AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0245430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0245430 MtrunA17_Chr2g0299501 98.547 344 4 1 1 343 1 344 0.0 681
Msa0245430 MtrunA17_Chr2g0330141 73.571 280 72 1 20 297 18 297 5.33e-138 397
Msa0245430 MtrunA17_Chr2g0299511 68.127 251 77 2 46 296 5 252 1.97e-121 352
Msa0245430 MtrunA17_Chr2g0299521 55.235 277 85 4 7 279 3 244 1.86e-87 263
Msa0245430 MtrunA17_Chr4g0060621 26.852 216 124 6 55 269 26 208 1.12e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0245430 AT2G19480.3 76.254 299 68 1 1 296 1 299 1.11e-154 439
Msa0245430 AT2G19480.2 76.254 299 68 1 1 296 1 299 2.41e-154 439
Msa0245430 AT2G19480.1 76.254 299 68 1 1 296 1 299 2.97e-154 439
Msa0245430 AT5G56950.1 77.076 301 66 1 1 298 1 301 4.40e-154 438
Msa0245430 AT4G26110.2 74.172 302 74 2 1 298 1 302 8.45e-149 424
Msa0245430 AT4G26110.1 74.172 302 74 2 1 298 1 302 9.26e-149 424
Msa0245430 AT3G13782.2 57.609 276 96 5 29 295 34 297 1.30e-98 295
Msa0245430 AT3G13782.1 57.609 276 96 5 29 295 34 297 1.30e-98 295
Msa0245430 AT1G74560.3 29.064 203 111 5 55 256 31 201 3.80e-16 77.8
Msa0245430 AT1G18800.1 29.304 273 140 8 55 326 27 247 1.28e-12 67.4
Msa0245430 AT1G74560.1 26.471 272 145 8 55 325 31 248 5.40e-11 62.8

Find 115 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCACTAATTCTCTTATT+AGG 0.056681 2_2:+25157008 None:intergenic
TTCATTATTACCAATATTTC+TGG 0.141009 2_2:-25153029 Msa0245430:three_prime_UTR
ACTCAAGCTTGAACCCTTTC+GGG 0.194636 2_2:+25154742 None:intergenic
CGACCGAGCTTGTCTTAATT+TGG 0.204014 2_2:+25157075 None:intergenic
AAGCACAAACTTTAAGTATC+TGG 0.208850 2_2:+25153050 None:intergenic
TCTCTTTCTCTCTATCTCTT+AGG 0.214664 2_2:-25156892 Msa0245430:five_prime_UTR
AGAAAGGAGTTCCTTCATTT+TGG 0.228811 2_2:-25154979 Msa0245430:CDS
TATGCTGCTGAAAGTTGTTT+TGG 0.256948 2_2:-25153269 Msa0245430:three_prime_UTR
AGCATTCTTTGCACCCTTCT+TGG 0.264967 2_2:+25154459 None:intergenic
ATTCACTAATTCTCTTATTA+GGG 0.267968 2_2:+25157009 None:intergenic
AACTCAAGCTTGAACCCTTT+CGG 0.280677 2_2:+25154741 None:intergenic
TCATCATCTTCAGGGACTTC+TGG 0.285909 2_2:+25154382 None:intergenic
TCTGAGTTTACCAGAAATAT+TGG 0.290692 2_2:+25153019 None:intergenic
CCAATTGCTTTCTCCAATAT+AGG 0.298193 2_2:+25154645 None:intergenic
GAGGGAGAAGGGCATTTAAA+AGG 0.308295 2_2:-25156972 Msa0245430:five_prime_UTR
TCAATGTCTTCATCATCTTC+AGG 0.308364 2_2:+25154373 None:intergenic
TGAGGTTCTCAGAGAGATTC+AGG 0.310287 2_2:-25156290 Msa0245430:intron
ACTGAAATTCAATGGCTTCC+TGG 0.313748 2_2:-25154517 Msa0245430:CDS
TCAGTGGTGTTGTGATTTAT+TGG 0.315678 2_2:-25153097 Msa0245430:three_prime_UTR
AGCAGCAATAGTTTGTTTCT+TGG 0.317359 2_2:-25153298 Msa0245430:three_prime_UTR
CATGCTGTATCATGGTTTAC+TGG 0.332154 2_2:-25154085 Msa0245430:CDS
TTATTGGTACTTCAATTCAT+AGG 0.340990 2_2:-25153081 Msa0245430:three_prime_UTR
GCATTCTTTGCACCCTTCTT+GGG 0.343448 2_2:+25154460 None:intergenic
CCTATATTGGAGAAAGCAAT+TGG 0.347426 2_2:-25154645 Msa0245430:CDS
GCTGCTCAGGGAGAGGAGTT+TGG 0.351764 2_2:-25154058 Msa0245430:CDS
GTCCTAGTGCCTGATGAAAA+AGG 0.368358 2_2:-25153245 Msa0245430:three_prime_UTR
GCAGCAATAGTTTGTTTCTT+GGG 0.375614 2_2:-25153297 Msa0245430:three_prime_UTR
GCTTTCACAAGTTTCAGTTT+TGG 0.387761 2_2:+25154426 None:intergenic
TGATGAGGATGAACCTATAT+TGG 0.398700 2_2:-25154658 Msa0245430:CDS
TCAACACGCTTCCTGACAAC+AGG 0.403613 2_2:+25156310 None:intergenic
TCAGCTTGGTGAGGGTCAGC+AGG 0.404930 2_2:-25153342 Msa0245430:exon
CCGAGCTTGTCTTAATTTGG+TGG 0.419342 2_2:+25157078 None:intergenic
GTTTACTGGAGAGGCTGCTC+AGG 0.421414 2_2:-25154071 Msa0245430:CDS
AGTAAGATTCAGAGTCTTGC+TGG 0.429764 2_2:-25156364 Msa0245430:CDS
TGGAAAATGCTTGACACAAA+AGG 0.436813 2_2:-25154497 Msa0245430:CDS
GCTAGTCATTGTTGAGAAAG+AGG 0.447685 2_2:+25156836 None:intergenic
TTTACAGTACTGAAATTCAA+TGG 0.452770 2_2:-25154525 Msa0245430:intron
TATTTCTGGTAAACTCAGAT+TGG 0.462672 2_2:-25153015 Msa0245430:three_prime_UTR
AGAGTCTATCCCCTGTTGTC+AGG 0.462985 2_2:-25156321 Msa0245430:CDS
CATCCTCATCTTCGTCATCC+AGG 0.463974 2_2:+25154032 None:intergenic
TCATCTTCAGGGACTTCTGG+TGG 0.470800 2_2:+25154385 None:intergenic
AATATCGCAGATCTCAGTTC+TGG 0.471484 2_2:-25156798 Msa0245430:intron
TCAGGGTGAACATGATGAAT+TGG 0.473046 2_2:-25155445 Msa0245430:intron
CAATGTCTTCATCATCTTCA+GGG 0.477299 2_2:+25154374 None:intergenic
TGAAGACATTGATGAAGATA+TGG 0.478182 2_2:-25154362 Msa0245430:intron
TAACAACCATCTCCAAAAGT+AGG 0.480184 2_2:+25153125 None:intergenic
AAATTCAGACTATAAAACTA+AGG 0.492846 2_2:+25153175 None:intergenic
AGCACAAACTTTAAGTATCT+GGG 0.499462 2_2:+25153051 None:intergenic
CTTGACGAAGACATATCATA+TGG 0.503732 2_2:-25154682 Msa0245430:CDS
TGGAACAGGACTACGACATC+GGG 0.507553 2_2:-25154240 Msa0245430:intron
TGAAGACGAGGACGAGGATG+AGG 0.508477 2_2:-25153984 Msa0245430:CDS
CTTTGTAGCTCTCAATGAAG+AGG 0.508531 2_2:-25156696 Msa0245430:intron
ACTTCAGAATCAGATGGAAC+AGG 0.508702 2_2:-25154254 Msa0245430:CDS
GGGAGAGGAGTTTGGAGACC+TGG 0.520670 2_2:-25154050 Msa0245430:CDS
GAACCTTGAGAGCGTTAACT+AGG 0.521908 2_2:+25156663 None:intergenic
CAATGATGTGTTATCTGAAG+AGG 0.523345 2_2:-25154939 Msa0245430:intron
TGGAGAGGCTGCTCAGGGAG+AGG 0.525371 2_2:-25154065 Msa0245430:CDS
TGAAGTGGAAGGGGCAGCAA+TGG 0.526387 2_2:-25155110 Msa0245430:CDS
TTTAAAAGGAGAGGAAACAT+AGG 0.533752 2_2:-25156958 Msa0245430:five_prime_UTR
TCAAAGATATCAAGTGGAGC+AGG 0.534183 2_2:-25154773 Msa0245430:CDS
AACAACCATCTCCAAAAGTA+GGG 0.539643 2_2:+25153126 None:intergenic
ATAGCATTGAGCCAAAATGA+AGG 0.543803 2_2:+25154968 None:intergenic
AAGGGTAGGAAAATGAATCA+AGG 0.543937 2_2:+25153194 None:intergenic
GCAGGATCGATGACCCGAAA+GGG 0.545024 2_2:-25154755 Msa0245430:CDS
ATGGAACAGGACTACGACAT+CGG 0.546712 2_2:-25154241 Msa0245430:CDS
CTATATTGGAGAAAGCAATT+GGG 0.546912 2_2:-25154644 Msa0245430:intron
CAAGATACCTTTGTGTACAA+TGG 0.547321 2_2:+25155363 None:intergenic
GGGTGAACATGATGAATTGG+AGG 0.547988 2_2:-25155442 Msa0245430:CDS
TGATGATGAAGACGAGGACG+AGG 0.548406 2_2:-25153990 Msa0245430:CDS
ATAGGATTAGAATCAGTTTG+AGG 0.551586 2_2:-25156940 Msa0245430:five_prime_UTR
AACTATTGCTGCTTGCACTC+TGG 0.556460 2_2:+25153308 None:intergenic
TAAGAGATAGAGAGAAAGAG+AGG 0.557396 2_2:+25156894 None:intergenic
AACTACAGCTGATGCAGAAG+AGG 0.562952 2_2:-25155086 Msa0245430:CDS
GACATATCATATGGTTGATG+AGG 0.564915 2_2:-25154673 Msa0245430:CDS
AAAAGGATTGCAATTTCATG+TGG 0.571094 2_2:-25153228 Msa0245430:three_prime_UTR
CAGTAAACCATGATACAGCA+TGG 0.577839 2_2:+25154086 None:intergenic
TGTTGTCAGGAAGCGTGTTG+AGG 0.580753 2_2:-25156308 Msa0245430:CDS
AATGTAGCAGTCAAATAGGT+CGG 0.580844 2_2:+25157050 None:intergenic
CAGCGATATGACATTGTGAA+TGG 0.586198 2_2:-25155139 Msa0245430:CDS
ACAATGACTAGCAACAAAGA+AGG 0.591497 2_2:-25156825 Msa0245430:CDS
AGTAAACCATGATACAGCAT+GGG 0.591975 2_2:+25154087 None:intergenic
CGGAATAGCTCAGCTTGGTG+AGG 0.592016 2_2:-25153351 Msa0245430:exon
TGACCTAGTTAACGCTCTCA+AGG 0.595969 2_2:-25156666 Msa0245430:intron
AGGGTAGGAAAATGAATCAA+GGG 0.596668 2_2:+25153195 None:intergenic
TATTGCTGCTTGCACTCTGG+TGG 0.598078 2_2:+25153311 None:intergenic
AGTTTCTCAAAGATATCAAG+TGG 0.598487 2_2:-25154779 Msa0245430:CDS
CAAATTAAGACAAGCTCGGT+CGG 0.598796 2_2:-25157074 Msa0245430:five_prime_UTR
CAGCTTGGTGAGGGTCAGCA+GGG 0.600234 2_2:-25153341 Msa0245430:exon
CAACACGCTTCCTGACAACA+GGG 0.603160 2_2:+25156311 None:intergenic
AGAAGGGCATTTAAAAGGAG+AGG 0.604172 2_2:-25156967 Msa0245430:five_prime_UTR
TGGTGTCACTGAAGTGGAAG+GGG 0.606118 2_2:-25155119 Msa0245430:CDS
GGAATAGCTCAGCTTGGTGA+GGG 0.608380 2_2:-25153350 Msa0245430:exon
AATTCAGACTATAAAACTAA+GGG 0.610731 2_2:+25153176 None:intergenic
TGTGAATGGTGTCACTGAAG+TGG 0.613436 2_2:-25155125 Msa0245430:CDS
CCACCAAATTAAGACAAGCT+CGG 0.615808 2_2:-25157078 Msa0245430:five_prime_UTR
AAGAGCGGAATAGCTCAGCT+TGG 0.620428 2_2:-25153356 Msa0245430:CDS
CGAAGACGACGATGAAGATG+AGG 0.621547 2_2:-25153960 Msa0245430:CDS
AGCAGGATCGATGACCCGAA+AGG 0.630998 2_2:-25154756 Msa0245430:CDS
CAGACTATAAAACTAAGGGT+AGG 0.631685 2_2:+25153180 None:intergenic
AAGAGATAGAGAGAAAGAGA+GGG 0.634937 2_2:+25156895 None:intergenic
TGAGGAACTTCAGAATCAGA+TGG 0.642126 2_2:-25154260 Msa0245430:CDS
AATGGTGTCACTGAAGTGGA+AGG 0.643089 2_2:-25155121 Msa0245430:CDS
TGTATCATGGTTTACTGGAG+AGG 0.647089 2_2:-25154080 Msa0245430:CDS
TTTACTGGAGAGGCTGCTCA+GGG 0.648747 2_2:-25154070 Msa0245430:CDS
AGACGACGATGAAGATGAGG+AGG 0.656233 2_2:-25153957 Msa0245430:CDS
ATGGTGTCACTGAAGTGGAA+GGG 0.679910 2_2:-25155120 Msa0245430:CDS
GTATCAACCATTGTACACAA+AGG 0.684901 2_2:-25155370 Msa0245430:intron
AGACCTGGATGACGAAGATG+AGG 0.691553 2_2:-25154035 Msa0245430:CDS
GATGGTTGTTATATAGTCAG+TGG 0.698201 2_2:-25153113 Msa0245430:three_prime_UTR
GGATGAAGACGATGATGCTG+AGG 0.698526 2_2:-25154014 Msa0245430:CDS
AACACGCTTCCTGACAACAG+GGG 0.701510 2_2:+25156312 None:intergenic
GCTGATGCAGAAGAGGACAA+TGG 0.706431 2_2:-25155079 Msa0245430:intron
GTAAACCATGATACAGCATG+GGG 0.729299 2_2:+25154088 None:intergenic
TGAGGATGATGATGAAGACG+AGG 0.747747 2_2:-25153996 Msa0245430:CDS
TAAACCATGATACAGCATGG+GGG 0.806442 2_2:+25154089 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTTAATTTATTTTTTAAC+AGG - chr2_2:25155739-25155758 Msa0245430:intron 10.0%
!! AGAATTAGTGAATTAAAAAA+AGG - chr2_2:25153024-25153043 Msa0245430:three_prime_UTR 15.0%
!! AAAAAAAAACAGAAAAATTC+GGG + chr2_2:25153285-25153304 None:intergenic 15.0%
!! CAAAAAAAAACAGAAAAATT+CGG + chr2_2:25153286-25153305 None:intergenic 15.0%
!!! TTTTGGATTATTGTTTATTA+AGG - chr2_2:25153606-25153625 Msa0245430:intron 15.0%
!! TTTGGATTATTGTTTATTAA+GGG - chr2_2:25153607-25153626 Msa0245430:intron 15.0%
!!! GTTTTCAAAAATCATAAAAT+AGG + chr2_2:25154322-25154341 None:intergenic 15.0%
!!! TAAGAATAAAATTTTACCTA+CGG + chr2_2:25154364-25154383 None:intergenic 15.0%
!! ACTCATTAAACATTATATAA+GGG + chr2_2:25154429-25154448 None:intergenic 15.0%
!!! ATTATTGAATCTTATTTGTA+TGG - chr2_2:25154804-25154823 Msa0245430:CDS 15.0%
!!! TTGTTATAATTTTTTCGTAA+TGG - chr2_2:25157068-25157087 Msa0245430:five_prime_UTR 15.0%
!! ATTCACTAATTCTCTTATTA+GGG + chr2_2:25153017-25153036 None:intergenic 20.0%
!! AATTCACTAATTCTCTTATT+AGG + chr2_2:25153018-25153037 None:intergenic 20.0%
!! TAACAACAAAACAAACAAAA+GGG + chr2_2:25153410-25153429 None:intergenic 20.0%
!! ATAACAACAAAACAAACAAA+AGG + chr2_2:25153411-25153430 None:intergenic 20.0%
!! TTAGGGTTTAATCAAAATTA+GGG + chr2_2:25153484-25153503 None:intergenic 20.0%
!! ATTAGGGTTTAATCAAAATT+AGG + chr2_2:25153485-25153504 None:intergenic 20.0%
!! TTAGGTGTTTATCAAAATTA+GGG + chr2_2:25153536-25153555 None:intergenic 20.0%
!! ATTAGGTGTTTATCAAAATT+AGG + chr2_2:25153537-25153556 None:intergenic 20.0%
!!! ATTAAACCCTAATTTTGTTT+TGG - chr2_2:25153565-25153584 Msa0245430:intron 20.0%
!! TCAAAACCAAAACAAAATTA+GGG + chr2_2:25153574-25153593 None:intergenic 20.0%
!!! TTTGAGTTTTGATGATTTTT+TGG - chr2_2:25153589-25153608 Msa0245430:intron 20.0%
!! AATCAAAACTCCAAAATTTA+GGG + chr2_2:25153765-25153784 None:intergenic 20.0%
!! ACAATCAATTAACAAATCAT+GGG + chr2_2:25153942-25153961 None:intergenic 20.0%
!!! TCTTTTATGGTATTTGTAAA+AGG - chr2_2:25154079-25154098 Msa0245430:CDS 20.0%
!! ATACATGATTAACATTCAAT+AGG - chr2_2:25154186-25154205 Msa0245430:intron 20.0%
!! TACATGATTAACATTCAATA+GGG - chr2_2:25154187-25154206 Msa0245430:intron 20.0%
!!! AAGAATAAAATTTTACCTAC+GGG + chr2_2:25154363-25154382 None:intergenic 20.0%
!! GACTCATTAAACATTATATA+AGG + chr2_2:25154430-25154449 None:intergenic 20.0%
!! GATAAATATATGAGAAGATT+AGG + chr2_2:25154477-25154496 None:intergenic 20.0%
!!! TTGATACAATTTTTGGTATT+TGG + chr2_2:25154640-25154659 None:intergenic 20.0%
!! AAGATCAAGTATGATTAAAT+TGG + chr2_2:25154765-25154784 None:intergenic 20.0%
!!! ATTGAAACAATAAAAGTGTA+AGG + chr2_2:25154989-25155008 None:intergenic 20.0%
!!! TCATTACAAAAGTACATTTA+TGG + chr2_2:25155169-25155188 None:intergenic 20.0%
!!! CAATCCATATTTTTCAAATT+CGG - chr2_2:25155317-25155336 Msa0245430:intron 20.0%
!!! GTTTTTTGCATTTGTAATTT+TGG - chr2_2:25155852-25155871 Msa0245430:intron 20.0%
!! AAGCATGAAAATTCATTTAA+GGG + chr2_2:25155884-25155903 None:intergenic 20.0%
!! TATTATTAGTTGAAATGTGT+TGG + chr2_2:25156410-25156429 None:intergenic 20.0%
!! AACACATTTCAACTAATAAT+AGG - chr2_2:25156409-25156428 Msa0245430:intron 20.0%
!! AATTCAGACTATAAAACTAA+GGG + chr2_2:25156850-25156869 None:intergenic 20.0%
!! AAATTCAGACTATAAAACTA+AGG + chr2_2:25156851-25156870 None:intergenic 20.0%
!! TTCATTATTACCAATATTTC+TGG - chr2_2:25156994-25157013 Msa0245430:five_prime_UTR 20.0%
!! TTTTAATGTAGCAGTCAAAT+AGG + chr2_2:25152980-25152999 None:intergenic 25.0%
! GCTACATTAAAAAGTAAAGA+AGG - chr2_2:25152988-25153007 Msa0245430:three_prime_UTR 25.0%
! TGAATTAAAAAAAGGAAGAG+AGG - chr2_2:25153032-25153051 Msa0245430:three_prime_UTR 25.0%
! GAATTAAAAAAAGGAAGAGA+GGG - chr2_2:25153033-25153052 Msa0245430:three_prime_UTR 25.0%
!!! TAGGGGTTTTATCAAAATTA+GGG + chr2_2:25153466-25153485 None:intergenic 25.0%
!!! TTAGGGGTTTTATCAAAATT+AGG + chr2_2:25153467-25153486 None:intergenic 25.0%
! TAGGGTTTAATCAAAATTAG+GGG + chr2_2:25153483-25153502 None:intergenic 25.0%
! TCAGGGTTTATTCAAAATTA+GGG + chr2_2:25153501-25153520 None:intergenic 25.0%
! ATCAGGGTTTATTCAAAATT+AGG + chr2_2:25153502-25153521 None:intergenic 25.0%
! TAGGTGTTTATCAAAATTAG+GGG + chr2_2:25153535-25153554 None:intergenic 25.0%
! GGGTTTAATCAATCAAAATT+AGG + chr2_2:25153554-25153573 None:intergenic 25.0%
! CTCAAAACCAAAACAAAATT+AGG + chr2_2:25153575-25153594 None:intergenic 25.0%
! CAATCAAAACTCCAAAATTT+AGG + chr2_2:25153766-25153785 None:intergenic 25.0%
!!! TGTGTTGTTTTATGCTTAAT+TGG - chr2_2:25153822-25153841 Msa0245430:intron 25.0%
!! TATTTCTGCTTTATAAAGTG+TGG - chr2_2:25153849-25153868 Msa0245430:intron 25.0%
! AGTGTATCAAAACAAATCAT+GGG + chr2_2:25153908-25153927 None:intergenic 25.0%
! AAGTGTATCAAAACAAATCA+TGG + chr2_2:25153909-25153928 None:intergenic 25.0%
! GACAATCAATTAACAAATCA+TGG + chr2_2:25153943-25153962 None:intergenic 25.0%
! GAGTAATAAAGTGAGTATTA+CGG + chr2_2:25153965-25153984 None:intergenic 25.0%
! AAGTAAATTGATCACTTTAG+AGG - chr2_2:25153990-25154009 Msa0245430:CDS 25.0%
!!! ATTACTTTTATTTTAGCGCT+TGG - chr2_2:25154245-25154264 Msa0245430:CDS 25.0%
!!! TTACTTTTATTTTAGCGCTT+GGG - chr2_2:25154246-25154265 Msa0245430:CDS 25.0%
!!! ATATTGTTTTATGACTGTTC+AGG - chr2_2:25154560-25154579 Msa0245430:intron 25.0%
!!! TATTGTTTTATGACTGTTCA+GGG - chr2_2:25154561-25154580 Msa0245430:intron 25.0%
!!! ACAATGGTTGATACAATTTT+TGG + chr2_2:25154647-25154666 None:intergenic 25.0%
! TATAGAGAAAATTGCATATC+AGG - chr2_2:25154702-25154721 Msa0245430:CDS 25.0%
! TACTGAACTTGTCTATAAAA+TGG - chr2_2:25154858-25154877 Msa0245430:intron 25.0%
! GTAAGAAGTTAACAACTTAA+CGG + chr2_2:25155123-25155142 None:intergenic 25.0%
! CGAATTTGAAAAATATGGAT+TGG + chr2_2:25155319-25155338 None:intergenic 25.0%
! AAGACCGAATTTGAAAAATA+TGG + chr2_2:25155324-25155343 None:intergenic 25.0%
!! TTTACAGTACTGAAATTCAA+TGG - chr2_2:25155498-25155517 Msa0245430:intron 25.0%
!!! ATTTATTTTTTAACAGGCTG+AGG - chr2_2:25155745-25155764 Msa0245430:intron 25.0%
! TTATGCTATAACAGACAAAT+AGG + chr2_2:25155821-25155840 None:intergenic 25.0%
! TTATAGCATAATAACTGTGA+TGG - chr2_2:25155830-25155849 Msa0245430:intron 25.0%
! GAAGCATGAAAATTCATTTA+AGG + chr2_2:25155885-25155904 None:intergenic 25.0%
!! GATTTGAAGTAGTGAATTAT+TGG - chr2_2:25156123-25156142 Msa0245430:intron 25.0%
! TCTATAACATGATTGCATTA+AGG + chr2_2:25156270-25156289 None:intergenic 25.0%
!! TTTGGCTTCATGAATTTATT+TGG - chr2_2:25156361-25156380 Msa0245430:CDS 25.0%
! TTATTGGTACTTCAATTCAT+AGG - chr2_2:25156942-25156961 Msa0245430:five_prime_UTR 25.0%
TTTAAAAGGAGAGGAAACAT+AGG - chr2_2:25153065-25153084 Msa0245430:three_prime_UTR 30.0%
ATAGGATTAGAATCAGTTTG+AGG - chr2_2:25153083-25153102 Msa0245430:three_prime_UTR 30.0%
!! TAGGGGTTTTATCAAAATCA+GGG + chr2_2:25153518-25153537 None:intergenic 30.0%
!! TTAGGGGTTTTATCAAAATC+AGG + chr2_2:25153519-25153538 None:intergenic 30.0%
! CAGGTATATTCCCTAAATTT+TGG - chr2_2:25153752-25153771 Msa0245430:intron 30.0%
!!! TGATTGATGCTAGTTTTTGT+TGG - chr2_2:25153780-25153799 Msa0245430:intron 30.0%
!!! CTAGTTTTTGTTGGTCTTTT+GGG - chr2_2:25153789-25153808 Msa0245430:intron 30.0%
ATCAATTAACAAATCATGGG+TGG + chr2_2:25153939-25153958 None:intergenic 30.0%
! TTAGTAGTCAGTGTCTTTTA+TGG - chr2_2:25154066-25154085 Msa0245430:CDS 30.0%
! GTTAATCATGTATAACTTGC+AGG + chr2_2:25154179-25154198 None:intergenic 30.0%
!!! TCTTAAACGCTAGAGTTTTT+TGG - chr2_2:25155143-25155162 Msa0245430:intron 30.0%
AGTTTCTCAAAGATATCAAG+TGG - chr2_2:25155244-25155263 Msa0245430:intron 30.0%
CTATATTGGAGAAAGCAATT+GGG - chr2_2:25155379-25155398 Msa0245430:CDS 30.0%
!!! CTATTAGTTTTGGTCAAAAG+TGG - chr2_2:25155433-25155452 Msa0245430:CDS 30.0%
!! CAAGTTTCAGTTTTGGTAAT+TGG + chr2_2:25155593-25155612 None:intergenic 30.0%
TGAAGACATTGATGAAGATA+TGG - chr2_2:25155661-25155680 Msa0245430:intron 30.0%
ACATTGATGAAGATATGGTA+TGG - chr2_2:25155666-25155685 Msa0245430:intron 30.0%
! ATGAATTTTCATGCTTCTTC+AGG - chr2_2:25155888-25155907 Msa0245430:intron 30.0%
!! TCATACCTTCTTTTTAGTCT+TGG + chr2_2:25156095-25156114 None:intergenic 30.0%
TTCCAAAGGAAATTAACATG+GGG + chr2_2:25156211-25156230 None:intergenic 30.0%
GTTCCAAAGGAAATTAACAT+GGG + chr2_2:25156212-25156231 None:intergenic 30.0%
! TATAGACACTTCCTTCATTT+TGG - chr2_2:25156284-25156303 Msa0245430:intron 30.0%
AGCAAACAAATCCAAAATGA+AGG + chr2_2:25156298-25156317 None:intergenic 30.0%
TAAATTCATGAAGCCAAAAG+TGG + chr2_2:25156359-25156378 None:intergenic 30.0%
TAAAGTGATACACTATTGCA+TGG - chr2_2:25156496-25156515 Msa0245430:intron 30.0%
! ATTGTATGTTTTCAGAAGAG+CGG - chr2_2:25156652-25156671 Msa0245430:intron 30.0%
!! AATTGCAATCCTTTTTCATC+AGG + chr2_2:25156790-25156809 None:intergenic 30.0%
AAAAGGATTGCAATTTCATG+TGG - chr2_2:25156795-25156814 Msa0245430:intron 30.0%
! CAATTTCATGTGGTTTTTCA+TGG - chr2_2:25156805-25156824 Msa0245430:CDS 30.0%
AGCACAAACTTTAAGTATCT+GGG + chr2_2:25156975-25156994 None:intergenic 30.0%
AAGCACAAACTTTAAGTATC+TGG + chr2_2:25156976-25156995 None:intergenic 30.0%
TCTGAGTTTACCAGAAATAT+TGG + chr2_2:25157007-25157026 None:intergenic 30.0%
!! TATTTCTGGTAAACTCAGAT+TGG - chr2_2:25157008-25157027 Msa0245430:five_prime_UTR 30.0%
! AATGCTACAAGTTTTTGTGT+GGG - chr2_2:25157037-25157056 Msa0245430:five_prime_UTR 30.0%
AATGTAGCAGTCAAATAGGT+CGG + chr2_2:25152976-25152995 None:intergenic 35.0%
AAGAGATAGAGAGAAAGAGA+GGG + chr2_2:25153131-25153150 None:intergenic 35.0%
TAAGAGATAGAGAGAAAGAG+AGG + chr2_2:25153132-25153151 None:intergenic 35.0%
TCTCTTTCTCTCTATCTCTT+AGG - chr2_2:25153131-25153150 Msa0245430:three_prime_UTR 35.0%
ACAATGACTAGCAACAAAGA+AGG - chr2_2:25153198-25153217 Msa0245430:three_prime_UTR 35.0%
!!! GCTAGTTTTTGTTGGTCTTT+TGG - chr2_2:25153788-25153807 Msa0245430:intron 35.0%
TCTCCAATCCATGTAACATA+GGG + chr2_2:25154022-25154041 None:intergenic 35.0%
ATCTCCAATCCATGTAACAT+AGG + chr2_2:25154023-25154042 None:intergenic 35.0%
AATCCTCTATTCAGTCACAT+GGG - chr2_2:25154124-25154143 Msa0245430:intron 35.0%
TATCAGAAGACAATATCACG+CGG + chr2_2:25154543-25154562 None:intergenic 35.0%
! TGAATTGGAGGCTAAGTTTT+TGG - chr2_2:25154593-25154612 Msa0245430:intron 35.0%
GTATCAACCATTGTACACAA+AGG - chr2_2:25154653-25154672 Msa0245430:CDS 35.0%
CAAGATACCTTTGTGTACAA+TGG + chr2_2:25154663-25154682 None:intergenic 35.0%
!! TTGTACACAAAGGTATCTTG+AGG - chr2_2:25154663-25154682 Msa0245430:CDS 35.0%
!!! CTTTTGACTTATGCAGAGAA+AGG - chr2_2:25155028-25155047 Msa0245430:intron 35.0%
! AGAAAGGAGTTCCTTCATTT+TGG - chr2_2:25155044-25155063 Msa0245430:intron 35.0%
! ATAGCATTGAGCCAAAATGA+AGG + chr2_2:25155058-25155077 None:intergenic 35.0%
CAATGATGTGTTATCTGAAG+AGG - chr2_2:25155084-25155103 Msa0245430:CDS 35.0%
CTTGACGAAGACATATCATA+TGG - chr2_2:25155341-25155360 Msa0245430:intron 35.0%
! GACATATCATATGGTTGATG+AGG - chr2_2:25155350-25155369 Msa0245430:intron 35.0%
TGATGAGGATGAACCTATAT+TGG - chr2_2:25155365-25155384 Msa0245430:intron 35.0%
CCAATTGCTTTCTCCAATAT+AGG + chr2_2:25155381-25155400 None:intergenic 35.0%
CCTATATTGGAGAAAGCAAT+TGG - chr2_2:25155378-25155397 Msa0245430:CDS 35.0%
!! TCGTTTTTATCTGATGCTGT+TGG - chr2_2:25155410-25155429 Msa0245430:CDS 35.0%
!! ATGCTGTTGGCTATTAGTTT+TGG - chr2_2:25155423-25155442 Msa0245430:CDS 35.0%
! TTTTGTGTCAAGCATTTTCC+AGG + chr2_2:25155527-25155546 None:intergenic 35.0%
TGGAAAATGCTTGACACAAA+AGG - chr2_2:25155526-25155545 Msa0245430:intron 35.0%
TTTGAAGAAAAAGCCCAAGA+AGG - chr2_2:25155550-25155569 Msa0245430:intron 35.0%
TTGAAGAAAAAGCCCAAGAA+GGG - chr2_2:25155551-25155570 Msa0245430:intron 35.0%
! GCTTTCACAAGTTTCAGTTT+TGG + chr2_2:25155600-25155619 None:intergenic 35.0%
CAATGTCTTCATCATCTTCA+GGG + chr2_2:25155652-25155671 None:intergenic 35.0%
TCAATGTCTTCATCATCTTC+AGG + chr2_2:25155653-25155672 None:intergenic 35.0%
TGATGAAGATATGGTATGGA+AGG - chr2_2:25155670-25155689 Msa0245430:intron 35.0%
AGTAAACCATGATACAGCAT+GGG + chr2_2:25155939-25155958 None:intergenic 35.0%
CGTTCCAAAGGAAATTAACA+TGG + chr2_2:25156213-25156232 None:intergenic 35.0%
GTACCCATATCAAAATCAGT+GGG - chr2_2:25156383-25156402 Msa0245430:intron 35.0%
!!! AGGAGTTTTGAAAAGAGTGT+TGG - chr2_2:25156429-25156448 Msa0245430:intron 35.0%
! TTGAATTCTGCTGTGCTATT+GGG + chr2_2:25156470-25156489 None:intergenic 35.0%
TTTGAATTCTGCTGTGCTAT+TGG + chr2_2:25156471-25156490 None:intergenic 35.0%
!! AGCAGCAATAGTTTGTTTCT+TGG - chr2_2:25156725-25156744 Msa0245430:intron 35.0%
!! GCAGCAATAGTTTGTTTCTT+GGG - chr2_2:25156726-25156745 Msa0245430:intron 35.0%
! TATGCTGCTGAAAGTTGTTT+TGG - chr2_2:25156754-25156773 Msa0245430:intron 35.0%
!! ATGCTGCTGAAAGTTGTTTT+GGG - chr2_2:25156755-25156774 Msa0245430:intron 35.0%
AGGGTAGGAAAATGAATCAA+GGG + chr2_2:25156831-25156850 None:intergenic 35.0%
AAGGGTAGGAAAATGAATCA+AGG + chr2_2:25156832-25156851 None:intergenic 35.0%
CAGACTATAAAACTAAGGGT+AGG + chr2_2:25156846-25156865 None:intergenic 35.0%
!!! CTTTTTTGTCTCCCTACTTT+TGG - chr2_2:25156886-25156905 Msa0245430:five_prime_UTR 35.0%
AACAACCATCTCCAAAAGTA+GGG + chr2_2:25156900-25156919 None:intergenic 35.0%
TAACAACCATCTCCAAAAGT+AGG + chr2_2:25156901-25156920 None:intergenic 35.0%
GATGGTTGTTATATAGTCAG+TGG - chr2_2:25156910-25156929 Msa0245430:five_prime_UTR 35.0%
!! TCAGTGGTGTTGTGATTTAT+TGG - chr2_2:25156926-25156945 Msa0245430:five_prime_UTR 35.0%
! CAATGCTACAAGTTTTTGTG+TGG - chr2_2:25157036-25157055 Msa0245430:five_prime_UTR 35.0%
CCACCAAATTAAGACAAGCT+CGG - chr2_2:25152945-25152964 Msa0245430:three_prime_UTR 40.0%
CAAATTAAGACAAGCTCGGT+CGG - chr2_2:25152949-25152968 Msa0245430:three_prime_UTR 40.0%
AAAAAAGGAAGAGAGGGAGA+AGG - chr2_2:25153039-25153058 Msa0245430:three_prime_UTR 40.0%
AAAAAGGAAGAGAGGGAGAA+GGG - chr2_2:25153040-25153059 Msa0245430:three_prime_UTR 40.0%
!! AGAAGGGCATTTAAAAGGAG+AGG - chr2_2:25153056-25153075 Msa0245430:three_prime_UTR 40.0%
GCTAGTCATTGTTGAGAAAG+AGG + chr2_2:25153190-25153209 None:intergenic 40.0%
AATATCGCAGATCTCAGTTC+TGG - chr2_2:25153225-25153244 Msa0245430:three_prime_UTR 40.0%
!! CAAGTGCTGATTGAGAAGAA+GGG + chr2_2:25153256-25153275 None:intergenic 40.0%
!! ACAAGTGCTGATTGAGAAGA+AGG + chr2_2:25153257-25153276 None:intergenic 40.0%
CTTTGTAGCTCTCAATGAAG+AGG - chr2_2:25153327-25153346 Msa0245430:three_prime_UTR 40.0%
AGTAAGATTCAGAGTCTTGC+TGG - chr2_2:25153659-25153678 Msa0245430:intron 40.0%
AGTGTGGAGTGAGAAGTTAA+AGG - chr2_2:25153865-25153884 Msa0245430:intron 40.0%
GTGTGGAGTGAGAAGTTAAA+GGG - chr2_2:25153866-25153885 Msa0245430:intron 40.0%
GTGAGAAGTTAAAGGGTTGT+TGG - chr2_2:25153873-25153892 Msa0245430:intron 40.0%
GGATTGATCCCTATGTTACA+TGG - chr2_2:25154011-25154030 Msa0245430:CDS 40.0%
GATCCCTATGTTACATGGAT+TGG - chr2_2:25154016-25154035 Msa0245430:CDS 40.0%
TGAATAGAGGATTGCAGTTC+AGG + chr2_2:25154117-25154136 None:intergenic 40.0%
CAATCCTCTATTCAGTCACA+TGG - chr2_2:25154123-25154142 Msa0245430:intron 40.0%
ATCCTCTATTCAGTCACATG+GGG - chr2_2:25154125-25154144 Msa0245430:intron 40.0%
TTAGCGCTTGGGAATCTATT+TGG - chr2_2:25154257-25154276 Msa0245430:CDS 40.0%
ACCTACGGGATATAAAGTCA+GGG + chr2_2:25154349-25154368 None:intergenic 40.0%
TACCTACGGGATATAAAGTC+AGG + chr2_2:25154350-25154369 None:intergenic 40.0%
TCAGGGTGAACATGATGAAT+TGG - chr2_2:25154578-25154597 Msa0245430:intron 40.0%
!! ATTGGAGGCTAAGTTTTTGG+AGG - chr2_2:25154596-25154615 Msa0245430:intron 40.0%
CAGCGATATGACATTGTGAA+TGG - chr2_2:25154884-25154903 Msa0245430:intron 40.0%
CTTCTCTACGAACTAGGTTA+CGG - chr2_2:25155200-25155219 Msa0245430:intron 40.0%
TCAAAGATATCAAGTGGAGC+AGG - chr2_2:25155250-25155269 Msa0245430:intron 40.0%
AACTCAAGCTTGAACCCTTT+CGG + chr2_2:25155285-25155304 None:intergenic 40.0%
ACTGAAATTCAATGGCTTCC+TGG - chr2_2:25155506-25155525 Msa0245430:intron 40.0%
TGAGGAACTTCAGAATCAGA+TGG - chr2_2:25155763-25155782 Msa0245430:intron 40.0%
ACTTCAGAATCAGATGGAAC+AGG - chr2_2:25155769-25155788 Msa0245430:intron 40.0%
TAAACCATGATACAGCATGG+GGG + chr2_2:25155937-25155956 None:intergenic 40.0%
GTAAACCATGATACAGCATG+GGG + chr2_2:25155938-25155957 None:intergenic 40.0%
CAGTAAACCATGATACAGCA+TGG + chr2_2:25155940-25155959 None:intergenic 40.0%
CATGCTGTATCATGGTTTAC+TGG - chr2_2:25155938-25155957 Msa0245430:intron 40.0%
TGTATCATGGTTTACTGGAG+AGG - chr2_2:25155943-25155962 Msa0245430:intron 40.0%
GGAGACCAAGACTAAAAAGA+AGG - chr2_2:25156087-25156106 Msa0245430:intron 40.0%
AAAGGAAATTAACATGGGGC+AGG + chr2_2:25156207-25156226 None:intergenic 40.0%
TGCCCCATGTTAATTTCCTT+TGG - chr2_2:25156206-25156225 Msa0245430:intron 40.0%
TGCTCGATGCTATATTGCTA+AGG - chr2_2:25156314-25156333 Msa0245430:CDS 40.0%
GGTACCCATATCAAAATCAG+TGG - chr2_2:25156382-25156401 Msa0245430:intron 40.0%
!!! GGTCCCACTGATTTTGATAT+GGG + chr2_2:25156389-25156408 None:intergenic 40.0%
!!! TGGTCCCACTGATTTTGATA+TGG + chr2_2:25156390-25156409 None:intergenic 40.0%
AAATTGAACGTCCAAAGCCA+TGG + chr2_2:25156616-25156635 None:intergenic 40.0%
!! TGCTGCTGAAAGTTGTTTTG+GGG - chr2_2:25156756-25156775 Msa0245430:intron 40.0%
!! ATCCTTTTTCATCAGGCACT+AGG + chr2_2:25156783-25156802 None:intergenic 40.0%
! CCGAGCTTGTCTTAATTTGG+TGG + chr2_2:25152948-25152967 None:intergenic 45.0%
CGACCGAGCTTGTCTTAATT+TGG + chr2_2:25152951-25152970 None:intergenic 45.0%
!! GAGGGAGAAGGGCATTTAAA+AGG - chr2_2:25153051-25153070 Msa0245430:three_prime_UTR 45.0%
TGACCTAGTTAACGCTCTCA+AGG - chr2_2:25153357-25153376 Msa0245430:CDS 45.0%
!! GAACCTTGAGAGCGTTAACT+AGG + chr2_2:25153363-25153382 None:intergenic 45.0%
TGAGGTTCTCAGAGAGATTC+AGG - chr2_2:25153733-25153752 Msa0245430:intron 45.0%
ACCCTGACTTTATATCCCGT+AGG - chr2_2:25154345-25154364 Msa0245430:intron 45.0%
TGAGCTACCCAGCAAAGATA+AGG - chr2_2:25154514-25154533 Msa0245430:CDS 45.0%
GCGGAAACCTTATCTTTGCT+GGG + chr2_2:25154524-25154543 None:intergenic 45.0%
GGGTGAACATGATGAATTGG+AGG - chr2_2:25154581-25154600 Msa0245430:intron 45.0%
!! TGTGAATGGTGTCACTGAAG+TGG - chr2_2:25154898-25154917 Msa0245430:intron 45.0%
!! AATGGTGTCACTGAAGTGGA+AGG - chr2_2:25154902-25154921 Msa0245430:intron 45.0%
!! ATGGTGTCACTGAAGTGGAA+GGG - chr2_2:25154903-25154922 Msa0245430:intron 45.0%
AACTACAGCTGATGCAGAAG+AGG - chr2_2:25154937-25154956 Msa0245430:intron 45.0%
ATGCAGAAGAGGACAATGGT+AGG - chr2_2:25154948-25154967 Msa0245430:CDS 45.0%
AAGAGGACAATGGTAGGAGT+TGG - chr2_2:25154954-25154973 Msa0245430:CDS 45.0%
AGAGGACAATGGTAGGAGTT+GGG - chr2_2:25154955-25154974 Msa0245430:CDS 45.0%
ACCTAGTTCGTAGAGAAGCA+GGG + chr2_2:25155198-25155217 None:intergenic 45.0%
AACCTAGTTCGTAGAGAAGC+AGG + chr2_2:25155199-25155218 None:intergenic 45.0%
ACTCAAGCTTGAACCCTTTC+GGG + chr2_2:25155284-25155303 None:intergenic 45.0%
GAGAAAGCAATTGGGTAAGC+TGG - chr2_2:25155387-25155406 Msa0245430:CDS 45.0%
GCATTCTTTGCACCCTTCTT+GGG + chr2_2:25155566-25155585 None:intergenic 45.0%
AGCATTCTTTGCACCCTTCT+TGG + chr2_2:25155567-25155586 None:intergenic 45.0%
TCATCATCTTCAGGGACTTC+TGG + chr2_2:25155644-25155663 None:intergenic 45.0%
ATGGAACAGGACTACGACAT+CGG - chr2_2:25155782-25155801 Msa0245430:intron 45.0%
! TGAGGATGATGATGAAGACG+AGG - chr2_2:25156027-25156046 Msa0245430:intron 45.0%
! ACCAACACACACTCCACTTT+TGG - chr2_2:25156343-25156362 Msa0245430:CDS 45.0%
!! TGCATGGTGCTGTCAAATAG+TGG - chr2_2:25156512-25156531 Msa0245430:intron 45.0%
! AACTATTGCTGCTTGCACTC+TGG + chr2_2:25156718-25156737 None:intergenic 45.0%
GTCCTAGTGCCTGATGAAAA+AGG - chr2_2:25156778-25156797 Msa0245430:intron 45.0%
!! TGTCTCCCTACTTTTGGAGA+TGG - chr2_2:25156892-25156911 Msa0245430:five_prime_UTR 45.0%
!! ATATTAATAAAATGAAAAAA+TGG + chr2_2:25154299-25154318 None:intergenic 5.0%
AGAGTCTATCCCCTGTTGTC+AGG - chr2_2:25153702-25153721 Msa0245430:intron 50.0%
AACACGCTTCCTGACAACAG+GGG + chr2_2:25153714-25153733 None:intergenic 50.0%
CAACACGCTTCCTGACAACA+GGG + chr2_2:25153715-25153734 None:intergenic 50.0%
TCAACACGCTTCCTGACAAC+AGG + chr2_2:25153716-25153735 None:intergenic 50.0%
! TGTTGTCAGGAAGCGTGTTG+AGG - chr2_2:25153715-25153734 Msa0245430:intron 50.0%
GACCCCATGTGACTGAATAG+AGG + chr2_2:25154130-25154149 None:intergenic 50.0%
AGCCTCAGGGTTACAATTGG+AGG + chr2_2:25154154-25154173 None:intergenic 50.0%
GAGAGCCTCAGGGTTACAAT+TGG + chr2_2:25154157-25154176 None:intergenic 50.0%
! TAACTTGCAGGAGAGCCTCA+GGG + chr2_2:25154167-25154186 None:intergenic 50.0%
! ATAACTTGCAGGAGAGCCTC+AGG + chr2_2:25154168-25154187 None:intergenic 50.0%
CGCGGAAACCTTATCTTTGC+TGG + chr2_2:25154525-25154544 None:intergenic 50.0%
!! TGGTGTCACTGAAGTGGAAG+GGG - chr2_2:25154904-25154923 Msa0245430:intron 50.0%
GCTGATGCAGAAGAGGACAA+TGG - chr2_2:25154944-25154963 Msa0245430:CDS 50.0%
TCCCTGCTTCTCTACGAACT+AGG - chr2_2:25155194-25155213 Msa0245430:intron 50.0%
TCATCTTCAGGGACTTCTGG+TGG + chr2_2:25155641-25155660 None:intergenic 50.0%
TGGAACAGGACTACGACATC+GGG - chr2_2:25155783-25155802 Msa0245430:intron 50.0%
TCATCCCCCATGCTGTATCA+TGG - chr2_2:25155930-25155949 Msa0245430:intron 50.0%
TTTACTGGAGAGGCTGCTCA+GGG - chr2_2:25155953-25155972 Msa0245430:intron 50.0%
AGACCTGGATGACGAAGATG+AGG - chr2_2:25155988-25156007 Msa0245430:intron 50.0%
CATCCTCATCTTCGTCATCC+AGG + chr2_2:25155994-25156013 None:intergenic 50.0%
GGATGAAGACGATGATGCTG+AGG - chr2_2:25156009-25156028 Msa0245430:intron 50.0%
! TGATGATGAAGACGAGGACG+AGG - chr2_2:25156033-25156052 Msa0245430:intron 50.0%
CGAAGACGACGATGAAGATG+AGG - chr2_2:25156063-25156082 Msa0245430:intron 50.0%
AGACGACGATGAAGATGAGG+AGG - chr2_2:25156066-25156085 Msa0245430:intron 50.0%
GGAAATTAACATGGGGCAGG+TGG + chr2_2:25156204-25156223 None:intergenic 50.0%
TGACTGCAGCAACGTTCCAA+AGG + chr2_2:25156225-25156244 None:intergenic 50.0%
GTTGCTGCAGTCATCTGCTA+AGG - chr2_2:25156232-25156251 Msa0245430:intron 50.0%
GCCAAAAGTGGAGTGTGTGT+TGG + chr2_2:25156347-25156366 None:intergenic 50.0%
!! CATGGAGGTGCTGTCAATCA+CGG + chr2_2:25156598-25156617 None:intergenic 50.0%
TTGAACGTCCAAAGCCATGG+AGG + chr2_2:25156613-25156632 None:intergenic 50.0%
AAGAGCGGAATAGCTCAGCT+TGG - chr2_2:25156667-25156686 Msa0245430:CDS 50.0%
! GGAATAGCTCAGCTTGGTGA+GGG - chr2_2:25156673-25156692 Msa0245430:CDS 50.0%
! TATTGCTGCTTGCACTCTGG+TGG + chr2_2:25156715-25156734 None:intergenic 50.0%
CGCCTCCAATTGTAACCCTG+AGG - chr2_2:25154149-25154168 Msa0245430:intron 55.0%
TGAAGTGGAAGGGGCAGCAA+TGG - chr2_2:25154913-25154932 Msa0245430:intron 55.0%
AGCAGGATCGATGACCCGAA+AGG - chr2_2:25155267-25155286 Msa0245430:intron 55.0%
GCAGGATCGATGACCCGAAA+GGG - chr2_2:25155268-25155287 Msa0245430:intron 55.0%
GTTTACTGGAGAGGCTGCTC+AGG - chr2_2:25155952-25155971 Msa0245430:intron 55.0%
TGAAGACGAGGACGAGGATG+AGG - chr2_2:25156039-25156058 Msa0245430:intron 55.0%
! GCTGTGCTATTGGGCAGCTA+TGG + chr2_2:25156461-25156480 None:intergenic 55.0%
CGTGATTGACAGCACCTCCA+TGG - chr2_2:25156596-25156615 Msa0245430:intron 55.0%
TGACAGCACCTCCATGGCTT+TGG - chr2_2:25156602-25156621 Msa0245430:intron 55.0%
! CGGAATAGCTCAGCTTGGTG+AGG - chr2_2:25156672-25156691 Msa0245430:CDS 55.0%
GCTGCTCAGGGAGAGGAGTT+TGG - chr2_2:25155965-25155984 Msa0245430:intron 60.0%
GGGAGAGGAGTTTGGAGACC+TGG - chr2_2:25155973-25155992 Msa0245430:intron 60.0%
! TCAGCTTGGTGAGGGTCAGC+AGG - chr2_2:25156681-25156700 Msa0245430:CDS 60.0%
! CAGCTTGGTGAGGGTCAGCA+GGG - chr2_2:25156682-25156701 Msa0245430:CDS 60.0%
TGGAGAGGCTGCTCAGGGAG+AGG - chr2_2:25155958-25155977 Msa0245430:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 25152933 25157112 25152933 ID=Msa0245430;Name=Msa0245430
chr2_2 mRNA 25152933 25157112 25152933 ID=Msa0245430-mRNA-1;Parent=Msa0245430;Name=Msa0245430-mRNA-1;_AED=0.11;_eAED=0.11;_QI=268|1|1|1|0.9|0.90|11|420|354
chr2_2 exon 25152933 25153391 25152933 ID=Msa0245430-mRNA-1:exon:9476;Parent=Msa0245430-mRNA-1
chr2_2 exon 25153937 25154135 25153937 ID=Msa0245430-mRNA-1:exon:9475;Parent=Msa0245430-mRNA-1
chr2_2 exon 25154241 25154284 25154241 ID=Msa0245430-mRNA-1:exon:9474;Parent=Msa0245430-mRNA-1
chr2_2 exon 25154363 25154540 25154363 ID=Msa0245430-mRNA-1:exon:9473;Parent=Msa0245430-mRNA-1
chr2_2 exon 25154645 25154829 25154645 ID=Msa0245430-mRNA-1:exon:9472;Parent=Msa0245430-mRNA-1
chr2_2 exon 25154940 25155001 25154940 ID=Msa0245430-mRNA-1:exon:9471;Parent=Msa0245430-mRNA-1
chr2_2 exon 25155080 25155158 25155080 ID=Msa0245430-mRNA-1:exon:9470;Parent=Msa0245430-mRNA-1
chr2_2 exon 25155371 25155463 25155371 ID=Msa0245430-mRNA-1:exon:9469;Parent=Msa0245430-mRNA-1
chr2_2 exon 25156291 25156386 25156291 ID=Msa0245430-mRNA-1:exon:9468;Parent=Msa0245430-mRNA-1
chr2_2 exon 25156667 25156710 25156667 ID=Msa0245430-mRNA-1:exon:9467;Parent=Msa0245430-mRNA-1
chr2_2 exon 25156799 25157112 25156799 ID=Msa0245430-mRNA-1:exon:9466;Parent=Msa0245430-mRNA-1
chr2_2 five_prime_UTR 25156845 25157112 25156845 ID=Msa0245430-mRNA-1:five_prime_utr;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25156799 25156844 25156799 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25156667 25156710 25156667 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25156291 25156386 25156291 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25155371 25155463 25155371 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25155080 25155158 25155080 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25154940 25155001 25154940 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25154645 25154829 25154645 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25154363 25154540 25154363 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25154241 25154284 25154241 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25153937 25154135 25153937 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 CDS 25153353 25153391 25153353 ID=Msa0245430-mRNA-1:cds;Parent=Msa0245430-mRNA-1
chr2_2 three_prime_UTR 25152933 25153352 25152933 ID=Msa0245430-mRNA-1:three_prime_utr;Parent=Msa0245430-mRNA-1
Gene Sequence

>Msa0245430

ATGACTAGCAACAAAGAAGGTTTCAATATCGCAGATCTCAGTTCTGCTCTCAATGAAGAGGATCGTGCTGACCTAGTTAACGCTCTCAAGAGTAAGATTCAGAGTCTTGCTGGACAGCACTCTGATGTTCTAGAGAGTCTATCCCCTGTTGTCAGGAAGCGTGTTGAGGTTCTCAGAGAGATTCAGGGTGAACATGATGAATTGGAGGCTAAGTTTTTGGAGGAGAGAGCAGCTCTTGAAGCCAAATACCAAAAATTGTATCAACCATTGTACACAAAGCGATATGACATTGTGAATGGTGTCACTGAAGTGGAAGGGGCAGCAATGGAAACTACAGCTGATGCAGAAGAGGACAATGAGAAAGGAGTTCCTTCATTTTGGCTCAATGCTATGAAAAACAATGATGTGTTATCTGAAGAGGTTACGGAGCGCGATGAAGCTGCTCTCAAGTTTCTCAAAGATATCAAGTGGAGCAGGATCGATGACCCGAAAGGGTTCAAGCTTGAGTTCTTCTTTGATACCAATCCATATTTTTCAAATTCGGTCTTGACGAAGACATATCATATGGTTGATGAGGATGAACCTATATTGGAGAAAGCAATTGGTACTGAAATTCAATGGCTTCCTGGAAAATGCTTGACACAAAAGGTTTTGAAGAAAAAGCCCAAGAAGGGTGCAAAGAATGCTAAACCAATTACCAAAACTGAAACTTGTGAAAGCTTCTTCAACTTTTTCAATCCACCAGAAGTCCCTGAAGATGATGAAGACATTGATGAAGATATGGCTGAGGAACTTCAGAATCAGATGGAACAGGACTACGACATCGGGTCAACAATAAGAGATAAGATCATCCCCCATGCTGTATCATGGTTTACTGGAGAGGCTGCTCAGGGAGAGGAGTTTGGAGACCTGGATGACGAAGATGAGGATGAAGACGATGATGCTGAGGATGATGATGAAGACGAGGACGAGGATGAGGACGAAGACGACGATGAAGATGAGGAGGAGACCAAGACTAAAAAGAAGTGTATGTTTTCAGAAGAGCGGAATAGCTCAGCTTGGTGA

Protein sequence

>Msa0245430

MTSNKEGFNIADLSSALNEEDRADLVNALKSKIQSLAGQHSDVLESLSPVVRKRVEVLREIQGEHDELEAKFLEERAALEAKYQKLYQPLYTKRYDIVNGVTEVEGAAMETTADAEEDNEKGVPSFWLNAMKNNDVLSEEVTERDEAALKFLKDIKWSRIDDPKGFKLEFFFDTNPYFSNSVLTKTYHMVDEDEPILEKAIGTEIQWLPGKCLTQKVLKKKPKKGAKNAKPITKTETCESFFNFFNPPEVPEDDEDIDEDMAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAAQGEEFGDLDDEDEDEDDDAEDDDEDEDEDEDEDDDEDEEETKTKKKCMFSEERNSSAW*