472 Msa0505180:intron 35.0%
! CTTCTCCACTTGAGAATTTT+TGG - chr3_4:50554572-50554591 None:intergenic 35.0%
AGGAGAGATAAAAGAAGAAG+AGG - chr3_4:50554639-50554658 None:intergenic 35.0%
TAACAGAGAGAGAGAGATAA+AGG - chr3_4:50554766-50554785 None:intergenic 35.0%
GGAGAAATTGATCCAACTTA+TGG - chr3_4:50554795-50554814 None:intergenic 35.0%
TTCACATGTTCACAAGATGT+TGG - chr3_4:50554847-50554866 None:intergenic 35.0%
GAATGTATGTACAATAGTGG+TGG - chr3_4:50554922-50554941 None:intergenic 35.0%
GGTGAATGTATGTACAATAG+TGG - chr3_4:50554925-50554944 None:intergenic 35.0%
AGAGAGAGAAAGAGATTTGT+TGG - chr3_4:50554946-50554965 None:intergenic 35.0%
! GGGGATTTTAGGCTTATATA+AGG + chr3_4:50555086-50555105 Msa0505180:intron 35.0%
TTTGTGTAACCTGCAATTGA+AGG + chr3_4:50555181-50555200 Msa0505180:intron 35.0%
TCAAAATGACCTTCAATTGC+AGG - chr3_4:50554453-50554472 None:intergenic 35.0%
!! GCAATTGAAGGTCATTTTGA+AGG + chr3_4:50555193-50555212 Msa0505180:intron 35.0%
!! CATTGGTTTCCAAGAACATT+AGG + chr3_4:50555520-50555539 Msa0505180:intron 35.0%
TAAGTGGTACCTAATGTTCT+TGG - chr3_4:50555532-50555551 None:intergenic 35.0%
GCAGTTATAATGACAAAACG+CGG + chr3_4:50555863-50555882 Msa0505180:intron 35.0%
CAGTTATAATGACAAAACGC+GGG + chr3_4:50555864-50555883 Msa0505180:intron 35.0%
AGAAGATCTTATGGGTAACT+TGG - chr3_4:50555973-50555992 None:intergenic 35.0%
GGAATTGGAGAAGATCTTAT+GGG - chr3_4:50555981-50556000 None:intergenic 35.0%
AGGAATTGGAGAAGATCTTA+TGG - chr3_4:50555982-50556001 None:intergenic 35.0%
GATGTTTATGGGTAAGGAAT+TGG - chr3_4:50555996-50556015 None:intergenic 35.0%
TCTCCAATACTGCAAAAATG+AGG - chr3_4:50556181-50556200 None:intergenic 35.0%
AGTAAACTCTGCAATCTTCA+TGG + chr3_4:50556227-50556246 Msa0505180:intron 35.0%
GGAGAACACGATGAAAAATT+AGG + chr3_4:50556260-50556279 Msa0505180:intron 35.0%
ATCAGAATTGAAGGGAAGAA+AGG + chr3_4:50556300-50556319 Msa0505180:intron 35.0%
AAAGTGTGTGTTTGGTATAG+CGG - chr3_4:50556809-50556828 None:intergenic 35.0%
! GACATGCTGATATATTTTGC+TGG + chr3_4:50556833-50556852 Msa0505180:intron 35.0%
ATAAGTGATGTAATCTCTGC+AGG + chr3_4:50556894-50556913 Msa0505180:intron 35.0%
CTCTATCCATAGTACAGAAA+TGG - chr3_4:50557176-50557195 None:intergenic 35.0%
TACAAAGACCAAGACATCAA+AGG - chr3_4:50557561-50557580 None:intergenic 35.0%
GAAGATTATCAGGACTGTAT+CGG + chr3_4:50557678-50557697 Msa0505180:five_prime_UTR 35.0%
TCATATAGATTCCATGACTG+AGG + chr3_4:50557710-50557729 Msa0505180:five_prime_UTR 35.0%
!! ACTGGTCTTGTTTAAATTGC+AGG + chr3_4:50557821-50557840 Msa0505180:intron 35.0%
TAAATTGCAGGAAGAAAGTG+TGG + chr3_4:50557833-50557852 Msa0505180:intron 35.0%
AGTGACTGGTAACATGATAA+TGG - chr3_4:50558026-50558045 None:intergenic 35.0%
AGTAAGTGACCCAAAAAATC+AGG + chr3_4:50558260-50558279 Msa0505180:intron 35.0%
! TATATTTTGTTCGTCCTCTC+TGG - chr3_4:50558300-50558319 None:intergenic 35.0%
AGAATGACAAATTGAAGGAG+GGG - chr3_4:50558553-50558572 None:intergenic 35.0%
GAGAATGACAAATTGAAGGA+GGG - chr3_4:50558554-50558573 None:intergenic 35.0%
GATGGAGAATGACAAATTGA+AGG - chr3_4:50558558-50558577 None:intergenic 35.0%
CTCCATCTTATTCCCTTTAA+TGG + chr3_4:50558571-50558590 Msa0505180:intron 35.0%
!!! GCCCAGTCCATATTTTAATA+TGG - chr3_4:50558605-50558624 None:intergenic 35.0%
TAAATTCGAGGTTAGTAGTG+GGG - chr3_4:50558668-50558687 None:intergenic 35.0%
GTTAAATTCGAGGTTAGTAG+TGG - chr3_4:50558670-50558689 None:intergenic 35.0%
GATGTATCATTAACTTAGCG+AGG - chr3_4:50558767-50558786 None:intergenic 35.0%
!!! AGAAGCCATGTTTTTGAAAC+TGG - chr3_4:50558789-50558808 None:intergenic 35.0%
GGTATGTTACCTTAAACAGT+AGG + chr3_4:50558883-50558902 Msa0505180:intron 35.0%
GATCAAAAGCCTACTGTTTA+AGG - chr3_4:50558895-50558914 None:intergenic 35.0%
! AACAGTAGGCTTTTGATCTT+TGG + chr3_4:50558897-50558916 Msa0505180:intron 35.0%
AAAGCAAGAGCTACATAACA+TGG - chr3_4:50559041-50559060 None:intergenic 35.0%
ACGAGTTTGTAACTTGAATG+AGG - chr3_4:50559097-50559116 None:intergenic 35.0%
CGGAAATATTTCCAAGATCA+TGG - chr3_4:50559121-50559140 None:intergenic 35.0%
CAGTTATGTCTACTAGAAAG+GGG - chr3_4:50559151-50559170 None:intergenic 35.0%
GCAGTTATGTCTACTAGAAA+GGG - chr3_4:50559152-50559171 None:intergenic 35.0%
AGCAGTTATGTCTACTAGAA+AGG - chr3_4:50559153-50559172 None:intergenic 35.0%
TAACAGAAAGCCTGAAGATA+CGG + chr3_4:50559209-50559228 Msa0505180:intron 35.0%
GCTTACAAATGAATCACCAA+TGG - chr3_4:50559502-50559521 None:intergenic 35.0%
TGAAATCTGAGAGGTCTATA+GGG - chr3_4:50559613-50559632 None:intergenic 35.0%
CAATGCATGTGTCAATAGAT+TGG - chr3_4:50559748-50559767 None:intergenic 35.0%
CAATCTATTGACACATGCAT+TGG + chr3_4:50559746-50559765 Msa0505180:intron 35.0%
GTTAACTCAATGGTCATTTC+AGG - chr3_4:50559861-50559880 None:intergenic 35.0%
! GGTTTTACTTCGCTTGAAAA+AGG + chr3_4:50559933-50559952 Msa0505180:intron 35.0%
TTCATACATGCAGGTGAATT+GGG - chr3_4:50559978-50559997 None:intergenic 35.0%
AATGAGAACTTCATACATGC+AGG - chr3_4:50559987-50560006 None:intergenic 35.0%
CCGAGAATTGTAGATTACAA+AGG - chr3_4:50560016-50560035 None:intergenic 35.0%
ATGTACTATGTGATGAGATG+TGG + chr3_4:50560132-50560151 Msa0505180:intron 35.0%
GAAAAGGATATCCTAACTTC+AGG + chr3_4:50560596-50560615 Msa0505180:five_prime_UTR 35.0%
TGACAGACAAAAAATGGCTT+TGG + chr3_4:50561147-50561166 Msa0505180:intron 35.0%
AAGTCTTCAAAAGTAGCATC+TGG - chr3_4:50561208-50561227 None:intergenic 35.0%
!! CTTTTGAAGACTTTATTCGG+TGG + chr3_4:50561215-50561234 Msa0505180:CDS 35.0%
! GAAGCTTTCTAAGAGAATGT+CGG + chr3_4:50561345-50561364 Msa0505180:CDS 35.0%
TCTCTATTTGGATCAAGAAG+AGG - chr3_4:50561436-50561455 None:intergenic 35.0%
CTTCTTGATCCAAATAGAGA+AGG + chr3_4:50561436-50561455 Msa0505180:CDS 35.0%
ATTTCAAACAATGAGGGAAG+TGG + chr3_4:50561540-50561559 Msa0505180:intron 35.0%
TATGGGAAAAATGTCCATGT+TGG + chr3_4:50562319-50562338 Msa0505180:intron 35.0%
! ATGGACTACTTGTACGTATT+TGG + chr3_4:50562365-50562384 Msa0505180:intron 35.0%
!! CTGACTTTTGAGGATTTCAA+AGG + chr3_4:50562561-50562580 Msa0505180:intron 35.0%
!! CGTTTGAGTTTTTCTAAGAG+AGG + chr3_4:50562954-50562973 Msa0505180:intron 35.0%
TCAATTGCTTGAACAAATGG+TGG + chr3_4:50563502-50563521 Msa0505180:CDS 35.0%
TTATGGAGAACTGAAACAGA+TGG + chr3_4:50563568-50563587 Msa0505180:CDS 35.0%
TCAACAACTTTATCCTACCA+TGG + chr3_4:50563601-50563620 Msa0505180:CDS 35.0%
TTAATTTCGCTCATGTGAGA+AGG + chr3_4:50563663-50563682 Msa0505180:intron 35.0%
GAAAGAAGAGGTTGTTGAAA+AGG + chr3_4:50563908-50563927 Msa0505180:CDS 35.0%
GGAATTTGACAAGAAACAAG+CGG + chr3_4:50564037-50564056 Msa0505180:intron 35.0%
TTGACAACACTTCTCTTTCA+TGG - chr3_4:50564070-50564089 None:intergenic 35.0%
AAAATAATCTCCCTGAGGAT+TGG - chr3_4:50564170-50564189 None:intergenic 35.0%
! GTTTATTGGTCTCAAACTCA+TGG + chr3_4:50564341-50564360 Msa0505180:three_prime_UTR 35.0%
! CGATCATATCTGAGATTCGA+TGG + chr3_4:50548621-50548640 Msa0505180:five_prime_UTR 40.0%
TCATCGTCATCAGTAGAATC+AGG - chr3_4:50548685-50548704 None:intergenic 40.0%
ATGGAAGAAGATGAAGACGT+AGG + chr3_4:50548724-50548743 Msa0505180:intron 40.0%
! TAGAGGCTTTTTGTACGTTC+TGG + chr3_4:50548981-50549000 Msa0505180:intron 40.0%
! GTTGTGTTGGTGGAAATAGT+GGG + chr3_4:50549488-50549507 Msa0505180:intron 40.0%
! TTGTGTTGGTGGAAATAGTG+GGG + chr3_4:50549489-50549508 Msa0505180:intron 40.0%
!! GCTGTGCTATTTAACAACAC+CGG - chr3_4:50549556-50549575 None:intergenic 40.0%
TGCCTTGAAAACTTACAGCA+TGG + chr3_4:50549892-50549911 Msa0505180:five_prime_UTR 40.0%
! CTCCATGCTGTAAGTTTTCA+AGG - chr3_4:50549897-50549916 None:intergenic 40.0%
!!! TATTTTGAGACCAACCCTTC+TGG + chr3_4:50549920-50549939 Msa0505180:five_prime_UTR 40.0%
! ATGGTTAGTAGGTTGAGGTT+TGG + chr3_4:50549955-50549974 Msa0505180:intron 40.0%
! TGGTTAGTAGGTTGAGGTTT+GGG + chr3_4:50549956-50549975 Msa0505180:intron 40.0%
CAAGCCTGCAAATTGGAATT+TGG + chr3_4:50550030-50550049 Msa0505180:five_prime_UTR 40.0%
CACGATCTGCAGTTATGTTT+CGG + chr3_4:50550058-50550077 Msa0505180:five_prime_UTR 40.0%
! GCAGTTATGTTTCGGTGTAA+AGG + chr3_4:50550066-50550085 Msa0505180:five_prime_UTR 40.0%
CCAATATAAGCTTTCCGAGA+AGG - chr3_4:50550400-50550419 None:intergenic 40.0%
CCTTCTCGGAAAGCTTATAT+TGG + chr3_4:50550397-50550416 Msa0505180:five_prime_UTR 40.0%
GAGACAGGAACTCACAAATT+TGG - chr3_4:50550533-50550552 None:intergenic 40.0%
CTTTACATAGAAGAACAGCC+TGG - chr3_4:50550979-50550998 None:intergenic 40.0%
TTACTGGTGAGACATCAAGT+GGG + chr3_4:50551202-50551221 Msa0505180:five_prime_UTR 40.0%
TCTGCAGAAGATCCTGTTAA+AGG + chr3_4:50551264-50551283 Msa0505180:five_prime_UTR 40.0%
TTGCTGGTAGAAATAGCTGT+TGG + chr3_4:50551308-50551327 Msa0505180:intron 40.0%
! GTCATACAAAGCATTAAGGG+GGG - chr3_4:50551434-50551453 None:intergenic 40.0%
GGACAAAATGAACACTAGGT+GGG - chr3_4:50551587-50551606 None:intergenic 40.0%
TGGACAAAATGAACACTAGG+TGG - chr3_4:50551588-50551607 None:intergenic 40.0%
CCATGGACAAAATGAACACT+AGG - chr3_4:50551591-50551610 None:intergenic 40.0%
! CCTAGTGTTCATTTTGTCCA+TGG + chr3_4:50551588-50551607 Msa0505180:intron 40.0%
GGGAAGTCTAACGATTTCTT+TGG + chr3_4:50551610-50551629 Msa0505180:intron 40.0%
AGAGGCTAGACATACAGAAT+GGG - chr3_4:50551713-50551732 None:intergenic 40.0%
AAGAGGCTAGACATACAGAA+TGG - chr3_4:50551714-50551733 None:intergenic 40.0%
CTCATGAAAACAGCAAAGCA+TGG - chr3_4:50551847-50551866 None:intergenic 40.0%
!!! CATGCTTTGCTGTTTTCATG+AGG + chr3_4:50551845-50551864 Msa0505180:intron 40.0%
CACAATATGGTCAGAGAAGA+TGG + chr3_4:50551933-50551952 Msa0505180:five_prime_UTR 40.0%
TTCTATGGAAATGGCTGAAC+TGG + chr3_4:50551963-50551982 Msa0505180:five_prime_UTR 40.0%
AGAAGTGGTTGATCTCTCTA+AGG + chr3_4:50552010-50552029 Msa0505180:five_prime_UTR 40.0%
CATCAACAAGAACATGCAAC+TGG - chr3_4:50552527-50552546 None:intergenic 40.0%
!!! TTTTCCATTGTTTTGGCCTG+TGG + chr3_4:50552699-50552718 Msa0505180:intron 40.0%
TATATGATGATTGCGTAGGC+AGG + chr3_4:50553085-50553104 Msa0505180:intron 40.0%
CGAATTCTAAATTCCTTCCC+TGG + chr3_4:50553200-50553219 Msa0505180:intron 40.0%
TTTGCCATGTGTGATGCAAT+TGG - chr3_4:50553375-50553394 None:intergenic 40.0%
AGTGAACGTGCATTAAGTAG+TGG + chr3_4:50553435-50553454 Msa0505180:intron 40.0%
! AACGTGCATTAAGTAGTGGA+GGG + chr3_4:50553439-50553458 Msa0505180:intron 40.0%
TGGAAACATTTCATTCCCGT+CGG - chr3_4:50553486-50553505 None:intergenic 40.0%
ATGTTTCCAAGCTCATAAGG+GGG + chr3_4:50553497-50553516 Msa0505180:intron 40.0%
! GGAACTTTTTATTGCCACGT+AGG - chr3_4:50553537-50553556 None:intergenic 40.0%
TCCCCGTAATAATTCTTTCC+TGG + chr3_4:50553554-50553573 Msa0505180:intron 40.0%
CCCAGGAAAGAATTATTACG+GGG - chr3_4:50553558-50553577 None:intergenic 40.0%
CCCCGTAATAATTCTTTCCT+GGG + chr3_4:50553555-50553574 Msa0505180:intron 40.0%
GTGGAAATCTTTCACCAAAG+AGG - chr3_4:50553669-50553688 None:intergenic 40.0%
TGAGACTTGAGAGCCATATT+AGG - chr3_4:50553723-50553742 None:intergenic 40.0%
CACCATATGAGAACTTGGAT+TGG + chr3_4:50553835-50553854 Msa0505180:intron 40.0%
ACCCAATCCAAGTTCTCATA+TGG - chr3_4:50553840-50553859 None:intergenic 40.0%
ATAAAAGAGGGGATAAGGGA+AGG + chr3_4:50554091-50554110 Msa0505180:intron 40.0%
TAAAAGAGGGGATAAGGGAA+GGG + chr3_4:50554092-50554111 Msa0505180:intron 40.0%
GGTTGATTAGACGTTCTCAA+TGG + chr3_4:50554184-50554203 Msa0505180:intron 40.0%
GGAAAAACAATGTTGGGAAG+TGG + chr3_4:50554205-50554224 Msa0505180:intron 40.0%
! TTTTCTTTCCAGTATGCCGA+TGG - chr3_4:50554245-50554264 None:intergenic 40.0%
GTTTGTGAACCTGCAATTGA+AGG - chr3_4:50554465-50554484 None:intergenic 40.0%
CTTGAAGAGAAGAGAAAGAG+AGG - chr3_4:50554604-50554623 None:intergenic 40.0%
TTATCTCTCCTTCACCTTCA+AGG + chr3_4:50554648-50554667 Msa0505180:intron 40.0%
TTTGTGTGTTGAAGCCTTGA+AGG - chr3_4:50554665-50554684 None:intergenic 40.0%
CTGTTAGTTGCTCCATAAGT+TGG + chr3_4:50554780-50554799 Msa0505180:intron 40.0%
TTTCTCCTCTCGTCTGAATT+CGG + chr3_4:50554808-50554827 Msa0505180:intron 40.0%
ACATGTTCACAAGATGTTGG+AGG - chr3_4:50554844-50554863 None:intergenic 40.0%
GATGAAAGTGGAACTTTCAG+CGG - chr3_4:50555001-50555020 None:intergenic 40.0%
GCAAATGCAGAAGATGAAAG+TGG - chr3_4:50555013-50555032 None:intergenic 40.0%
TCATCTTCATCTTCTCCACT+TGG + chr3_4:50555065-50555084 Msa0505180:intron 40.0%
CATCTTCATCTTCTCCACTT+GGG + chr3_4:50555066-50555085 Msa0505180:intron 40.0%
ATCTTCATCTTCTCCACTTG+GGG + chr3_4:50555067-50555086 Msa0505180:intron 40.0%
ATAAGCCTAAAATCCCCAAG+TGG - chr3_4:50555083-50555102 None:intergenic 40.0%
!! AGGTCATTTTGAAGGGACTA+TGG + chr3_4:50555201-50555220 Msa0505180:intron 40.0%
!! GGTCATTTTGAAGGGACTAT+GGG + chr3_4:50555202-50555221 Msa0505180:intron 40.0%
ATGGGTGCACCCTTAAAAAT+AGG + chr3_4:50555220-50555239 Msa0505180:intron 40.0%
TGGGTGCACCCTTAAAAATA+GGG + chr3_4:50555221-50555240 Msa0505180:intron 40.0%
! ATAATAGGGTGCCCCTAATA+TGG - chr3_4:50555248-50555267 None:intergenic 40.0%
GTGCTCATAGTTGTTCTTTC+TGG - chr3_4:50555558-50555577 None:intergenic 40.0%
AACAGACACAAAGAATGCCA+AGG - chr3_4:50555741-50555760 None:intergenic 40.0%
TGGCATTCTTTGTGTCTGTT+TGG + chr3_4:50555741-50555760 Msa0505180:intron 40.0%
!! CTGCTTTTCCCATGATGTTT+GGG + chr3_4:50555814-50555833 Msa0505180:intron 40.0%
TCAGATTGCCCAAACATCAT+GGG - chr3_4:50555825-50555844 None:intergenic 40.0%
TTCAGATTGCCCAAACATCA+TGG - chr3_4:50555826-50555845 None:intergenic 40.0%
TATAATGACAAAACGCGGGT+TGG + chr3_4:50555868-50555887 Msa0505180:intron 40.0%
!! GAAGCTTGGATTTCTAGCTT+CGG - chr3_4:50555895-50555914 None:intergenic 40.0%
TAGAGGGAGAAGAACTGTAT+CGG - chr3_4:50556044-50556063 None:intergenic 40.0%
GCAGATGAAACAGAGAAAAG+TGG + chr3_4:50556094-50556113 Msa0505180:intron 40.0%
AAACTCTGCAATCTTCATGG+AGG + chr3_4:50556230-50556249 Msa0505180:intron 40.0%
AATCTTCATGGAGGCTTCAA+TGG + chr3_4:50556239-50556258 Msa0505180:intron 40.0%
ACTGAATGGTTGAAACCTGA+AGG + chr3_4:50556412-50556431 Msa0505180:intron 40.0%
CTGAATGGTTGAAACCTGAA+GGG + chr3_4:50556413-50556432 Msa0505180:intron 40.0%
TGTCTTGCAAAGTGTGTGTT+TGG - chr3_4:50556817-50556836 None:intergenic 40.0%
! ATTCTCAGATTTTGCCGATG+AGG + chr3_4:50556923-50556942 Msa0505180:five_prime_UTR 40.0%
! TTCTCAGATTTTGCCGATGA+GGG + chr3_4:50556924-50556943 Msa0505180:five_prime_UTR 40.0%
!! CGAAGTCTTATTTCCCTCAT+CGG - chr3_4:50556940-50556959 None:intergenic 40.0%
TAAGACTTCGCGATCTGTAA+AGG + chr3_4:50556950-50556969 Msa0505180:five_prime_UTR 40.0%
AAGACTTCGCGATCTGTAAA+GGG + chr3_4:50556951-50556970 Msa0505180:five_prime_UTR 40.0%
TTTGGCAACTGCAATATACG+TGG + chr3_4:50557023-50557042 Msa0505180:five_prime_UTR 40.0%
!! TTCTTTCCAGCTCTAGGTTT+AGG - chr3_4:50557062-50557081 None:intergenic 40.0%
TGTCAGCCATTTCTGTACTA+TGG + chr3_4:50557167-50557186 Msa0505180:intron 40.0%
! ATGGATAGAGTTTGTTCGAG+AGG + chr3_4:50557186-50557205 Msa0505180:five_prime_UTR 40.0%
! TAGAGTTTGTTCGAGAGGTT+AGG + chr3_4:50557191-50557210 Msa0505180:five_prime_UTR 40.0%
AAGAGTCACAACCATTACCT+AGG + chr3_4:50557224-50557243 Msa0505180:five_prime_UTR 40.0%
TTTCCCTACCTTTGATGTCT+TGG + chr3_4:50557550-50557569 Msa0505180:intron 40.0%
AGACCAAGACATCAAAGGTA+GGG - chr3_4:50557556-50557575 None:intergenic 40.0%
AAGACCAAGACATCAAAGGT+AGG - chr3_4:50557557-50557576 None:intergenic 40.0%
AGCTTGCAATATGCATTGAG+AGG + chr3_4:50557640-50557659 Msa0505180:intron 40.0%
!!! ACACCCAGTGAGATTTTTTC+CGG + chr3_4:50557882-50557901 Msa0505180:five_prime_UTR 40.0%
TTCCCGGAAAAAATCTCACT+GGG - chr3_4:50557888-50557907 None:intergenic 40.0%
TTTCCCGGAAAAAATCTCAC+TGG - chr3_4:50557889-50557908 None:intergenic 40.0%
!!! TTTTTTCCGGGAAAGTTGAC+AGG + chr3_4:50557895-50557914 Msa0505180:five_prime_UTR 40.0%
GATAACAGCTTCCTCTCTTA+TGG + chr3_4:50557991-50558010 Msa0505180:intron 40.0%
AGTTCAAGAGATAGCTCTTG+GGG - chr3_4:50558117-50558136 None:intergenic 40.0%
CAGTTCAAGAGATAGCTCTT+GGG - chr3_4:50558118-50558137 None:intergenic 40.0%
TCAGTTCAAGAGATAGCTCT+TGG - chr3_4:50558119-50558138 None:intergenic 40.0%
AAGAGCTATCTCTTGAACTG+AGG + chr3_4:50558118-50558137 Msa0505180:intron 40.0%
AGAGCTATCTCTTGAACTGA+GGG + chr3_4:50558119-50558138 Msa0505180:intron 40.0%
TCTAATCCTAGACGTGAAGA+GGG - chr3_4:50558206-50558225 None:intergenic 40.0%
AAGTGACCCAAAAAATCAGG+TGG + chr3_4:50558263-50558282 Msa0505180:intron 40.0%
!!! ATTGGGCCACCTGATTTTTT+GGG - chr3_4:50558272-50558291 None:intergenic 40.0%
!!! TATTGGGCCACCTGATTTTT+TGG - chr3_4:50558273-50558292 None:intergenic 40.0%
AAAAAATCAGGTGGCCCAAT+AGG + chr3_4:50558272-50558291 Msa0505180:intron 40.0%
! AGGGAGCATGAATATTGAGA+AGG - chr3_4:50558522-50558541 None:intergenic 40.0%
GAATGACAAATTGAAGGAGG+GGG - chr3_4:50558552-50558571 None:intergenic 40.0%
GGAGAATGACAAATTGAAGG+AGG - chr3_4:50558555-50558574 None:intergenic 40.0%
GCCCATTAAAGGGAATAAGA+TGG - chr3_4:50558576-50558595 None:intergenic 40.0%
ATGGTGATAGGCCCATTAAA+GGG - chr3_4:50558586-50558605 None:intergenic 40.0%
TATGGTGATAGGCCCATTAA+AGG - chr3_4:50558587-50558606 None:intergenic 40.0%
TTCAGGCTTTCTGTTAACAG+TGG - chr3_4:50559205-50559224 None:intergenic 40.0%
TTATACAGGTCCGTATCTTC+AGG - chr3_4:50559222-50559241 None:intergenic 40.0%
TCTTCAGACTTAACTAGGAG+AGG + chr3_4:50559252-50559271 Msa0505180:five_prime_UTR 40.0%
ACTACAATGACAAGGCCAAA+TGG - chr3_4:50559368-50559387 None:intergenic 40.0%
ATGTCTTCTGTCATAAGAGG+TGG - chr3_4:50559450-50559469 None:intergenic 40.0%
TGCATGTCTTCTGTCATAAG+AGG - chr3_4:50559453-50559472 None:intergenic 40.0%
GTGAAATCTGAGAGGTCTAT+AGG - chr3_4:50559614-50559633 None:intergenic 40.0%
AGACCTCTCAGATTTCACAT+AGG + chr3_4:50559616-50559635 Msa0505180:intron 40.0%
GACCTCTCAGATTTCACATA+GGG + chr3_4:50559617-50559636 Msa0505180:intron 40.0%
ACCTCTCAGATTTCACATAG+GGG + chr3_4:50559618-50559637 Msa0505180:intron 40.0%
!! ATATTAAATCGGTGCTGCAG+TGG + chr3_4:50559672-50559691 Msa0505180:intron 40.0%
!! ATAGATTGGCTCAAGTTGGT+TGG - chr3_4:50559734-50559753 None:intergenic 40.0%
! GTCAATAGATTGGCTCAAGT+TGG - chr3_4:50559738-50559757 None:intergenic 40.0%
! ACACATGCATTGGTGTAAAG+TGG + chr3_4:50559756-50559775 Msa0505180:intron 40.0%
TCATACATGCAGGTGAATTG+GGG - chr3_4:50559977-50559996 None:intergenic 40.0%
CTTCATACATGCAGGTGAAT+TGG - chr3_4:50559979-50559998 None:intergenic 40.0%
TATAAGTAAGTCTGGTCCTG+AGG + chr3_4:50560301-50560320 Msa0505180:intron 40.0%
! CTTGCATTTTCATCAACCTC+AGG - chr3_4:50560320-50560339 None:intergenic 40.0%
!! CTGAGGTTGATGAAAATGCA+AGG + chr3_4:50560318-50560337 Msa0505180:intron 40.0%
! ACAGAATTTTTCTGCTCAGC+TGG + chr3_4:50560574-50560593 Msa0505180:intron 40.0%
! TTTTTCTGCTCAGCTGGAAA+AGG + chr3_4:50560580-50560599 Msa0505180:five_prime_UTR 40.0%
! TCTCCCAAAACCTTCACTTT+TGG - chr3_4:50560956-50560975 None:intergenic 40.0%
!! TTATTTTGTGCTAGTGCCAG+TGG + chr3_4:50561006-50561025 Msa0505180:intron 40.0%
GGTTCAAATTGTGAATCGGA+AGG + chr3_4:50561607-50561626 Msa0505180:intron 40.0%
TCGTAAGATACTGACAACCA+TGG + chr3_4:50562017-50562036 Msa0505180:intron 40.0%
TAGTCACTATTGCAACTAGG+AGG - chr3_4:50562130-50562149 None:intergenic 40.0%
TCCTAGTTGCAATAGTGACT+AGG + chr3_4:50562129-50562148 Msa0505180:intron 40.0%
CCTAGTTGCAATAGTGACTA+GGG + chr3_4:50562130-50562149 Msa0505180:intron 40.0%
!! TATGGCTTTATTAACCGAGC+AGG - chr3_4:50562245-50562264 None:intergenic 40.0%
AACCACTTATCTGTGCACTA+TGG - chr3_4:50562263-50562282 None:intergenic 40.0%
AGAAAGGCAAAGCAAACATG+TGG + chr3_4:50562293-50562312 Msa0505180:intron 40.0%
CCATTTCCTTTCATTATGGC+AGG - chr3_4:50562349-50562368 None:intergenic 40.0%
CCTGCCATAATGAAAGGAAA+TGG + chr3_4:50562346-50562365 Msa0505180:intron 40.0%
TTTGGTTGCTTGAGAGACTA+AGG + chr3_4:50562383-50562402 Msa0505180:intron 40.0%
TTGGTTGCTTGAGAGACTAA+GGG + chr3_4:50562384-50562403 Msa0505180:intron 40.0%
TAAGGGGGATGTATTGGATT+AGG + chr3_4:50562401-50562420 Msa0505180:intron 40.0%
ATAGAGAGACGAAGAGAGAA+AGG + chr3_4:50563036-50563055 Msa0505180:intron 40.0%
TTAGGGGGATGTATTGGATT+AGG - chr3_4:50563427-50563446 None:intergenic 40.0%
AAGCAATTGATGTGGTCGTA+AGG - chr3_4:50563492-50563511 None:intergenic 40.0%
! ACGCTAAGTCAGACTAGTTA+TGG + chr3_4:50563551-50563570 Msa0505180:CDS 40.0%
AAAATTTCTCTTGAGAGCCG+TGG - chr3_4:50563843-50563862 None:intergenic 40.0%
! TTCAAGCTTGTTCCCATTGT+TGG - chr3_4:50563891-50563910 None:intergenic 40.0%
TGGTAAGGAAGACTTATCTG+TGG - chr3_4:50563980-50563999 None:intergenic 40.0%
TTGACAAGAAACAAGCGGTA+AGG + chr3_4:50564042-50564061 Msa0505180:CDS 40.0%
TCAAAACCTTTCTCCAAGAC+TGG - chr3_4:50564118-50564137 None:intergenic 40.0%
!!! TTGGAGAAAGGTTTTGAGCA+TGG + chr3_4:50564121-50564140 Msa0505180:CDS 40.0%
!!! TGGAGAAAGGTTTTGAGCAT+GGG + chr3_4:50564122-50564141 Msa0505180:CDS 40.0%
GCGAAAAAATAATCTCCCTG+AGG - chr3_4:50564175-50564194 None:intergenic 40.0%
CGTCATCAGTAGAATCAGGT+AGG - chr3_4:50548681-50548700 None:intergenic 45.0%
ACACACCGAAGTTGAAGACA+TGG + chr3_4:50548705-50548724 Msa0505180:five_prime_UTR 45.0%
ATTTCACCCTTGCTTCTTCC+TGG + chr3_4:50548854-50548873 Msa0505180:five_prime_UTR 45.0%
TTTCACCCTTGCTTCTTCCT+GGG + chr3_4:50548855-50548874 Msa0505180:five_prime_UTR 45.0%
CTGAAATAGAGGCTGTTTGC+CGG + chr3_4:50549294-50549313 Msa0505180:five_prime_UTR 45.0%
TAAGTATGGCGTTGTGTTGG+TGG + chr3_4:50549478-50549497 Msa0505180:intron 45.0%
! CGTTGTGTTGGTGGAAATAG+TGG + chr3_4:50549487-50549506 Msa0505180:intron 45.0%
! GCAGTTCTCTTGGAGTATTC+TGG + chr3_4:50549836-50549855 Msa0505180:five_prime_UTR 45.0%
ATTGCTCCTCAAAGTGCAAG+TGG + chr3_4:50550189-50550208 Msa0505180:five_prime_UTR 45.0%
ACTACACCACTTGCACTTTG+AGG - chr3_4:50550198-50550217 None:intergenic 45.0%
TGTAGTTCTTGATGCACCAG+AGG + chr3_4:50550212-50550231 Msa0505180:five_prime_UTR 45.0%
! AACTTTGGCTTCGAAGTCTG+TGG + chr3_4:50550350-50550369 Msa0505180:intron 45.0%
TCGTGAACTGGAACAAATGC+TGG - chr3_4:50550376-50550395 None:intergenic 45.0%
TTCCAGTTCACGATCCTTCT+CGG + chr3_4:50550383-50550402 Msa0505180:five_prime_UTR 45.0%
! TGGGCACTGTATTCACTAGA+AGG + chr3_4:50550431-50550450 Msa0505180:five_prime_UTR 45.0%
! AGGTTTGAAGCAGATCGCAT+TGG + chr3_4:50550451-50550470 Msa0505180:five_prime_UTR 45.0%
! ACTGAAGGCATACTCCACAT+TGG + chr3_4:50551059-50551078 Msa0505180:intron 45.0%
CTTACTGGTGAGACATCAAG+TGG + chr3_4:50551201-50551220 Msa0505180:five_prime_UTR 45.0%
AGACATCAAGTGGGACACAA+TGG + chr3_4:50551211-50551230 Msa0505180:five_prime_UTR 45.0%
GACATCAAGTGGGACACAAT+GGG + chr3_4:50551212-50551231 Msa0505180:five_prime_UTR 45.0%
! TACAAAGCATTAAGGGGGGT+CGG - chr3_4:50551430-50551449 None:intergenic 45.0%
GAAATCGTTAGACTTCCCCA+TGG - chr3_4:50551608-50551627 None:intergenic 45.0%
AACCACTTCTCAGCTTCATG+AGG - chr3_4:50552000-50552019 None:intergenic 45.0%
AACAAGAACATGCAACTGGG+AGG - chr3_4:50552523-50552542 None:intergenic 45.0%
! CGGTGAAGGTATAACCATTG+AGG - chr3_4:50552758-50552777 None:intergenic 45.0%
AGCACACGATCTCTAACAGT+CGG - chr3_4:50552778-50552797 None:intergenic 45.0%
ATAAATCTGCCACTGGGACA+AGG + chr3_4:50552948-50552967 Msa0505180:intron 45.0%
!! GACAAGGTACTGGTGTCTTA+GGG + chr3_4:50552964-50552983 Msa0505180:intron 45.0%
! GTAGGCAGGTATCGTTCATT+GGG + chr3_4:50553099-50553118 Msa0505180:intron 45.0%
GGTATCGTTCATTGGGTGAT+TGG + chr3_4:50553106-50553125 Msa0505180:intron 45.0%
TGCACCAATTGCATCACACA+TGG + chr3_4:50553368-50553387 Msa0505180:intron 45.0%
GAACGTGCATTAAGTAGTGG+AGG + chr3_4:50553438-50553457 Msa0505180:intron 45.0%
! TTAAGTAGTGGAGGGATCAG+CGG + chr3_4:50553447-50553466 Msa0505180:intron 45.0%
CGGTTACACACAAAAACCGA+CGG + chr3_4:50553467-50553486 Msa0505180:intron 45.0%
GGTTACACACAAAAACCGAC+GGG + chr3_4:50553468-50553487 Msa0505180:intron 45.0%
TGTTTCCAAGCTCATAAGGG+GGG + chr3_4:50553498-50553517 Msa0505180:intron 45.0%
GAATCATATTCCTGCCTACG+TGG + chr3_4:50553520-50553539 Msa0505180:intron 45.0%
! CTTTTTATTGCCACGTAGGC+AGG - chr3_4:50553533-50553552 None:intergenic 45.0%
! TCTGAAACAAACGCCCTCTT+TGG + chr3_4:50553652-50553671 Msa0505180:intron 45.0%
TGAGAGCCATATTAGGTGTG+AGG - chr3_4:50553716-50553735 None:intergenic 45.0%
TGGGTTACGTTCCAAATGTC+CGG - chr3_4:50553769-50553788 None:intergenic 45.0%
GCATCGTTCACCTTAAAAGC+TGG - chr3_4:50553882-50553901 None:intergenic 45.0%
ACCAGTCAATCACGTTCTGA+CGG + chr3_4:50553993-50554012 Msa0505180:intron 45.0%
! TTGATGGTTAGGAGAGTGTG+TGG + chr3_4:50554163-50554182 Msa0505180:intron 45.0%
!! GGAACTTTGAAGTCCACCAT+CGG + chr3_4:50554226-50554245 Msa0505180:intron 45.0%
!! AGGTCATTTTGAAGGGACCA+TGG - chr3_4:50554445-50554464 None:intergenic 45.0%
GAAGAGAAGAGAAAGAGAGG+AGG - chr3_4:50554601-50554620 None:intergenic 45.0%
TGTTGAAGCCTTGAAGGTGA+AGG - chr3_4:50554659-50554678 None:intergenic 45.0%
GAGAGGAAGAAGAAGACTAG+AGG - chr3_4:50554695-50554714 None:intergenic 45.0%
CAGAGAGAGAGAGATAAAGG+AGG - chr3_4:50554763-50554782 None:intergenic 45.0%
TTCTCCTCTCGTCTGAATTC+GGG + chr3_4:50554809-50554828 Msa0505180:intron 45.0%
AACTTTCAGCGGTAAAGGGA+AGG - chr3_4:50554990-50555009 None:intergenic 45.0%
GTGGAACTTTCAGCGGTAAA+GGG - chr3_4:50554994-50555013 None:intergenic 45.0%
AGTGGAACTTTCAGCGGTAA+AGG - chr3_4:50554995-50555014 None:intergenic 45.0%
! CTTCTCCACTTGGGGATTTT+AGG + chr3_4:50555075-50555094 Msa0505180:intron 45.0%
GCGTTCACAACCTCAAAATG+TGG + chr3_4:50555768-50555787 Msa0505180:intron 45.0%
CCAAACATCATGGGAAAAGC+AGG - chr3_4:50555816-50555835 None:intergenic 45.0%
!! CCTGCTTTTCCCATGATGTT+TGG + chr3_4:50555813-50555832 Msa0505180:intron 45.0%
GCTAGAAATCCAAGCTTCTG+CGG + chr3_4:50555897-50555916 Msa0505180:intron 45.0%
TGTGCAAAGAGTGACTCAAG+AGG - chr3_4:50556981-50557000 None:intergenic 45.0%
!!! CAGCTCTAGGTTTAGGCTTT+TGG - chr3_4:50557055-50557074 None:intergenic 45.0%
CAAAAGCCTAAACCTAGAGC+TGG + chr3_4:50557053-50557072 Msa0505180:intron 45.0%
GATCAGTTCTTTCCAGCTCT+AGG - chr3_4:50557068-50557087 None:intergenic 45.0%
GAAAGAACTGATCACCTACG+TGG + chr3_4:50557075-50557094 Msa0505180:intron 45.0%
! AGTTTGTTCGAGAGGTTAGG+TGG + chr3_4:50557194-50557213 Msa0505180:five_prime_UTR 45.0%
GTCACAACCATTACCTAGGA+TGG + chr3_4:50557228-50557247 Msa0505180:five_prime_UTR 45.0%
! TTAGGTGCCATCCTAGGTAA+TGG - chr3_4:50557238-50557257 None:intergenic 45.0%
TTACCTAGGATGGCACCTAA+CGG + chr3_4:50557238-50557257 Msa0505180:five_prime_UTR 45.0%
GAAAGGTCGATTGATCCGTT+AGG - chr3_4:50557256-50557275 None:intergenic 45.0%
ATGGTATGTGACCTCAGTCA+TGG - chr3_4:50557724-50557743 None:intergenic 45.0%
! TTGCAGGAAGAAAGTGTGGT+TGG + chr3_4:50557837-50557856 Msa0505180:intron 45.0%
!!! CACCCAGTGAGATTTTTTCC+GGG + chr3_4:50557883-50557902 Msa0505180:five_prime_UTR 45.0%
AGTTCACCTGTCAACTTTCC+CGG - chr3_4:50557904-50557923 None:intergenic 45.0%
TTAGCAAGTGAGAACCTGCT+CGG + chr3_4:50557923-50557942 Msa0505180:intron 45.0%
GGAAGAAACAGCCATAAGAG+AGG - chr3_4:50558005-50558024 None:intergenic 45.0%
CAACGAAGATTGGAAGTGAC+TGG - chr3_4:50558040-50558059 None:intergenic 45.0%
GTCTAATCCTAGACGTGAAG+AGG - chr3_4:50558207-50558226 None:intergenic 45.0%
! GAGTGTAGAGTTTTCCAGAC+TGG + chr3_4:50558232-50558251 Msa0505180:intron 45.0%
TCACTTACTGATGTCCAGTC+TGG - chr3_4:50558249-50558268 None:intergenic 45.0%
! CTAGCTGAAACCCTTTTCTG+AGG + chr3_4:50558459-50558478 Msa0505180:intron 45.0%
GCAGGTTGTTCCTCAGAAAA+GGG - chr3_4:50558472-50558491 None:intergenic 45.0%
AGCAGGTTGTTCCTCAGAAA+AGG - chr3_4:50558473-50558492 None:intergenic 45.0%
! TGAGAAGGAAATTTGGGGCT+AGG - chr3_4:50558507-50558526 None:intergenic 45.0%
!!! AAGAGCTTGCTTTTGGGGTT+GGG - chr3_4:50558632-50558651 None:intergenic 45.0%
TTAGCGAGGACACTAGTTCA+TGG - chr3_4:50558753-50558772 None:intergenic 45.0%
CATAACATGGAGAGAGCAAC+AGG - chr3_4:50559028-50559047 None:intergenic 45.0%
ACAAACTCGTGCCATGATCT+TGG + chr3_4:50559107-50559126 Msa0505180:intron 45.0%
TTAACTAGGAGAGGTTCAGC+TGG + chr3_4:50559261-50559280 Msa0505180:five_prime_UTR 45.0%
TTGGAGAAACCTGTGTGTAC+GGG - chr3_4:50559335-50559354 None:intergenic 45.0%
GTTGGAGAAACCTGTGTGTA+CGG - chr3_4:50559336-50559355 None:intergenic 45.0%
CGGCGAATACTACAATGACA+AGG - chr3_4:50559376-50559395 None:intergenic 45.0%
CAGAAGACATGCATGAAGAG+AGG + chr3_4:50559460-50559479 Msa0505180:five_prime_UTR 45.0%
ATGCAAGCTGTTGAAGCCAT+TGG + chr3_4:50559483-50559502 Msa0505180:five_prime_UTR 45.0%
AGAGGTCTATAGGGTCTCTA+AGG - chr3_4:50559604-50559623 None:intergenic 45.0%
ACCCCTATGTGAAATCTGAG+AGG - chr3_4:50559622-50559641 None:intergenic 45.0%
ATTATCTGTGCCTGTGATGC+AGG + chr3_4:50559784-50559803 Msa0505180:intron 45.0%
ATGCAGGCCACTCAATTTCT+TGG + chr3_4:50559800-50559819 Msa0505180:intron 45.0%
ATACATGCAGGTGAATTGGG+GGG - chr3_4:50559975-50559994 None:intergenic 45.0%
CATACATGCAGGTGAATTGG+GGG - chr3_4:50559976-50559995 None:intergenic 45.0%
CTACAATTCTCGGTGATACG+TGG + chr3_4:50560023-50560042 Msa0505180:intron 45.0%
GATGAAAATGCAAGGACGCT+AGG + chr3_4:50560326-50560345 Msa0505180:intron 45.0%
! TTTATTCGGTGGCATTCACC+TGG + chr3_4:50561226-50561245 Msa0505180:CDS 45.0%
TCTAAGAGAATGTCGGAGCA+CGG + chr3_4:50561352-50561371 Msa0505180:CDS 45.0%
CCCTAGTCACTATTGCAACT+AGG - chr3_4:50562133-50562152 None:intergenic 45.0%
AGCCATAGTGCACAGATAAG+TGG + chr3_4:50562258-50562277 Msa0505180:intron 45.0%
TGGTTGCTTGAGAGACTAAG+GGG + chr3_4:50562385-50562404 Msa0505180:intron 45.0%
AGAGACTAAGGGGGATGTAT+TGG + chr3_4:50562395-50562414 Msa0505180:intron 45.0%
ACGAAGAGAGAAAGGAGAGA+GGG + chr3_4:50563044-50563063 Msa0505180:intron 45.0%
!! TCTGCTTTGAGGCCTTTACA+AGG + chr3_4:50563626-50563645 Msa0505180:CDS 45.0%
GGGAACAAGCTTGAAAGAAG+AGG + chr3_4:50563896-50563915 Msa0505180:CDS 45.0%
AGCTAACCAGTCTTGGAGAA+AGG + chr3_4:50564109-50564128 Msa0505180:CDS 45.0%
!!! GGAGAAAGGTTTTGAGCATG+GGG + chr3_4:50564123-50564142 Msa0505180:CDS 45.0%
AGCATGGGGAATCTTCTCAA+TGG + chr3_4:50564137-50564156 Msa0505180:CDS 45.0%
GATTACCACTCACTCTATCG+TGG - chr3_4:50564199-50564218 None:intergenic 45.0%
AATCACTATGCAGCTCGTAG+CGG + chr3_4:50564215-50564234 Msa0505180:CDS 45.0%
TGACCTACGTGTTGCACTTT+CGG + chr3_4:50564292-50564311 Msa0505180:CDS 45.0%
!! TAAATAGTAATATAATTAAA+AGG + chr3_4:50556607-50556626 Msa0505180:intron 5.0%
!! TAAATATTATACAATAAATT+TGG - chr3_4:50558692-50558711 None:intergenic 5.0%
!!! TATATCATTTTAATTATATT+AGG - chr3_4:50558925-50558944 None:intergenic 5.0%
AGGTAGGATCTTCGTCTTGC+CGG - chr3_4:50548665-50548684 None:intergenic 50.0%
GACCATCAGACATCCAAAGC+CGG - chr3_4:50549316-50549335 None:intergenic 50.0%
GGTAAAAGGGGCAGTTCTCT+TGG + chr3_4:50549826-50549845 Msa0505180:intron 50.0%
! GTAGGTTGAGGTTTGGGTTC+AGG + chr3_4:50549962-50549981 Msa0505180:intron 50.0%
!! CTCAACAGTTTGCTAGCCTC+TGG - chr3_4:50550231-50550250 None:intergenic 50.0%
TTCCGAGAAGGATCGTGAAC+TGG - chr3_4:50550388-50550407 None:intergenic 50.0%
! AGCAGATCGCATTGGTAGTC+AGG + chr3_4:50550459-50550478 Msa0505180:five_prime_UTR 50.0%
TCTTACCACTTCCACCCCTA+GGG + chr3_4:50550694-50550713 Msa0505180:intron 50.0%
TCAAGATGTCCCTTCCCTAG+GGG - chr3_4:50550711-50550730 None:intergenic 50.0%
CTCAAGATGTCCCTTCCCTA+GGG - chr3_4:50550712-50550731 None:intergenic 50.0%
TCTCAAGATGTCCCTTCCCT+AGG - chr3_4:50550713-50550732 None:intergenic 50.0%
CAGAACACTCCCCTTTGATG+AGG + chr3_4:50551131-50551150 Msa0505180:five_prime_UTR 50.0%
CACCTCATGAAGCTGAGAAG+TGG + chr3_4:50551995-50552014 Msa0505180:five_prime_UTR 50.0%
CGATCTCTAACAGTCGGTGA+AGG - chr3_4:50552772-50552791 None:intergenic 50.0%
!! GGACAAGGTACTGGTGTCTT+AGG + chr3_4:50552963-50552982 Msa0505180:intron 50.0%
! CGTAGGCAGGTATCGTTCAT+TGG + chr3_4:50553098-50553117 Msa0505180:intron 50.0%
TGATTCCCCCCTTATGAGCT+TGG - chr3_4:50553506-50553525 None:intergenic 50.0%
ACGCCACCTCACACCTAATA+TGG + chr3_4:50553707-50553726 Msa0505180:intron 50.0%
GAGCCATATTAGGTGTGAGG+TGG - chr3_4:50553713-50553732 None:intergenic 50.0%
ACCTACGTCACTCCTAGAAC+CGG + chr3_4:50553747-50553766 Msa0505180:intron 50.0%
CACTCCTAGAACCGGACATT+TGG + chr3_4:50553755-50553774 Msa0505180:intron 50.0%
CGTTCCAAATGTCCGGTTCT+AGG - chr3_4:50553762-50553781 None:intergenic 50.0%
GTGAAACTTAGGTGAGGGTG+TGG + chr3_4:50554132-50554151 Msa0505180:intron 50.0%
TCTTTCCAGTATGCCGATGG+TGG - chr3_4:50554242-50554261 None:intergenic 50.0%
GAATCCCGAATTCAGACGAG+AGG - chr3_4:50554816-50554835 None:intergenic 50.0%
TTTGCTTTGCCGCAGAAGCT+TGG - chr3_4:50555909-50555928 None:intergenic 50.0%
CTTGCAAGCGAGACACTGAA+TGG + chr3_4:50556398-50556417 Msa0505180:intron 50.0%
TTCGAGAGGTTAGGTGGTGT+TGG + chr3_4:50557200-50557219 Msa0505180:five_prime_UTR 50.0%
TCGAGAGGTTAGGTGGTGTT+GGG + chr3_4:50557201-50557220 Msa0505180:five_prime_UTR 50.0%
AATCCTAGACGTGAAGAGGG+AGG - chr3_4:50558203-50558222 None:intergenic 50.0%
! CGTCCTCTCTGGTTCCTATT+GGG - chr3_4:50558289-50558308 None:intergenic 50.0%
! TCGTCCTCTCTGGTTCCTAT+TGG - chr3_4:50558290-50558309 None:intergenic 50.0%
! TTTGGGGCTAGGTTGAGTGA+AGG - chr3_4:50558496-50558515 None:intergenic 50.0%
! TGAAGGAGGGGGTGTGAAAA+GGG - chr3_4:50558541-50558560 None:intergenic 50.0%
! TTGAAGGAGGGGGTGTGAAA+AGG - chr3_4:50558542-50558561 None:intergenic 50.0%
!!! CTTGCTTTTGGGGTTGGGTT+AGG - chr3_4:50558627-50558646 None:intergenic 50.0%
!!! CAAGAGCTTGCTTTTGGGGT+TGG - chr3_4:50558633-50558652 None:intergenic 50.0%
CAACCCCAAAAGCAAGCTCT+TGG + chr3_4:50558631-50558650 Msa0505180:intron 50.0%
!! ACGCCAAGAGCTTGCTTTTG+GGG - chr3_4:50558637-50558656 None:intergenic 50.0%
!! CACGCCAAGAGCTTGCTTTT+GGG - chr3_4:50558638-50558657 None:intergenic 50.0%
!! TCACGCCAAGAGCTTGCTTT+TGG - chr3_4:50558639-50558658 None:intergenic 50.0%
AAAAGCAAGCTCTTGGCGTG+AGG + chr3_4:50558638-50558657 Msa0505180:intron 50.0%
AAAGCAAGCTCTTGGCGTGA+GGG + chr3_4:50558639-50558658 Msa0505180:intron 50.0%
TGGAGAAACCTGTGTGTACG+GGG - chr3_4:50559334-50559353 None:intergenic 50.0%
TCCAACACCCAGACACCATT+TGG + chr3_4:50559350-50559369 Msa0505180:intron 50.0%
GACAAGGCCAAATGGTGTCT+GGG - chr3_4:50559360-50559379 None:intergenic 50.0%
TGACAAGGCCAAATGGTGTC+TGG - chr3_4:50559361-50559380 None:intergenic 50.0%
!! AATCGGTGCTGCAGTGGTAT+AGG + chr3_4:50559678-50559697 Msa0505180:intron 50.0%
AATTGAGTGGCCTGCATCAC+AGG - chr3_4:50559797-50559816 None:intergenic 50.0%
TACATGCAGGTGAATTGGGG+GGG - chr3_4:50559974-50559993 None:intergenic 50.0%
TTCTCGGTGATACGTGGAAG+TGG + chr3_4:50560029-50560048 Msa0505180:intron 50.0%
!! CCATGTGGATTGGAATCCAC+TGG - chr3_4:50561025-50561044 None:intergenic 50.0%
! CCAGTGGATTCCAATCCACA+TGG + chr3_4:50561022-50561041 Msa0505180:intron 50.0%
GTGGCATTCACCTGGAGATT+GGG + chr3_4:50561234-50561253 Msa0505180:CDS 50.0%
TCATCTGCTTCCCAATCTCC+AGG - chr3_4:50561247-50561266 None:intergenic 50.0%
TGATGCTGATCCACTGCTCT+CGG - chr3_4:50561275-50561294 None:intergenic 50.0%
! AAAGATAGTTGGCCTCCACG+TGG + chr3_4:50561322-50561341 Msa0505180:CDS 50.0%
! AAGATAGTTGGCCTCCACGT+GGG + chr3_4:50561323-50561342 Msa0505180:CDS 50.0%
TTAGAAAGCTTCCCACGTGG+AGG - chr3_4:50561337-50561356 None:intergenic 50.0%
CTCTTAGAAAGCTTCCCACG+TGG - chr3_4:50561340-50561359 None:intergenic 50.0%
TGTCGGAGCACGGAAATTTG+TGG + chr3_4:50561362-50561381 Msa0505180:CDS 50.0%
TCTTGGAATGCTGTCCTGCT+CGG + chr3_4:50562228-50562247 Msa0505180:intron 50.0%
TTATGGCAGGCAAGCCAACA+TGG - chr3_4:50562336-50562355 None:intergenic 50.0%
GGCTTGCCTGCCATAATGAA+AGG + chr3_4:50562340-50562359 Msa0505180:intron 50.0%
GGTTGCTTGAGAGACTAAGG+GGG + chr3_4:50562386-50562405 Msa0505180:intron 50.0%
GAGAGAAGAGAGAGAGAGAG+AGG + chr3_4:50562986-50563005 Msa0505180:intron 50.0%
AGAGGAGAGAGAGAGAGAGA+GGG + chr3_4:50563004-50563023 Msa0505180:intron 50.0%
AGAGAGAGAGAGAGAGGGAA+TGG + chr3_4:50563009-50563028 Msa0505180:intron 50.0%
GACGAAGAGAGAAAGGAGAG+AGG + chr3_4:50563043-50563062 Msa0505180:intron 50.0%
CGAAGAGAGAAAGGAGAGAG+GGG + chr3_4:50563045-50563064 Msa0505180:intron 50.0%
GAAGAGAGAAAGGAGAGAGG+GGG + chr3_4:50563046-50563065 Msa0505180:intron 50.0%
AAGAGAGAAAGGAGAGAGGG+GGG + chr3_4:50563047-50563066 Msa0505180:intron 50.0%
CTCAAAGCAGATGCCATGGT+AGG - chr3_4:50563617-50563636 None:intergenic 50.0%
CTACCATGGCATCTGCTTTG+AGG + chr3_4:50563615-50563634 Msa0505180:CDS 50.0%
GCAAGCTTATACGAGCACCA+CGG + chr3_4:50563823-50563842 Msa0505180:CDS 50.0%
! CTCCAAGACTGGTTAGCTGT+GGG - chr3_4:50564107-50564126 None:intergenic 50.0%
! TCTCCAAGACTGGTTAGCTG+TGG - chr3_4:50564108-50564127 None:intergenic 50.0%
ATGGTCACGAACCAATCCTC+AGG + chr3_4:50564156-50564175 Msa0505180:CDS 50.0%
TGGTCACGAACCAATCCTCA+GGG + chr3_4:50564157-50564176 Msa0505180:CDS 50.0%
! CAACCGAAAGTGCAACACGT+AGG - chr3_4:50564298-50564317 None:intergenic 50.0%
GATCTTCGTCTTGCCGGTGT+TGG - chr3_4:50548659-50548678 None:intergenic 55.0%
CCGTTCCCAGGAAGAAGCAA+GGG - chr3_4:50548863-50548882 None:intergenic 55.0%
CCCTTGCTTCTTCCTGGGAA+CGG + chr3_4:50548860-50548879 Msa0505180:five_prime_UTR 55.0%
ACCGTTCCCAGGAAGAAGCA+AGG - chr3_4:50548864-50548883 None:intergenic 55.0%
ATCAAACACGCACCGTTCCC+AGG - chr3_4:50548875-50548894 None:intergenic 55.0%
!! TAGAGGCTGTTTGCCGGCTT+TGG + chr3_4:50549300-50549319 Msa0505180:five_prime_UTR 55.0%
!! TGCCGGCTTTGGATGTCTGA+TGG + chr3_4:50549311-50549330 Msa0505180:five_prime_UTR 55.0%
TCTTGGCATCCAGATGACGC+AGG + chr3_4:50550007-50550026 Msa0505180:intron 55.0%
ACGCAGGCAAGCCTGCAAAT+TGG + chr3_4:50550023-50550042 Msa0505180:five_prime_UTR 55.0%
GTCTTACCACTTCCACCCCT+AGG + chr3_4:50550693-50550712 Msa0505180:intron 55.0%
CATTAAGGGGGGTCGGATGT+GGG - chr3_4:50551423-50551442 None:intergenic 55.0%
GCTGCCACAGGCCAAAACAA+TGG - chr3_4:50552706-50552725 None:intergenic 55.0%
! CCAGGATTTTCAGCTGCCAC+AGG - chr3_4:50552718-50552737 None:intergenic 55.0%
CCTGTGGCAGCTGAAAATCC+TGG + chr3_4:50552715-50552734 Msa0505180:intron 55.0%
ACACCAGTACCTTGTCCCAG+TGG - chr3_4:50552960-50552979 None:intergenic 55.0%
! TGGGGGACTCGACTTTTGTG+TGG - chr3_4:50553405-50553424 None:intergenic 55.0%
!! TCCGGTTCTAGGAGTGACGT+AGG - chr3_4:50553751-50553770 None:intergenic 55.0%
GCCGTCAGAACGTGATTGAC+TGG - chr3_4:50553997-50554016 None:intergenic 55.0%
CGTTCTGACGGCCCAAGTTT+AGG + chr3_4:50554005-50554024 Msa0505180:intron 55.0%
GAAGTCCACCATCGGCATAC+TGG + chr3_4:50554234-50554253 Msa0505180:intron 55.0%
! GATCCGTTAGGTGCCATCCT+AGG - chr3_4:50557244-50557263 None:intergenic 55.0%
TGGCCCAATAGGAACCAGAG+AGG + chr3_4:50558283-50558302 Msa0505180:intron 55.0%
! GCTAGGTTGAGTGAAGGAGC+AGG - chr3_4:50558490-50558509 None:intergenic 55.0%
TATGCATGCCCCGTACACAC+AGG + chr3_4:50559323-50559342 Msa0505180:five_prime_UTR 55.0%
GCCAAATGGTGTCTGGGTGT+TGG - chr3_4:50559354-50559373 None:intergenic 55.0%
ACATGCAGGTGAATTGGGGG+GGG - chr3_4:50559973-50559992 None:intergenic 55.0%
GGTGGCATTCACCTGGAGAT+TGG + chr3_4:50561233-50561252 Msa0505180:CDS 55.0%
GATGATGATCCCGAGAGCAG+TGG + chr3_4:50561262-50561281 Msa0505180:CDS 55.0%
GATGCTGATCCACTGCTCTC+GGG - chr3_4:50561274-50561293 None:intergenic 55.0%
CTCACCTGCTCTTCCTGCTT+CGG + chr3_4:50561402-50561421 Msa0505180:CDS 55.0%
TGTTCCGAAGCAGGAAGAGC+AGG - chr3_4:50561409-50561428 None:intergenic 55.0%
AGAGGCTTCTGTTCCGAAGC+AGG - chr3_4:50561418-50561437 None:intergenic 55.0%
GAGAGGAGAGAGAGAGAGAG+AGG + chr3_4:50563003-50563022 Msa0505180:intron 55.0%
AGGCCTCAAAGCAGATGCCA+TGG - chr3_4:50563621-50563640 None:intergenic 55.0%
! CAAGACTGGTTAGCTGTGGG+AGG - chr3_4:50564104-50564123 None:intergenic 55.0%
CTCCCACAGCTAACCAGTCT+TGG + chr3_4:50564102-50564121 Msa0505180:CDS 55.0%
TCGCTCCACGATAGAGTGAG+TGG + chr3_4:50564191-50564210 Msa0505180:CDS 55.0%
GCGTCATCCTCCACCAACAC+CGG + chr3_4:50548643-50548662 Msa0505180:five_prime_UTR 60.0%
! CTTCGTCTTGCCGGTGTTGG+TGG - chr3_4:50548656-50548675 None:intergenic 60.0%
ACCACTTCCACCCCTAGGGA+AGG + chr3_4:50550698-50550717 Msa0505180:intron 60.0%
CCACTTCCACCCCTAGGGAA+GGG + chr3_4:50550699-50550718 Msa0505180:intron 60.0%
AGATGTCCCTTCCCTAGGGG+TGG - chr3_4:50550708-50550727 None:intergenic 60.0%
GCATTAAGGGGGGTCGGATG+TGG - chr3_4:50551424-50551443 None:intergenic 60.0%
CTGCCACTGGGACAAGGTAC+TGG + chr3_4:50552954-50552973 Msa0505180:intron 60.0%
CAGCCTCCCTCTTCACGTCT+AGG + chr3_4:50558197-50558216 Msa0505180:intron 60.0%
TGAATTGGGGGGGGGTGGTT+AGG - chr3_4:50559964-50559983 None:intergenic 60.0%
CATGCAGGTGAATTGGGGGG+GGG - chr3_4:50559972-50559991 None:intergenic 60.0%
AGAGAAAGGAGAGAGGGGGG+AGG + chr3_4:50563050-50563069 Msa0505180:intron 60.0%
GAGAAAGGAGAGAGGGGGGA+GGG + chr3_4:50563051-50563070 Msa0505180:intron 60.0%
AGAAAGGAGAGAGGGGGGAG+GGG + chr3_4:50563052-50563071 Msa0505180:intron 60.0%
GGGAGGGGAGAGAGAGAGAA+TGG + chr3_4:50563067-50563086 Msa0505180:intron 60.0%
GGTGGCTACTGCCTTCAGAG+CGG + chr3_4:50563520-50563539 Msa0505180:CDS 60.0%
!! CGTCTTGCCGGTGTTGGTGG+AGG - chr3_4:50548653-50548672 None:intergenic 65.0%
GCAGGCTTGCCTGCGTCATC+TGG - chr3_4:50550019-50550038 None:intergenic 65.0%
CCCTTCCCTAGGGGTGGAAG+TGG - chr3_4:50550702-50550721 None:intergenic 65.0%
GGGGGGTCGGATGTGGGAAA+AGG - chr3_4:50551417-50551436 None:intergenic 65.0%
AGCAATCACCGCGGGGGAGA+GGG - chr3_4:50562100-50562119 None:intergenic 65.0%
TCTCCCCCGCGGTGATTGCT+GGG + chr3_4:50562100-50562119 Msa0505180:intron 65.0%
CGTGTCAGCTGCCGCTCTGA+AGG - chr3_4:50563534-50563553 None:intergenic 65.0%
GCAGGTGAATTGGGGGGGGG+TGG - chr3_4:50559969-50559988 None:intergenic 70.0%
ATAGTCCCCCCTCTCCCCCG+CGG + chr3_4:50562089-50562108 Msa0505180:intron 70.0%
AATCACCGCGGGGGAGAGGG+GGG - chr3_4:50562097-50562116 None:intergenic 70.0%
CAATCACCGCGGGGGAGAGG+GGG - chr3_4:50562098-50562117 None:intergenic 70.0%
GCAATCACCGCGGGGGAGAG+GGG - chr3_4:50562099-50562118 None:intergenic 70.0%
CAGCAATCACCGCGGGGGAG+AGG - chr3_4:50562101-50562120 None:intergenic 70.0%
CTCTCCCCCGCGGTGATTGC+TGG + chr3_4:50562099-50562118 Msa0505180:intron 70.0%
TCCGCCCAGCAATCACCGCG+GGG - chr3_4:50562107-50562126 None:intergenic 70.0%
GTCCGCCCAGCAATCACCGC+GGG - chr3_4:50562108-50562127 None:intergenic 70.0%
GGTCCGCCCAGCAATCACCG+CGG - chr3_4:50562109-50562128 None:intergenic 70.0%
CCGCCCAGCAATCACCGCGG+GGG - chr3_4:50562106-50562125 None:intergenic 75.0%
CCCCCGCGGTGATTGCTGGG+CGG + chr3_4:50562103-50562122 Msa0505180:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 50548497 50564397 50548497 ID=Msa0505180;Name=Msa0505180
chr3_4 mRNA 50548497 50564397 50548497 ID=Msa0505180-mRNA-1;Parent=Msa0505180;Name=Msa0505180-mRNA-1;_AED=0.13;_eAED=0.13;_QI=2039|1|1|1|0.85|0.90|22|66|329
chr3_4 exon 50548497 50548741 50548497 ID=Msa0505180-mRNA-1:exon:10909;Parent=Msa0505180-mRNA-1
chr3_4 exon 50548838 50548881 50548838 ID=Msa0505180-mRNA-1:exon:10910;Parent=Msa0505180-mRNA-1
chr3_4 exon 50549286 50549349 50549286 ID=Msa0505180-mRNA-1:exon:10911;Parent=Msa0505180-mRNA-1
chr3_4 exon 50549827 50549941 50549827 ID=Msa0505180-mRNA-1:exon:10912;Parent=Msa0505180-mRNA-1
chr3_4 exon 50550020 50550096 50550020 ID=Msa0505180-mRNA-1:exon:10913;Parent=Msa0505180-mRNA-1
chr3_4 exon 50550186 50550283 50550186 ID=Msa0505180-mRNA-1:exon:10914;Parent=Msa0505180-mRNA-1
chr3_4 exon 50550366 50550537 50550366 ID=Msa0505180-mRNA-1:exon:10915;Parent=Msa0505180-mRNA-1
chr3_4 exon 50551066 50551285 50551066 ID=Msa0505180-mRNA-1:exon:10916;Parent=Msa0505180-mRNA-1
chr3_4 exon 50551920 50552031 50551920 ID=Msa0505180-mRNA-1:exon:10917;Parent=Msa0505180-mRNA-1
chr3_4 exon 50552485 50552594 50552485 ID=Msa0505180-mRNA-1:exon:10918;Parent=Msa0505180-mRNA-1
chr3_4 exon 50552725 50552817 50552725 ID=Msa0505180-mRNA-1:exon:10919;Parent=Msa0505180-mRNA-1
chr3_4 exon 50556916 50557044 50556916 ID=Msa0505180-mRNA-1:exon:10920;Parent=Msa0505180-mRNA-1
chr3_4 exon 50557173 50557306 50557173 ID=Msa0505180-mRNA-1:exon:10921;Parent=Msa0505180-mRNA-1
chr3_4 exon 50557642 50557731 50557642 ID=Msa0505180-mRNA-1:exon:10922;Parent=Msa0505180-mRNA-1
chr3_4 exon 50557843 50557929 50557843 ID=Msa0505180-mRNA-1:exon:10923;Parent=Msa0505180-mRNA-1
chr3_4 exon 50559215 50559344 50559215 ID=Msa0505180-mRNA-1:exon:10924;Parent=Msa0505180-mRNA-1
chr3_4 exon 50559444 50559515 50559444 ID=Msa0505180-mRNA-1:exon:10925;Parent=Msa0505180-mRNA-1
chr3_4 exon 50560578 50560617 50560578 ID=Msa0505180-mRNA-1:exon:10926;Parent=Msa0505180-mRNA-1
chr3_4 exon 50561153 50561465 50561153 ID=Msa0505180-mRNA-1:exon:10927;Parent=Msa0505180-mRNA-1
chr3_4 exon 50563470 50563647 50563470 ID=Msa0505180-mRNA-1:exon:10928;Parent=Msa0505180-mRNA-1
chr3_4 exon 50563718 50563929 50563718 ID=Msa0505180-mRNA-1:exon:10929;Parent=Msa0505180-mRNA-1
chr3_4 exon 50564038 50564397 50564038 ID=Msa0505180-mRNA-1:exon:10930;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50548497 50548741 50548497 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50548838 50548881 50548838 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50549286 50549349 50549286 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50549827 50549941 50549827 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50550020 50550096 50550020 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50550186 50550283 50550186 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50550366 50550537 50550366 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50551066 50551285 50551066 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50551920 50552031 50551920 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50552485 50552594 50552485 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50552725 50552817 50552725 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50556916 50557044 50556916 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50557173 50557306 50557173 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50557642 50557731 50557642 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50557843 50557929 50557843 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50559215 50559344 50559215 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50559444 50559515 50559444 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50560578 50560617 50560578 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 five_prime_UTR 50561153 50561159 50561153 ID=Msa0505180-mRNA-1:five_prime_utr;Parent=Msa0505180-mRNA-1
chr3_4 CDS 50561160 50561465 50561160 ID=Msa0505180-mRNA-1:cds;Parent=Msa0505180-mRNA-1
chr3_4 CDS 50563470 50563647 50563470 ID=Msa0505180-mRNA-1:cds;Parent=Msa0505180-mRNA-1
chr3_4 CDS 50563718 50563929 50563718 ID=Msa0505180-mRNA-1:cds;Parent=Msa0505180-mRNA-1
chr3_4 CDS 50564038 50564331 50564038 ID=Msa0505180-mRNA-1:cds;Parent=Msa0505180-mRNA-1
chr3_4 three_prime_UTR 50564332 50564397 50564332 ID=Msa0505180-mRNA-1:three_prime_utr;Parent=Msa0505180-mRNA-1
Gene Sequence

>Msa0505180

ATGGCTTTGGTGCTATTAGATATGTCAGCATTTAAAGCAGCGAATCCAGATGCTACTTTTGAAGACTTTATTCGGTGGCATTCACCTGGAGATTGGGAAGCAGATGATGATCCCGAGAGCAGTGGATCAGCATCATCTGATTCTCTTGAAAAAAATAAGTTGAAAGATAGTTGGCCTCCACGTGGGAAGCTTTCTAAGAGAATGTCGGAGCACGGAAATTTGTGGAGAAAGATTTGGAATAGCTCACCTGCTCTTCCTGCTTCGGAACAGAAGCCTCTTCTTGATCCAAATAGAGAAGGAGAAAAAGTTCTTCATTATCTTGAAACCTTACGACCACATCAATTGCTTGAACAAATGGTGGCTACTGCCTTCAGAGCGGCAGCTGACACGCTAAGTCAGACTAGTTATGGAGAACTGAAACAGATGGAGACTAAGATTCAACAACTTTATCCTACCATGGCATCTGCTTTGAGGCCTTTACAAGTAAATCGATTGTCTGCAGACAGTGAGACTATTGAAGACTTCAGACGATTGTGTGTTGTTTTTGAACGTGTTGAAAAATTACTGACTGTTGCAGCTTCTCTTCATCGCAAGCTTATACGAGCACCACGGCTCTCAAGAGAAATTTTTAATGATTACTACAACTTTTATATTCCAACAATGGGAACAAGCTTGAAAGAAGAGGTTGTTGAAAAGGAATTTGACAAGAAACAAGCGGTAAGGAACCATGAAAGAGAAGTGTTGTCAAATATGTTTGTTCCTCCCACAGCTAACCAGTCTTGGAGAAAGGTTTTGAGCATGGGGAATCTTCTCAATGGTCACGAACCAATCCTCAGGGAGATTATTTTTTCGCTCCACGATAGAGTGAGTGGTAATCACTATGCAGCTCGTAGCGGTAGTGTTTCTCAAGAAATTGAAACTTACAGAATGTATATATGTGGAACATCTAATGACCTACGTGTTGCACTTTCGGTTGTCTCGTGTGATTAA
Protein sequence

>Msa0505180

MALVLLDMSAFKAANPDATFEDFIRWHSPGDWEADDDPESSGSASSDSLEKNKLKDSWPPRGKLSKRMSEHGNLWRKIWNSSPALPASEQKPLLDPNREGEKVLHYLETLRPHQLLEQMVATAFRAAADTLSQTSYGELKQMETKIQQLYPTMASALRPLQVNRLSADSETIEDFRRLCVVFERVEKLLTVAASLHRKLIRAPRLSREIFNDYYNFYIPTMGTSLKEEVVEKEFDKKQAVRNHEREVLSNMFVPPTANQSWRKVLSMGNLLNGHEPILREIIFSLHDRVSGNHYAARSGSVSQEIETYRMYICGTSNDLRVALSVVSCD*