AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0507110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0507110 MtrunA17_Chr3g0110481 92.935 184 13 0 1 184 1 184 2.28e-111 315
Msa0507110 MtrunA17_Chr5g0434691 63.514 148 48 3 1 146 1 144 2.92e-48 155
Msa0507110 MtrunA17_Chr8g0392851 35.484 217 85 11 14 179 28 240 7.15e-17 77.4
Msa0507110 MtrunA17_Chr6g0482691 49.254 67 31 2 14 77 43 109 6.64e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0507110 AT1G14900.1 43.011 186 92 4 11 184 21 204 3.68e-38 130
Msa0507110 AT1G48620.1 50.000 62 31 0 16 77 78 139 5.99e-14 69.3
Msa0507110 AT3G18035.2 46.575 73 39 0 14 86 66 138 7.19e-14 68.9
Msa0507110 AT3G18035.1 46.575 73 39 0 14 86 66 138 7.34e-14 69.3

Find 92 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAACAATTACACTCTATTT+AGG 0.154977 3_4:-54218473 None:intergenic
TAGAGTGTAATTGTTTAGTT+TGG 0.223116 3_4:+54218479 Msa0507110:three_prime_UTR
CCCCTTCTAGGTGGAGCATT+TGG 0.227173 3_4:-54218112 None:intergenic
AATGTTGTGGATTTCATCTT+TGG 0.248001 3_4:-54218382 None:intergenic
AGTTGGTCGGGACATCTTCC+TGG 0.269146 3_4:-54218290 None:intergenic
GGTCTTCCACGACCCCTTCT+AGG 0.272949 3_4:-54218124 None:intergenic
GGTGGGCCATTTGGATCCTT+TGG 0.296708 3_4:-54218214 None:intergenic
ACAGTGGTGAATTAGTATTT+TGG 0.301089 3_4:+54218065 Msa0507110:CDS
GGAGGCCTTGGTGGGCCATT+TGG 0.307808 3_4:-54218223 None:intergenic
GCCTTCATTTGTGGAGGCCT+TGG 0.322810 3_4:-54218235 None:intergenic
GAAGGATTAAATGAAGAAAA+TGG 0.328424 3_4:+54217941 Msa0507110:CDS
AGAGTGTAATTGTTTAGTTT+GGG 0.338961 3_4:+54218480 Msa0507110:three_prime_UTR
GGAGGACGGCCCTTAGGCTT+GGG 0.344150 3_4:-54218193 None:intergenic
CCAGAGGTAGTGAGAGGCCT+AGG 0.346000 3_4:+54218350 Msa0507110:CDS
TGGAGGACGGCCCTTAGGCT+TGG 0.346021 3_4:-54218194 None:intergenic
CCCTTCTAGGTGGAGCATTT+GGG 0.348663 3_4:-54218111 None:intergenic
CCACCAGATGCCTTCATTTG+TGG 0.351342 3_4:-54218244 None:intergenic
CTTAATGATTGATCATGGTT+TGG 0.365202 3_4:+54218419 Msa0507110:exon
CTTTGACGGACCATTGCCTT+TGG 0.376697 3_4:+54218318 Msa0507110:CDS
AGGAAGATGTCCCGACCAAC+TGG 0.391833 3_4:+54218292 Msa0507110:CDS
TTCTATGTACTTGGATATTG+AGG 0.392170 3_4:-54217975 None:intergenic
ACCCAAATGCTCCACCTAGA+AGG 0.393865 3_4:+54218110 Msa0507110:CDS
GGGCCGACCTCTAGGTCTTC+CGG 0.398607 3_4:-54218269 None:intergenic
TTCATTTGTGGAGGCCTTGG+TGG 0.415060 3_4:-54218232 None:intergenic
GTTGTGGATTTCATCTTTGG+AGG 0.419370 3_4:-54218379 None:intergenic
ATCTTCCTGGGCCGACCTCT+AGG 0.443951 3_4:-54218277 None:intergenic
TAACGCTTAATGATTGATCA+TGG 0.444438 3_4:+54218414 Msa0507110:exon
GTGACTCATGTGAGCTCTGT+TGG 0.445552 3_4:+54218561 Msa0507110:three_prime_UTR
AGGCTTGGGTGGTGAGTACA+TGG 0.445822 3_4:-54218179 None:intergenic
CATTTGGATCCTTTGGAGGA+CGG 0.462369 3_4:-54218207 None:intergenic
TCATTTGTGGAGGCCTTGGT+GGG 0.465489 3_4:-54218231 None:intergenic
GTATGTGGATTCTATGTACT+TGG 0.467423 3_4:-54217984 None:intergenic
CGACCAACTGGAGCCTTTGA+CGG 0.467722 3_4:+54218304 Msa0507110:CDS
GTCAAAGGCTCCAGTTGGTC+GGG 0.478079 3_4:-54218302 None:intergenic
GTACTCACCACCCAAGCCTA+AGG 0.483156 3_4:+54218183 Msa0507110:CDS
TCCTTTGGAGGACGGCCCTT+AGG 0.487147 3_4:-54218199 None:intergenic
CCTCCACAAATGAAGGCATC+TGG 0.489333 3_4:+54218241 Msa0507110:CDS
AAATTTACCTCACGGTAAGA+TGG 0.491197 3_4:-54216872 None:intergenic
ACCAAGGCCTCCACAAATGA+AGG 0.493608 3_4:+54218234 Msa0507110:CDS
TGGAGCATTTGGGTCACGCC+TGG 0.499986 3_4:-54218101 None:intergenic
ATGAAGGCATCTGGTGGGAC+CGG 0.505619 3_4:+54218250 Msa0507110:CDS
CCCAAATGCTCCACCTAGAA+GGG 0.508074 3_4:+54218111 Msa0507110:CDS
CCTAGGCCTCTCACTACCTC+TGG 0.508223 3_4:-54218350 None:intergenic
GGGCCATTTGGATCCTTTGG+AGG 0.508423 3_4:-54218211 None:intergenic
ACTTGCACCTTGCAAGAATG+AGG 0.510068 3_4:+54218041 Msa0507110:CDS
ATCTTTGGAGGCCTACCCCT+AGG 0.510686 3_4:-54218367 None:intergenic
CGTCAAAGGCTCCAGTTGGT+CGG 0.510698 3_4:-54218303 None:intergenic
CACTGTCCCTCATTCTTGCA+AGG 0.512464 3_4:-54218048 None:intergenic
CGGTAAGATGGAAGTGAAAG+AGG 0.513286 3_4:-54216860 None:intergenic
GGACCATTGCCTTTGGCCGT+AGG 0.515325 3_4:+54218325 Msa0507110:CDS
GACCATTGCCTTTGGCCGTA+GGG 0.521053 3_4:+54218326 Msa0507110:CDS
GTCCCTACGGCCAAAGGCAA+TGG 0.527581 3_4:-54218328 None:intergenic
GTTGGTCGGGACATCTTCCT+GGG 0.529344 3_4:-54218289 None:intergenic
GAAGACCTAGAGGTCGGCCC+AGG 0.529611 3_4:+54218272 Msa0507110:CDS
TTGAGGTAATCCACCGTATG+TGG 0.529780 3_4:-54217999 None:intergenic
GGTGGTGAGTACATGGCTCC+TGG 0.537339 3_4:-54218172 None:intergenic
GCCTAAGGGCCGTCCTCCAA+AGG 0.547952 3_4:+54218198 Msa0507110:CDS
CAAAGGCAATGGTCCGTCAA+AGG 0.549632 3_4:-54218317 None:intergenic
CAGAGGTAGTGAGAGGCCTA+GGG 0.551309 3_4:+54218351 Msa0507110:CDS
CCAGATGCCTTCATTTGTGG+AGG 0.554296 3_4:-54218241 None:intergenic
CGTCCTCCAAAGGATCCAAA+TGG 0.558781 3_4:+54218208 Msa0507110:CDS
GTTAATTTCAGCCAATGTTG+TGG 0.559261 3_4:-54218395 None:intergenic
GCTCCACCTAGAAGGGGTCG+TGG 0.572176 3_4:+54218118 Msa0507110:CDS
GAGTGTAATTGTTTAGTTTG+GGG 0.572457 3_4:+54218481 Msa0507110:three_prime_UTR
AGTGTAATTGTTTAGTTTGG+GGG 0.574536 3_4:+54218482 Msa0507110:three_prime_UTR
GGACGGCCCTTAGGCTTGGG+TGG 0.575169 3_4:-54218190 None:intergenic
AAAGATGAAATCCACAACAT+TGG 0.578833 3_4:+54218384 Msa0507110:CDS
CCTCTGGTCCCTACGGCCAA+AGG 0.580441 3_4:-54218334 None:intergenic
CCACAAATGAAGGCATCTGG+TGG 0.581160 3_4:+54218244 Msa0507110:CDS
CTCACTACCTCTGGTCCCTA+CGG 0.592042 3_4:-54218341 None:intergenic
TACTCACCACCCAAGCCTAA+GGG 0.596659 3_4:+54218184 Msa0507110:CDS
AAAGACTCTTTAGCCTTGGG+TGG 0.601047 3_4:-54218145 None:intergenic
AGTAGTGCCTTGTGTCCTTG+AGG 0.601440 3_4:-54218016 None:intergenic
GTAGTGAGAGGCCTAGGGGT+AGG 0.610738 3_4:+54218356 Msa0507110:CDS
CCTTTGGCCGTAGGGACCAG+AGG 0.610832 3_4:+54218334 Msa0507110:CDS
CACAAATGAAGGCATCTGGT+GGG 0.625831 3_4:+54218245 Msa0507110:CDS
TTCACTTCCATCTTACCGTG+AGG 0.629029 3_4:+54216865 Msa0507110:CDS
CTTCCACGACCCCTTCTAGG+TGG 0.632258 3_4:-54218121 None:intergenic
GGACCGGAAGACCTAGAGGT+CGG 0.633381 3_4:+54218266 Msa0507110:CDS
GGGTCGTGGAAGACCACCCA+AGG 0.638128 3_4:+54218132 Msa0507110:CDS
CTTGCACCTTGCAAGAATGA+GGG 0.643739 3_4:+54218042 Msa0507110:CDS
GGTCCGTCAAAGGCTCCAGT+TGG 0.647573 3_4:-54218307 None:intergenic
TAGGGACCAGAGGTAGTGAG+AGG 0.649329 3_4:+54218344 Msa0507110:CDS
TGGATTACCTCAAGGACACA+AGG 0.652707 3_4:+54218009 Msa0507110:CDS
AAGTACATAGAATCCACATA+CGG 0.657762 3_4:+54217986 Msa0507110:CDS
TACATAGAATCCACATACGG+TGG 0.665446 3_4:+54217989 Msa0507110:CDS
ACATACGGTGGATTACCTCA+AGG 0.666401 3_4:+54218001 Msa0507110:CDS
CCAAATGCTCCACCTAGAAG+GGG 0.671648 3_4:+54218112 Msa0507110:CDS
AGGATCCAAATGGCCCACCA+AGG 0.671712 3_4:+54218218 Msa0507110:CDS
GGTGGGACCGGAAGACCTAG+AGG 0.673911 3_4:+54218262 Msa0507110:CDS
CTTGCAAGAATGAGGGACAG+TGG 0.678671 3_4:+54218049 Msa0507110:CDS
AGAGGTAGTGAGAGGCCTAG+GGG 0.682501 3_4:+54218352 Msa0507110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAATATTTAATTAAT+TGG + chr3_4:54217378-54217397 Msa0507110:intron 0.0%
!! ATAAAAATATTTAATTAATT+GGG + chr3_4:54217379-54217398 Msa0507110:intron 0.0%
!! AATAAAAATATTTAATTAAT+TGG + chr3_4:54217378-54217397 Msa0507110:intron 0.0%
!! ATAAAAATATTTAATTAATT+GGG + chr3_4:54217379-54217398 Msa0507110:intron 0.0%
!! TAAAGATATAAACTTAATTA+AGG - chr3_4:54217233-54217252 None:intergenic 10.0%
!! TTATAAATTCATTAAACAAT+AGG - chr3_4:54217416-54217435 None:intergenic 10.0%
!! AAATATTAGTATTACTTTAA+AGG + chr3_4:54217597-54217616 Msa0507110:intron 10.0%
!! TAAAGATATAAACTTAATTA+AGG - chr3_4:54217233-54217252 None:intergenic 10.0%
!! TTATAAATTCATTAAACAAT+AGG - chr3_4:54217416-54217435 None:intergenic 10.0%
!! AAATATTAGTATTACTTTAA+AGG + chr3_4:54217597-54217616 Msa0507110:intron 10.0%
!! TAAAATACTAATGAAAAAGA+GGG - chr3_4:54216905-54216924 None:intergenic 15.0%
!! ATAAAATACTAATGAAAAAG+AGG - chr3_4:54216906-54216925 None:intergenic 15.0%
!!! AATTTTAGATTACAAATATG+TGG + chr3_4:54217299-54217318 Msa0507110:intron 15.0%
!! TGTTTAATGAATTTATAACA+AGG + chr3_4:54217418-54217437 Msa0507110:intron 15.0%
!!! TTTTTTTTTTTGTGATGTTT+GGG - chr3_4:54217499-54217518 None:intergenic 15.0%
!!! ATTTTTTTTTTTGTGATGTT+TGG - chr3_4:54217500-54217519 None:intergenic 15.0%
!!! CTTTTCAATTTTTAATGAAT+TGG - chr3_4:54217681-54217700 None:intergenic 15.0%
!! TTTGAAAATTGTAAAAATTG+TGG + chr3_4:54218584-54218603 Msa0507110:three_prime_UTR 15.0%
!! TAAAATACTAATGAAAAAGA+GGG - chr3_4:54216905-54216924 None:intergenic 15.0%
!! ATAAAATACTAATGAAAAAG+AGG - chr3_4:54216906-54216925 None:intergenic 15.0%
!!! AATTTTAGATTACAAATATG+TGG + chr3_4:54217299-54217318 Msa0507110:intron 15.0%
!! TGTTTAATGAATTTATAACA+AGG + chr3_4:54217418-54217437 Msa0507110:intron 15.0%
!!! TTTTTTTTTTTGTGATGTTT+GGG - chr3_4:54217499-54217518 None:intergenic 15.0%
!!! ATTTTTTTTTTTGTGATGTT+TGG - chr3_4:54217500-54217519 None:intergenic 15.0%
!!! CTTTTCAATTTTTAATGAAT+TGG - chr3_4:54217681-54217700 None:intergenic 15.0%
!! TTTGAAAATTGTAAAAATTG+TGG + chr3_4:54218584-54218603 Msa0507110:three_prime_UTR 15.0%
!! TAAACATGTGATTAATGAAA+TGG - chr3_4:54217065-54217084 None:intergenic 20.0%
!!! AAAGAAGTTAGTGAATATTT+TGG - chr3_4:54217161-54217180 None:intergenic 20.0%
!!! TTTTTTTTTTGTGATGTTTG+GGG - chr3_4:54217498-54217517 None:intergenic 20.0%
!! TAAACAATTACACTCTATTT+AGG - chr3_4:54218476-54218495 None:intergenic 20.0%
!! TAAACATGTGATTAATGAAA+TGG - chr3_4:54217065-54217084 None:intergenic 20.0%
!!! AAAGAAGTTAGTGAATATTT+TGG - chr3_4:54217161-54217180 None:intergenic 20.0%
!!! TTTTTTTTTTGTGATGTTTG+GGG - chr3_4:54217498-54217517 None:intergenic 20.0%
!! TAAACAATTACACTCTATTT+AGG - chr3_4:54218476-54218495 None:intergenic 20.0%
!! AACTCTTCTATCAACTTTTA+TGG + chr3_4:54216814-54216833 Msa0507110:exon 25.0%
! TCATTAAACAATAGGCTTAT+GGG - chr3_4:54217408-54217427 None:intergenic 25.0%
! TTCATTAAACAATAGGCTTA+TGG - chr3_4:54217409-54217428 None:intergenic 25.0%
!! TTACTTTAAAGGTAAATGCT+AGG + chr3_4:54217608-54217627 Msa0507110:intron 25.0%
!! TACTTTAAAGGTAAATGCTA+GGG + chr3_4:54217609-54217628 Msa0507110:intron 25.0%
!! TTTAACTGTGATTAGTTGAT+GGG + chr3_4:54217823-54217842 Msa0507110:intron 25.0%
!!! CATTTTTCAGATGATTTTGA+AGG + chr3_4:54217913-54217932 Msa0507110:intron 25.0%
! GAAGGATTAAATGAAGAAAA+TGG + chr3_4:54217941-54217960 Msa0507110:CDS 25.0%
! TAGAGTGTAATTGTTTAGTT+TGG + chr3_4:54218479-54218498 Msa0507110:three_prime_UTR 25.0%
!! AGAGTGTAATTGTTTAGTTT+GGG + chr3_4:54218480-54218499 Msa0507110:three_prime_UTR 25.0%
!! AACTCTTCTATCAACTTTTA+TGG + chr3_4:54216814-54216833 Msa0507110:exon 25.0%
! TCATTAAACAATAGGCTTAT+GGG - chr3_4:54217408-54217427 None:intergenic 25.0%
! TTCATTAAACAATAGGCTTA+TGG - chr3_4:54217409-54217428 None:intergenic 25.0%
!! TTACTTTAAAGGTAAATGCT+AGG + chr3_4:54217608-54217627 Msa0507110:intron 25.0%
!! TACTTTAAAGGTAAATGCTA+GGG + chr3_4:54217609-54217628 Msa0507110:intron 25.0%
!! TTTAACTGTGATTAGTTGAT+GGG + chr3_4:54217823-54217842 Msa0507110:intron 25.0%
!!! CATTTTTCAGATGATTTTGA+AGG + chr3_4:54217913-54217932 Msa0507110:intron 25.0%
! GAAGGATTAAATGAAGAAAA+TGG + chr3_4:54217941-54217960 Msa0507110:CDS 25.0%
! TAGAGTGTAATTGTTTAGTT+TGG + chr3_4:54218479-54218498 Msa0507110:three_prime_UTR 25.0%
!! AGAGTGTAATTGTTTAGTTT+GGG + chr3_4:54218480-54218499 Msa0507110:three_prime_UTR 25.0%
!!! GTTTTGAAGATTTACAACCT+CGG - chr3_4:54216797-54216816 None:intergenic 30.0%
GTTAGTTGAAATTTACCTCA+CGG - chr3_4:54216883-54216902 None:intergenic 30.0%
! TATTAGTCTATGCTAATCAG+CGG - chr3_4:54216945-54216964 None:intergenic 30.0%
GTGATTAATGAAATGGTCAA+AGG - chr3_4:54217058-54217077 None:intergenic 30.0%
AAATATGTGGAGTTAGAGAA+AGG + chr3_4:54217312-54217331 Msa0507110:intron 30.0%
CATTAAACAATAGGCTTATG+GGG - chr3_4:54217407-54217426 None:intergenic 30.0%
GACAATGCAGAATATATGTA+AGG + chr3_4:54217459-54217478 Msa0507110:intron 30.0%
!!! AGAATGTCTAAAGAGTGTTT+TGG + chr3_4:54217733-54217752 Msa0507110:intron 30.0%
!!! GAATGTCTAAAGAGTGTTTT+GGG + chr3_4:54217734-54217753 Msa0507110:intron 30.0%
! GTTTAACTGTGATTAGTTGA+TGG + chr3_4:54217822-54217841 Msa0507110:intron 30.0%
!! ATGATTTTGAAGGCAATAGA+AGG + chr3_4:54217923-54217942 Msa0507110:CDS 30.0%
TTCTATGTACTTGGATATTG+AGG - chr3_4:54217978-54217997 None:intergenic 30.0%
AAGTACATAGAATCCACATA+CGG + chr3_4:54217986-54218005 Msa0507110:CDS 30.0%
! ACAGTGGTGAATTAGTATTT+TGG + chr3_4:54218065-54218084 Msa0507110:CDS 30.0%
AATGTTGTGGATTTCATCTT+TGG - chr3_4:54218385-54218404 None:intergenic 30.0%
AAAGATGAAATCCACAACAT+TGG + chr3_4:54218384-54218403 Msa0507110:CDS 30.0%
TAACGCTTAATGATTGATCA+TGG + chr3_4:54218414-54218433 Msa0507110:exon 30.0%
CTTAATGATTGATCATGGTT+TGG + chr3_4:54218419-54218438 Msa0507110:exon 30.0%
!! GAGTGTAATTGTTTAGTTTG+GGG + chr3_4:54218481-54218500 Msa0507110:three_prime_UTR 30.0%
!! AGTGTAATTGTTTAGTTTGG+GGG + chr3_4:54218482-54218501 Msa0507110:three_prime_UTR 30.0%
!!! GTTTTGAAGATTTACAACCT+CGG - chr3_4:54216797-54216816 None:intergenic 30.0%
GTTAGTTGAAATTTACCTCA+CGG - chr3_4:54216883-54216902 None:intergenic 30.0%
! TATTAGTCTATGCTAATCAG+CGG - chr3_4:54216945-54216964 None:intergenic 30.0%
GTGATTAATGAAATGGTCAA+AGG - chr3_4:54217058-54217077 None:intergenic 30.0%
AAATATGTGGAGTTAGAGAA+AGG + chr3_4:54217312-54217331 Msa0507110:intron 30.0%
CATTAAACAATAGGCTTATG+GGG - chr3_4:54217407-54217426 None:intergenic 30.0%
GACAATGCAGAATATATGTA+AGG + chr3_4:54217459-54217478 Msa0507110:intron 30.0%
!!! AGAATGTCTAAAGAGTGTTT+TGG + chr3_4:54217733-54217752 Msa0507110:intron 30.0%
!!! GAATGTCTAAAGAGTGTTTT+GGG + chr3_4:54217734-54217753 Msa0507110:intron 30.0%
! GTTTAACTGTGATTAGTTGA+TGG + chr3_4:54217822-54217841 Msa0507110:intron 30.0%
!! ATGATTTTGAAGGCAATAGA+AGG + chr3_4:54217923-54217942 Msa0507110:CDS 30.0%
TTCTATGTACTTGGATATTG+AGG - chr3_4:54217978-54217997 None:intergenic 30.0%
AAGTACATAGAATCCACATA+CGG + chr3_4:54217986-54218005 Msa0507110:CDS 30.0%
! ACAGTGGTGAATTAGTATTT+TGG + chr3_4:54218065-54218084 Msa0507110:CDS 30.0%
AATGTTGTGGATTTCATCTT+TGG - chr3_4:54218385-54218404 None:intergenic 30.0%
AAAGATGAAATCCACAACAT+TGG + chr3_4:54218384-54218403 Msa0507110:CDS 30.0%
TAACGCTTAATGATTGATCA+TGG + chr3_4:54218414-54218433 Msa0507110:exon 30.0%
CTTAATGATTGATCATGGTT+TGG + chr3_4:54218419-54218438 Msa0507110:exon 30.0%
!! GAGTGTAATTGTTTAGTTTG+GGG + chr3_4:54218481-54218500 Msa0507110:three_prime_UTR 30.0%
!! AGTGTAATTGTTTAGTTTGG+GGG + chr3_4:54218482-54218501 Msa0507110:three_prime_UTR 30.0%
!!! TTGTTTTTTCTGAAGATCCG+AGG + chr3_4:54216777-54216796 Msa0507110:five_prime_UTR 35.0%
! CTATCAACTTTTATGGCTAC+TGG + chr3_4:54216821-54216840 Msa0507110:exon 35.0%
AAATTTACCTCACGGTAAGA+TGG - chr3_4:54216875-54216894 None:intergenic 35.0%
! GTTTCTGTTCGAGATTTTGT+TGG + chr3_4:54216968-54216987 Msa0507110:intron 35.0%
ATATATTCTGCATTGTCCTG+AGG - chr3_4:54217456-54217475 None:intergenic 35.0%
TGCAGAATATATGTAAGGTC+TGG + chr3_4:54217464-54217483 Msa0507110:intron 35.0%
GCAGAATATATGTAAGGTCT+GGG + chr3_4:54217465-54217484 Msa0507110:intron 35.0%
CAGAATATATGTAAGGTCTG+GGG + chr3_4:54217466-54217485 Msa0507110:intron 35.0%
GTATGTGGATTCTATGTACT+TGG - chr3_4:54217987-54218006 None:intergenic 35.0%
TTTGGAAAAACAACTACACC+AGG + chr3_4:54218083-54218102 Msa0507110:CDS 35.0%
! GAAAAAGACTCTTTAGCCTT+GGG - chr3_4:54218151-54218170 None:intergenic 35.0%
GTTAATTTCAGCCAATGTTG+TGG - chr3_4:54218398-54218417 None:intergenic 35.0%
!!! TTGTTTTTTCTGAAGATCCG+AGG + chr3_4:54216777-54216796 Msa0507110:five_prime_UTR 35.0%
! CTATCAACTTTTATGGCTAC+TGG + chr3_4:54216821-54216840 Msa0507110:exon 35.0%
AAATTTACCTCACGGTAAGA+TGG - chr3_4:54216875-54216894 None:intergenic 35.0%
! GTTTCTGTTCGAGATTTTGT+TGG + chr3_4:54216968-54216987 Msa0507110:intron 35.0%
ATATATTCTGCATTGTCCTG+AGG - chr3_4:54217456-54217475 None:intergenic 35.0%
TGCAGAATATATGTAAGGTC+TGG + chr3_4:54217464-54217483 Msa0507110:intron 35.0%
GCAGAATATATGTAAGGTCT+GGG + chr3_4:54217465-54217484 Msa0507110:intron 35.0%
CAGAATATATGTAAGGTCTG+GGG + chr3_4:54217466-54217485 Msa0507110:intron 35.0%
GTATGTGGATTCTATGTACT+TGG - chr3_4:54217987-54218006 None:intergenic 35.0%
TTTGGAAAAACAACTACACC+AGG + chr3_4:54218083-54218102 Msa0507110:CDS 35.0%
! GAAAAAGACTCTTTAGCCTT+GGG - chr3_4:54218151-54218170 None:intergenic 35.0%
GTTAATTTCAGCCAATGTTG+TGG - chr3_4:54218398-54218417 None:intergenic 35.0%
! AACTTTTATGGCTACTGGAG+TGG + chr3_4:54216826-54216845 Msa0507110:exon 40.0%
! GAGATTTTGTTGGACACACA+AGG + chr3_4:54216978-54216997 Msa0507110:intron 40.0%
ATTGTCCTGAGGTAATCTCA+AGG - chr3_4:54217445-54217464 None:intergenic 40.0%
!!! TAAAGAGTGTTTTGGGACAC+TGG + chr3_4:54217741-54217760 Msa0507110:intron 40.0%
TACATAGAATCCACATACGG+TGG + chr3_4:54217989-54218008 Msa0507110:CDS 40.0%
CGAAAAAGACTCTTTAGCCT+TGG - chr3_4:54218152-54218171 None:intergenic 40.0%
GTTGTGGATTTCATCTTTGG+AGG - chr3_4:54218382-54218401 None:intergenic 40.0%
! AACTTTTATGGCTACTGGAG+TGG + chr3_4:54216826-54216845 Msa0507110:exon 40.0%
! GAGATTTTGTTGGACACACA+AGG + chr3_4:54216978-54216997 Msa0507110:intron 40.0%
ATTGTCCTGAGGTAATCTCA+AGG - chr3_4:54217445-54217464 None:intergenic 40.0%
!!! TAAAGAGTGTTTTGGGACAC+TGG + chr3_4:54217741-54217760 Msa0507110:intron 40.0%
TACATAGAATCCACATACGG+TGG + chr3_4:54217989-54218008 Msa0507110:CDS 40.0%
CGAAAAAGACTCTTTAGCCT+TGG - chr3_4:54218152-54218171 None:intergenic 40.0%
GTTGTGGATTTCATCTTTGG+AGG - chr3_4:54218382-54218401 None:intergenic 40.0%
CGGTAAGATGGAAGTGAAAG+AGG - chr3_4:54216863-54216882 None:intergenic 45.0%
TTCACTTCCATCTTACCGTG+AGG + chr3_4:54216865-54216884 Msa0507110:CDS 45.0%
AAGGTCCTTGAGATTACCTC+AGG + chr3_4:54217437-54217456 Msa0507110:intron 45.0%
AAAGGTAAATGCTAGGGCAC+TGG + chr3_4:54217615-54217634 Msa0507110:intron 45.0%
TTGAGGTAATCCACCGTATG+TGG - chr3_4:54218002-54218021 None:intergenic 45.0%
!! ACATACGGTGGATTACCTCA+AGG + chr3_4:54218001-54218020 Msa0507110:CDS 45.0%
TGGATTACCTCAAGGACACA+AGG + chr3_4:54218009-54218028 Msa0507110:CDS 45.0%
ACTTGCACCTTGCAAGAATG+AGG + chr3_4:54218041-54218060 Msa0507110:CDS 45.0%
CTTGCACCTTGCAAGAATGA+GGG + chr3_4:54218042-54218061 Msa0507110:CDS 45.0%
!! AAAGACTCTTTAGCCTTGGG+TGG - chr3_4:54218148-54218167 None:intergenic 45.0%
!! GCTAAAGAGTCTTTTTCGCC+AGG + chr3_4:54218154-54218173 Msa0507110:CDS 45.0%
! CATTTGGATCCTTTGGAGGA+CGG - chr3_4:54218210-54218229 None:intergenic 45.0%
!! CACAAATGAAGGCATCTGGT+GGG + chr3_4:54218245-54218264 Msa0507110:CDS 45.0%
CGGTAAGATGGAAGTGAAAG+AGG - chr3_4:54216863-54216882 None:intergenic 45.0%
TTCACTTCCATCTTACCGTG+AGG + chr3_4:54216865-54216884 Msa0507110:CDS 45.0%
AAGGTCCTTGAGATTACCTC+AGG + chr3_4:54217437-54217456 Msa0507110:intron 45.0%
AAAGGTAAATGCTAGGGCAC+TGG + chr3_4:54217615-54217634 Msa0507110:intron 45.0%
TTGAGGTAATCCACCGTATG+TGG - chr3_4:54218002-54218021 None:intergenic 45.0%
!! ACATACGGTGGATTACCTCA+AGG + chr3_4:54218001-54218020 Msa0507110:CDS 45.0%
TGGATTACCTCAAGGACACA+AGG + chr3_4:54218009-54218028 Msa0507110:CDS 45.0%
ACTTGCACCTTGCAAGAATG+AGG + chr3_4:54218041-54218060 Msa0507110:CDS 45.0%
CTTGCACCTTGCAAGAATGA+GGG + chr3_4:54218042-54218061 Msa0507110:CDS 45.0%
!! AAAGACTCTTTAGCCTTGGG+TGG - chr3_4:54218148-54218167 None:intergenic 45.0%
!! GCTAAAGAGTCTTTTTCGCC+AGG + chr3_4:54218154-54218173 Msa0507110:CDS 45.0%
! CATTTGGATCCTTTGGAGGA+CGG - chr3_4:54218210-54218229 None:intergenic 45.0%
!! CACAAATGAAGGCATCTGGT+GGG + chr3_4:54218245-54218264 Msa0507110:CDS 45.0%
!!! TAATTAAATATTTTTATTGT+TGG - chr3_4:54217376-54217395 None:intergenic 5.0%
!! AATATTATTAATTAAAGTAA+GGG - chr3_4:54217776-54217795 None:intergenic 5.0%
!! AAATATTATTAATTAAAGTA+AGG - chr3_4:54217777-54217796 None:intergenic 5.0%
!!! TAATTAAATATTTTTATTGT+TGG - chr3_4:54217376-54217395 None:intergenic 5.0%
!! AATATTATTAATTAAAGTAA+GGG - chr3_4:54217776-54217795 None:intergenic 5.0%
!! AAATATTATTAATTAAAGTA+AGG - chr3_4:54217777-54217796 None:intergenic 5.0%
!! AAATGCTAGGGCACTGGCTA+AGG + chr3_4:54217621-54217640 Msa0507110:intron 50.0%
AGTAGTGCCTTGTGTCCTTG+AGG - chr3_4:54218019-54218038 None:intergenic 50.0%
CACTGTCCCTCATTCTTGCA+AGG - chr3_4:54218051-54218070 None:intergenic 50.0%
CTTGCAAGAATGAGGGACAG+TGG + chr3_4:54218049-54218068 Msa0507110:CDS 50.0%
ACCCAAATGCTCCACCTAGA+AGG + chr3_4:54218110-54218129 Msa0507110:CDS 50.0%
! CCCTTCTAGGTGGAGCATTT+GGG - chr3_4:54218114-54218133 None:intergenic 50.0%
CCCAAATGCTCCACCTAGAA+GGG + chr3_4:54218111-54218130 Msa0507110:CDS 50.0%
CCAAATGCTCCACCTAGAAG+GGG + chr3_4:54218112-54218131 Msa0507110:CDS 50.0%
TACTCACCACCCAAGCCTAA+GGG + chr3_4:54218184-54218203 Msa0507110:CDS 50.0%
CGTCCTCCAAAGGATCCAAA+TGG + chr3_4:54218208-54218227 Msa0507110:CDS 50.0%
TCATTTGTGGAGGCCTTGGT+GGG - chr3_4:54218234-54218253 None:intergenic 50.0%
TTCATTTGTGGAGGCCTTGG+TGG - chr3_4:54218235-54218254 None:intergenic 50.0%
ACCAAGGCCTCCACAAATGA+AGG + chr3_4:54218234-54218253 Msa0507110:CDS 50.0%
CCAGATGCCTTCATTTGTGG+AGG - chr3_4:54218244-54218263 None:intergenic 50.0%
!! CCTCCACAAATGAAGGCATC+TGG + chr3_4:54218241-54218260 Msa0507110:CDS 50.0%
CCACCAGATGCCTTCATTTG+TGG - chr3_4:54218247-54218266 None:intergenic 50.0%
!! CCACAAATGAAGGCATCTGG+TGG + chr3_4:54218244-54218263 Msa0507110:CDS 50.0%
CAAAGGCAATGGTCCGTCAA+AGG - chr3_4:54218320-54218339 None:intergenic 50.0%
! CTTTGACGGACCATTGCCTT+TGG + chr3_4:54218318-54218337 Msa0507110:CDS 50.0%
GTGACTCATGTGAGCTCTGT+TGG + chr3_4:54218561-54218580 Msa0507110:three_prime_UTR 50.0%
!! AAATGCTAGGGCACTGGCTA+AGG + chr3_4:54217621-54217640 Msa0507110:intron 50.0%
AGTAGTGCCTTGTGTCCTTG+AGG - chr3_4:54218019-54218038 None:intergenic 50.0%
CACTGTCCCTCATTCTTGCA+AGG - chr3_4:54218051-54218070 None:intergenic 50.0%
CTTGCAAGAATGAGGGACAG+TGG + chr3_4:54218049-54218068 Msa0507110:CDS 50.0%
ACCCAAATGCTCCACCTAGA+AGG + chr3_4:54218110-54218129 Msa0507110:CDS 50.0%
! CCCTTCTAGGTGGAGCATTT+GGG - chr3_4:54218114-54218133 None:intergenic 50.0%
CCCAAATGCTCCACCTAGAA+GGG + chr3_4:54218111-54218130 Msa0507110:CDS 50.0%
CCAAATGCTCCACCTAGAAG+GGG + chr3_4:54218112-54218131 Msa0507110:CDS 50.0%
TACTCACCACCCAAGCCTAA+GGG + chr3_4:54218184-54218203 Msa0507110:CDS 50.0%
CGTCCTCCAAAGGATCCAAA+TGG + chr3_4:54218208-54218227 Msa0507110:CDS 50.0%
TCATTTGTGGAGGCCTTGGT+GGG - chr3_4:54218234-54218253 None:intergenic 50.0%
TTCATTTGTGGAGGCCTTGG+TGG - chr3_4:54218235-54218254 None:intergenic 50.0%
ACCAAGGCCTCCACAAATGA+AGG + chr3_4:54218234-54218253 Msa0507110:CDS 50.0%
CCAGATGCCTTCATTTGTGG+AGG - chr3_4:54218244-54218263 None:intergenic 50.0%
!! CCTCCACAAATGAAGGCATC+TGG + chr3_4:54218241-54218260 Msa0507110:CDS 50.0%
CCACCAGATGCCTTCATTTG+TGG - chr3_4:54218247-54218266 None:intergenic 50.0%
!! CCACAAATGAAGGCATCTGG+TGG + chr3_4:54218244-54218263 Msa0507110:CDS 50.0%
CAAAGGCAATGGTCCGTCAA+AGG - chr3_4:54218320-54218339 None:intergenic 50.0%
! CTTTGACGGACCATTGCCTT+TGG + chr3_4:54218318-54218337 Msa0507110:CDS 50.0%
GTGACTCATGTGAGCTCTGT+TGG + chr3_4:54218561-54218580 Msa0507110:three_prime_UTR 50.0%
! CCCCTTCTAGGTGGAGCATT+TGG - chr3_4:54218115-54218134 None:intergenic 55.0%
AGGCTTGGGTGGTGAGTACA+TGG - chr3_4:54218182-54218201 None:intergenic 55.0%
GTACTCACCACCCAAGCCTA+AGG + chr3_4:54218183-54218202 Msa0507110:CDS 55.0%
GGGCCATTTGGATCCTTTGG+AGG - chr3_4:54218214-54218233 None:intergenic 55.0%
GGTGGGCCATTTGGATCCTT+TGG - chr3_4:54218217-54218236 None:intergenic 55.0%
AGGATCCAAATGGCCCACCA+AGG + chr3_4:54218218-54218237 Msa0507110:CDS 55.0%
GCCTTCATTTGTGGAGGCCT+TGG - chr3_4:54218238-54218257 None:intergenic 55.0%
!! ATGAAGGCATCTGGTGGGAC+CGG + chr3_4:54218250-54218269 Msa0507110:CDS 55.0%
GTTGGTCGGGACATCTTCCT+GGG - chr3_4:54218292-54218311 None:intergenic 55.0%
AGTTGGTCGGGACATCTTCC+TGG - chr3_4:54218293-54218312 None:intergenic 55.0%
AGGAAGATGTCCCGACCAAC+TGG + chr3_4:54218292-54218311 Msa0507110:CDS 55.0%
GTCAAAGGCTCCAGTTGGTC+GGG - chr3_4:54218305-54218324 None:intergenic 55.0%
CGTCAAAGGCTCCAGTTGGT+CGG - chr3_4:54218306-54218325 None:intergenic 55.0%
CGACCAACTGGAGCCTTTGA+CGG + chr3_4:54218304-54218323 Msa0507110:CDS 55.0%
GACCATTGCCTTTGGCCGTA+GGG + chr3_4:54218326-54218345 Msa0507110:CDS 55.0%
CTCACTACCTCTGGTCCCTA+CGG - chr3_4:54218344-54218363 None:intergenic 55.0%
TAGGGACCAGAGGTAGTGAG+AGG + chr3_4:54218344-54218363 Msa0507110:CDS 55.0%
CAGAGGTAGTGAGAGGCCTA+GGG + chr3_4:54218351-54218370 Msa0507110:CDS 55.0%
AGAGGTAGTGAGAGGCCTAG+GGG + chr3_4:54218352-54218371 Msa0507110:CDS 55.0%
! ATCTTTGGAGGCCTACCCCT+AGG - chr3_4:54218370-54218389 None:intergenic 55.0%
! CCCCTTCTAGGTGGAGCATT+TGG - chr3_4:54218115-54218134 None:intergenic 55.0%
AGGCTTGGGTGGTGAGTACA+TGG - chr3_4:54218182-54218201 None:intergenic 55.0%
GTACTCACCACCCAAGCCTA+AGG + chr3_4:54218183-54218202 Msa0507110:CDS 55.0%
GGGCCATTTGGATCCTTTGG+AGG - chr3_4:54218214-54218233 None:intergenic 55.0%
GGTGGGCCATTTGGATCCTT+TGG - chr3_4:54218217-54218236 None:intergenic 55.0%
AGGATCCAAATGGCCCACCA+AGG + chr3_4:54218218-54218237 Msa0507110:CDS 55.0%
GCCTTCATTTGTGGAGGCCT+TGG - chr3_4:54218238-54218257 None:intergenic 55.0%
!! ATGAAGGCATCTGGTGGGAC+CGG + chr3_4:54218250-54218269 Msa0507110:CDS 55.0%
GTTGGTCGGGACATCTTCCT+GGG - chr3_4:54218292-54218311 None:intergenic 55.0%
AGTTGGTCGGGACATCTTCC+TGG - chr3_4:54218293-54218312 None:intergenic 55.0%
AGGAAGATGTCCCGACCAAC+TGG + chr3_4:54218292-54218311 Msa0507110:CDS 55.0%
GTCAAAGGCTCCAGTTGGTC+GGG - chr3_4:54218305-54218324 None:intergenic 55.0%
CGTCAAAGGCTCCAGTTGGT+CGG - chr3_4:54218306-54218325 None:intergenic 55.0%
CGACCAACTGGAGCCTTTGA+CGG + chr3_4:54218304-54218323 Msa0507110:CDS 55.0%
GACCATTGCCTTTGGCCGTA+GGG + chr3_4:54218326-54218345 Msa0507110:CDS 55.0%
CTCACTACCTCTGGTCCCTA+CGG - chr3_4:54218344-54218363 None:intergenic 55.0%
TAGGGACCAGAGGTAGTGAG+AGG + chr3_4:54218344-54218363 Msa0507110:CDS 55.0%
CAGAGGTAGTGAGAGGCCTA+GGG + chr3_4:54218351-54218370 Msa0507110:CDS 55.0%
AGAGGTAGTGAGAGGCCTAG+GGG + chr3_4:54218352-54218371 Msa0507110:CDS 55.0%
! ATCTTTGGAGGCCTACCCCT+AGG - chr3_4:54218370-54218389 None:intergenic 55.0%
! TGGAGCATTTGGGTCACGCC+TGG - chr3_4:54218104-54218123 None:intergenic 60.0%
CTTCCACGACCCCTTCTAGG+TGG - chr3_4:54218124-54218143 None:intergenic 60.0%
GGTCTTCCACGACCCCTTCT+AGG - chr3_4:54218127-54218146 None:intergenic 60.0%
GGTGGTGAGTACATGGCTCC+TGG - chr3_4:54218175-54218194 None:intergenic 60.0%
! TCCTTTGGAGGACGGCCCTT+AGG - chr3_4:54218202-54218221 None:intergenic 60.0%
GGACCGGAAGACCTAGAGGT+CGG + chr3_4:54218266-54218285 Msa0507110:CDS 60.0%
ATCTTCCTGGGCCGACCTCT+AGG - chr3_4:54218280-54218299 None:intergenic 60.0%
GGTCCGTCAAAGGCTCCAGT+TGG - chr3_4:54218310-54218329 None:intergenic 60.0%
GGACCATTGCCTTTGGCCGT+AGG + chr3_4:54218325-54218344 Msa0507110:CDS 60.0%
GTCCCTACGGCCAAAGGCAA+TGG - chr3_4:54218331-54218350 None:intergenic 60.0%
CCTAGGCCTCTCACTACCTC+TGG - chr3_4:54218353-54218372 None:intergenic 60.0%
CCAGAGGTAGTGAGAGGCCT+AGG + chr3_4:54218350-54218369 Msa0507110:CDS 60.0%
GTAGTGAGAGGCCTAGGGGT+AGG + chr3_4:54218356-54218375 Msa0507110:CDS 60.0%
! TGGAGCATTTGGGTCACGCC+TGG - chr3_4:54218104-54218123 None:intergenic 60.0%
CTTCCACGACCCCTTCTAGG+TGG - chr3_4:54218124-54218143 None:intergenic 60.0%
GGTCTTCCACGACCCCTTCT+AGG - chr3_4:54218127-54218146 None:intergenic 60.0%
GGTGGTGAGTACATGGCTCC+TGG - chr3_4:54218175-54218194 None:intergenic 60.0%
! TCCTTTGGAGGACGGCCCTT+AGG - chr3_4:54218202-54218221 None:intergenic 60.0%
GGACCGGAAGACCTAGAGGT+CGG + chr3_4:54218266-54218285 Msa0507110:CDS 60.0%
ATCTTCCTGGGCCGACCTCT+AGG - chr3_4:54218280-54218299 None:intergenic 60.0%
GGTCCGTCAAAGGCTCCAGT+TGG - chr3_4:54218310-54218329 None:intergenic 60.0%
GGACCATTGCCTTTGGCCGT+AGG + chr3_4:54218325-54218344 Msa0507110:CDS 60.0%
GTCCCTACGGCCAAAGGCAA+TGG - chr3_4:54218331-54218350 None:intergenic 60.0%
CCTAGGCCTCTCACTACCTC+TGG - chr3_4:54218353-54218372 None:intergenic 60.0%
CCAGAGGTAGTGAGAGGCCT+AGG + chr3_4:54218350-54218369 Msa0507110:CDS 60.0%
GTAGTGAGAGGCCTAGGGGT+AGG + chr3_4:54218356-54218375 Msa0507110:CDS 60.0%
GCTCCACCTAGAAGGGGTCG+TGG + chr3_4:54218118-54218137 Msa0507110:CDS 65.0%
GGGTCGTGGAAGACCACCCA+AGG + chr3_4:54218132-54218151 Msa0507110:CDS 65.0%
GGAGGACGGCCCTTAGGCTT+GGG - chr3_4:54218196-54218215 None:intergenic 65.0%
TGGAGGACGGCCCTTAGGCT+TGG - chr3_4:54218197-54218216 None:intergenic 65.0%
GCCTAAGGGCCGTCCTCCAA+AGG + chr3_4:54218198-54218217 Msa0507110:CDS 65.0%
! GGAGGCCTTGGTGGGCCATT+TGG - chr3_4:54218226-54218245 None:intergenic 65.0%
GGTGGGACCGGAAGACCTAG+AGG + chr3_4:54218262-54218281 Msa0507110:CDS 65.0%
GGGCCGACCTCTAGGTCTTC+CGG - chr3_4:54218272-54218291 None:intergenic 65.0%
GAAGACCTAGAGGTCGGCCC+AGG + chr3_4:54218272-54218291 Msa0507110:CDS 65.0%
CCTCTGGTCCCTACGGCCAA+AGG - chr3_4:54218337-54218356 None:intergenic 65.0%
CCTTTGGCCGTAGGGACCAG+AGG + chr3_4:54218334-54218353 Msa0507110:CDS 65.0%
GCTCCACCTAGAAGGGGTCG+TGG + chr3_4:54218118-54218137 Msa0507110:CDS 65.0%
GGGTCGTGGAAGACCACCCA+AGG + chr3_4:54218132-54218151 Msa0507110:CDS 65.0%
GGAGGACGGCCCTTAGGCTT+GGG - chr3_4:54218196-54218215 None:intergenic 65.0%
TGGAGGACGGCCCTTAGGCT+TGG - chr3_4:54218197-54218216 None:intergenic 65.0%
GCCTAAGGGCCGTCCTCCAA+AGG + chr3_4:54218198-54218217 Msa0507110:CDS 65.0%
! GGAGGCCTTGGTGGGCCATT+TGG - chr3_4:54218226-54218245 None:intergenic 65.0%
GGTGGGACCGGAAGACCTAG+AGG + chr3_4:54218262-54218281 Msa0507110:CDS 65.0%
GGGCCGACCTCTAGGTCTTC+CGG - chr3_4:54218272-54218291 None:intergenic 65.0%
GAAGACCTAGAGGTCGGCCC+AGG + chr3_4:54218272-54218291 Msa0507110:CDS 65.0%
CCTCTGGTCCCTACGGCCAA+AGG - chr3_4:54218337-54218356 None:intergenic 65.0%
CCTTTGGCCGTAGGGACCAG+AGG + chr3_4:54218334-54218353 Msa0507110:CDS 65.0%
GGACGGCCCTTAGGCTTGGG+TGG - chr3_4:54218193-54218212 None:intergenic 70.0%
GGACGGCCCTTAGGCTTGGG+TGG - chr3_4:54218193-54218212 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 54216771 54218634 54216771 ID=Msa0507110;Name=Msa0507110
chr3_4 mRNA 54216771 54218634 54216771 ID=Msa0507110-mRNA-1;Parent=Msa0507110;Name=Msa0507110-mRNA-1;_AED=0.02;_eAED=0.02;_QI=62|1|1|1|0|0.5|2|211|184
chr3_4 exon 54216771 54216886 54216771 ID=Msa0507110-mRNA-1:exon:12012;Parent=Msa0507110-mRNA-1
chr3_4 exon 54217923 54218634 54217923 ID=Msa0507110-mRNA-1:exon:12013;Parent=Msa0507110-mRNA-1
chr3_4 five_prime_UTR 54216771 54216832 54216771 ID=Msa0507110-mRNA-1:five_prime_utr;Parent=Msa0507110-mRNA-1
chr3_4 CDS 54216833 54216886 54216833 ID=Msa0507110-mRNA-1:cds;Parent=Msa0507110-mRNA-1
chr3_4 CDS 54217923 54218423 54217923 ID=Msa0507110-mRNA-1:cds;Parent=Msa0507110-mRNA-1
chr3_4 three_prime_UTR 54218424 54218634 54218424 ID=Msa0507110-mRNA-1:three_prime_utr;Parent=Msa0507110-mRNA-1
Gene Sequence

>Msa0507110

ATGGCTACTGGAGTGGTTATTAATAAACCTCTTTCACTTCCATCTTACCGTGAGATGATTTTGAAGGCAATAGAAGGATTAAATGAAGAAAATGGTTCAAACAAATCCTCAATATCCAAGTACATAGAATCCACATACGGTGGATTACCTCAAGGACACAAGGCACTACTCAACTTGCACCTTGCAAGAATGAGGGACAGTGGTGAATTAGTATTTTGGAAAAACAACTACACCAGGCGTGACCCAAATGCTCCACCTAGAAGGGGTCGTGGAAGACCACCCAAGGCTAAAGAGTCTTTTTCGCCAGGAGCCATGTACTCACCACCCAAGCCTAAGGGCCGTCCTCCAAAGGATCCAAATGGCCCACCAAGGCCTCCACAAATGAAGGCATCTGGTGGGACCGGAAGACCTAGAGGTCGGCCCAGGAAGATGTCCCGACCAACTGGAGCCTTTGACGGACCATTGCCTTTGGCCGTAGGGACCAGAGGTAGTGAGAGGCCTAGGGGTAGGCCTCCAAAGATGAAATCCACAACATTGGCTGAAATTAACGCTTAA
Protein sequence

>Msa0507110

MATGVVINKPLSLPSYREMILKAIEGLNEENGSNKSSISKYIESTYGGLPQGHKALLNLHLARMRDSGELVFWKNNYTRRDPNAPPRRGRGRPPKAKESFSPGAMYSPPKPKGRPPKDPNGPPRPPQMKASGGTGRPRGRPRKMSRPTGAFDGPLPLAVGTRGSERPRGRPPKMKSTTLAEINA*