Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512140 | XP_024635252.1 | 96.429 | 616 | 22 | 0 | 1 | 616 | 1 | 616 | 0.0 | 1238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512140 | sp|P36627|BYR3_SCHPO | 34.463 | 177 | 88 | 7 | 147 | 314 | 19 | 176 | 1.95e-19 | 89.7 |
| Msa0512140 | sp|P36627|BYR3_SCHPO | 30.729 | 192 | 94 | 4 | 169 | 355 | 19 | 176 | 2.42e-16 | 80.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512140 | A0A396IXW8 | 89.773 | 616 | 22 | 1 | 1 | 616 | 1 | 575 | 0.0 | 1134 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016540 | Msa0512140 | 0.811177 | 7.975517e-51 | -8.615850e-47 |
| Msa0068000 | Msa0512140 | 0.809521 | 1.816113e-50 | -8.615850e-47 |
| Msa0199030 | Msa0512140 | 0.803881 | 2.820790e-49 | -8.615850e-47 |
| Msa0395980 | Msa0512140 | 0.806478 | 8.067030e-50 | -8.615850e-47 |
| Msa0440510 | Msa0512140 | 0.816361 | 5.753515e-52 | -8.615850e-47 |
| Msa0245430 | Msa0512140 | 0.806371 | 8.497417e-50 | -8.615850e-47 |
| Msa0307860 | Msa0512140 | 0.803986 | 2.683151e-49 | -8.615850e-47 |
| Msa0311720 | Msa0512140 | 0.807455 | 5.011628e-50 | -8.615850e-47 |
| Msa0362890 | Msa0512140 | 0.808964 | 2.390464e-50 | -8.615850e-47 |
| Msa0512140 | Msa1072600 | 0.832818 | 7.606543e-56 | -8.615850e-47 |
| Msa0512140 | Msa1211340 | 0.804486 | 2.111282e-49 | -8.615850e-47 |
| Msa0512140 | Msa1259640 | 0.807686 | 4.477679e-50 | -8.615850e-47 |
| Msa0512140 | Msa1403560 | 0.810081 | 1.375929e-50 | -8.615850e-47 |
| Msa0512140 | Msa1411950 | 0.805248 | 1.463277e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512140 | MtrunA17_Chr3g0119021 | 89.773 | 616 | 22 | 1 | 1 | 616 | 1 | 575 | 0.0 | 1134 |
| Msa0512140 | MtrunA17_Chr5g0439981 | 61.238 | 307 | 112 | 3 | 115 | 419 | 250 | 551 | 6.86e-130 | 395 |
| Msa0512140 | MtrunA17_Chr5g0439981 | 25.758 | 396 | 233 | 16 | 217 | 596 | 283 | 633 | 2.51e-16 | 82.8 |
| Msa0512140 | MtrunA17_Chr3g0080991 | 34.322 | 236 | 108 | 7 | 146 | 352 | 1458 | 1675 | 2.58e-26 | 115 |
| Msa0512140 | MtrunA17_Chr3g0080991 | 28.641 | 206 | 109 | 5 | 169 | 352 | 1986 | 2175 | 1.20e-15 | 81.3 |
| Msa0512140 | MtrunA17_Chr3g0080991 | 28.821 | 229 | 102 | 7 | 146 | 313 | 1985 | 2213 | 1.99e-15 | 80.5 |
| Msa0512140 | MtrunA17_Chr3g0080991 | 28.889 | 180 | 86 | 4 | 187 | 352 | 1985 | 2136 | 1.18e-11 | 68.2 |
| Msa0512140 | MtrunA17_Chr3g0145151 | 28.571 | 252 | 114 | 11 | 136 | 351 | 34 | 255 | 9.77e-12 | 65.9 |
| Msa0512140 | MtrunA17_Chr1g0203191 | 31.148 | 122 | 71 | 3 | 169 | 281 | 69 | 186 | 2.83e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0512140 | AT3G43590.1 | 43.885 | 417 | 184 | 10 | 45 | 424 | 44 | 447 | 9.58e-101 | 317 |
| Msa0512140 | AT5G36240.1 | 45.545 | 101 | 51 | 1 | 216 | 316 | 27 | 123 | 1.18e-23 | 100 |
| Msa0512140 | AT3G43490.1 | 36.646 | 161 | 88 | 5 | 38 | 184 | 23 | 183 | 1.61e-20 | 92.0 |
| Msa0512140 | AT4G36020.1 | 25.714 | 315 | 160 | 10 | 67 | 352 | 27 | 296 | 2.04e-17 | 84.0 |
| Msa0512140 | AT4G36020.3 | 25.714 | 315 | 160 | 10 | 67 | 352 | 27 | 296 | 2.04e-17 | 84.0 |
| Msa0512140 | AT2G17870.1 | 26.298 | 289 | 154 | 9 | 67 | 312 | 27 | 299 | 8.84e-15 | 75.9 |
| Msa0512140 | AT1G75560.2 | 32.828 | 198 | 102 | 6 | 134 | 313 | 63 | 247 | 7.46e-14 | 72.4 |
| Msa0512140 | AT1G75560.1 | 32.828 | 198 | 102 | 6 | 134 | 313 | 63 | 247 | 7.46e-14 | 72.4 |
| Msa0512140 | AT4G36020.2 | 29.000 | 200 | 87 | 6 | 169 | 352 | 102 | 262 | 4.28e-13 | 70.5 |
| Msa0512140 | AT4G36020.2 | 26.374 | 273 | 138 | 9 | 67 | 312 | 27 | 263 | 8.37e-13 | 69.3 |
Find 201 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCCTACTCTTAGATTTCTT+TGG | 0.143023 | 3_4:+61766390 | None:intergenic |
| ACCTCTGCTCTTCGATTTCT+TGG | 0.162405 | 3_4:+61766320 | None:intergenic |
| CCCTACTCTTAGATTTCTTT+GGG | 0.182793 | 3_4:+61766391 | None:intergenic |
| CCTCTCCTCTTTGATTTCTT+AGG | 0.205680 | 3_4:+61766528 | None:intergenic |
| TGTTATATCTGTAAGCTATT+TGG | 0.213807 | 3_4:-61768533 | Msa0512140:CDS |
| TTGGAGTTCTAAAATTTCTA+AGG | 0.248055 | 3_4:-61766097 | Msa0512140:CDS |
| TGCTTGAAGTGTGGAAATTC+TGG | 0.255080 | 3_4:-61768752 | Msa0512140:CDS |
| TGGAACTCCGACCGAATTCT+AGG | 0.257138 | 3_4:-61770112 | Msa0512140:five_prime_UTR |
| CCTCTGCTCTTCGATTTCTT+GGG | 0.268801 | 3_4:+61766321 | None:intergenic |
| ACCTCTGCTCTTGAATTTCA+TGG | 0.321755 | 3_4:+61766251 | None:intergenic |
| CATGGTAGAAGTATTGTAAA+TGG | 0.323082 | 3_4:+61765605 | None:intergenic |
| CCAACACATACACTTTGATT+TGG | 0.326938 | 3_4:+61769827 | None:intergenic |
| AAGAGTAGGGGCGGCTGGAC+GGG | 0.330423 | 3_4:-61766378 | Msa0512140:CDS |
| AGAGTAGGGGCGGCTGGACG+GGG | 0.330892 | 3_4:-61766377 | Msa0512140:CDS |
| TTGGTCTGCACCTCTCGATA+TGG | 0.332692 | 3_4:-61766604 | Msa0512140:CDS |
| ACCCTGCTACATATCTTAAA+AGG | 0.337895 | 3_4:+61765652 | None:intergenic |
| GAGAATGCACAAGTTCTATC+AGG | 0.341187 | 3_4:-61766952 | Msa0512140:CDS |
| CTGAGGTGTGCTGTAAGATT+AGG | 0.341520 | 3_4:-61770152 | Msa0512140:five_prime_UTR |
| CTTGAGACTCAGATCTTGAT+TGG | 0.346562 | 3_4:+61769964 | None:intergenic |
| CGTGCAGTCATGTGCTTCTC+TGG | 0.357612 | 3_4:+61768797 | None:intergenic |
| TGCTGCAAAACAATGTTCTA+AGG | 0.360499 | 3_4:-61768943 | Msa0512140:intron |
| CCTTGGGAATATGAGGCTTC+AGG | 0.367415 | 3_4:+61766057 | None:intergenic |
| AGGTAAAACGGCGTCGTTAG+AGG | 0.370608 | 3_4:+61769901 | None:intergenic |
| GTAAAGCTTCTTTCTTCTGT+AGG | 0.375344 | 3_4:+61766417 | None:intergenic |
| TGAGGTGTGCTGTAAGATTA+GGG | 0.375516 | 3_4:-61770151 | Msa0512140:five_prime_UTR |
| ACTCTAGTGGTGAAGGATAT+AGG | 0.378837 | 3_4:-61765936 | Msa0512140:CDS |
| CCACACCTACTTTGTGCTAT+AGG | 0.378910 | 3_4:-61767000 | Msa0512140:CDS |
| TTCAGTTCGATCCACCCTTC+AGG | 0.379336 | 3_4:-61765766 | Msa0512140:three_prime_UTR |
| TCTCTTCTTCCAAGTCCAAT+AGG | 0.385087 | 3_4:-61766200 | Msa0512140:CDS |
| CTCCCATGCCGCCTAGAATT+CGG | 0.401473 | 3_4:+61770101 | None:intergenic |
| AAGGATATAGGAGAGGTAAT+TGG | 0.404417 | 3_4:-61765924 | Msa0512140:CDS |
| CATGCTCCCCAACTACTATC+TGG | 0.404551 | 3_4:+61769056 | None:intergenic |
| GAAGCATGAATCTGTGGAAC+TGG | 0.408067 | 3_4:-61769258 | Msa0512140:CDS |
| TTGACCCTCCAGATAGTAGT+TGG | 0.416306 | 3_4:-61769064 | Msa0512140:CDS |
| TGATAGAATATGTGCATTCT+CGG | 0.420405 | 3_4:+61766831 | None:intergenic |
| AGGACTCCAACTGGTCCTAT+TGG | 0.422284 | 3_4:+61766185 | None:intergenic |
| TGATTCGTGGTCTCTTGCCT+TGG | 0.422760 | 3_4:+61770057 | None:intergenic |
| AGTAATTCGGCATCAAGGTT+TGG | 0.423052 | 3_4:-61765961 | Msa0512140:CDS |
| CCACACCTACTTTGTGCTAT+AGG | 0.427699 | 3_4:-61766877 | Msa0512140:CDS |
| CTCTGCTCTTCGATTTCTTG+GGG | 0.432190 | 3_4:+61766322 | None:intergenic |
| TCTGGAGGGTCAAAATATCT+TGG | 0.434365 | 3_4:+61769074 | None:intergenic |
| GTTACGAACATAAGTTCAAC+AGG | 0.437267 | 3_4:+61765694 | None:intergenic |
| ATCATAGATATTCGTCATCA+AGG | 0.437302 | 3_4:-61766017 | Msa0512140:CDS |
| AGATATTCGTCATCAAGGTT+TGG | 0.438735 | 3_4:-61766012 | Msa0512140:CDS |
| TAAAGCTTCTTTCTTCTGTA+GGG | 0.446719 | 3_4:+61766418 | None:intergenic |
| GGAAAGCATCGGCTGACCCT+TGG | 0.447016 | 3_4:+61766040 | None:intergenic |
| TGACCCTCCAGATAGTAGTT+GGG | 0.451078 | 3_4:-61769063 | Msa0512140:CDS |
| TAAAATTTCTAAGGGGTGGA+TGG | 0.452337 | 3_4:-61766088 | Msa0512140:CDS |
| TGTGGTCAGATGGGTCATAC+TGG | 0.453010 | 3_4:-61768452 | Msa0512140:CDS |
| TAAGAGTAGGGGCGGCTGGA+CGG | 0.456362 | 3_4:-61766379 | Msa0512140:CDS |
| GTTTCGATTCTCGTGTTCGA+AGG | 0.457467 | 3_4:+61769927 | None:intergenic |
| GAAAGCATCGGCTGACCCTT+GGG | 0.458498 | 3_4:+61766041 | None:intergenic |
| GAGTAGGGGCGGCTGGACGG+GGG | 0.460940 | 3_4:-61766376 | Msa0512140:CDS |
| GTATAGCTTCTTTCTTCTGT+AGG | 0.461609 | 3_4:+61766486 | None:intergenic |
| TCTCCTATATCCATCATCAT+TGG | 0.461769 | 3_4:+61765984 | None:intergenic |
| ACTCCAATGATGATGGATAT+AGG | 0.461906 | 3_4:-61765987 | Msa0512140:CDS |
| TTGGAAGAAGAGAATTCTCC+AGG | 0.464073 | 3_4:+61766210 | None:intergenic |
| AATCTAAGAGTAGGGGCGGC+TGG | 0.465807 | 3_4:-61766383 | Msa0512140:CDS |
| TGGATATAGGAGAAGTAATT+CGG | 0.466217 | 3_4:-61765974 | Msa0512140:CDS |
| GGCTGACCCTTGGGAATATG+AGG | 0.468220 | 3_4:+61766050 | None:intergenic |
| AATATGTATGCGAGTGGTAG+TGG | 0.469200 | 3_4:-61766135 | Msa0512140:CDS |
| TTGTTACAAATGTGGTCAGA+TGG | 0.471165 | 3_4:-61768462 | Msa0512140:CDS |
| AGTTGCTACGTCTGCAAGAA+AGG | 0.472885 | 3_4:-61768842 | Msa0512140:CDS |
| TTAAAGTCTCTATCTTCTGC+AGG | 0.473283 | 3_4:+61766279 | None:intergenic |
| TCCACCCTTCAGGAAGTAAT+GGG | 0.479144 | 3_4:-61765756 | Msa0512140:three_prime_UTR |
| AATTGATGCAGGCATGTTCA+AGG | 0.479193 | 3_4:-61767048 | Msa0512140:intron |
| GTGCTATAGGTGTGGTGAAG+GGG | 0.485852 | 3_4:-61766864 | Msa0512140:CDS |
| TGGAGTTCTAAAATTTCTAA+GGG | 0.486220 | 3_4:-61766096 | Msa0512140:CDS |
| TTTCGATTCTCGTGTTCGAA+GGG | 0.487535 | 3_4:+61769928 | None:intergenic |
| TGTCCCCGCAGGACTCCAAC+TGG | 0.488598 | 3_4:+61766176 | None:intergenic |
| TGGTCTGCACCTCTCGATAT+GGG | 0.489901 | 3_4:-61766603 | Msa0512140:CDS |
| CCCAAAGAAATCTAAGAGTA+GGG | 0.492910 | 3_4:-61766391 | Msa0512140:CDS |
| TGCTATAATTGTGGCGAGGA+AGG | 0.493123 | 3_4:-61769035 | Msa0512140:CDS |
| TGCTATGTATGTGGTGAGTT+GGG | 0.493262 | 3_4:-61768969 | Msa0512140:CDS |
| TCTTGCAGACGTAGCAACTC+TGG | 0.493736 | 3_4:+61768846 | None:intergenic |
| AATCGAAGAGCAGAGGTGGC+TGG | 0.497514 | 3_4:-61766314 | Msa0512140:CDS |
| TTGTGCTATAGGTGTGGTGA+AGG | 0.499258 | 3_4:-61766866 | Msa0512140:CDS |
| TTGTAACAAGAAATTTCTCC+CGG | 0.503043 | 3_4:+61768476 | None:intergenic |
| GTTCTAAAATTTCTAAGGGG+TGG | 0.506936 | 3_4:-61766092 | Msa0512140:CDS |
| AGGACCAGTTGGAGTCCTGC+GGG | 0.507329 | 3_4:-61766180 | Msa0512140:CDS |
| CCTCTGCTCTTGAATTTCAT+GGG | 0.511578 | 3_4:+61766252 | None:intergenic |
| AAAACAACCTTGAGATCATC+CGG | 0.511648 | 3_4:+61768695 | None:intergenic |
| TTGATGACGAATATCTATGA+TGG | 0.512902 | 3_4:+61766019 | None:intergenic |
| AATTCAAGAGCAGAGGTGGC+TGG | 0.513526 | 3_4:-61766245 | Msa0512140:CDS |
| ATCCACCCTTCAGGAAGTAA+TGG | 0.515530 | 3_4:-61765757 | Msa0512140:three_prime_UTR |
| CCAACTGGTCCTATTGGACT+TGG | 0.517424 | 3_4:+61766191 | None:intergenic |
| AGGCGGCATGGGAGGGAGGA+AGG | 0.519317 | 3_4:-61770092 | Msa0512140:exon |
| GGCTGGATGGCTGATCACCC+TGG | 0.522893 | 3_4:-61766228 | Msa0512140:CDS |
| ATATTAGTGTTTCTAGCAGA+TGG | 0.528319 | 3_4:+61766153 | None:intergenic |
| AATCAAAGAGGAGAGGTGGC+TGG | 0.529181 | 3_4:-61766521 | Msa0512140:CDS |
| GATAGAATATGTGCATTCTC+GGG | 0.530153 | 3_4:+61766832 | None:intergenic |
| AAAATTTCTAAGGGGTGGAT+GGG | 0.530654 | 3_4:-61766087 | Msa0512140:CDS |
| GACCGAATTCTAGGCGGCAT+GGG | 0.531749 | 3_4:-61770103 | Msa0512140:exon |
| CGACCGAATTCTAGGCGGCA+TGG | 0.532389 | 3_4:-61770104 | Msa0512140:exon |
| ATGCAGGAATGATTATTCAC+CGG | 0.532954 | 3_4:-61768714 | Msa0512140:CDS |
| GACCCTCCAGATAGTAGTTG+GGG | 0.533076 | 3_4:-61769062 | Msa0512140:CDS |
| CAGCATTGACACAACATAAG+TGG | 0.533186 | 3_4:+61768510 | None:intergenic |
| GAAATTTCTTGTTACAAATG+TGG | 0.535838 | 3_4:-61768470 | Msa0512140:CDS |
| TTTGGCAACTCCAATGATGA+TGG | 0.536537 | 3_4:-61765994 | Msa0512140:CDS |
| ATGCTATGTATGTGGTGAGT+TGG | 0.536721 | 3_4:-61768970 | Msa0512140:CDS |
| GATATAGGAGAGGTAATTGG+TGG | 0.536780 | 3_4:-61765921 | Msa0512140:CDS |
| ATGAAATTCAAGAGCAGAGG+TGG | 0.536820 | 3_4:-61766249 | Msa0512140:CDS |
| GCTTGAAGTGTGGAAATTCT+GGG | 0.538694 | 3_4:-61768751 | Msa0512140:CDS |
| GAATTCTAGGCGGCATGGGA+GGG | 0.540611 | 3_4:-61770099 | Msa0512140:exon |
| TTCTAGGCGGCATGGGAGGG+AGG | 0.541783 | 3_4:-61770096 | Msa0512140:exon |
| AAGCCTCTTTCGTCTGTATG+AGG | 0.542030 | 3_4:+61766558 | None:intergenic |
| GGAGAAGTAATTCGGCATCA+AGG | 0.542087 | 3_4:-61765966 | Msa0512140:CDS |
| AGATTTCTGAGGAGGTAAAA+CGG | 0.542148 | 3_4:+61769889 | None:intergenic |
| CGAGATTGTCGATTGATTCG+TGG | 0.542996 | 3_4:+61770044 | None:intergenic |
| GGTAGTGGAAGTCGAACTCC+AGG | 0.543268 | 3_4:-61766120 | Msa0512140:CDS |
| CTAGCAGATGGTGTCCCCGC+AGG | 0.545192 | 3_4:+61766165 | None:intergenic |
| TCAGATGGGTCATACTGGTT+CGG | 0.545818 | 3_4:-61768447 | Msa0512140:intron |
| CGAATTCTAGGCGGCATGGG+AGG | 0.545884 | 3_4:-61770100 | Msa0512140:exon |
| AGAATGCACATATTCTATCA+AGG | 0.551056 | 3_4:-61766828 | Msa0512140:intron |
| AAGTTTCAAAGTGAGACTAC+TGG | 0.551532 | 3_4:-61766905 | Msa0512140:CDS |
| TGCTATAGGTGTGGTGAAGG+AGG | 0.553090 | 3_4:-61766986 | Msa0512140:CDS |
| GTACGCCCATTACTTCCTGA+AGG | 0.553311 | 3_4:+61765751 | None:intergenic |
| TGTTACAAATGTGGTCAGAT+GGG | 0.553753 | 3_4:-61768461 | Msa0512140:CDS |
| CTGTAAAGAAAATGAATACA+CGG | 0.554838 | 3_4:-61766631 | Msa0512140:CDS |
| GAGGAGAGGTGGCTGGATGA+CGG | 0.558594 | 3_4:-61766514 | Msa0512140:CDS |
| TGCTATAGGTGTGGTGAAGG+GGG | 0.563583 | 3_4:-61766863 | Msa0512140:CDS |
| TATCAGGGTACAATTGATGC+AGG | 0.564930 | 3_4:-61766936 | Msa0512140:CDS |
| TCAGAAATCTGAGCTTCTGA+TGG | 0.565548 | 3_4:-61769876 | Msa0512140:CDS |
| GAAGCGAGTGTGGATCAGAT+AGG | 0.566927 | 3_4:-61769236 | Msa0512140:CDS |
| CAAGAGCAGAGGTGGCTGGA+TGG | 0.567200 | 3_4:-61766241 | Msa0512140:CDS |
| CAATGCTGCTGATGCAACAC+CGG | 0.572275 | 3_4:-61768495 | Msa0512140:CDS |
| CCCATGAAATTCAAGAGCAG+AGG | 0.572284 | 3_4:-61766252 | Msa0512140:CDS |
| TTTGGCAACTCTAGTGGTGA+AGG | 0.574137 | 3_4:-61765943 | Msa0512140:CDS |
| AAAATGAATACACGGGACAT+TGG | 0.575346 | 3_4:-61766623 | Msa0512140:CDS |
| GAAGGAGAAGTCGAAAGCCA+AGG | 0.576316 | 3_4:-61770074 | Msa0512140:CDS |
| CCCCAAAGAAATCTAAGAGT+AGG | 0.578045 | 3_4:-61766392 | Msa0512140:CDS |
| CGGCCTCATACAGACGAAAG+AGG | 0.581226 | 3_4:-61766561 | Msa0512140:CDS |
| CCAAGTCCAATAGGACCAGT+TGG | 0.582670 | 3_4:-61766191 | Msa0512140:CDS |
| TTTAATGGCTGCAGAGCAAG+AGG | 0.583974 | 3_4:-61769306 | Msa0512140:CDS |
| TGTGGAACTGGAAGCGAGTG+TGG | 0.585170 | 3_4:-61769246 | Msa0512140:CDS |
| CAGAGAAGCACATGACTGCA+CGG | 0.586586 | 3_4:-61768796 | Msa0512140:CDS |
| AAGTAGAGGTGGCTGGACAA+TGG | 0.589351 | 3_4:-61766445 | Msa0512140:CDS |
| TTATTCACCGGATGATCTCA+AGG | 0.590352 | 3_4:-61768702 | Msa0512140:intron |
| TCAAGGTTTGGCAACTCTAG+TGG | 0.591012 | 3_4:-61765949 | Msa0512140:CDS |
| TGTGCTATAGGTGTGGTGAA+GGG | 0.593983 | 3_4:-61766865 | Msa0512140:CDS |
| CAGGCATGTTCAAGGTTGCA+AGG | 0.596010 | 3_4:-61767040 | Msa0512140:CDS |
| GAGCAGAGGTGGCTGGACAA+CGG | 0.596343 | 3_4:-61766307 | Msa0512140:CDS |
| AAGAAATCGAAGAGCAGAGG+TGG | 0.600256 | 3_4:-61766318 | Msa0512140:CDS |
| GCCCATTACTTCCTGAAGGG+TGG | 0.600748 | 3_4:+61765755 | None:intergenic |
| CTGCCGCTGAATACGAGTGA+AGG | 0.603577 | 3_4:+61770007 | None:intergenic |
| TAGGACCAGTTGGAGTCCTG+CGG | 0.605008 | 3_4:-61766181 | Msa0512140:CDS |
| TACGCCCATTACTTCCTGAA+GGG | 0.606309 | 3_4:+61765752 | None:intergenic |
| CCACACCTATAGCACAAAGT+AGG | 0.606681 | 3_4:+61766872 | None:intergenic |
| CCACACCTATAGCACAAAGT+AGG | 0.606681 | 3_4:+61766995 | None:intergenic |
| AGATCTGAGTCTCAAGATCG+TGG | 0.607666 | 3_4:-61769957 | Msa0512140:CDS |
| AACTCACCACATACATAGCA+TGG | 0.608122 | 3_4:+61768972 | None:intergenic |
| AGGTTGCAAGGTGAGACTAC+TGG | 0.608283 | 3_4:-61767028 | Msa0512140:CDS |
| CTCCCCAACTACTATCTGGA+GGG | 0.609658 | 3_4:+61769060 | None:intergenic |
| AGAGAAGCACATGACTGCAC+GGG | 0.614866 | 3_4:-61768795 | Msa0512140:CDS |
| TGGGGAGCATGCTATAATTG+TGG | 0.615270 | 3_4:-61769044 | Msa0512140:CDS |
| TACAGAGAAGCATGAATCTG+TGG | 0.616167 | 3_4:-61769264 | Msa0512140:CDS |
| TCTGCTCTTCGATTTCTTGG+GGG | 0.616452 | 3_4:+61766323 | None:intergenic |
| AAGAAATCAAAGAGGAGAGG+TGG | 0.616538 | 3_4:-61766525 | Msa0512140:CDS |
| GTGGAAGTCGAACTCCAGGT+TGG | 0.617850 | 3_4:-61766116 | Msa0512140:CDS |
| AGAATGCACAAGTTCTATCA+GGG | 0.622439 | 3_4:-61766951 | Msa0512140:CDS |
| GCTGAATACGAGTGAAGGAG+TGG | 0.622721 | 3_4:+61770012 | None:intergenic |
| AATGCTGCTGATGCAACACC+GGG | 0.624524 | 3_4:-61768494 | Msa0512140:CDS |
| CCTGAAGCCTCATATTCCCA+AGG | 0.625347 | 3_4:-61766057 | Msa0512140:CDS |
| AGAAGCTCAGATTTCTGAGG+AGG | 0.625578 | 3_4:+61769881 | None:intergenic |
| AATGGCTGCAGAGCAAGAGG+TGG | 0.629284 | 3_4:-61769303 | Msa0512140:CDS |
| GCTCCCCAACTACTATCTGG+AGG | 0.629473 | 3_4:+61769059 | None:intergenic |
| TTGTGCTATAGGTGTGGTGA+AGG | 0.629866 | 3_4:-61766989 | Msa0512140:CDS |
| CCCAAGAAATCGAAGAGCAG+AGG | 0.632661 | 3_4:-61766321 | Msa0512140:CDS |
| ATATCTATGATGGAAAGCAT+CGG | 0.635238 | 3_4:+61766029 | None:intergenic |
| GGATCGAACTGAAAGACTTG+TGG | 0.637464 | 3_4:+61765776 | None:intergenic |
| AAGAAATCTAAGAGTAGGGG+CGG | 0.638762 | 3_4:-61766387 | Msa0512140:CDS |
| ACTCCTTCACTCGTATTCAG+CGG | 0.641368 | 3_4:-61770010 | Msa0512140:CDS |
| CCTATAGCACAAAGTAGGTG+TGG | 0.644410 | 3_4:+61767000 | None:intergenic |
| AAGAAACCATGCTATGTATG+TGG | 0.646078 | 3_4:-61768978 | Msa0512140:CDS |
| AACACTAATATGTATGCGAG+TGG | 0.648222 | 3_4:-61766141 | Msa0512140:CDS |
| CCTACTCTTAGATTTCTTTG+GGG | 0.649610 | 3_4:+61766392 | None:intergenic |
| TGTAAAGAAAATGAATACAC+GGG | 0.650189 | 3_4:-61766630 | Msa0512140:CDS |
| GCTATAGGTGTGGTGAAGGA+GGG | 0.650856 | 3_4:-61766985 | Msa0512140:CDS |
| GGAGTTCTAAAATTTCTAAG+GGG | 0.652496 | 3_4:-61766095 | Msa0512140:CDS |
| CCAAAGAAATCTAAGAGTAG+GGG | 0.655219 | 3_4:-61766390 | Msa0512140:CDS |
| CATGCCGCCTAGAATTCGGT+CGG | 0.658486 | 3_4:+61770105 | None:intergenic |
| ACGGGCTTCTAAAAGTCTGA+CGG | 0.658559 | 3_4:-61768777 | Msa0512140:CDS |
| CCTAAGAAATCAAAGAGGAG+AGG | 0.660128 | 3_4:-61766528 | Msa0512140:CDS |
| CCTATAGCACAAAGTAGGTG+TGG | 0.661415 | 3_4:+61766877 | None:intergenic |
| TGGAAGAAGAGAATTCTCCA+GGG | 0.661485 | 3_4:+61766211 | None:intergenic |
| CTGAAGCCTCATATTCCCAA+GGG | 0.662550 | 3_4:-61766056 | Msa0512140:CDS |
| TGCTACGTCTGCAAGAAAGG+TGG | 0.663544 | 3_4:-61768839 | Msa0512140:CDS |
| ATCAGAAGCTCAGATTTCTG+AGG | 0.664294 | 3_4:+61769878 | None:intergenic |
| TAAACTGTACAGCAGCGAAG+CGG | 0.671137 | 3_4:-61769001 | Msa0512140:CDS |
| CAACACCTAAGAAATCAAAG+AGG | 0.673886 | 3_4:-61766533 | Msa0512140:CDS |
| GGATCAGATAGGTGACAACA+TGG | 0.674837 | 3_4:-61769225 | Msa0512140:CDS |
| TCAAAGTGAGACTACTGGTG+CGG | 0.678171 | 3_4:-61766900 | Msa0512140:CDS |
| CCTACTTTGTGCTATAGGTG+TGG | 0.685206 | 3_4:-61766872 | Msa0512140:CDS |
| CCTACTTTGTGCTATAGGTG+TGG | 0.685206 | 3_4:-61766995 | Msa0512140:CDS |
| ATGAAGGGAAGAAATAAACA+TGG | 0.685370 | 3_4:+61765587 | None:intergenic |
| AGTGGTGAAGGATATAGGAG+AGG | 0.686632 | 3_4:-61765931 | Msa0512140:CDS |
| CTGACGGTATGCTTGAAGTG+TGG | 0.691033 | 3_4:-61768761 | Msa0512140:CDS |
| CGAGTGAAGGAGTGGAAGCG+CGG | 0.692324 | 3_4:+61770020 | None:intergenic |
| AGCATGCTATAATTGTGGCG+AGG | 0.714278 | 3_4:-61769039 | Msa0512140:CDS |
| GGACCAGTTGGAGTCCTGCG+GGG | 0.722458 | 3_4:-61766179 | Msa0512140:CDS |
| AACTCCGACCGAATTCTAGG+CGG | 0.740872 | 3_4:-61770109 | Msa0512140:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTTTAGTTTTATTTT+TGG | + | chr3_4:61765602-61765621 | None:intergenic | 10.0% |
| !!! | TATTTTAAGATACAAAAATA+TGG | + | chr3_4:61768409-61768428 | None:intergenic | 10.0% |
| !! | AATAATAAATAACAAAGAAA+AGG | + | chr3_4:61769047-61769066 | None:intergenic | 10.0% |
| !! | TAATCTGATTAATATCAAAA+GGG | + | chr3_4:61766085-61766104 | None:intergenic | 15.0% |
| !! | ATAATCTGATTAATATCAAA+AGG | + | chr3_4:61766086-61766105 | None:intergenic | 15.0% |
| !! | AATCAGATTATGATTTAATT+TGG | - | chr3_4:61766095-61766114 | Msa0512140:CDS | 15.0% |
| !!! | ATATATTACAAATTTGCTAA+AGG | - | chr3_4:61767143-61767162 | Msa0512140:intron | 15.0% |
| !!! | TTTCTTTCTTTTGTTTAATT+AGG | - | chr3_4:61767239-61767258 | Msa0512140:intron | 15.0% |
| !! | AAACTTAACATAATATATTC+AGG | + | chr3_4:61768485-61768504 | None:intergenic | 15.0% |
| !! | TATTAAAATAGTGAATTCAA+TGG | - | chr3_4:61768532-61768551 | Msa0512140:CDS | 15.0% |
| !! | ATTAAAATAGTGAATTCAAT+GGG | - | chr3_4:61768533-61768552 | Msa0512140:CDS | 15.0% |
| !! | ATAAAAATTGCATTGTAACA+TGG | - | chr3_4:61766143-61766162 | Msa0512140:CDS | 20.0% |
| !!! | TTGATAGTAATTTTATTTCC+TGG | - | chr3_4:61767862-61767881 | Msa0512140:intron | 20.0% |
| !! | ATGATAGGATAATTAAGAAT+TGG | - | chr3_4:61768167-61768186 | Msa0512140:intron | 20.0% |
| !! | ACATTACTACTAAATAACTT+TGG | + | chr3_4:61768267-61768286 | None:intergenic | 20.0% |
| !! | TTACTTCCAAATAAAACTAT+TGG | - | chr3_4:61768712-61768731 | Msa0512140:CDS | 20.0% |
| !!! | TATTTGCCAATAGTTTTATT+TGG | + | chr3_4:61768721-61768740 | None:intergenic | 20.0% |
| !! | ATTTAAAAAAACTTGCAAGT+AGG | + | chr3_4:61769962-61769981 | None:intergenic | 20.0% |
| ! | AAAAAAAAACTGAAGATCTG+AGG | - | chr3_4:61765634-61765653 | Msa0512140:three_prime_UTR | 25.0% |
| !!! | AGGGTTTTCATTTTTCAATT+TGG | - | chr3_4:61765671-61765690 | Msa0512140:three_prime_UTR | 25.0% |
| !!! | ATTATGATTTAATTTGGAGC+TGG | - | chr3_4:61766101-61766120 | Msa0512140:CDS | 25.0% |
| !!! | TTGATTTGTAGAGACATTTT+AGG | - | chr3_4:61766257-61766276 | Msa0512140:CDS | 25.0% |
| !!! | TTTTAGGAACTAACCTAAAA+AGG | - | chr3_4:61766273-61766292 | Msa0512140:CDS | 25.0% |
| !! | AAAATTCCTCGAACTTTTAT+AGG | + | chr3_4:61766367-61766386 | None:intergenic | 25.0% |
| !!! | AATGTTTTTGCTTTCTATGT+AGG | - | chr3_4:61766473-61766492 | Msa0512140:CDS | 25.0% |
| ! | TGTTATATCTGTAAGCTATT+TGG | - | chr3_4:61767270-61767289 | Msa0512140:intron | 25.0% |
| ! | GAAATTTCTTGTTACAAATG+TGG | - | chr3_4:61767333-61767352 | Msa0512140:intron | 25.0% |
| ! | TTAATAATTATGCACCTTTC+TGG | - | chr3_4:61767392-61767411 | Msa0512140:intron | 25.0% |
| ! | ATGTGAGTATAAATTTCAGA+GGG | + | chr3_4:61767838-61767857 | None:intergenic | 25.0% |
| ! | AATGTGAGTATAAATTTCAG+AGG | + | chr3_4:61767839-61767858 | None:intergenic | 25.0% |
| !!! | GTAATTTTATTTCCTGGTAT+TGG | - | chr3_4:61767868-61767887 | Msa0512140:intron | 25.0% |
| ! | GGATATTCCTTAAAAATGAA+TGG | - | chr3_4:61768188-61768207 | Msa0512140:intron | 25.0% |
| ! | ACATATTATAGCTGAGAAAA+TGG | + | chr3_4:61768679-61768698 | None:intergenic | 25.0% |
| ! | TACAGTCTAAAAATTTAGTC+AGG | - | chr3_4:61768998-61769017 | Msa0512140:CDS | 25.0% |
| ! | CTGTAAAGAAAATGAATACA+CGG | - | chr3_4:61769172-61769191 | Msa0512140:intron | 25.0% |
| ! | TGTAAAGAAAATGAATACAC+GGG | - | chr3_4:61769173-61769192 | Msa0512140:intron | 25.0% |
| !!! | TTGGAGTTCTAAAATTTCTA+AGG | - | chr3_4:61769706-61769725 | Msa0512140:intron | 25.0% |
| !!! | TGGAGTTCTAAAATTTCTAA+GGG | - | chr3_4:61769707-61769726 | Msa0512140:intron | 25.0% |
| !! | TCATTTTACAAGTTTACAGA+TGG | + | chr3_4:61769937-61769956 | None:intergenic | 25.0% |
| TTAATCAAATCATGCCAAGT+AGG | - | chr3_4:61766232-61766251 | Msa0512140:CDS | 30.0% | |
| TCTACAAATCAATTCCTACT+TGG | + | chr3_4:61766249-61766268 | None:intergenic | 30.0% | |
| TAGCATCAGAGTGATTTAAT+TGG | - | chr3_4:61766296-61766315 | Msa0512140:CDS | 30.0% | |
| TCAAATCCTATAAAAGTTCG+AGG | - | chr3_4:61766358-61766377 | Msa0512140:CDS | 30.0% | |
| TTAATAAAACAACACCCACT+TGG | - | chr3_4:61766427-61766446 | Msa0512140:CDS | 30.0% | |
| !! | GCTTTCTATGTAGGTTTTAA+TGG | - | chr3_4:61766482-61766501 | Msa0512140:CDS | 30.0% |
| TTTCAAAATAGTGTACCACA+AGG | - | chr3_4:61766657-61766676 | Msa0512140:CDS | 30.0% | |
| TTAAACCTTCATAAGCCAAT+AGG | + | chr3_4:61766898-61766917 | None:intergenic | 30.0% | |
| ! | ATTGGCTTATGAAGGTTTAA+AGG | - | chr3_4:61766898-61766917 | Msa0512140:CDS | 30.0% |
| !! | ACAAATTTGCTAAAGGTTCT+TGG | - | chr3_4:61767150-61767169 | Msa0512140:intron | 30.0% |
| TTGTAACAAGAAATTTCTCC+CGG | + | chr3_4:61767330-61767349 | None:intergenic | 30.0% | |
| AATGATTGGAAGAGATTATC+AGG | + | chr3_4:61767616-61767635 | None:intergenic | 30.0% | |
| TGACATTTAAGGGTAATGAT+TGG | + | chr3_4:61767630-61767649 | None:intergenic | 30.0% | |
| ! | TGGTAATGAATAGCAGAAAA+AGG | - | chr3_4:61767756-61767775 | Msa0512140:intron | 30.0% |
| GGTAATGAATAGCAGAAAAA+GGG | - | chr3_4:61767757-61767776 | Msa0512140:intron | 30.0% | |
| GGGAATCAAGTAAGTTTAAA+AGG | + | chr3_4:61767818-61767837 | None:intergenic | 30.0% | |
| TGCTACAATGAAAGTTAGAT+TGG | - | chr3_4:61767944-61767963 | Msa0512140:intron | 30.0% | |
| CATCTATGGTATAGAAAATG+TGG | - | chr3_4:61767967-61767986 | Msa0512140:intron | 30.0% | |
| TATGGTATAGAAAATGTGGT+AGG | - | chr3_4:61767971-61767990 | Msa0512140:intron | 30.0% | |
| ATGGTATAGAAAATGTGGTA+GGG | - | chr3_4:61767972-61767991 | Msa0512140:intron | 30.0% | |
| ! | GAAGCATTAGTAAGAATAGT+AGG | - | chr3_4:61768037-61768056 | Msa0512140:intron | 30.0% |
| CTTTAAGCTTGATTCATGAT+AGG | - | chr3_4:61768152-61768171 | Msa0512140:intron | 30.0% | |
| TGATAGAATATGTGCATTCT+CGG | + | chr3_4:61768975-61768994 | None:intergenic | 30.0% | |
| AGAATGCACATATTCTATCA+AGG | - | chr3_4:61768975-61768994 | Msa0512140:CDS | 30.0% | |
| ! | CGTGTATTCATTTTCTTTAC+AGG | + | chr3_4:61769174-61769193 | None:intergenic | 30.0% |
| !!! | CCTCTACTTTTTGATTTCTT+AGG | + | chr3_4:61769347-61769366 | None:intergenic | 30.0% |
| CCTAAGAAATCAAAAAGTAG+AGG | - | chr3_4:61769344-61769363 | Msa0512140:intron | 30.0% | |
| AAGAAATCAAAAAGTAGAGG+TGG | - | chr3_4:61769347-61769366 | Msa0512140:intron | 30.0% | |
| TAAAGCTTCTTTCTTCTGTA+GGG | + | chr3_4:61769388-61769407 | None:intergenic | 30.0% | |
| !! | ATATTAGTGTTTCTAGCAGA+TGG | + | chr3_4:61769653-61769672 | None:intergenic | 30.0% |
| !! | GGAGTTCTAAAATTTCTAAG+GGG | - | chr3_4:61769708-61769727 | Msa0512140:intron | 30.0% |
| ! | ATATCTATGATGGAAAGCAT+CGG | + | chr3_4:61769777-61769796 | None:intergenic | 30.0% |
| !! | TTGATGACGAATATCTATGA+TGG | + | chr3_4:61769787-61769806 | None:intergenic | 30.0% |
| ATCATAGATATTCGTCATCA+AGG | - | chr3_4:61769786-61769805 | Msa0512140:intron | 30.0% | |
| TGGATATAGGAGAAGTAATT+CGG | - | chr3_4:61769829-61769848 | Msa0512140:intron | 30.0% | |
| !!! | TACCTTTTAAGATATGTAGC+AGG | - | chr3_4:61770149-61770168 | Msa0512140:five_prime_UTR | 30.0% |
| !!! | ACCTTTTAAGATATGTAGCA+GGG | - | chr3_4:61770150-61770169 | Msa0512140:five_prime_UTR | 30.0% |
| !! | CATGGTAGAAGTATTGTAAA+TGG | + | chr3_4:61770201-61770220 | None:intergenic | 30.0% |
| ! | AGATTTCTGAGGAGGTAAAA+CGG | + | chr3_4:61765917-61765936 | None:intergenic | 35.0% |
| CCAACACATACACTTTGATT+TGG | + | chr3_4:61765979-61765998 | None:intergenic | 35.0% | |
| CCAAATCAAAGTGTATGTGT+TGG | - | chr3_4:61765976-61765995 | Msa0512140:CDS | 35.0% | |
| ! | CCATGTTTCTTTTCTATCAG+CGG | - | chr3_4:61766703-61766722 | Msa0512140:intron | 35.0% |
| ! | CATGTTTCTTTTCTATCAGC+GGG | - | chr3_4:61766704-61766723 | Msa0512140:intron | 35.0% |
| ! | ATGTTTCTTTTCTATCAGCG+GGG | - | chr3_4:61766705-61766724 | Msa0512140:intron | 35.0% |
| AAGAAACCATGCTATGTATG+TGG | - | chr3_4:61766825-61766844 | Msa0512140:intron | 35.0% | |
| TGCTGCAAAACAATGTTCTA+AGG | - | chr3_4:61766860-61766879 | Msa0512140:CDS | 35.0% | |
| ! | ATCTGCTTGATGGTTATGTA+GGG | - | chr3_4:61766934-61766953 | Msa0512140:CDS | 35.0% |
| ATGCAGGAATGATTATTCAC+CGG | - | chr3_4:61767089-61767108 | Msa0512140:intron | 35.0% | |
| AAAACAACCTTGAGATCATC+CGG | + | chr3_4:61767111-61767130 | None:intergenic | 35.0% | |
| TTGAGTTTGCATTGGAATAG+TGG | - | chr3_4:61767173-61767192 | Msa0512140:intron | 35.0% | |
| TTGTTACAAATGTGGTCAGA+TGG | - | chr3_4:61767341-61767360 | Msa0512140:intron | 35.0% | |
| TGTTACAAATGTGGTCAGAT+GGG | - | chr3_4:61767342-61767361 | Msa0512140:intron | 35.0% | |
| ACATTGTAAAGTCTCTAGTG+TGG | + | chr3_4:61767539-61767558 | None:intergenic | 35.0% | |
| !! | TTGACAGCACTGACATTTAA+GGG | + | chr3_4:61767640-61767659 | None:intergenic | 35.0% |
| !! | ATTGACAGCACTGACATTTA+AGG | + | chr3_4:61767641-61767660 | None:intergenic | 35.0% |
| ! | TTGCGGATTGCAAAAAATAG+CGG | - | chr3_4:61767660-61767679 | Msa0512140:intron | 35.0% |
| GTCACAGTATTGTCAAATAG+CGG | + | chr3_4:61767731-61767750 | None:intergenic | 35.0% | |
| TGACAATACTGTGACATGTA+TGG | - | chr3_4:61767736-61767755 | Msa0512140:intron | 35.0% | |
| GAAAGTTAGATTGGCATCTA+TGG | - | chr3_4:61767953-61767972 | Msa0512140:intron | 35.0% | |
| TACCTGAACCAACAAAGATA+AGG | + | chr3_4:61767998-61768017 | None:intergenic | 35.0% | |
| AGTAAGAATAGTAGGCTAGA+TGG | - | chr3_4:61768045-61768064 | Msa0512140:intron | 35.0% | |
| GAGGGAAAACATTTGAAAAC+TGG | - | chr3_4:61768092-61768111 | Msa0512140:intron | 35.0% | |
| GGAAAACATTTGAAAACTGG+AGG | - | chr3_4:61768095-61768114 | Msa0512140:intron | 35.0% | |
| ATTTAACTCCAAGTTCTCAG+TGG | + | chr3_4:61768126-61768145 | None:intergenic | 35.0% | |
| !! | GCAGCATCCATTCATTTTTA+AGG | + | chr3_4:61768198-61768217 | None:intergenic | 35.0% |
| ATAGCCATTGGGACATTAAA+AGG | + | chr3_4:61768347-61768366 | None:intergenic | 35.0% | |
| AAGCTTTCAAAAATGGCCTT+GGG | + | chr3_4:61768646-61768665 | None:intergenic | 35.0% | |
| AAAGCTTTCAAAAATGGCCT+TGG | + | chr3_4:61768647-61768666 | None:intergenic | 35.0% | |
| !!! | AAGGCCATTTTTGAAAGCTT+TGG | - | chr3_4:61768646-61768665 | Msa0512140:intron | 35.0% |
| ATCTGAGTATCAATTGATGC+AGG | - | chr3_4:61768744-61768763 | Msa0512140:CDS | 35.0% | |
| AGAATGCACAAGTTCTATCA+GGG | - | chr3_4:61768852-61768871 | Msa0512140:intron | 35.0% | |
| AAGTTTCAAAGTGAGACTAC+TGG | - | chr3_4:61768898-61768917 | Msa0512140:intron | 35.0% | |
| GATAGAATATGTGCATTCTC+GGG | + | chr3_4:61768974-61768993 | None:intergenic | 35.0% | |
| AAAATGAATACACGGGACAT+TGG | - | chr3_4:61769180-61769199 | Msa0512140:intron | 35.0% | |
| GCAAAACGCACAAAAAGAAA+CGG | - | chr3_4:61769222-61769241 | Msa0512140:CDS | 35.0% | |
| CAACACCTAAGAAATCAAAG+AGG | - | chr3_4:61769270-61769289 | Msa0512140:CDS | 35.0% | |
| GTATAGCTTCTTTCTTCTGT+AGG | + | chr3_4:61769320-61769339 | None:intergenic | 35.0% | |
| GTAAAGCTTCTTTCTTCTGT+AGG | + | chr3_4:61769389-61769408 | None:intergenic | 35.0% | |
| CCTACTCTTAGATTTCTTTG+GGG | + | chr3_4:61769414-61769433 | None:intergenic | 35.0% | |
| CCCTACTCTTAGATTTCTTT+GGG | + | chr3_4:61769415-61769434 | None:intergenic | 35.0% | |
| CCCAAAGAAATCTAAGAGTA+GGG | - | chr3_4:61769412-61769431 | Msa0512140:intron | 35.0% | |
| CCAAAGAAATCTAAGAGTAG+GGG | - | chr3_4:61769413-61769432 | Msa0512140:intron | 35.0% | |
| ! | GAGCATTTTACTGAAGAAAG+AGG | - | chr3_4:61769449-61769468 | Msa0512140:intron | 35.0% |
| TTAAAGTCTCTATCTTCTGC+AGG | + | chr3_4:61769527-61769546 | None:intergenic | 35.0% | |
| AACACTAATATGTATGCGAG+TGG | - | chr3_4:61769662-61769681 | Msa0512140:intron | 35.0% | |
| !!! | GAAATTTTAGAACTCCAACC+TGG | + | chr3_4:61769704-61769723 | None:intergenic | 35.0% |
| !! | GTTCTAAAATTTCTAAGGGG+TGG | - | chr3_4:61769711-61769730 | Msa0512140:intron | 35.0% |
| ! | TAAAATTTCTAAGGGGTGGA+TGG | - | chr3_4:61769715-61769734 | Msa0512140:intron | 35.0% |
| ! | AAAATTTCTAAGGGGTGGAT+GGG | - | chr3_4:61769716-61769735 | Msa0512140:intron | 35.0% |
| AGATATTCGTCATCAAGGTT+TGG | - | chr3_4:61769791-61769810 | Msa0512140:intron | 35.0% | |
| !! | ACTCCAATGATGATGGATAT+AGG | - | chr3_4:61769816-61769835 | Msa0512140:intron | 35.0% |
| TCTCCTATATCCATCATCAT+TGG | + | chr3_4:61769822-61769841 | None:intergenic | 35.0% | |
| AAGGATATAGGAGAGGTAAT+TGG | - | chr3_4:61769879-61769898 | Msa0512140:CDS | 35.0% | |
| GTTACGAACATAAGTTCAAC+AGG | + | chr3_4:61770112-61770131 | None:intergenic | 35.0% | |
| ACCCTGCTACATATCTTAAA+AGG | + | chr3_4:61770154-61770173 | None:intergenic | 35.0% | |
| TGAGGTGTGCTGTAAGATTA+GGG | - | chr3_4:61765652-61765671 | Msa0512140:three_prime_UTR | 40.0% | |
| CTTGAGACTCAGATCTTGAT+TGG | + | chr3_4:61765842-61765861 | None:intergenic | 40.0% | |
| TTTCGATTCTCGTGTTCGAA+GGG | + | chr3_4:61765878-61765897 | None:intergenic | 40.0% | |
| ATCAGAAGCTCAGATTTCTG+AGG | + | chr3_4:61765928-61765947 | None:intergenic | 40.0% | |
| TCAGAAATCTGAGCTTCTGA+TGG | - | chr3_4:61765927-61765946 | Msa0512140:CDS | 40.0% | |
| ! | CACTCTGATGCTACCTTTTT+AGG | + | chr3_4:61766289-61766308 | None:intergenic | 40.0% |
| ATCCAAGTGATTCTCCAAGT+GGG | + | chr3_4:61766444-61766463 | None:intergenic | 40.0% | |
| AATCCAAGTGATTCTCCAAG+TGG | + | chr3_4:61766445-61766464 | None:intergenic | 40.0% | |
| ! | TACAGAGAAGCATGAATCTG+TGG | - | chr3_4:61766539-61766558 | Msa0512140:CDS | 40.0% |
| TACCACAAGGAATGCTTAGT+TGG | - | chr3_4:61766670-61766689 | Msa0512140:CDS | 40.0% | |
| ACCACAAGGAATGCTTAGTT+GGG | - | chr3_4:61766671-61766690 | Msa0512140:CDS | 40.0% | |
| CCGCTGATAGAAAAGAAACA+TGG | + | chr3_4:61766706-61766725 | None:intergenic | 40.0% | |
| TCTGGAGGGTCAAAATATCT+TGG | + | chr3_4:61766732-61766751 | None:intergenic | 40.0% | |
| AACTCACCACATACATAGCA+TGG | + | chr3_4:61766834-61766853 | None:intergenic | 40.0% | |
| ATGCTATGTATGTGGTGAGT+TGG | - | chr3_4:61766833-61766852 | Msa0512140:CDS | 40.0% | |
| TGCTATGTATGTGGTGAGTT+GGG | - | chr3_4:61766834-61766853 | Msa0512140:CDS | 40.0% | |
| GTATACTGAGATCTGCTTGA+TGG | - | chr3_4:61766924-61766943 | Msa0512140:CDS | 40.0% | |
| ! | GATCTGCTTGATGGTTATGT+AGG | - | chr3_4:61766933-61766952 | Msa0512140:CDS | 40.0% |
| TGCTTGAAGTGTGGAAATTC+TGG | - | chr3_4:61767051-61767070 | Msa0512140:intron | 40.0% | |
| GCTTGAAGTGTGGAAATTCT+GGG | - | chr3_4:61767052-61767071 | Msa0512140:intron | 40.0% | |
| ! | GGCATGATATGTTTTCATGC+AGG | - | chr3_4:61767073-61767092 | Msa0512140:intron | 40.0% |
| TTATTCACCGGATGATCTCA+AGG | - | chr3_4:61767101-61767120 | Msa0512140:intron | 40.0% | |
| GTTCTTGGTTGAGTTTGCAT+TGG | - | chr3_4:61767165-61767184 | Msa0512140:intron | 40.0% | |
| !! | CAGCATTGACACAACATAAG+TGG | + | chr3_4:61767296-61767315 | None:intergenic | 40.0% |
| ! | TATGCACCTTTCTGGAGATT+CGG | - | chr3_4:61767400-61767419 | Msa0512140:intron | 40.0% |
| TTATCTCCGAATCTCCAGAA+AGG | + | chr3_4:61767409-61767428 | None:intergenic | 40.0% | |
| CTGTATACTTTCTCGTACGA+GGG | - | chr3_4:61767462-61767481 | Msa0512140:intron | 40.0% | |
| AATGTCAGTGCTGTCAATTG+CGG | - | chr3_4:61767643-61767662 | Msa0512140:intron | 40.0% | |
| ! | TGCGGATTGCAAAAAATAGC+GGG | - | chr3_4:61767661-61767680 | Msa0512140:intron | 40.0% |
| !! | ATAGAGGAGCAGTAGTTTTG+TGG | + | chr3_4:61767706-61767725 | None:intergenic | 40.0% |
| TTGTCAAATAGCGGCTATAG+AGG | + | chr3_4:61767722-61767741 | None:intergenic | 40.0% | |
| AAGAATAGTAGGCTAGATGG+AGG | - | chr3_4:61768048-61768067 | Msa0512140:intron | 40.0% | |
| ATGCTGCATCGTAACTAACA+AGG | - | chr3_4:61768211-61768230 | Msa0512140:intron | 40.0% | |
| TGCCTTAAGTGTAGTAGCTA+AGG | - | chr3_4:61768290-61768309 | Msa0512140:intron | 40.0% | |
| GACCTTAGCTACTACACTTA+AGG | + | chr3_4:61768295-61768314 | None:intergenic | 40.0% | |
| GGTGCTTACATGTGTGTATT+TGG | + | chr3_4:61768317-61768336 | None:intergenic | 40.0% | |
| TTGGGACATTAAAAGGTGGA+GGG | + | chr3_4:61768340-61768359 | None:intergenic | 40.0% | |
| ATTGGGACATTAAAAGGTGG+AGG | + | chr3_4:61768341-61768360 | None:intergenic | 40.0% | |
| ! | TCCACCTTTTAATGTCCCAA+TGG | - | chr3_4:61768340-61768359 | Msa0512140:intron | 40.0% |
| GCTTTAACCTTACAAGAGGA+TGG | + | chr3_4:61768383-61768402 | None:intergenic | 40.0% | |
| ! | GCAAGCTTTAACCTTACAAG+AGG | + | chr3_4:61768387-61768406 | None:intergenic | 40.0% |
| ATGGGAGCTAAAACTTTGAG+TGG | - | chr3_4:61768551-61768570 | Msa0512140:intron | 40.0% | |
| !! | CTTTTGAAAGCTTTGACCCA+AGG | - | chr3_4:61768627-61768646 | Msa0512140:intron | 40.0% |
| TGGGCCAAAGCTTTCAAAAA+TGG | + | chr3_4:61768653-61768672 | None:intergenic | 40.0% | |
| !! | TTTTTGAAAGCTTTGGCCCA+AGG | - | chr3_4:61768653-61768672 | Msa0512140:intron | 40.0% |
| ATAGCTGAGAAAATGGCCTT+GGG | + | chr3_4:61768672-61768691 | None:intergenic | 40.0% | |
| TATAGCTGAGAAAATGGCCT+TGG | + | chr3_4:61768673-61768692 | None:intergenic | 40.0% | |
| AATTGATGCAGGCATGTTCA+AGG | - | chr3_4:61768755-61768774 | Msa0512140:CDS | 40.0% | |
| GAGAATGCACAAGTTCTATC+AGG | - | chr3_4:61768851-61768870 | Msa0512140:CDS | 40.0% | |
| TATCAGGGTACAATTGATGC+AGG | - | chr3_4:61768867-61768886 | Msa0512140:intron | 40.0% | |
| ! | CCTCTCCTCTTTGATTTCTT+AGG | + | chr3_4:61769278-61769297 | None:intergenic | 40.0% |
| CCTAAGAAATCAAAGAGGAG+AGG | - | chr3_4:61769275-61769294 | Msa0512140:CDS | 40.0% | |
| AAGAAATCAAAGAGGAGAGG+TGG | - | chr3_4:61769278-61769297 | Msa0512140:CDS | 40.0% | |
| AATCAAAAAGTAGAGGTGGC+TGG | - | chr3_4:61769351-61769370 | Msa0512140:intron | 40.0% | |
| CCCCAAAGAAATCTAAGAGT+AGG | - | chr3_4:61769411-61769430 | Msa0512140:intron | 40.0% | |
| CCCCTACTCTTAGATTTCTT+TGG | + | chr3_4:61769416-61769435 | None:intergenic | 40.0% | |
| AAGAAATCTAAGAGTAGGGG+CGG | - | chr3_4:61769416-61769435 | Msa0512140:intron | 40.0% | |
| CCTCTGCTCTTGAATTTCAT+GGG | + | chr3_4:61769554-61769573 | None:intergenic | 40.0% | |
| ACCTCTGCTCTTGAATTTCA+TGG | + | chr3_4:61769555-61769574 | None:intergenic | 40.0% | |
| ATGAAATTCAAGAGCAGAGG+TGG | - | chr3_4:61769554-61769573 | Msa0512140:intron | 40.0% | |
| TGGAAGAAGAGAATTCTCCA+GGG | + | chr3_4:61769595-61769614 | None:intergenic | 40.0% | |
| TTGGAAGAAGAGAATTCTCC+AGG | + | chr3_4:61769596-61769615 | None:intergenic | 40.0% | |
| TCTCTTCTTCCAAGTCCAAT+AGG | - | chr3_4:61769603-61769622 | Msa0512140:intron | 40.0% | |
| AATATGTATGCGAGTGGTAG+TGG | - | chr3_4:61769668-61769687 | Msa0512140:intron | 40.0% | |
| TTTGGCAACTCCAATGATGA+TGG | - | chr3_4:61769809-61769828 | Msa0512140:intron | 40.0% | |
| AGTAATTCGGCATCAAGGTT+TGG | - | chr3_4:61769842-61769861 | Msa0512140:CDS | 40.0% | |
| ACTCTAGTGGTGAAGGATAT+AGG | - | chr3_4:61769867-61769886 | Msa0512140:CDS | 40.0% | |
| GATATAGGAGAGGTAATTGG+TGG | - | chr3_4:61769882-61769901 | Msa0512140:CDS | 40.0% | |
| CTGAGGTGTGCTGTAAGATT+AGG | - | chr3_4:61765651-61765670 | Msa0512140:three_prime_UTR | 45.0% | |
| !! | CGAGATTGTCGATTGATTCG+TGG | + | chr3_4:61765762-61765781 | None:intergenic | 45.0% |
| ACTCCTTCACTCGTATTCAG+CGG | - | chr3_4:61765793-61765812 | Msa0512140:three_prime_UTR | 45.0% | |
| AGATCTGAGTCTCAAGATCG+TGG | - | chr3_4:61765846-61765865 | Msa0512140:three_prime_UTR | 45.0% | |
| GTTTCGATTCTCGTGTTCGA+AGG | + | chr3_4:61765879-61765898 | None:intergenic | 45.0% | |
| ! | AGAAGCTCAGATTTCTGAGG+AGG | + | chr3_4:61765925-61765944 | None:intergenic | 45.0% |
| TTTAATGGCTGCAGAGCAAG+AGG | - | chr3_4:61766497-61766516 | Msa0512140:CDS | 45.0% | |
| GAAGCATGAATCTGTGGAAC+TGG | - | chr3_4:61766545-61766564 | Msa0512140:CDS | 45.0% | |
| GGATCAGATAGGTGACAACA+TGG | - | chr3_4:61766578-61766597 | Msa0512140:CDS | 45.0% | |
| ACCCAACTAAGCATTCCTTG+TGG | + | chr3_4:61766675-61766694 | None:intergenic | 45.0% | |
| TTGACCCTCCAGATAGTAGT+TGG | - | chr3_4:61766739-61766758 | Msa0512140:intron | 45.0% | |
| TGACCCTCCAGATAGTAGTT+GGG | - | chr3_4:61766740-61766759 | Msa0512140:intron | 45.0% | |
| ! | TGGGGAGCATGCTATAATTG+TGG | - | chr3_4:61766759-61766778 | Msa0512140:intron | 45.0% |
| AGCATGCTATAATTGTGGCG+AGG | - | chr3_4:61766764-61766783 | Msa0512140:intron | 45.0% | |
| TGCTATAATTGTGGCGAGGA+AGG | - | chr3_4:61766768-61766787 | Msa0512140:intron | 45.0% | |
| TAAACTGTACAGCAGCGAAG+CGG | - | chr3_4:61766802-61766821 | Msa0512140:intron | 45.0% | |
| AGGTATGTCTGCTTGCCTAT+TGG | - | chr3_4:61766880-61766899 | Msa0512140:CDS | 45.0% | |
| !! | GCTTGCCTATTGGCTTATGA+AGG | - | chr3_4:61766890-61766909 | Msa0512140:CDS | 45.0% |
| AGTTGCTACGTCTGCAAGAA+AGG | - | chr3_4:61766961-61766980 | Msa0512140:CDS | 45.0% | |
| ! | TCTCTGGACAGTCTTTTGCA+CGG | + | chr3_4:61766993-61767012 | None:intergenic | 45.0% |
| ! | ACGGGCTTCTAAAAGTCTGA+CGG | - | chr3_4:61767026-61767045 | Msa0512140:CDS | 45.0% |
| ! | TCAGATGGGTCATACTGGTT+CGG | - | chr3_4:61767356-61767375 | Msa0512140:intron | 45.0% |
| ! | CCTCGTACGAGAAAGTATAC+AGG | + | chr3_4:61767464-61767483 | None:intergenic | 45.0% |
| CCTGTATACTTTCTCGTACG+AGG | - | chr3_4:61767461-61767480 | Msa0512140:intron | 45.0% | |
| CAGAAAAAGGGACTTCGTAC+AGG | - | chr3_4:61767769-61767788 | Msa0512140:intron | 45.0% | |
| ! | TGGTAGGGCCTTATCTTTGT+TGG | - | chr3_4:61767987-61768006 | Msa0512140:intron | 45.0% |
| !! | GGCCTTATCTTTGTTGGTTC+AGG | - | chr3_4:61767993-61768012 | Msa0512140:intron | 45.0% |
| AGTCCACTAGTTACACGTAG+AGG | - | chr3_4:61768073-61768092 | Msa0512140:intron | 45.0% | |
| GTCCACTAGTTACACGTAGA+GGG | - | chr3_4:61768074-61768093 | Msa0512140:intron | 45.0% | |
| TTCCCTCTACGTGTAACTAG+TGG | + | chr3_4:61768079-61768098 | None:intergenic | 45.0% | |
| AGGTTGAACCACTGAGAACT+TGG | - | chr3_4:61768115-61768134 | Msa0512140:intron | 45.0% | |
| TGGGACATTAAAAGGTGGAG+GGG | + | chr3_4:61768339-61768358 | None:intergenic | 45.0% | |
| GCCATTGGGACATTAAAAGG+TGG | + | chr3_4:61768344-61768363 | None:intergenic | 45.0% | |
| GATGGACACTGATAGCCATT+GGG | + | chr3_4:61768358-61768377 | None:intergenic | 45.0% | |
| ! | TGATGGACACTGATAGCCAT+TGG | + | chr3_4:61768359-61768378 | None:intergenic | 45.0% |
| CCTTACAAGAGGATGGTTGA+TGG | + | chr3_4:61768376-61768395 | None:intergenic | 45.0% | |
| CCATCAACCATCCTCTTGTA+AGG | - | chr3_4:61768373-61768392 | Msa0512140:intron | 45.0% | |
| CCTATAGCACAAAGTAGGTG+TGG | + | chr3_4:61768806-61768825 | None:intergenic | 45.0% | |
| CCACACCTACTTTGTGCTAT+AGG | - | chr3_4:61768803-61768822 | Msa0512140:CDS | 45.0% | |
| CCACACCTATAGCACAAAGT+AGG | + | chr3_4:61768811-61768830 | None:intergenic | 45.0% | |
| CCTACTTTGTGCTATAGGTG+TGG | - | chr3_4:61768808-61768827 | Msa0512140:CDS | 45.0% | |
| TTGTGCTATAGGTGTGGTGA+AGG | - | chr3_4:61768814-61768833 | Msa0512140:CDS | 45.0% | |
| TCAAAGTGAGACTACTGGTG+CGG | - | chr3_4:61768903-61768922 | Msa0512140:intron | 45.0% | |
| CCTATAGCACAAAGTAGGTG+TGG | + | chr3_4:61768806-61768825 | None:intergenic | 45.0% | |
| CCACACCTACTTTGTGCTAT+AGG | - | chr3_4:61768803-61768822 | Msa0512140:CDS | 45.0% | |
| CCACACCTATAGCACAAAGT+AGG | + | chr3_4:61768811-61768830 | None:intergenic | 45.0% | |
| CCTACTTTGTGCTATAGGTG+TGG | - | chr3_4:61768808-61768827 | Msa0512140:CDS | 45.0% | |
| TTGTGCTATAGGTGTGGTGA+AGG | - | chr3_4:61768814-61768833 | Msa0512140:CDS | 45.0% | |
| TGTGCTATAGGTGTGGTGAA+GGG | - | chr3_4:61768815-61768834 | Msa0512140:CDS | 45.0% | |
| AAGCCTCTTTCGTCTGTATG+AGG | + | chr3_4:61769248-61769267 | None:intergenic | 45.0% | |
| TCTGCTCTTCGATTTCTTGG+GGG | + | chr3_4:61769483-61769502 | None:intergenic | 45.0% | |
| CTCTGCTCTTCGATTTCTTG+GGG | + | chr3_4:61769484-61769503 | None:intergenic | 45.0% | |
| CCTCTGCTCTTCGATTTCTT+GGG | + | chr3_4:61769485-61769504 | None:intergenic | 45.0% | |
| ACCTCTGCTCTTCGATTTCT+TGG | + | chr3_4:61769486-61769505 | None:intergenic | 45.0% | |
| AAGAAATCGAAGAGCAGAGG+TGG | - | chr3_4:61769485-61769504 | Msa0512140:intron | 45.0% | |
| CCCATGAAATTCAAGAGCAG+AGG | - | chr3_4:61769551-61769570 | Msa0512140:intron | 45.0% | |
| CTGAAGCCTCATATTCCCAA+GGG | - | chr3_4:61769747-61769766 | Msa0512140:intron | 45.0% | |
| GGAGAAGTAATTCGGCATCA+AGG | - | chr3_4:61769837-61769856 | Msa0512140:intron | 45.0% | |
| TCAAGGTTTGGCAACTCTAG+TGG | - | chr3_4:61769854-61769873 | Msa0512140:CDS | 45.0% | |
| TTTGGCAACTCTAGTGGTGA+AGG | - | chr3_4:61769860-61769879 | Msa0512140:CDS | 45.0% | |
| AGTGGTGAAGGATATAGGAG+AGG | - | chr3_4:61769872-61769891 | Msa0512140:CDS | 45.0% | |
| GGATCGAACTGAAAGACTTG+TGG | + | chr3_4:61770030-61770049 | None:intergenic | 45.0% | |
| ATCCACCCTTCAGGAAGTAA+TGG | - | chr3_4:61770046-61770065 | Msa0512140:CDS | 45.0% | |
| TCCACCCTTCAGGAAGTAAT+GGG | - | chr3_4:61770047-61770066 | Msa0512140:CDS | 45.0% | |
| TACGCCCATTACTTCCTGAA+GGG | + | chr3_4:61770054-61770073 | None:intergenic | 45.0% | |
| TGGAACTCCGACCGAATTCT+AGG | - | chr3_4:61765691-61765710 | Msa0512140:three_prime_UTR | 50.0% | |
| AACTCCGACCGAATTCTAGG+CGG | - | chr3_4:61765694-61765713 | Msa0512140:three_prime_UTR | 50.0% | |
| GAAGGAGAAGTCGAAAGCCA+AGG | - | chr3_4:61765729-61765748 | Msa0512140:three_prime_UTR | 50.0% | |
| TGATTCGTGGTCTCTTGCCT+TGG | + | chr3_4:61765749-61765768 | None:intergenic | 50.0% | |
| GCTGAATACGAGTGAAGGAG+TGG | + | chr3_4:61765794-61765813 | None:intergenic | 50.0% | |
| AGGTAAAACGGCGTCGTTAG+AGG | + | chr3_4:61765905-61765924 | None:intergenic | 50.0% | |
| CACCCACTTGGAGAATCACT+TGG | - | chr3_4:61766439-61766458 | Msa0512140:CDS | 50.0% | |
| GAAGCGAGTGTGGATCAGAT+AGG | - | chr3_4:61766567-61766586 | Msa0512140:CDS | 50.0% | |
| GACCCTCCAGATAGTAGTTG+GGG | - | chr3_4:61766741-61766760 | Msa0512140:intron | 50.0% | |
| CTCCCCAACTACTATCTGGA+GGG | + | chr3_4:61766746-61766765 | None:intergenic | 50.0% | |
| CATGCTCCCCAACTACTATC+TGG | + | chr3_4:61766750-61766769 | None:intergenic | 50.0% | |
| TCTTGCAGACGTAGCAACTC+TGG | + | chr3_4:61766960-61766979 | None:intergenic | 50.0% | |
| TGCTACGTCTGCAAGAAAGG+TGG | - | chr3_4:61766964-61766983 | Msa0512140:CDS | 50.0% | |
| ! | CAGAGAAGCACATGACTGCA+CGG | - | chr3_4:61767007-61767026 | Msa0512140:CDS | 50.0% |
| ! | AGAGAAGCACATGACTGCAC+GGG | - | chr3_4:61767008-61767027 | Msa0512140:CDS | 50.0% |
| CTGACGGTATGCTTGAAGTG+TGG | - | chr3_4:61767042-61767061 | Msa0512140:intron | 50.0% | |
| CAATGCTGCTGATGCAACAC+CGG | - | chr3_4:61767308-61767327 | Msa0512140:intron | 50.0% | |
| AATGCTGCTGATGCAACACC+GGG | - | chr3_4:61767309-61767328 | Msa0512140:intron | 50.0% | |
| TGTGGTCAGATGGGTCATAC+TGG | - | chr3_4:61767351-61767370 | Msa0512140:intron | 50.0% | |
| !!! | GGAGCAGTAGTTTTGTGGCA+TGG | + | chr3_4:61767701-61767720 | None:intergenic | 50.0% |
| !! | CCTGGTATTGGTAACCGTAG+CGG | - | chr3_4:61767880-61767899 | Msa0512140:intron | 50.0% |
| GGGACATTAAAAGGTGGAGG+GGG | + | chr3_4:61768338-61768357 | None:intergenic | 50.0% | |
| CAGGCATGTTCAAGGTTGCA+AGG | - | chr3_4:61768763-61768782 | Msa0512140:CDS | 50.0% | |
| AGGTTGCAAGGTGAGACTAC+TGG | - | chr3_4:61768775-61768794 | Msa0512140:CDS | 50.0% | |
| TGCTATAGGTGTGGTGAAGG+AGG | - | chr3_4:61768817-61768836 | Msa0512140:CDS | 50.0% | |
| GCTATAGGTGTGGTGAAGGA+GGG | - | chr3_4:61768818-61768837 | Msa0512140:CDS | 50.0% | |
| GTGCTATAGGTGTGGTGAAG+GGG | - | chr3_4:61768816-61768835 | Msa0512140:CDS | 50.0% | |
| TGCTATAGGTGTGGTGAAGG+GGG | - | chr3_4:61768817-61768836 | Msa0512140:CDS | 50.0% | |
| ! | ACTTCCGTGTTTTCCTCCAC+AGG | - | chr3_4:61769103-61769122 | Msa0512140:intron | 50.0% |
| CTATTCTTCTTCCCAGCCTG+TGG | + | chr3_4:61769122-61769141 | None:intergenic | 50.0% | |
| TTGGTCTGCACCTCTCGATA+TGG | - | chr3_4:61769199-61769218 | Msa0512140:intron | 50.0% | |
| TGGTCTGCACCTCTCGATAT+GGG | - | chr3_4:61769200-61769219 | Msa0512140:intron | 50.0% | |
| ! | TGCGTTTTGCCCATATCGAG+AGG | + | chr3_4:61769212-61769231 | None:intergenic | 50.0% |
| AATCAAAGAGGAGAGGTGGC+TGG | - | chr3_4:61769282-61769301 | Msa0512140:CDS | 50.0% | |
| AAGTAGAGGTGGCTGGACAA+TGG | - | chr3_4:61769358-61769377 | Msa0512140:intron | 50.0% | |
| CCCAAGAAATCGAAGAGCAG+AGG | - | chr3_4:61769482-61769501 | Msa0512140:intron | 50.0% | |
| AATTCAAGAGCAGAGGTGGC+TGG | - | chr3_4:61769558-61769577 | Msa0512140:intron | 50.0% | |
| CCAACTGGTCCTATTGGACT+TGG | + | chr3_4:61769615-61769634 | None:intergenic | 50.0% | |
| CCAAGTCCAATAGGACCAGT+TGG | - | chr3_4:61769612-61769631 | Msa0512140:intron | 50.0% | |
| AGGACTCCAACTGGTCCTAT+TGG | + | chr3_4:61769621-61769640 | None:intergenic | 50.0% | |
| CCTTGGGAATATGAGGCTTC+AGG | + | chr3_4:61769749-61769768 | None:intergenic | 50.0% | |
| CCTGAAGCCTCATATTCCCA+AGG | - | chr3_4:61769746-61769765 | Msa0512140:intron | 50.0% | |
| TTCAGTTCGATCCACCCTTC+AGG | - | chr3_4:61770037-61770056 | Msa0512140:CDS | 50.0% | |
| GTACGCCCATTACTTCCTGA+AGG | + | chr3_4:61770055-61770074 | None:intergenic | 50.0% | |
| CATGCCGCCTAGAATTCGGT+CGG | + | chr3_4:61765701-61765720 | None:intergenic | 55.0% | |
| GACCGAATTCTAGGCGGCAT+GGG | - | chr3_4:61765700-61765719 | Msa0512140:three_prime_UTR | 55.0% | |
| CTCCCATGCCGCCTAGAATT+CGG | + | chr3_4:61765705-61765724 | None:intergenic | 55.0% | |
| GAATTCTAGGCGGCATGGGA+GGG | - | chr3_4:61765704-61765723 | Msa0512140:three_prime_UTR | 55.0% | |
| CTGCCGCTGAATACGAGTGA+AGG | + | chr3_4:61765799-61765818 | None:intergenic | 55.0% | |
| AATGGCTGCAGAGCAAGAGG+TGG | - | chr3_4:61766500-61766519 | Msa0512140:CDS | 55.0% | |
| TGTGGAACTGGAAGCGAGTG+TGG | - | chr3_4:61766557-61766576 | Msa0512140:CDS | 55.0% | |
| GCTCCCCAACTACTATCTGG+AGG | + | chr3_4:61766747-61766766 | None:intergenic | 55.0% | |
| CGTGCAGTCATGTGCTTCTC+TGG | + | chr3_4:61767009-61767028 | None:intergenic | 55.0% | |
| CCGCTACGGTTACCAATACC+AGG | + | chr3_4:61767883-61767902 | None:intergenic | 55.0% | |
| GCTTCAGCTTGACTCCGCTA+CGG | + | chr3_4:61767897-61767916 | None:intergenic | 55.0% | |
| CCAGCCTGTGGAGGAAAACA+CGG | + | chr3_4:61769110-61769129 | None:intergenic | 55.0% | |
| ! | CGTGTTTTCCTCCACAGGCT+GGG | - | chr3_4:61769108-61769127 | Msa0512140:intron | 55.0% |
| TTCTTCTTCCCAGCCTGTGG+AGG | + | chr3_4:61769119-61769138 | None:intergenic | 55.0% | |
| CGGCCTCATACAGACGAAAG+AGG | - | chr3_4:61769242-61769261 | Msa0512140:CDS | 55.0% | |
| AATCTAAGAGTAGGGGCGGC+TGG | - | chr3_4:61769420-61769439 | Msa0512140:intron | 55.0% | |
| AATCGAAGAGCAGAGGTGGC+TGG | - | chr3_4:61769489-61769508 | Msa0512140:intron | 55.0% | |
| TAGGACCAGTTGGAGTCCTG+CGG | - | chr3_4:61769622-61769641 | Msa0512140:intron | 55.0% | |
| !! | GGTAGTGGAAGTCGAACTCC+AGG | - | chr3_4:61769683-61769702 | Msa0512140:intron | 55.0% |
| GTGGAAGTCGAACTCCAGGT+TGG | - | chr3_4:61769687-61769706 | Msa0512140:intron | 55.0% | |
| GGCTGACCCTTGGGAATATG+AGG | + | chr3_4:61769756-61769775 | None:intergenic | 55.0% | |
| !! | GAAAGCATCGGCTGACCCTT+GGG | + | chr3_4:61769765-61769784 | None:intergenic | 55.0% |
| GCCCATTACTTCCTGAAGGG+TGG | + | chr3_4:61770051-61770070 | None:intergenic | 55.0% | |
| CGACCGAATTCTAGGCGGCA+TGG | - | chr3_4:61765699-61765718 | Msa0512140:three_prime_UTR | 60.0% | |
| CGAATTCTAGGCGGCATGGG+AGG | - | chr3_4:61765703-61765722 | Msa0512140:three_prime_UTR | 60.0% | |
| CGAGTGAAGGAGTGGAAGCG+CGG | + | chr3_4:61765786-61765805 | None:intergenic | 60.0% | |
| ! | CCGTGTTTTCCTCCACAGGC+TGG | - | chr3_4:61769107-61769126 | Msa0512140:intron | 60.0% |
| GAGGAGAGGTGGCTGGATGA+CGG | - | chr3_4:61769289-61769308 | Msa0512140:CDS | 60.0% | |
| TAAGAGTAGGGGCGGCTGGA+CGG | - | chr3_4:61769424-61769443 | Msa0512140:intron | 60.0% | |
| GAGCAGAGGTGGCTGGACAA+CGG | - | chr3_4:61769496-61769515 | Msa0512140:intron | 60.0% | |
| CAAGAGCAGAGGTGGCTGGA+TGG | - | chr3_4:61769562-61769581 | Msa0512140:intron | 60.0% | |
| AGGACCAGTTGGAGTCCTGC+GGG | - | chr3_4:61769623-61769642 | Msa0512140:intron | 60.0% | |
| !! | GGAAAGCATCGGCTGACCCT+TGG | + | chr3_4:61769766-61769785 | None:intergenic | 60.0% |
| TTCTAGGCGGCATGGGAGGG+AGG | - | chr3_4:61765707-61765726 | Msa0512140:three_prime_UTR | 65.0% | |
| AAGAGTAGGGGCGGCTGGAC+GGG | - | chr3_4:61769425-61769444 | Msa0512140:intron | 65.0% | |
| GGCTGGATGGCTGATCACCC+TGG | - | chr3_4:61769575-61769594 | Msa0512140:intron | 65.0% | |
| GGACCAGTTGGAGTCCTGCG+GGG | - | chr3_4:61769624-61769643 | Msa0512140:intron | 65.0% | |
| TGTCCCCGCAGGACTCCAAC+TGG | + | chr3_4:61769630-61769649 | None:intergenic | 65.0% | |
| CTAGCAGATGGTGTCCCCGC+AGG | + | chr3_4:61769641-61769660 | None:intergenic | 65.0% | |
| AGGCGGCATGGGAGGGAGGA+AGG | - | chr3_4:61765711-61765730 | Msa0512140:three_prime_UTR | 70.0% | |
| AGAGTAGGGGCGGCTGGACG+GGG | - | chr3_4:61769426-61769445 | Msa0512140:intron | 70.0% | |
| GAGTAGGGGCGGCTGGACGG+GGG | - | chr3_4:61769427-61769446 | Msa0512140:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 61765593 | 61770232 | 61765593 | ID=Msa0512140;Name=Msa0512140 |
| chr3_4 | mRNA | 61765593 | 61770232 | 61765593 | ID=Msa0512140-mRNA-1;Parent=Msa0512140;Name=Msa0512140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=125|1|1|1|1|1|7|325|616 |
| chr3_4 | exon | 61765593 | 61766700 | 61765593 | ID=Msa0512140-mRNA-1:exon:15116;Parent=Msa0512140-mRNA-1 |
| chr3_4 | exon | 61766829 | 61767059 | 61766829 | ID=Msa0512140-mRNA-1:exon:15115;Parent=Msa0512140-mRNA-1 |
| chr3_4 | exon | 61768448 | 61768564 | 61768448 | ID=Msa0512140-mRNA-1:exon:15114;Parent=Msa0512140-mRNA-1 |
| chr3_4 | exon | 61768703 | 61768870 | 61768703 | ID=Msa0512140-mRNA-1:exon:15113;Parent=Msa0512140-mRNA-1 |
| chr3_4 | exon | 61768944 | 61769102 | 61768944 | ID=Msa0512140-mRNA-1:exon:15112;Parent=Msa0512140-mRNA-1 |
| chr3_4 | exon | 61769208 | 61769330 | 61769208 | ID=Msa0512140-mRNA-1:exon:15111;Parent=Msa0512140-mRNA-1 |
| chr3_4 | exon | 61769838 | 61770232 | 61769838 | ID=Msa0512140-mRNA-1:exon:15110;Parent=Msa0512140-mRNA-1 |
| chr3_4 | five_prime_UTR | 61770108 | 61770232 | 61770108 | ID=Msa0512140-mRNA-1:five_prime_utr;Parent=Msa0512140-mRNA-1 |
| chr3_4 | CDS | 61769838 | 61770107 | 61769838 | ID=Msa0512140-mRNA-1:cds;Parent=Msa0512140-mRNA-1 |
| chr3_4 | CDS | 61769208 | 61769330 | 61769208 | ID=Msa0512140-mRNA-1:cds;Parent=Msa0512140-mRNA-1 |
| chr3_4 | CDS | 61768944 | 61769102 | 61768944 | ID=Msa0512140-mRNA-1:cds;Parent=Msa0512140-mRNA-1 |
| chr3_4 | CDS | 61768703 | 61768870 | 61768703 | ID=Msa0512140-mRNA-1:cds;Parent=Msa0512140-mRNA-1 |
| chr3_4 | CDS | 61768448 | 61768564 | 61768448 | ID=Msa0512140-mRNA-1:cds;Parent=Msa0512140-mRNA-1 |
| chr3_4 | CDS | 61766829 | 61767059 | 61766829 | ID=Msa0512140-mRNA-1:cds;Parent=Msa0512140-mRNA-1 |
| chr3_4 | CDS | 61765918 | 61766700 | 61765918 | ID=Msa0512140-mRNA-1:cds;Parent=Msa0512140-mRNA-1 |
| chr3_4 | three_prime_UTR | 61765593 | 61765917 | 61765593 | ID=Msa0512140-mRNA-1:three_prime_utr;Parent=Msa0512140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
