AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1090140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1090140 MtrunA17_Chr8g0384161 96.860 605 14 1 1 605 1 600 0.0 1203
Msa1090140 MtrunA17_Chr2g0321211 28.426 394 220 10 11 374 11 372 6.26e-39 153
Msa1090140 MtrunA17_Chr4g0026671 27.723 404 214 12 11 374 11 376 5.89e-36 144
Msa1090140 MtrunA17_Chr1g0185501 38.028 142 80 2 52 191 13 148 6.62e-17 82.0
Msa1090140 MtrunA17_Chr1g0185501 27.273 209 101 5 16 182 114 313 6.22e-12 67.0
Msa1090140 MtrunA17_Chr6g0448921 27.848 158 97 3 25 181 29 170 5.36e-14 75.5
Msa1090140 MtrunA17_Chr6g0448921 25.610 164 107 2 18 181 64 212 1.53e-11 67.4
Msa1090140 MtrunA17_Chr7g0253861 29.496 139 92 2 44 181 35 168 2.85e-13 71.6
Msa1090140 MtrunA17_Chr4g0067151 28.019 207 130 5 55 244 18 222 5.11e-13 70.5
Msa1090140 MtrunA17_Chr5g0405851 29.762 168 102 4 21 187 261 413 9.66e-13 70.9
Msa1090140 MtrunA17_Chr1g0172501 27.381 168 106 3 21 187 364 516 2.58e-12 69.7
Msa1090140 MtrunA17_Chr3g0093681 27.381 168 106 3 21 187 364 516 2.94e-12 69.3
Msa1090140 MtrunA17_Chr2g0281451 25.000 232 138 7 28 243 31 242 1.09e-11 68.2
Msa1090140 MtrunA17_Chr3g0136971 26.036 169 110 3 13 181 419 572 1.16e-11 67.8
Msa1090140 MtrunA17_Chr4g0053651 31.655 139 80 2 58 187 407 539 1.69e-11 67.0
Msa1090140 MtrunA17_Chr8g0352821 28.571 168 103 5 16 181 312 464 3.46e-11 66.2
Msa1090140 MtrunA17_Chr3g0095501 28.444 225 137 8 34 244 242 456 4.13e-11 65.9
Msa1090140 MtrunA17_Chr1g0176241 30.894 123 79 1 60 182 366 482 4.58e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1090140 AT5G64630.2 69.634 382 114 2 1 380 1 382 0.0 582
Msa1090140 AT5G64630.1 70.479 376 109 2 1 374 1 376 0.0 576
Msa1090140 AT5G64630.3 70.915 306 87 2 77 380 18 323 4.04e-164 475
Msa1090140 AT3G44530.2 27.665 394 221 11 11 374 11 370 1.86e-35 143
Msa1090140 AT3G44530.1 27.665 394 221 11 11 374 11 370 2.71e-35 142
Msa1090140 AT1G11160.3 29.412 170 103 4 13 181 16 169 1.32e-14 77.8
Msa1090140 AT1G11160.2 29.412 170 103 4 13 181 58 211 1.45e-14 77.8
Msa1090140 AT1G11160.1 29.412 170 103 4 13 181 58 211 1.48e-14 77.8
Msa1090140 AT1G11160.4 29.412 170 103 4 13 181 58 211 1.52e-14 77.8
Msa1090140 AT2G43770.1 30.935 139 90 2 44 181 33 166 6.63e-14 73.9
Msa1090140 AT3G49660.1 30.244 205 124 6 56 244 14 215 8.65e-14 73.2
Msa1090140 AT3G49660.1 28.977 176 108 3 12 184 154 315 3.48e-11 65.1
Msa1090140 AT1G61210.1 29.677 155 93 3 28 181 72 211 1.03e-13 75.1
Msa1090140 AT1G61210.3 29.677 155 93 3 28 181 72 211 1.05e-13 75.1
Msa1090140 AT1G61210.2 29.677 155 93 3 28 181 72 211 1.06e-13 75.1
Msa1090140 AT5G67320.1 23.184 358 199 12 16 360 268 562 1.88e-12 70.5
Msa1090140 AT5G08390.1 27.215 158 98 3 25 181 29 170 2.07e-12 70.9
Msa1090140 AT5G08390.1 27.273 154 97 2 28 181 74 212 5.52e-11 66.2
Msa1090140 AT5G23430.1 25.949 158 100 3 25 181 29 170 2.52e-12 70.5
Msa1090140 AT5G23430.1 27.273 154 97 2 28 181 74 212 4.85e-11 66.2
Msa1090140 AT5G23430.1 23.377 154 103 2 16 169 104 242 5.96e-11 66.2
Msa1090140 AT5G23430.3 25.949 158 100 3 25 181 29 170 2.54e-12 70.5
Msa1090140 AT5G23430.3 27.273 154 97 2 28 181 74 212 5.06e-11 66.2
Msa1090140 AT5G23430.3 23.377 154 103 2 16 169 104 242 6.06e-11 66.2
Msa1090140 AT5G23430.2 25.949 158 100 3 25 181 29 170 2.54e-12 70.5
Msa1090140 AT5G23430.2 27.273 154 97 2 28 181 74 212 5.06e-11 66.2
Msa1090140 AT5G23430.2 23.377 154 103 2 16 169 104 242 6.06e-11 66.2
Msa1090140 AT3G21540.1 27.108 166 106 3 25 190 76 226 2.02e-11 67.8
Msa1090140 AT5G52820.1 29.221 154 95 2 28 181 332 471 3.06e-11 66.6
Msa1090140 AT5G13480.3 27.811 169 105 5 16 182 240 393 4.24e-11 66.2
Msa1090140 AT5G13480.2 27.976 168 104 5 16 181 263 415 5.33e-11 66.2
Msa1090140 AT5G13480.4 27.811 169 105 5 16 182 240 393 5.53e-11 65.9
Msa1090140 AT1G73720.1 29.878 164 108 2 21 184 221 377 5.99e-11 65.5
Msa1090140 AT5G13480.1 27.811 169 105 5 16 182 252 405 6.27e-11 65.9
Msa1090140 AT5G25150.1 27.647 170 108 3 12 181 417 571 6.92e-11 65.9
Msa1090140 AT4G02730.1 28.025 157 99 2 28 184 58 200 7.68e-11 64.3
Msa1090140 AT4G02730.1 30.464 151 95 4 41 187 17 161 8.04e-11 64.3
Msa1090140 AT2G41500.1 27.778 162 101 4 21 181 347 493 8.32e-11 65.5
Msa1090140 AT2G41500.2 27.778 162 101 4 21 181 347 493 8.32e-11 65.5
Msa1090140 AT5G25150.2 27.647 170 108 3 12 181 417 571 8.94e-11 65.5

Find 174 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCAACACCCTTTGATTTA+TGG 0.105744 7_3:+3860146 None:intergenic
TTGATAATTCTTGCATTATA+TGG 0.142799 7_3:-3860414 Msa1090140:CDS
CTAATTGGATTCGAGAATTT+AGG 0.165281 7_3:+3861815 None:intergenic
CCTCTTGTTGCTCCCTGTTT+TGG 0.194498 7_3:-3856722 Msa1090140:three_prime_UTR
AAGCTTAAGGGAACAAATTC+AGG 0.235111 7_3:-3858903 Msa1090140:intron
CTCAACACCCTTTGATTTAT+GGG 0.254796 7_3:+3860147 None:intergenic
GCAAGATGGTTTCTGCTCTT+TGG 0.262968 7_3:-3857628 Msa1090140:CDS
TGTGCTGTCTTGCCAATATA+AGG 0.270585 7_3:+3856561 None:intergenic
ACCTTGGAATTCTTTAATAA+TGG 0.273035 7_3:+3860079 None:intergenic
TGTACACGGGCGGACGTTAA+TGG 0.274606 7_3:+3856781 None:intergenic
GTGGAACGGTTCAGATTAAT+TGG 0.283065 7_3:-3861771 Msa1090140:CDS
GGGTAGCCTGGGACCCTTTA+GGG 0.287919 7_3:-3860225 Msa1090140:CDS
CCTGTATTATTTAAGCTTAA+GGG 0.292681 7_3:-3858915 Msa1090140:CDS
ATCTCATGTCAAGGACATTA+TGG 0.295539 7_3:-3860482 Msa1090140:CDS
GGTTTAGGCAGTATTAATTC+TGG 0.297106 7_3:-3857036 Msa1090140:CDS
AAACTGTCATTGCCTTATAT+TGG 0.298149 7_3:-3856573 Msa1090140:three_prime_UTR
TTGCAAGCATGTTATTTCTA+AGG 0.302678 7_3:-3860110 Msa1090140:CDS
TCCTGTATTATTTAAGCTTA+AGG 0.303126 7_3:-3858916 Msa1090140:CDS
TTATGGTCAGTTAAACCTTC+TGG 0.304531 7_3:-3861564 Msa1090140:CDS
ATAGAAGCATCTGCGGATAT+TGG 0.310571 7_3:-3857345 Msa1090140:CDS
CAGAATATGTAAACCAAAAC+AGG 0.313462 7_3:+3856709 None:intergenic
AAGAAGTTACGGCAGATATT+AGG 0.314518 7_3:-3857179 Msa1090140:CDS
GGAAAGAAAGAAAGGGAATT+TGG 0.319336 7_3:+3861885 None:intergenic
GTTATTCGCTTCTCTTCTTC+CGG 0.322943 7_3:-3861474 Msa1090140:intron
TAGGAGGTGAATTGTTAATA+TGG 0.323433 7_3:-3861214 Msa1090140:CDS
TAGAAGCATCTGCGGATATT+GGG 0.324017 7_3:-3857344 Msa1090140:CDS
TGTAGCAGAAAGCATGAAAA+TGG 0.326121 7_3:-3857397 Msa1090140:CDS
TCAGGGGAATTGTTAGCTTC+TGG 0.327465 7_3:-3861359 Msa1090140:intron
TACCAGGTAATATCTGTTAC+TGG 0.342872 7_3:+3857776 None:intergenic
GGGGTAGCCTGGGACCCTTT+AGG 0.345674 7_3:-3860226 Msa1090140:CDS
ACGGCAAATACAATGCGATA+TGG 0.353051 7_3:+3857878 None:intergenic
GCGAGGAGAATGCTAAATAA+TGG 0.354160 7_3:+3857649 None:intergenic
TCTTAAGAACCTTCCATGTT+TGG 0.355215 7_3:+3861168 None:intergenic
TTTCTAGAAAAGATCTTTCT+CGG 0.365269 7_3:-3859157 Msa1090140:intron
TGATAATTCTTGCATTATAT+GGG 0.369746 7_3:-3860413 Msa1090140:CDS
TAATTGGATTCGAGAATTTA+GGG 0.372592 7_3:+3861816 None:intergenic
GACGTGATCATCAAATCAAC+TGG 0.376440 7_3:-3857273 Msa1090140:CDS
GCTTCACTTTGTTTACCATC+TGG 0.376477 7_3:+3856979 None:intergenic
GAAAGGGAATTTGGCGCTCT+TGG 0.376847 7_3:+3861894 None:intergenic
ATTTCAGGTTCTTACAAAAT+CGG 0.390240 7_3:-3859215 Msa1090140:intron
ACAACTAGGACTGCAAATAT+TGG 0.390908 7_3:-3857114 Msa1090140:CDS
GCAATGACAGTTTGCTAACT+AGG 0.397079 7_3:+3856583 None:intergenic
AGCTATGATACGAGAGACTA+TGG 0.397147 7_3:+3861508 None:intergenic
AATAAACCGCTTAGTGGTTT+AGG 0.401829 7_3:-3857051 Msa1090140:CDS
GATGGGCGTGCTCTTTGAAC+TGG 0.406251 7_3:+3856876 None:intergenic
CCTGGCTGGCTTATTTGTGA+TGG 0.408283 7_3:+3856858 None:intergenic
GGGGCTTACTGATGTAAATT+CGG 0.412302 7_3:+3860167 None:intergenic
AATAGGTGTAATGCGCTTCC+TGG 0.413685 7_3:+3856840 None:intergenic
TGTTTACCATCTGGATTAGC+TGG 0.414235 7_3:+3856988 None:intergenic
AATCATGGATCAATTGCAAT+AGG 0.415154 7_3:+3856823 None:intergenic
CCCTTAAGCTTAAATAATAC+AGG 0.415889 7_3:+3858915 None:intergenic
GTCGAAATCGGCGCCGGCGG+TGG 0.417147 7_3:+3861693 None:intergenic
GAGTACCTTGATGTCGAAAT+CGG 0.419824 7_3:+3861681 None:intergenic
ACAGAAAATAAACCGCTTAG+TGG 0.420179 7_3:-3857057 Msa1090140:CDS
AATGATGCTGTACTGCCAAC+TGG 0.420457 7_3:-3857435 Msa1090140:CDS
GGACGTTAATGGAGCTTCTC+TGG 0.427242 7_3:+3856792 None:intergenic
TCTCCAATAGCAATATTTGC+TGG 0.427714 7_3:-3857812 Msa1090140:CDS
TACCCATGCACACTATGTTC+AGG 0.428891 7_3:-3860248 Msa1090140:CDS
AGAACATAAAGCTGATGATA+TGG 0.434203 7_3:-3857208 Msa1090140:CDS
CGGCAAATACAATGCGATAT+GGG 0.436720 7_3:+3857879 None:intergenic
GTGCAATTATAGCTGACAAT+AGG 0.437372 7_3:-3857242 Msa1090140:CDS
CGAGGAGAATGCTAAATAAT+GGG 0.437934 7_3:+3857650 None:intergenic
AGTTGGCAGTACAGCATCAT+TGG 0.441293 7_3:+3857437 None:intergenic
AAGCAATATACTTCCCTAAA+GGG 0.441686 7_3:+3860212 None:intergenic
AGGAGAGAGGATGAAAATCT+AGG 0.444191 7_3:+3861725 None:intergenic
CTGGCTGGCTTATTTGTGAT+GGG 0.451089 7_3:+3856859 None:intergenic
CAAAACTGTAATACAAGATA+AGG 0.454159 7_3:-3857301 Msa1090140:CDS
ATGAAAATCTAGGGTCAAAA+CGG 0.456456 7_3:+3861735 None:intergenic
TCATTTCTACTTGTGCCTGC+AGG 0.457534 7_3:-3859895 Msa1090140:intron
TGATGTAAATTCGGCAAGTC+CGG 0.458166 7_3:+3860176 None:intergenic
GAAGCAATATACTTCCCTAA+AGG 0.462365 7_3:+3860211 None:intergenic
AGATGGTTTCTGCTCTTTGG+TGG 0.462913 7_3:-3857625 Msa1090140:CDS
GAGGTAAGGGAAAGAAAGAA+AGG 0.467887 7_3:+3861877 None:intergenic
AGGCCAGCAAATATTGCTAT+TGG 0.470462 7_3:+3857809 None:intergenic
GAAAATGGAAGTGGAAGAAA+AGG 0.470474 7_3:-3857382 Msa1090140:CDS
CTTTCTTTAGAAGATTAGCT+TGG 0.475618 7_3:-3859930 Msa1090140:CDS
GATGGTGGATATATCATATC+CGG 0.477811 7_3:-3860442 Msa1090140:CDS
AGCTAATCTTCTAAAGAAAG+AGG 0.478727 7_3:+3859933 None:intergenic
AGTTTGCTAACTAGGAAAGT+TGG 0.479811 7_3:+3856591 None:intergenic
AATGCTAAATAATGGGCATC+AGG 0.480540 7_3:+3857657 None:intergenic
GGAAGGTTCTTAAGATGTTA+CGG 0.484149 7_3:-3861160 Msa1090140:intron
TTGTTAGCTTCTGGTTCTGA+TGG 0.487437 7_3:-3861350 Msa1090140:intron
GAAATCTAGAAACTGAGGTA+AGG 0.488899 7_3:+3861863 None:intergenic
GCAAGAATTATCAACTGATC+CGG 0.489164 7_3:+3860423 None:intergenic
GGCGCCGGCGGTGGCGAGAG+TGG 0.492172 7_3:+3861702 None:intergenic
GGTGTAATGCGCTTCCTGGC+TGG 0.492898 7_3:+3856844 None:intergenic
TCTGAGGCAGCACAAAAGAC+AGG 0.494736 7_3:-3856910 Msa1090140:CDS
CTATGGACATAAGTAACTAC+TGG 0.497360 7_3:+3861525 None:intergenic
TTGCTTCTCTTAGTTCTGAC+CGG 0.499917 7_3:-3860195 Msa1090140:CDS
TCCTCCACTCTCGCCACCGC+CGG 0.506417 7_3:-3861706 Msa1090140:CDS
TTGTTTCGACGCCTTCTCTT+CGG 0.508062 7_3:+3857011 None:intergenic
ATCAAATCAACTGGGAATGT+TGG 0.509725 7_3:-3857264 Msa1090140:CDS
TGAAAATCTAGGGTCAAAAC+GGG 0.513397 7_3:+3861736 None:intergenic
TATGGTCATTGAAGAAGTTA+CGG 0.513659 7_3:-3857190 Msa1090140:CDS
CCAAAACAGGGAGCAACAAG+AGG 0.515573 7_3:+3856722 None:intergenic
TGTTCTAGAAGAAAATGTCT+TGG 0.518483 7_3:-3857487 Msa1090140:intron
TCTAGAAGAAAATGTCTTGG+AGG 0.520903 7_3:-3857484 Msa1090140:intron
ACTAAAACAAGAGGTCCAAA+AGG 0.520945 7_3:+3856623 None:intergenic
TCAACACCCTTTGATTTATG+GGG 0.521191 7_3:+3860148 None:intergenic
GAGTTCGAAAATGACGAACT+TGG 0.523533 7_3:-3857603 Msa1090140:CDS
CTCCAGTAACAGATATTACC+TGG 0.525209 7_3:-3857778 Msa1090140:intron
ACCCATGCACACTATGTTCA+GGG 0.526102 7_3:-3860247 Msa1090140:CDS
AAACAGGGAGCAACAAGAGG+GGG 0.527404 7_3:+3856725 None:intergenic
CAAAACAGGGAGCAACAAGA+GGG 0.528650 7_3:+3856723 None:intergenic
CAGTAAGCCCCATAAATCAA+AGG 0.530540 7_3:-3860155 Msa1090140:CDS
ACAAAGTGAAGCAGAAGAGA+AGG 0.531573 7_3:-3856968 Msa1090140:CDS
GTACTGCCAACTGGGAGTGT+TGG 0.531914 7_3:-3857426 Msa1090140:CDS
CAGCATCATTGGCTGTCTGA+AGG 0.533000 7_3:+3857448 None:intergenic
GCACACGGAAGCTGTATAGC+AGG 0.533198 7_3:+3858969 None:intergenic
AAGCTACATTCAACGGATAC+CGG 0.534046 7_3:-3861191 Msa1090140:CDS
ACAAGTAGAAATGAACCATC+TGG 0.534204 7_3:+3859904 None:intergenic
GGAGAGAGGATGAAAATCTA+GGG 0.535173 7_3:+3861726 None:intergenic
GCCATTATTAAAGAATTCCA+AGG 0.535247 7_3:-3860080 Msa1090140:intron
ATACTTCCCTAAAGGGTCCC+AGG 0.540607 7_3:+3860219 None:intergenic
CATGGGTATCCAACGTCTGA+AGG 0.542223 7_3:+3860263 None:intergenic
CTGAATTAGATCTCATGTCA+AGG 0.544197 7_3:-3860491 Msa1090140:intron
TGCTTACTTGATAAGCAGTA+AGG 0.544917 7_3:+3857576 None:intergenic
CCATCACAAATAAGCCAGCC+AGG 0.546404 7_3:-3856858 Msa1090140:CDS
CACCATCAGTAGACCACTCC+AGG 0.547065 7_3:+3860458 None:intergenic
AAATCTAGAAACTGAGGTAA+GGG 0.549698 7_3:+3861864 None:intergenic
AAGAACCTTCCATGTTTGGC+CGG 0.550032 7_3:+3861172 None:intergenic
AAGAGGGCAATGTTTCATCA+TGG 0.552525 7_3:+3859950 None:intergenic
AGTAAGCCCCATAAATCAAA+GGG 0.552990 7_3:-3860154 Msa1090140:CDS
AGGTAAGGGAAAGAAAGAAA+GGG 0.554936 7_3:+3861878 None:intergenic
AGAAGCATCTGCGGATATTG+GGG 0.556121 7_3:-3857343 Msa1090140:CDS
CAATGAATTCAATGTGGCCA+CGG 0.558304 7_3:+3857859 None:intergenic
AGCATCATTGGCTGTCTGAA+GGG 0.562358 7_3:+3857449 None:intergenic
CTTGATGTCGAAATCGGCGC+CGG 0.562663 7_3:+3861687 None:intergenic
AGAAAGCATGAAAATGGAAG+TGG 0.567606 7_3:-3857391 Msa1090140:CDS
GATCGAAGATCGAAAATGAA+AGG 0.568510 7_3:-3861793 Msa1090140:exon
CAACGGATACCGGCCAAACA+TGG 0.571072 7_3:-3861181 Msa1090140:CDS
ACATGATCATTGAGACAACT+AGG 0.572546 7_3:-3857128 Msa1090140:CDS
TTAGCATTCTCCTCGCAAGA+TGG 0.577028 7_3:-3857642 Msa1090140:CDS
GATGTCGAAATCGGCGCCGG+CGG 0.578100 7_3:+3861690 None:intergenic
GCTAATCTTCTAAAGAAAGA+GGG 0.578416 7_3:+3859934 None:intergenic
GTGGCGAGAGTGGAGGAGAG+AGG 0.578840 7_3:+3861712 None:intergenic
TAATTCTGGAGCCGAAGAGA+AGG 0.580982 7_3:-3857022 Msa1090140:CDS
AATATGGAAGCTACATTCAA+CGG 0.583979 7_3:-3861198 Msa1090140:CDS
ATATCGCATTGTATTTGCCG+TGG 0.587379 7_3:-3857876 Msa1090140:CDS
GACCTGGAGTGGTCTACTGA+TGG 0.591206 7_3:-3860460 Msa1090140:CDS
CGAAGATCGAAAATGAAAGG+TGG 0.592725 7_3:-3861790 Msa1090140:exon
AAAACAGGGAGCAACAAGAG+GGG 0.596797 7_3:+3856724 None:intergenic
CGGCGCCGATTTCGACATCA+AGG 0.597052 7_3:-3861686 Msa1090140:intron
GGAAGAAAAGGTTGATGACA+TGG 0.598747 7_3:-3857370 Msa1090140:CDS
ATGATGCTGTACTGCCAACT+GGG 0.600017 7_3:-3857434 Msa1090140:CDS
TGTCAAGGACATTATGGACC+TGG 0.600660 7_3:-3860476 Msa1090140:CDS
ATCGAAAATGAAAGGTGGAA+CGG 0.602727 7_3:-3861785 Msa1090140:exon
GCCGGCGGTGGCGAGAGTGG+AGG 0.602972 7_3:+3861705 None:intergenic
ATGCTGTCCGAAGTTGATTG+TGG 0.605226 7_3:+3856937 None:intergenic
CTGGAGTGGTCTACTGATGG+TGG 0.606311 7_3:-3860457 Msa1090140:CDS
AGATTAGCTTGGTCTCCAGA+TGG 0.606836 7_3:-3859919 Msa1090140:CDS
CCCCTGAACATAGTGTGCAT+GGG 0.610840 7_3:+3860246 None:intergenic
ACAACAGCTTTGCTTGCACA+CGG 0.611738 7_3:+3858954 None:intergenic
AGGAACTAACCTTCAGACGT+TGG 0.618886 7_3:-3860272 Msa1090140:CDS
AGATAAACCACAATCAACTT+CGG 0.619414 7_3:-3856944 Msa1090140:CDS
CTGAGGCAGCACAAAAGACA+GGG 0.619610 7_3:-3856909 Msa1090140:CDS
AAACAACCAGCTAATCCAGA+TGG 0.634861 7_3:-3856994 Msa1090140:CDS
AACAGGGAGCAACAAGAGGG+GGG 0.637316 7_3:+3856726 None:intergenic
ATGTAGAAATCTAGAAACTG+AGG 0.637464 7_3:+3861858 None:intergenic
ATTATATGGGATGTTAACAA+AGG 0.639783 7_3:-3860400 Msa1090140:intron
GGATACCGGCCAAACATGGA+AGG 0.640280 7_3:-3861177 Msa1090140:CDS
CTGTTACTGGAGCATAGTGA+AGG 0.641031 7_3:+3857789 None:intergenic
CCCATGCACACTATGTTCAG+GGG 0.644214 7_3:-3860246 Msa1090140:CDS
TTCGGACAGCATAAAATCTG+AGG 0.646284 7_3:-3856926 Msa1090140:CDS
AAACCTATGACTAAAACAAG+AGG 0.649877 7_3:+3856614 None:intergenic
AGGACATTATGGACCTGGAG+TGG 0.656666 7_3:-3860471 Msa1090140:CDS
ACTGCACCAACACTCCCAGT+TGG 0.657606 7_3:+3857420 None:intergenic
CATGGACATAGAAGCATCTG+CGG 0.658877 7_3:-3857352 Msa1090140:CDS
AGAGCAGAAACCATCTTGCG+AGG 0.660888 7_3:+3857632 None:intergenic
ACGTGATCATCAAATCAACT+GGG 0.672733 7_3:-3857272 Msa1090140:CDS
CCATGCACACTATGTTCAGG+GGG 0.683808 7_3:-3860245 Msa1090140:CDS
ATACTGCCTAAACCACTAAG+CGG 0.687500 7_3:+3857045 None:intergenic
AATGTACAATGAATTCAATG+TGG 0.699967 7_3:+3857853 None:intergenic
AGAATATGTAAACCAAAACA+GGG 0.715313 7_3:+3856710 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTATTTTAAATTAAAA+CGG + chr7_3:3857708-3857727 None:intergenic 0.0%
!!! TTTTTTTTTTTTTATGTTTC+AGG - chr7_3:3857023-3857042 Msa1090140:CDS 10.0%
!!! TTTTTTTTTTTTATGTTTCA+GGG - chr7_3:3857024-3857043 Msa1090140:CDS 10.0%
!!! TTATTTAGCTTTTTTTTTTT+AGG - chr7_3:3857304-3857323 Msa1090140:CDS 10.0%
!! TAACTAATTAATTGAATGAT+GGG + chr7_3:3856762-3856781 None:intergenic 15.0%
!! TTAACTAATTAATTGAATGA+TGG + chr7_3:3856763-3856782 None:intergenic 15.0%
!!! TTTTTTTTTTTATGTTTCAG+GGG - chr7_3:3857025-3857044 Msa1090140:CDS 15.0%
!!! CTATTTTTTTGTTTCTTTTT+AGG - chr7_3:3857167-3857186 Msa1090140:CDS 15.0%
!!! AACTAACAATACATAAATTT+TGG + chr7_3:3858983-3859002 None:intergenic 15.0%
!!! ATGATGGTTTTTATAATATT+GGG + chr7_3:3859629-3859648 None:intergenic 15.0%
!! TAGACAATTATTGAATAAAT+AGG - chr7_3:3859874-3859893 Msa1090140:intron 15.0%
!! AGACAATTATTGAATAAATA+GGG - chr7_3:3859875-3859894 Msa1090140:intron 15.0%
!!! GAATTATGATGTTTTTTTTT+TGG - chr7_3:3860682-3860701 Msa1090140:intron 15.0%
!! TTTCAATGAAATGAATTTAC+CGG + chr7_3:3856948-3856967 None:intergenic 20.0%
!! AAAAAAAAAAATCAACAGCA+GGG + chr7_3:3857088-3857107 None:intergenic 20.0%
!! AAAAAAAAAAAATCAACAGC+AGG + chr7_3:3857089-3857108 None:intergenic 20.0%
!!! TTTTTTTGTTTCTTTTTAGG+AGG - chr7_3:3857170-3857189 Msa1090140:CDS 20.0%
!! TATTTCTCTCTTTCATTAAA+TGG + chr7_3:3857409-3857428 None:intergenic 20.0%
!!! AAGAAAATTATTGATTTCCT+AGG - chr7_3:3857519-3857538 Msa1090140:intron 20.0%
!!! AATTTTGTTTGATTTCTTTC+CGG - chr7_3:3857731-3857750 Msa1090140:intron 20.0%
!! AGTAAAGGTTATTATTTCAT+AGG - chr7_3:3857769-3857788 Msa1090140:intron 20.0%
!!! TTGATAATTCTTGCATTATA+TGG - chr7_3:3857986-3858005 Msa1090140:intron 20.0%
!! TGATAATTCTTGCATTATAT+GGG - chr7_3:3857987-3858006 Msa1090140:intron 20.0%
!! GCAAAAAAAGTAAGATAAAT+TGG + chr7_3:3858560-3858579 None:intergenic 20.0%
!! AAATAGTATATATCATTCAG+TGG + chr7_3:3859092-3859111 None:intergenic 20.0%
!!! TATACTATTTTCTTCCTTTA+TGG - chr7_3:3859102-3859121 Msa1090140:intron 20.0%
!!! ATGATAAAAAGTATGCTTTT+GGG + chr7_3:3859298-3859317 None:intergenic 20.0%
!!! AATGATAAAAAGTATGCTTT+TGG + chr7_3:3859299-3859318 None:intergenic 20.0%
!!! TTTTTATAATATTGGGCAAA+AGG + chr7_3:3859622-3859641 None:intergenic 20.0%
!!! CATGATGGTTTTTATAATAT+TGG + chr7_3:3859630-3859649 None:intergenic 20.0%
!! CAATATTATAAAAACCATCA+TGG - chr7_3:3859628-3859647 Msa1090140:intron 20.0%
!! TCCGTTCAATTTATTAAAAT+AGG - chr7_3:3859684-3859703 Msa1090140:intron 20.0%
!!! GCCTATTTTAATAAATTGAA+CGG + chr7_3:3859688-3859707 None:intergenic 20.0%
!! TCCTACAATATCAATATTAT+TGG - chr7_3:3860148-3860167 Msa1090140:CDS 20.0%
!! ACCAATAATATTGATATTGT+AGG + chr7_3:3860152-3860171 None:intergenic 20.0%
!! TACAATATCAATATTATTGG+TGG - chr7_3:3860151-3860170 Msa1090140:CDS 20.0%
!!! ATGTAGTTTCTATTTCTTAT+TGG - chr7_3:3860179-3860198 Msa1090140:CDS 20.0%
!! TTGTTTATCTATTGATATAG+TGG - chr7_3:3860323-3860342 Msa1090140:intron 20.0%
!!! ACTTTAAAATAATGATTGGT+AGG + chr7_3:3860423-3860442 None:intergenic 20.0%
!!! CAGAACTTTAAAATAATGAT+TGG + chr7_3:3860427-3860446 None:intergenic 20.0%
!!! ATGATGTTTTTTTTTTGGAA+AGG - chr7_3:3860687-3860706 Msa1090140:intron 20.0%
! TAATTGGATTCGAGAATTTA+GGG + chr7_3:3856587-3856606 None:intergenic 25.0%
! AGAAATCTAATCAGAAACAT+TGG + chr7_3:3857149-3857168 None:intergenic 25.0%
! AGCTAAATAATGCAAATAAG+TGG + chr7_3:3857294-3857313 None:intergenic 25.0%
! CAAAATAAGAACTTGAAATG+TGG - chr7_3:3857567-3857586 Msa1090140:intron 25.0%
! AAAAGTAGATATGGAAGTAA+AGG - chr7_3:3857754-3857773 Msa1090140:intron 25.0%
!!! GTATGATTGATTTTTGTGAA+TGG + chr7_3:3857816-3857835 None:intergenic 25.0%
! ATTGATGCAGTAAAACATAA+AGG + chr7_3:3857865-3857884 None:intergenic 25.0%
! ATTATATGGGATGTTAACAA+AGG - chr7_3:3858000-3858019 Msa1090140:intron 25.0%
! ACCTTGGAATTCTTTAATAA+TGG + chr7_3:3858324-3858343 None:intergenic 25.0%
! TGTGTATTATTCATTGCAAA+TGG - chr7_3:3858639-3858658 Msa1090140:intron 25.0%
!! GATTTTCTGTTATAAAACAG+AGG + chr7_3:3858782-3858801 None:intergenic 25.0%
! TATGATAGGATACTGAATTT+GGG + chr7_3:3858853-3858872 None:intergenic 25.0%
! TTATGATAGGATACTGAATT+TGG + chr7_3:3858854-3858873 None:intergenic 25.0%
! AATCTCTATGCAATTATGAT+AGG + chr7_3:3858867-3858886 None:intergenic 25.0%
! TTCCTGTGAATGAAATATAA+TGG + chr7_3:3858927-3858946 None:intergenic 25.0%
! ATAGTTTAGATGCAACTTAT+AGG - chr7_3:3859061-3859080 Msa1090140:intron 25.0%
!! ATTTTGTAAGAACCTGAAAT+GGG + chr7_3:3859185-3859204 None:intergenic 25.0%
!!! ATTTCAGGTTCTTACAAAAT+CGG - chr7_3:3859185-3859204 Msa1090140:CDS 25.0%
!! TTTCTAGAAAAGATCTTTCT+CGG - chr7_3:3859243-3859262 Msa1090140:intron 25.0%
! ATTATTTAACCTTGATATGC+AGG - chr7_3:3859408-3859427 Msa1090140:intron 25.0%
! TCCTGTATTATTTAAGCTTA+AGG - chr7_3:3859484-3859503 Msa1090140:intron 25.0%
! CCTGTATTATTTAAGCTTAA+GGG - chr7_3:3859485-3859504 Msa1090140:intron 25.0%
! AACTAGTTATACATAGTTAC+TGG + chr7_3:3859538-3859557 None:intergenic 25.0%
! TCACAATCTTTACTAATAAG+AGG + chr7_3:3859759-3859778 None:intergenic 25.0%
! TTATTAGTAAAGATTGTGAG+AGG - chr7_3:3859760-3859779 Msa1090140:intron 25.0%
! TTAGACAGGTTTATGTTATT+AGG - chr7_3:3859818-3859837 Msa1090140:intron 25.0%
! TAGGGAAATTGAATATTGAT+TGG - chr7_3:3859893-3859912 Msa1090140:intron 25.0%
!!! AATGGGTTCTTTTACAAATT+AGG + chr7_3:3859996-3860015 None:intergenic 25.0%
!!! TGTTTTTGTTTATTGCAGAT+GGG - chr7_3:3860487-3860506 Msa1090140:intron 25.0%
! AATGTACAATGAATTCAATG+TGG + chr7_3:3860550-3860569 None:intergenic 25.0%
! TTACCTGGTAAATGTTATAA+CGG - chr7_3:3860637-3860656 Msa1090140:intron 25.0%
! AATCATAGCATGAAATGAAA+GGG + chr7_3:3860855-3860874 None:intergenic 25.0%
!!! TTCTAGAACAATGTAGAAAA+GGG + chr7_3:3860903-3860922 None:intergenic 25.0%
! CAAAACTGTAATACAAGATA+AGG - chr7_3:3861099-3861118 Msa1090140:intron 25.0%
! AGAATATGTAAACCAAAACA+GGG + chr7_3:3861693-3861712 None:intergenic 25.0%
!!! TCATTTTGAAGATTTCCTTT+TGG - chr7_3:3861762-3861781 Msa1090140:CDS 25.0%
!! TTTATGTTATGACTTTTGTG+AGG - chr7_3:3861887-3861906 Msa1090140:five_prime_UTR 25.0%
AAATCTAGAAACTGAGGTAA+GGG + chr7_3:3856539-3856558 None:intergenic 30.0%
ATGTAGAAATCTAGAAACTG+AGG + chr7_3:3856545-3856564 None:intergenic 30.0%
CTAATTGGATTCGAGAATTT+AGG + chr7_3:3856588-3856607 None:intergenic 30.0%
! TTTTCGATCTTCGATCTAAT+TGG + chr7_3:3856603-3856622 None:intergenic 30.0%
! ATGAAAATCTAGGGTCAAAA+CGG + chr7_3:3856668-3856687 None:intergenic 30.0%
TGTTCTAATCTTCACAGTTA+TGG - chr7_3:3856819-3856838 Msa1090140:exon 30.0%
TAGGAGGTGAATTGTTAATA+TGG - chr7_3:3857186-3857205 Msa1090140:CDS 30.0%
AATATGGAAGCTACATTCAA+CGG - chr7_3:3857202-3857221 Msa1090140:CDS 30.0%
TGCTAACTAATTGTCGATAA+CGG - chr7_3:3857377-3857396 Msa1090140:CDS 30.0%
AATGCGATGATAAATAGAGA+AGG - chr7_3:3857434-3857453 Msa1090140:CDS 30.0%
ATGCGATGATAAATAGAGAA+GGG - chr7_3:3857435-3857454 Msa1090140:CDS 30.0%
!! AGAAGGGTATCAAAGAAAAA+AGG - chr7_3:3857451-3857470 Msa1090140:CDS 30.0%
TTTAAATGTAGAAGAAGCCA+AGG + chr7_3:3857667-3857686 None:intergenic 30.0%
!! TACTTCCATATCTACTTTTC+CGG + chr7_3:3857753-3857772 None:intergenic 30.0%
CATCAATTAGCTGGTTAAAA+TGG - chr7_3:3857878-3857897 Msa1090140:CDS 30.0%
AAGCAATATACTTCCCTAAA+GGG + chr7_3:3858191-3858210 None:intergenic 30.0%
!! TTGCAAGCATGTTATTTCTA+AGG - chr7_3:3858290-3858309 Msa1090140:intron 30.0%
GCCATTATTAAAGAATTCCA+AGG - chr7_3:3858320-3858339 Msa1090140:intron 30.0%
! TAGATATCTAAAGCTAACCT+TGG + chr7_3:3858340-3858359 None:intergenic 30.0%
! GTATTTGATTTCTCTGTAGA+TGG - chr7_3:3858365-3858384 Msa1090140:intron 30.0%
! GCTAATCTTCTAAAGAAAGA+GGG + chr7_3:3858469-3858488 None:intergenic 30.0%
! AGCTAATCTTCTAAAGAAAG+AGG + chr7_3:3858470-3858489 None:intergenic 30.0%
! CTTTCTTTAGAAGATTAGCT+TGG - chr7_3:3858470-3858489 Msa1090140:intron 30.0%
! ATCAAGATTAACTTCTGGTT+AGG + chr7_3:3858537-3858556 None:intergenic 30.0%
ATTGGATCAAGATTAACTTC+TGG + chr7_3:3858542-3858561 None:intergenic 30.0%
GTGAATAAGCTATTGCAATT+TGG - chr7_3:3858589-3858608 Msa1090140:intron 30.0%
TGTTATAAAACAGAGGATAG+GGG + chr7_3:3858775-3858794 None:intergenic 30.0%
CTGTTATAAAACAGAGGATA+GGG + chr7_3:3858776-3858795 None:intergenic 30.0%
TCTGTTATAAAACAGAGGAT+AGG + chr7_3:3858777-3858796 None:intergenic 30.0%
GTCCATTATATTTCATTCAC+AGG - chr7_3:3858922-3858941 Msa1090140:CDS 30.0%
ATATTTCATTCACAGGAAAG+TGG - chr7_3:3858929-3858948 Msa1090140:CDS 30.0%
ACAGTTCACTAAACAACAAA+GGG + chr7_3:3859038-3859057 None:intergenic 30.0%
! GATTTTGTAAGAACCTGAAA+TGG + chr7_3:3859186-3859205 None:intergenic 30.0%
CCCTTAAGCTTAAATAATAC+AGG + chr7_3:3859488-3859507 None:intergenic 30.0%
!! TATGTATAACTAGTTCTACG+TGG - chr7_3:3859543-3859562 Msa1090140:intron 30.0%
TTACAATTGAATTGCTTGAG+TGG - chr7_3:3859571-3859590 Msa1090140:intron 30.0%
TACAATTGAATTGCTTGAGT+GGG - chr7_3:3859572-3859591 Msa1090140:intron 30.0%
ATAACATAAACCTGTCTAAC+TGG + chr7_3:3859817-3859836 None:intergenic 30.0%
! ACTCTAACACTCTTTTATTG+GGG + chr7_3:3860263-3860282 None:intergenic 30.0%
! CACTCTAACACTCTTTTATT+GGG + chr7_3:3860264-3860283 None:intergenic 30.0%
! TCACTCTAACACTCTTTTAT+TGG + chr7_3:3860265-3860284 None:intergenic 30.0%
!!! CTGTTTTTGTTTATTGCAGA+TGG - chr7_3:3860486-3860505 Msa1090140:intron 30.0%
GAATCATAGCATGAAATGAA+AGG + chr7_3:3860856-3860875 None:intergenic 30.0%
!! CTTCTAGAACAATGTAGAAA+AGG + chr7_3:3860904-3860923 None:intergenic 30.0%
!! TGTTCTAGAAGAAAATGTCT+TGG - chr7_3:3860913-3860932 Msa1090140:intron 30.0%
AGAACATAAAGCTGATGATA+TGG - chr7_3:3861192-3861211 Msa1090140:CDS 30.0%
TATGGTCATTGAAGAAGTTA+CGG - chr7_3:3861210-3861229 Msa1090140:CDS 30.0%
TATTAGGAAAAATGAAGCAG+AGG - chr7_3:3861237-3861256 Msa1090140:intron 30.0%
AGATAAACCACAATCAACTT+CGG - chr7_3:3861456-3861475 Msa1090140:intron 30.0%
AATCATGGATCAATTGCAAT+AGG + chr7_3:3861580-3861599 None:intergenic 30.0%
CAGAATATGTAAACCAAAAC+AGG + chr7_3:3861694-3861713 None:intergenic 30.0%
AAACCTATGACTAAAACAAG+AGG + chr7_3:3861789-3861808 None:intergenic 30.0%
AAACTGTCATTGCCTTATAT+TGG - chr7_3:3861827-3861846 Msa1090140:five_prime_UTR 30.0%
GGAAAGAAAGAAAGGGAATT+TGG + chr7_3:3856518-3856537 None:intergenic 35.0%
AGGTAAGGGAAAGAAAGAAA+GGG + chr7_3:3856525-3856544 None:intergenic 35.0%
GAAATCTAGAAACTGAGGTA+AGG + chr7_3:3856540-3856559 None:intergenic 35.0%
GATCGAAGATCGAAAATGAA+AGG - chr7_3:3856607-3856626 Msa1090140:three_prime_UTR 35.0%
ATCGAAAATGAAAGGTGGAA+CGG - chr7_3:3856615-3856634 Msa1090140:three_prime_UTR 35.0%
! TGAAAATCTAGGGTCAAAAC+GGG + chr7_3:3856667-3856686 None:intergenic 35.0%
! TAATTGAATGATGGGAGTGA+AGG + chr7_3:3856754-3856773 None:intergenic 35.0%
TTATGGTCAGTTAAACCTTC+TGG - chr7_3:3856836-3856855 Msa1090140:CDS 35.0%
CTATGGACATAAGTAACTAC+TGG + chr7_3:3856878-3856897 None:intergenic 35.0%
TCTTAAGAACCTTCCATGTT+TGG + chr7_3:3857235-3857254 None:intergenic 35.0%
GGAAGGTTCTTAAGATGTTA+CGG - chr7_3:3857240-3857259 Msa1090140:CDS 35.0%
ATGCAAATAAGTGGTCATCA+AGG + chr7_3:3857285-3857304 None:intergenic 35.0%
ATAAGAACTTGAAATGTGGC+AGG - chr7_3:3857571-3857590 Msa1090140:intron 35.0%
CACATTTCAAACAAGCTGTA+AGG - chr7_3:3857638-3857657 Msa1090140:CDS 35.0%
TCTTTCCGGAAAAGTAGATA+TGG - chr7_3:3857745-3857764 Msa1090140:intron 35.0%
! GTTTTACTGCATCAATTAGC+TGG - chr7_3:3857869-3857888 Msa1090140:CDS 35.0%
CTGAATTAGATCTCATGTCA+AGG - chr7_3:3857909-3857928 Msa1090140:intron 35.0%
ATCTCATGTCAAGGACATTA+TGG - chr7_3:3857918-3857937 Msa1090140:intron 35.0%
!! GATGGTGGATATATCATATC+CGG - chr7_3:3857958-3857977 Msa1090140:intron 35.0%
GCAAGAATTATCAACTGATC+CGG + chr7_3:3857980-3857999 None:intergenic 35.0%
!! ATTGTAGTTCTGAACAAGCT+TGG - chr7_3:3858071-3858090 Msa1090140:intron 35.0%
! AGGTTAGTTCCTGACATAAA+TGG + chr7_3:3858120-3858139 None:intergenic 35.0%
GAAGCAATATACTTCCCTAA+AGG + chr7_3:3858192-3858211 None:intergenic 35.0%
AGTAAGCCCCATAAATCAAA+GGG - chr7_3:3858246-3858265 Msa1090140:intron 35.0%
! TCAACACCCTTTGATTTATG+GGG + chr7_3:3858255-3858274 None:intergenic 35.0%
! CTCAACACCCTTTGATTTAT+GGG + chr7_3:3858256-3858275 None:intergenic 35.0%
! TCTCAACACCCTTTGATTTA+TGG + chr7_3:3858257-3858276 None:intergenic 35.0%
ACAAGTAGAAATGAACCATC+TGG + chr7_3:3858499-3858518 None:intergenic 35.0%
TATTGCAATTTGGTAGAACC+TGG - chr7_3:3858599-3858618 Msa1090140:intron 35.0%
GCTTAAAGCTCTTAAAACTG+TGG - chr7_3:3858666-3858685 Msa1090140:intron 35.0%
! GTTAGGAGTTCTAATAACTC+GGG + chr7_3:3858714-3858733 None:intergenic 35.0%
! GGTTAGGAGTTCTAATAACT+CGG + chr7_3:3858715-3858734 None:intergenic 35.0%
! AGTGAGTAAAGCATTCAGTT+AGG + chr7_3:3858752-3858771 None:intergenic 35.0%
TGACAATATTCTGTTAGGAG+GGG + chr7_3:3858804-3858823 None:intergenic 35.0%
GTGACAATATTCTGTTAGGA+GGG + chr7_3:3858805-3858824 None:intergenic 35.0%
TGTGACAATATTCTGTTAGG+AGG + chr7_3:3858806-3858825 None:intergenic 35.0%
GACTGTGACAATATTCTGTT+AGG + chr7_3:3858809-3858828 None:intergenic 35.0%
TCACAGTCATCACATCAATT+GGG - chr7_3:3858821-3858840 Msa1090140:intron 35.0%
AGTTCACTAAACAACAAAGG+GGG + chr7_3:3859036-3859055 None:intergenic 35.0%
CAGTTCACTAAACAACAAAG+GGG + chr7_3:3859037-3859056 None:intergenic 35.0%
CACAGTTCACTAAACAACAA+AGG + chr7_3:3859039-3859058 None:intergenic 35.0%
AAGCTTAAGGGAACAAATTC+AGG - chr7_3:3859497-3859516 Msa1090140:intron 35.0%
ACCAAAACTCTCGAATTTCT+GGG - chr7_3:3859921-3859940 Msa1090140:CDS 35.0%
AGATCCACTCCTAATATAGT+GGG - chr7_3:3860221-3860240 Msa1090140:CDS 35.0%
TATTGGGGTAAAACTCATGT+AGG + chr7_3:3860248-3860267 None:intergenic 35.0%
!! AAGAGTGTTAGAGTGAGTAT+TGG - chr7_3:3860269-3860288 Msa1090140:CDS 35.0%
!! AAACGAATCATCGACTTGAT+CGG + chr7_3:3860378-3860397 None:intergenic 35.0%
TCTCCAATAGCAATATTTGC+TGG - chr7_3:3860588-3860607 Msa1090140:intron 35.0%
TACCAGGTAATATCTGTTAC+TGG + chr7_3:3860627-3860646 None:intergenic 35.0%
TAGCCGTTATAACATTTACC+AGG + chr7_3:3860643-3860662 None:intergenic 35.0%
GTAGTCCGTATTTGTTCAAA+AGG - chr7_3:3860717-3860736 Msa1090140:intron 35.0%
! GGTGACCTTTTGAACAAATA+CGG + chr7_3:3860725-3860744 None:intergenic 35.0%
!! AATGCTAAATAATGGGCATC+AGG + chr7_3:3860746-3860765 None:intergenic 35.0%
CGAGGAGAATGCTAAATAAT+GGG + chr7_3:3860753-3860772 None:intergenic 35.0%
TGCTTACTTGATAAGCAGTA+AGG + chr7_3:3860827-3860846 None:intergenic 35.0%
! CTATGATTCTAACTTGTACC+AGG - chr7_3:3860867-3860886 Msa1090140:intron 35.0%
GAAAAGGGAAATCAAAAACC+TGG + chr7_3:3860888-3860907 None:intergenic 35.0%
TCTAGAAGAAAATGTCTTGG+AGG - chr7_3:3860916-3860935 Msa1090140:intron 35.0%
! TGTAGCAGAAAGCATGAAAA+TGG - chr7_3:3861003-3861022 Msa1090140:intron 35.0%
! AGAAAGCATGAAAATGGAAG+TGG - chr7_3:3861009-3861028 Msa1090140:intron 35.0%
GAAAATGGAAGTGGAAGAAA+AGG - chr7_3:3861018-3861037 Msa1090140:intron 35.0%
ACGTGATCATCAAATCAACT+GGG - chr7_3:3861128-3861147 Msa1090140:intron 35.0%
ATCAAATCAACTGGGAATGT+TGG - chr7_3:3861136-3861155 Msa1090140:intron 35.0%
GTGCAATTATAGCTGACAAT+AGG - chr7_3:3861158-3861177 Msa1090140:intron 35.0%
AAGAAGTTACGGCAGATATT+AGG - chr7_3:3861221-3861240 Msa1090140:intron 35.0%
ACATGATCATTGAGACAACT+AGG - chr7_3:3861272-3861291 Msa1090140:intron 35.0%
ACAACTAGGACTGCAAATAT+TGG - chr7_3:3861286-3861305 Msa1090140:intron 35.0%
!! CGGTTTATTTTCTGTGTCTT+CGG + chr7_3:3861338-3861357 None:intergenic 35.0%
ACAGAAAATAAACCGCTTAG+TGG - chr7_3:3861343-3861362 Msa1090140:intron 35.0%
AATAAACCGCTTAGTGGTTT+AGG - chr7_3:3861349-3861368 Msa1090140:intron 35.0%
GGTTTAGGCAGTATTAATTC+TGG - chr7_3:3861364-3861383 Msa1090140:intron 35.0%
! TCTCTGGCATTGAAAAATCA+TGG + chr7_3:3861595-3861614 None:intergenic 35.0%
ACTAAAACAAGAGGTCCAAA+AGG + chr7_3:3861780-3861799 None:intergenic 35.0%
!! AGTTTGCTAACTAGGAAAGT+TGG + chr7_3:3861812-3861831 None:intergenic 35.0%
GAGGTAAGGGAAAGAAAGAA+AGG + chr7_3:3856526-3856545 None:intergenic 40.0%
CGAAGATCGAAAATGAAAGG+TGG - chr7_3:3856610-3856629 Msa1090140:three_prime_UTR 40.0%
GTGGAACGGTTCAGATTAAT+TGG - chr7_3:3856629-3856648 Msa1090140:three_prime_UTR 40.0%
GGAGAGAGGATGAAAATCTA+GGG + chr7_3:3856677-3856696 None:intergenic 40.0%
AGGAGAGAGGATGAAAATCT+AGG + chr7_3:3856678-3856697 None:intergenic 40.0%
GAGTACCTTGATGTCGAAAT+CGG + chr7_3:3856722-3856741 None:intergenic 40.0%
! AGCTTCTTTTGTGATCCAGA+AGG + chr7_3:3856854-3856873 None:intergenic 40.0%
AGCTATGATACGAGAGACTA+TGG + chr7_3:3856895-3856914 None:intergenic 40.0%
GTTATTCGCTTCTCTTCTTC+CGG - chr7_3:3856926-3856945 Msa1090140:CDS 40.0%
!! TTGTTAGCTTCTGGTTCTGA+TGG - chr7_3:3857050-3857069 Msa1090140:CDS 40.0%
AAGCTACATTCAACGGATAC+CGG - chr7_3:3857209-3857228 Msa1090140:CDS 40.0%
!! AAGTTGTTTTGCACGAACCT+AGG + chr7_3:3857539-3857558 None:intergenic 40.0%
!! TGTGGCAGGTTTTGTGAATT+TGG - chr7_3:3857585-3857604 Msa1090140:CDS 40.0%
!! GCAGGTTTTGTGAATTTGGT+TGG - chr7_3:3857589-3857608 Msa1090140:CDS 40.0%
AACAAGCTGTAAGGTTTCCT+TGG - chr7_3:3857647-3857666 Msa1090140:CDS 40.0%
TTCTGAACATGCCTTAACAG+TGG - chr7_3:3858045-3858064 Msa1090140:intron 40.0%
ACTACAATGCACCACTGTTA+AGG + chr7_3:3858059-3858078 None:intergenic 40.0%
GCACTTGTTCCATTTATGTC+AGG - chr7_3:3858108-3858127 Msa1090140:intron 40.0%
!! TTGCTTCTCTTAGTTCTGAC+CGG - chr7_3:3858205-3858224 Msa1090140:intron 40.0%
TGATGTAAATTCGGCAAGTC+CGG + chr7_3:3858227-3858246 None:intergenic 40.0%
GGGGCTTACTGATGTAAATT+CGG + chr7_3:3858236-3858255 None:intergenic 40.0%
CAGTAAGCCCCATAAATCAA+AGG - chr7_3:3858245-3858264 Msa1090140:intron 40.0%
TTGTCACATACACTGACATC+AGG - chr7_3:3858389-3858408 Msa1090140:intron 40.0%
AAGAGGGCAATGTTTCATCA+TGG + chr7_3:3858453-3858472 None:intergenic 40.0%
TTGGTAGAACCTGGAAAATC+AGG - chr7_3:3858608-3858627 Msa1090140:intron 40.0%
! AGTTGTTTGCCTGATTTTCC+AGG + chr7_3:3858620-3858639 None:intergenic 40.0%
!! AGTTAGGAGAAAGTACTCTC+TGG + chr7_3:3858736-3858755 None:intergenic 40.0%
GTCACAGTCATCACATCAAT+TGG - chr7_3:3858820-3858839 Msa1090140:intron 40.0%
AGGATACTGAATTTGGGCTT+TGG + chr7_3:3858847-3858866 None:intergenic 40.0%
AGCTAAGCAGGAATCCATAA+AGG + chr7_3:3859119-3859138 None:intergenic 40.0%
! CTCACGTCACTAACATGTTT+TGG + chr7_3:3859381-3859400 None:intergenic 40.0%
ACCATTCACTTTGAACCTCT+AGG + chr7_3:3859789-3859808 None:intergenic 40.0%
GACCAAAACTCTCGAATTTC+TGG - chr7_3:3859920-3859939 Msa1090140:CDS 40.0%
! TCCCAGAAATTCGAGAGTTT+TGG + chr7_3:3859925-3859944 None:intergenic 40.0%
!! AACTCTCGAATTTCTGGGAT+AGG - chr7_3:3859926-3859945 Msa1090140:CDS 40.0%
AATCACTTCACAGTTATCGC+AGG + chr7_3:3860025-3860044 None:intergenic 40.0%
!! TTGGTGATCTCCCGTTTTAT+CGG - chr7_3:3860198-3860217 Msa1090140:CDS 40.0%
GAGATCCACTCCTAATATAG+TGG - chr7_3:3860220-3860239 Msa1090140:CDS 40.0%
CATGTAGGTCCCACTATATT+AGG + chr7_3:3860233-3860252 None:intergenic 40.0%
!! AACGAATCATCGACTTGATC+GGG + chr7_3:3860377-3860396 None:intergenic 40.0%
TAAAGTTCTGCCTCTTTCAG+AGG - chr7_3:3860437-3860456 Msa1090140:CDS 40.0%
CGGCAAATACAATGCGATAT+GGG + chr7_3:3860524-3860543 None:intergenic 40.0%
ACGGCAAATACAATGCGATA+TGG + chr7_3:3860525-3860544 None:intergenic 40.0%
ATATCGCATTGTATTTGCCG+TGG - chr7_3:3860524-3860543 Msa1090140:intron 40.0%
CAATGAATTCAATGTGGCCA+CGG + chr7_3:3860544-3860563 None:intergenic 40.0%
AGGCCAGCAAATATTGCTAT+TGG + chr7_3:3860594-3860613 None:intergenic 40.0%
CTCCAGTAACAGATATTACC+TGG - chr7_3:3860622-3860641 Msa1090140:intron 40.0%
GCGAGGAGAATGCTAAATAA+TGG + chr7_3:3860754-3860773 None:intergenic 40.0%
GAGTTCGAAAATGACGAACT+TGG - chr7_3:3860797-3860816 Msa1090140:intron 40.0%
!! GGAAGAAAAGGTTGATGACA+TGG - chr7_3:3861030-3861049 Msa1090140:intron 40.0%
!! ATAGAAGCATCTGCGGATAT+TGG - chr7_3:3861055-3861074 Msa1090140:intron 40.0%
!! TAGAAGCATCTGCGGATATT+GGG - chr7_3:3861056-3861075 Msa1090140:intron 40.0%
GACGTGATCATCAAATCAAC+TGG - chr7_3:3861127-3861146 Msa1090140:intron 40.0%
GAAAAATGAAGCAGAGGAGA+AGG - chr7_3:3861243-3861262 Msa1090140:intron 40.0%
ATACTGCCTAAACCACTAAG+CGG + chr7_3:3861358-3861377 None:intergenic 40.0%
AAACAACCAGCTAATCCAGA+TGG - chr7_3:3861406-3861425 Msa1090140:intron 40.0%
!! TGTTTACCATCTGGATTAGC+TGG + chr7_3:3861415-3861434 None:intergenic 40.0%
! GCTTCACTTTGTTTACCATC+TGG + chr7_3:3861424-3861443 None:intergenic 40.0%
ACAAAGTGAAGCAGAAGAGA+AGG - chr7_3:3861432-3861451 Msa1090140:intron 40.0%
TTCGGACAGCATAAAATCTG+AGG - chr7_3:3861474-3861493 Msa1090140:intron 40.0%
ACAAAAAAGATGTACACGGG+CGG + chr7_3:3861632-3861651 None:intergenic 40.0%
CGCACAAAAAAGATGTACAC+GGG + chr7_3:3861635-3861654 None:intergenic 40.0%
CCGCACAAAAAAGATGTACA+CGG + chr7_3:3861636-3861655 None:intergenic 40.0%
!!! CCGTGTACATCTTTTTTGTG+CGG - chr7_3:3861633-3861652 Msa1090140:intron 40.0%
!!! GGACCTCTTGTTTTAGTCAT+AGG - chr7_3:3861783-3861802 Msa1090140:exon 40.0%
!! GCAATGACAGTTTGCTAACT+AGG + chr7_3:3861820-3861839 None:intergenic 40.0%
TGTGCTGTCTTGCCAATATA+AGG + chr7_3:3861842-3861861 None:intergenic 40.0%
! TCAGGGGAATTGTTAGCTTC+TGG - chr7_3:3857041-3857060 Msa1090140:CDS 45.0%
AAGAACCTTCCATGTTTGGC+CGG + chr7_3:3857231-3857250 None:intergenic 45.0%
TGTCAAGGACATTATGGACC+TGG - chr7_3:3857924-3857943 Msa1090140:intron 45.0%
AGGAACTAACCTTCAGACGT+TGG - chr7_3:3858128-3858147 Msa1090140:intron 45.0%
TACCCATGCACACTATGTTC+AGG - chr7_3:3858152-3858171 Msa1090140:intron 45.0%
ACCCATGCACACTATGTTCA+GGG - chr7_3:3858153-3858172 Msa1090140:intron 45.0%
!! AGATTAGCTTGGTCTCCAGA+TGG - chr7_3:3858481-3858500 Msa1090140:intron 45.0%
TCATTTCTACTTGTGCCTGC+AGG - chr7_3:3858505-3858524 Msa1090140:intron 45.0%
!! GGAGAAAGTACTCTCTGGTT+AGG + chr7_3:3858731-3858750 None:intergenic 45.0%
GGGGGAAATTAAAAGCTGTC+TGG + chr7_3:3859018-3859037 None:intergenic 45.0%
CCATGTAGCAAAAGCTAAGC+AGG + chr7_3:3859131-3859150 None:intergenic 45.0%
!! CCTGCTTAGCTTTTGCTACA+TGG - chr7_3:3859128-3859147 Msa1090140:intron 45.0%
TTCACGTCTCTACCCATTTC+AGG - chr7_3:3859170-3859189 Msa1090140:CDS 45.0%
TATAGCAGGCCTGCATATCA+AGG + chr7_3:3859420-3859439 None:intergenic 45.0%
ACAACAGCTTTGCTTGCACA+CGG + chr7_3:3859449-3859468 None:intergenic 45.0%
TGAATTGCTTGAGTGGGATG+TGG - chr7_3:3859578-3859597 Msa1090140:intron 45.0%
CATCATGGACCAGTTTGACT+GGG - chr7_3:3859643-3859662 Msa1090140:intron 45.0%
AAATAGGCATGCTGACGAAC+TGG - chr7_3:3859700-3859719 Msa1090140:intron 45.0%
! ACTGGTTCATGTCACAAAGC+CGG - chr7_3:3859718-3859737 Msa1090140:intron 45.0%
GAGGTCTAACAATTCTTCGC+CGG + chr7_3:3859740-3859759 None:intergenic 45.0%
GCCTAGAGGTTCAAAGTGAA+TGG - chr7_3:3859785-3859804 Msa1090140:intron 45.0%
ATGGTCTGAACCAGTTAGAC+AGG - chr7_3:3859804-3859823 Msa1090140:intron 45.0%
GTTATCGCAGGACAGAGAAT+GGG + chr7_3:3860013-3860032 None:intergenic 45.0%
AGTTATCGCAGGACAGAGAA+TGG + chr7_3:3860014-3860033 None:intergenic 45.0%
GAGTGGATCTCCGATAAAAC+GGG + chr7_3:3860211-3860230 None:intergenic 45.0%
GGAGTGGATCTCCGATAAAA+CGG + chr7_3:3860212-3860231 None:intergenic 45.0%
AGGTCCCACTATATTAGGAG+TGG + chr7_3:3860228-3860247 None:intergenic 45.0%
!! ACGAATCATCGACTTGATCG+GGG + chr7_3:3860376-3860395 None:intergenic 45.0%
! GACAATGCATCCTCTGAAAG+AGG + chr7_3:3860450-3860469 None:intergenic 45.0%
CTGTTACTGGAGCATAGTGA+AGG + chr7_3:3860614-3860633 None:intergenic 45.0%
TTAGCATTCTCCTCGCAAGA+TGG - chr7_3:3860758-3860777 Msa1090140:intron 45.0%
GCAAGATGGTTTCTGCTCTT+TGG - chr7_3:3860772-3860791 Msa1090140:intron 45.0%
AGATGGTTTCTGCTCTTTGG+TGG - chr7_3:3860775-3860794 Msa1090140:intron 45.0%
! AGCATCATTGGCTGTCTGAA+GGG + chr7_3:3860954-3860973 None:intergenic 45.0%
AGTTGGCAGTACAGCATCAT+TGG + chr7_3:3860966-3860985 None:intergenic 45.0%
AATGATGCTGTACTGCCAAC+TGG - chr7_3:3860965-3860984 Msa1090140:intron 45.0%
ATGATGCTGTACTGCCAACT+GGG - chr7_3:3860966-3860985 Msa1090140:intron 45.0%
!! CATGGACATAGAAGCATCTG+CGG - chr7_3:3861048-3861067 Msa1090140:intron 45.0%
!! AGAAGCATCTGCGGATATTG+GGG - chr7_3:3861057-3861076 Msa1090140:intron 45.0%
!! TAATTCTGGAGCCGAAGAGA+AGG - chr7_3:3861378-3861397 Msa1090140:intron 45.0%
TTGTTTCGACGCCTTCTCTT+CGG + chr7_3:3861392-3861411 None:intergenic 45.0%
! ATGCTGTCCGAAGTTGATTG+TGG + chr7_3:3861466-3861485 None:intergenic 45.0%
!! CTGGCTGGCTTATTTGTGAT+GGG + chr7_3:3861544-3861563 None:intergenic 45.0%
AATAGGTGTAATGCGCTTCC+TGG + chr7_3:3861563-3861582 None:intergenic 45.0%
AAAACAGGGAGCAACAAGAG+GGG + chr7_3:3861679-3861698 None:intergenic 45.0%
CAAAACAGGGAGCAACAAGA+GGG + chr7_3:3861680-3861699 None:intergenic 45.0%
GAAAGGGAATTTGGCGCTCT+TGG + chr7_3:3856509-3856528 None:intergenic 50.0%
AGGACATTATGGACCTGGAG+TGG - chr7_3:3857929-3857948 Msa1090140:intron 50.0%
CATGGGTATCCAACGTCTGA+AGG + chr7_3:3858140-3858159 None:intergenic 50.0%
CCCCTGAACATAGTGTGCAT+GGG + chr7_3:3858157-3858176 None:intergenic 50.0%
CCCATGCACACTATGTTCAG+GGG - chr7_3:3858154-3858173 Msa1090140:intron 50.0%
CCATGCACACTATGTTCAGG+GGG - chr7_3:3858155-3858174 Msa1090140:intron 50.0%
ATACTTCCCTAAAGGGTCCC+AGG + chr7_3:3858184-3858203 None:intergenic 50.0%
CTGGTTAGGTGAATACCTGC+AGG + chr7_3:3858523-3858542 None:intergenic 50.0%
TCACAGGAAAGTGGACGAAG+TGG - chr7_3:3858938-3858957 Msa1090140:CDS 50.0%
CCAGTCAAACTGGTCCATGA+TGG + chr7_3:3859645-3859664 None:intergenic 50.0%
CCATCATGGACCAGTTTGAC+TGG - chr7_3:3859642-3859661 Msa1090140:intron 50.0%
AGTGCTAGCAACACTCACTC+TGG - chr7_3:3860118-3860137 Msa1090140:CDS 50.0%
!! ATCGACTTGATCGGGGTACA+AGG + chr7_3:3860369-3860388 None:intergenic 50.0%
AGAGCAGAAACCATCTTGCG+AGG + chr7_3:3860771-3860790 None:intergenic 50.0%
! CAGCATCATTGGCTGTCTGA+AGG + chr7_3:3860955-3860974 None:intergenic 50.0%
! TCTGAGGCAGCACAAAAGAC+AGG - chr7_3:3861490-3861509 Msa1090140:CDS 50.0%
CTGAGGCAGCACAAAAGACA+GGG - chr7_3:3861491-3861510 Msa1090140:CDS 50.0%
!! CCTGGCTGGCTTATTTGTGA+TGG + chr7_3:3861545-3861564 None:intergenic 50.0%
CCATCACAAATAAGCCAGCC+AGG - chr7_3:3861542-3861561 Msa1090140:CDS 50.0%
GGACGTTAATGGAGCTTCTC+TGG + chr7_3:3861611-3861630 None:intergenic 50.0%
! CAACAAGAGGGGGGATGTTT+TGG + chr7_3:3861668-3861687 None:intergenic 50.0%
AAACAGGGAGCAACAAGAGG+GGG + chr7_3:3861678-3861697 None:intergenic 50.0%
CCAAAACAGGGAGCAACAAG+AGG + chr7_3:3861681-3861700 None:intergenic 50.0%
! CCTCTTGTTGCTCCCTGTTT+TGG - chr7_3:3861678-3861697 Msa1090140:intron 50.0%
CTTGATGTCGAAATCGGCGC+CGG + chr7_3:3856716-3856735 None:intergenic 55.0%
CAACGGATACCGGCCAAACA+TGG - chr7_3:3857219-3857238 Msa1090140:CDS 55.0%
GGATACCGGCCAAACATGGA+AGG - chr7_3:3857223-3857242 Msa1090140:CDS 55.0%
GACCTGGAGTGGTCTACTGA+TGG - chr7_3:3857940-3857959 Msa1090140:intron 55.0%
CACCATCAGTAGACCACTCC+AGG + chr7_3:3857945-3857964 None:intergenic 55.0%
CTGGAGTGGTCTACTGATGG+TGG - chr7_3:3857943-3857962 Msa1090140:intron 55.0%
CCCCCTGAACATAGTGTGCA+TGG + chr7_3:3858158-3858177 None:intergenic 55.0%
ACTATGTTCAGGGGGTAGCC+TGG - chr7_3:3858163-3858182 Msa1090140:intron 55.0%
CTATGTTCAGGGGGTAGCCT+GGG - chr7_3:3858164-3858183 Msa1090140:intron 55.0%
GCACACGGAAGCTGTATAGC+AGG + chr7_3:3859434-3859453 None:intergenic 55.0%
TGTCCAGCTCCCAGTCAAAC+TGG + chr7_3:3859655-3859674 None:intergenic 55.0%
GATTGTGAGAGGCAGCCTAG+AGG - chr7_3:3859771-3859790 Msa1090140:intron 55.0%
! GTACTGCCAACTGGGAGTGT+TGG - chr7_3:3860974-3860993 Msa1090140:intron 55.0%
ACTGCACCAACACTCCCAGT+TGG + chr7_3:3860983-3861002 None:intergenic 55.0%
GATGGGCGTGCTCTTTGAAC+TGG + chr7_3:3861527-3861546 None:intergenic 55.0%
TGTACACGGGCGGACGTTAA+TGG + chr7_3:3861622-3861641 None:intergenic 55.0%
AACAGGGAGCAACAAGAGGG+GGG + chr7_3:3861677-3861696 None:intergenic 55.0%
!! CGGCGCCGATTTCGACATCA+AGG - chr7_3:3856714-3856733 Msa1090140:three_prime_UTR 60.0%
GGGTAGCCTGGGACCCTTTA+GGG - chr7_3:3858175-3858194 Msa1090140:intron 60.0%
GGACCAGTTTGACTGGGAGC+TGG - chr7_3:3859649-3859668 Msa1090140:intron 60.0%
CTGGGAGCTGGACACATGTC+TGG - chr7_3:3859661-3859680 Msa1090140:intron 60.0%
GGTGTAATGCGCTTCCTGGC+TGG + chr7_3:3861559-3861578 None:intergenic 60.0%
GTGGCGAGAGTGGAGGAGAG+AGG + chr7_3:3856691-3856710 None:intergenic 65.0%
! GATGTCGAAATCGGCGCCGG+CGG + chr7_3:3856713-3856732 None:intergenic 65.0%
GGGGTAGCCTGGGACCCTTT+AGG - chr7_3:3858174-3858193 Msa1090140:intron 65.0%
TCCTCCACTCTCGCCACCGC+CGG - chr7_3:3856694-3856713 Msa1090140:three_prime_UTR 70.0%
!! GTCGAAATCGGCGCCGGCGG+TGG + chr7_3:3856710-3856729 None:intergenic 75.0%
! GCCGGCGGTGGCGAGAGTGG+AGG + chr7_3:3856698-3856717 None:intergenic 80.0%
!!! GGCGCCGGCGGTGGCGAGAG+TGG + chr7_3:3856701-3856720 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 3856505 3861917 3856505 ID=Msa1090140;Name=Msa1090140
chr7_3 mRNA 3856505 3861917 3856505 ID=Msa1090140-mRNA-1;Parent=Msa1090140;Name=Msa1090140-mRNA-1;_AED=0.17;_eAED=0.17;_QI=117|1|1|1|0.90|0.91|12|320|605
chr7_3 exon 3856505 3857501 3856505 ID=Msa1090140-mRNA-1:exon:1501;Parent=Msa1090140-mRNA-1
chr7_3 exon 3857583 3857683 3857583 ID=Msa1090140-mRNA-1:exon:1500;Parent=Msa1090140-mRNA-1
chr7_3 exon 3857779 3857917 3857779 ID=Msa1090140-mRNA-1:exon:1499;Parent=Msa1090140-mRNA-1
chr7_3 exon 3858904 3858992 3858904 ID=Msa1090140-mRNA-1:exon:1498;Parent=Msa1090140-mRNA-1
chr7_3 exon 3859158 3859230 3859158 ID=Msa1090140-mRNA-1:exon:1497;Parent=Msa1090140-mRNA-1
chr7_3 exon 3859896 3859992 3859896 ID=Msa1090140-mRNA-1:exon:1496;Parent=Msa1090140-mRNA-1
chr7_3 exon 3860081 3860292 3860081 ID=Msa1090140-mRNA-1:exon:1495;Parent=Msa1090140-mRNA-1
chr7_3 exon 3860401 3860504 3860401 ID=Msa1090140-mRNA-1:exon:1494;Parent=Msa1090140-mRNA-1
chr7_3 exon 3861161 3861233 3861161 ID=Msa1090140-mRNA-1:exon:1493;Parent=Msa1090140-mRNA-1
chr7_3 exon 3861351 3861377 3861351 ID=Msa1090140-mRNA-1:exon:1492;Parent=Msa1090140-mRNA-1
chr7_3 exon 3861475 3861586 3861475 ID=Msa1090140-mRNA-1:exon:1491;Parent=Msa1090140-mRNA-1
chr7_3 exon 3861687 3861917 3861687 ID=Msa1090140-mRNA-1:exon:1490;Parent=Msa1090140-mRNA-1
chr7_3 five_prime_UTR 3861801 3861917 3861801 ID=Msa1090140-mRNA-1:five_prime_utr;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3861687 3861800 3861687 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3861475 3861586 3861475 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3861351 3861377 3861351 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3861161 3861233 3861161 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3860401 3860504 3860401 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3860081 3860292 3860081 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3859896 3859992 3859896 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3859158 3859230 3859158 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3858904 3858992 3858904 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3857779 3857917 3857779 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3857583 3857683 3857583 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 CDS 3856825 3857501 3856825 ID=Msa1090140-mRNA-1:cds;Parent=Msa1090140-mRNA-1
chr7_3 three_prime_UTR 3856505 3856824 3856505 ID=Msa1090140-mRNA-1:three_prime_utr;Parent=Msa1090140-mRNA-1
Gene Sequence

>Msa1090140

ATGAAAGGTGGAACGGTTCAGATTAATTGGCACGAGAGCAAACCCGTTTTGACCCTAGATTTTCATCCTCTCTCCTCCACTCTCGCCACCGCCGGCGCCGATTTCGACATCAAGTTATGGTCAGTTAAACCTTCTGGATCACAAAAGAAGCTTCCAGTAGTTACTTATGTCCATAGTCTCTCGTATCATAGCTCTGCTGTTAATGTTATTCGCTTCTCTTCTTCCGGGGAATTGTTAGCTTCTGGTTCTGATGGAGGTGAATTGTTAATATGGAAGCTACATTCAACGGATACCGGCCAAACATGGAAGGTTCTTAAGATGTTACGATCTCATGTCAAGGACATTATGGACCTGGAGTGGTCTACTGATGGTGGATATATCATATCCGGATCAGTTGATAATTCTTGCATTATATGGGATGTTAACAAAGGAACTAACCTTCAGACGTTGGATACCCATGCACACTATGTTCAGGGGGTAGCCTGGGACCCTTTAGGGAAGTATATTGCTTCTCTTAGTTCTGACCGGACTTGCCGAATTTACATCAGTAAGCCCCATAAATCAAAGGGTGTTGAGAGAATCAATTACGCTTGCAAGCATGTTATTTCTAAGGCAGAACAGCCATTATTAAAGAATTCCAAGTCGACAAAATATCATCTCTTCCATGATGAAACATTGCCCTCTTTCTTTAGAAGATTAGCTTGGTCTCCAGATGGTTCATTTCTACTTGTGCCTGCAGGTTCTTACAAAATCGGTACAGCGTCTGAATCTGTAAATGCAGCTTACATATTTTCTAGAAAAGATCTTTCTCGGCCTGCTATACAGCTTCCGTGTGCAAGCAAAGCTGTTGTAGCTGTTCGATTCTGTCCTGTATTATTTAAGCTTAAGGGAACAAATTCAGATGGGTTATTTAAGCTCCCATATCGCATTGTATTTGCCGTGGCCACATTGAATTCATTGTACATTTATGACACTGAGAACACTTCTCCAATAGCAATATTTGCTGGCCTTCACTATGCTCCAGTAACAGATATTACCTGGTCACCTGATGCCCATTATTTAGCATTCTCCTCGCAAGATGGTTTCTGCTCTTTGGTGGAGTTCGAAAATGACGAACTTGGATCACCTTACTGCTTATCAAAAGAAAATGTCTTGGAGGACAGTAAAAGCACCCTTCAGACAGCCAATGATGCTGTACTGCCAACTGGGAGTGTTGGTGCAGTTGTAGCAGAAAGCATGAAAATGGAAGTGGAAGAAAAGGTTGATGACATGGACATAGAAGCATCTGCGGATATTGGGGCAGTCACATCAGAAAGCAGCAAAACTGTAATACAAGATAAGGCTGATGACGTGATCATCAAATCAACTGGGAATGTTGGTGCAATTATAGCTGACAATAGGAAAAATGAAGCAGAACATAAAGCTGATGATATGGTCATTGAAGAAGTTACGGCAGATATTAGGAAAAATGAAGCAGAGGAGAAGGCTGCTGACATGATCATTGAGACAACTAGGACTGCAAATATTGGAGCAGCTCTATTAGATAATAGAAAAACCGAAGACACAGAAAATAAACCGCTTAGTGGTTTAGGCAGTATTAATTCTGGAGCCGAAGAGAAGGCGTCGAAACAACCAGCTAATCCAGATGGTAAACAAAGTGAAGCAGAAGAGAAGGCAGATAAACCACAATCAACTTCGGACAGCATAAAATCTGAGGCAGCACAAAAGACAGGGAATCAATCGTCCAGTTCAAAGAGCACGCCCATCACAAATAAGCCAGCCAGGAAGCGCATTACACCTATTGCAATTGATCCATGA
Protein sequence

>Msa1090140

MKGGTVQINWHESKPVLTLDFHPLSSTLATAGADFDIKLWSVKPSGSQKKLPVVTYVHSLSYHSSAVNVIRFSSSGELLASGSDGGELLIWKLHSTDTGQTWKVLKMLRSHVKDIMDLEWSTDGGYIISGSVDNSCIIWDVNKGTNLQTLDTHAHYVQGVAWDPLGKYIASLSSDRTCRIYISKPHKSKGVERINYACKHVISKAEQPLLKNSKSTKYHLFHDETLPSFFRRLAWSPDGSFLLVPAGSYKIGTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPVLFKLKGTNSDGLFKLPYRIVFAVATLNSLYIYDTENTSPIAIFAGLHYAPVTDITWSPDAHYLAFSSQDGFCSLVEFENDELGSPYCLSKENVLEDSKSTLQTANDAVLPTGSVGAVVAESMKMEVEEKVDDMDIEASADIGAVTSESSKTVIQDKADDVIIKSTGNVGAIIADNRKNEAEHKADDMVIEEVTADIRKNEAEEKAADMIIETTRTANIGAALLDNRKTEDTENKPLSGLGSINSGAEEKASKQPANPDGKQSEAEEKADKPQSTSDSIKSEAAQKTGNQSSSSKSTPITNKPARKRITPIAIDP*