Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0527260 | XP_013466211.1 | 95.536 | 560 | 18 | 1 | 1 | 553 | 1 | 560 | 0.0 | 1098 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0527260 | sp|M4IQR7|CCL5_HUMLU | 75.632 | 554 | 125 | 4 | 6 | 553 | 2 | 551 | 0.0 | 863 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0527260 | A0A072VEL9 | 95.536 | 560 | 18 | 1 | 1 | 553 | 1 | 560 | 0.0 | 1098 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0051050 | Msa0527260 | 0.824153 | 9.415906e-54 | -8.615850e-47 |
Msa0101240 | Msa0527260 | 0.822456 | 2.346261e-53 | -8.615850e-47 |
Msa0527260 | Msa0614380 | 0.815772 | 7.790640e-52 | -8.615850e-47 |
Msa0527260 | Msa1186240 | 0.825804 | 3.839198e-54 | -8.615850e-47 |
Msa0527260 | Msa1360420 | 0.818220 | 2.196038e-52 | -8.615850e-47 |
Msa0527260 | Msa1371590 | 0.998550 | 1.770847e-268 | -8.615850e-47 |
Msa0527260 | Msa1379700 | 0.993010 | 7.275098e-197 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0527260 | MtrunA17_Chr1g0157401 | 95.536 | 560 | 18 | 1 | 1 | 553 | 1 | 560 | 0.0 | 1098 |
Msa0527260 | MtrunA17_Chr8g0353341 | 80.189 | 530 | 87 | 5 | 1 | 516 | 1 | 526 | 0.0 | 858 |
Msa0527260 | MtrunA17_Chr1g0157431 | 94.000 | 350 | 14 | 1 | 1 | 343 | 1 | 350 | 0.0 | 675 |
Msa0527260 | MtrunA17_Chr4g0028411 | 45.672 | 543 | 286 | 5 | 17 | 553 | 3 | 542 | 4.24e-162 | 472 |
Msa0527260 | MtrunA17_Chr4g0039791 | 44.624 | 558 | 297 | 5 | 4 | 553 | 8 | 561 | 4.21e-161 | 470 |
Msa0527260 | MtrunA17_Chr3g0116271 | 45.307 | 554 | 270 | 11 | 14 | 549 | 16 | 554 | 6.77e-160 | 467 |
Msa0527260 | MtrunA17_Chr5g0409771 | 43.750 | 560 | 303 | 6 | 1 | 553 | 1 | 555 | 8.97e-159 | 464 |
Msa0527260 | MtrunA17_Chr1g0197391 | 46.875 | 544 | 271 | 8 | 15 | 546 | 22 | 559 | 3.36e-158 | 463 |
Msa0527260 | MtrunA17_Chr3g0116251 | 44.464 | 560 | 277 | 12 | 7 | 549 | 10 | 552 | 2.68e-157 | 461 |
Msa0527260 | MtrunA17_Chr2g0327341 | 43.693 | 547 | 288 | 6 | 17 | 553 | 3 | 539 | 3.37e-153 | 449 |
Msa0527260 | MtrunA17_Chr5g0409791 | 44.973 | 547 | 277 | 9 | 26 | 553 | 27 | 568 | 2.62e-152 | 448 |
Msa0527260 | MtrunA17_Chr1g0180541 | 43.808 | 541 | 288 | 8 | 27 | 553 | 13 | 551 | 5.48e-145 | 429 |
Msa0527260 | MtrunA17_Chr1g0180551 | 43.486 | 545 | 288 | 8 | 27 | 553 | 82 | 624 | 1.17e-142 | 425 |
Msa0527260 | MtrunA17_Chr1g0186071 | 43.796 | 548 | 283 | 10 | 8 | 547 | 20 | 550 | 2.32e-139 | 415 |
Msa0527260 | MtrunA17_Chr4g0072561 | 38.593 | 526 | 315 | 4 | 26 | 545 | 17 | 540 | 5.58e-118 | 360 |
Msa0527260 | MtrunA17_Chr3g0102411 | 35.261 | 536 | 323 | 7 | 20 | 543 | 8 | 531 | 1.58e-116 | 356 |
Msa0527260 | MtrunA17_Chr5g0395431 | 39.212 | 533 | 303 | 8 | 26 | 545 | 55 | 579 | 2.71e-116 | 356 |
Msa0527260 | MtrunA17_Chr4g0000461 | 40.341 | 528 | 303 | 8 | 26 | 545 | 11 | 534 | 5.28e-114 | 349 |
Msa0527260 | MtrunA17_Chr2g0334131 | 50.357 | 280 | 129 | 4 | 272 | 545 | 1 | 276 | 2.34e-86 | 269 |
Msa0527260 | MtrunA17_Chr6g0471921 | 28.880 | 509 | 335 | 13 | 44 | 543 | 15 | 505 | 5.33e-52 | 185 |
Msa0527260 | MtrunA17_Chr8g0370701 | 27.843 | 510 | 317 | 15 | 67 | 542 | 81 | 573 | 6.65e-47 | 173 |
Msa0527260 | MtrunA17_Chr3g0109731 | 27.308 | 520 | 329 | 13 | 65 | 545 | 37 | 546 | 7.54e-46 | 169 |
Msa0527260 | MtrunA17_Chr5g0396311 | 27.621 | 496 | 326 | 12 | 68 | 539 | 40 | 526 | 7.80e-44 | 163 |
Msa0527260 | MtrunA17_Chr5g0433241 | 26.705 | 528 | 318 | 14 | 68 | 549 | 40 | 544 | 2.19e-41 | 157 |
Msa0527260 | MtrunA17_Chr5g0396331 | 25.605 | 496 | 334 | 13 | 68 | 539 | 40 | 524 | 5.61e-39 | 150 |
Msa0527260 | MtrunA17_Chr8g0370731 | 27.101 | 476 | 302 | 15 | 98 | 542 | 23 | 484 | 2.54e-37 | 144 |
Msa0527260 | MtrunA17_Chr2g0301671 | 24.723 | 542 | 359 | 17 | 49 | 553 | 29 | 558 | 1.02e-36 | 144 |
Msa0527260 | MtrunA17_Chr5g0433231 | 25.528 | 521 | 334 | 11 | 68 | 549 | 40 | 545 | 1.54e-36 | 143 |
Msa0527260 | MtrunA17_Chr5g0433221 | 25.434 | 519 | 337 | 11 | 68 | 549 | 40 | 545 | 1.77e-36 | 143 |
Msa0527260 | MtrunA17_Chr4g0068151 | 24.670 | 531 | 347 | 14 | 67 | 553 | 45 | 566 | 4.29e-35 | 139 |
Msa0527260 | MtrunA17_Chr6g0471311 | 26.232 | 568 | 355 | 16 | 24 | 549 | 2 | 547 | 1.11e-34 | 137 |
Msa0527260 | MtrunA17_Chr7g0252691 | 23.092 | 524 | 363 | 11 | 68 | 553 | 206 | 727 | 1.00e-33 | 136 |
Msa0527260 | MtrunA17_Chr5g0406681 | 24.803 | 508 | 334 | 16 | 67 | 542 | 67 | 558 | 7.00e-32 | 129 |
Msa0527260 | MtrunA17_Chr8g0377991 | 25.919 | 571 | 301 | 18 | 69 | 528 | 110 | 669 | 1.02e-29 | 124 |
Msa0527260 | MtrunA17_Chr3g0121951 | 26.177 | 531 | 274 | 18 | 69 | 491 | 106 | 626 | 1.80e-28 | 120 |
Msa0527260 | MtrunA17_Chr4g0028451 | 52.336 | 107 | 42 | 1 | 411 | 517 | 10 | 107 | 6.93e-28 | 107 |
Msa0527260 | MtrunA17_Chr2g0292471 | 24.612 | 451 | 302 | 12 | 69 | 485 | 29 | 475 | 1.43e-25 | 110 |
Msa0527260 | MtrunA17_Chr4g0004841 | 29.839 | 248 | 157 | 7 | 317 | 552 | 97 | 339 | 1.96e-25 | 107 |
Msa0527260 | MtrunA17_Chr4g0004101 | 24.390 | 328 | 215 | 8 | 251 | 552 | 10 | 330 | 2.30e-24 | 104 |
Msa0527260 | MtrunA17_Chr1g0205711 | 25.109 | 458 | 256 | 16 | 62 | 466 | 141 | 564 | 1.32e-21 | 99.0 |
Msa0527260 | MtrunA17_Chr1g0160041 | 28.235 | 340 | 176 | 13 | 198 | 475 | 250 | 583 | 1.82e-19 | 92.4 |
Msa0527260 | MtrunA17_Chr4g0033141 | 25.734 | 443 | 268 | 17 | 158 | 552 | 643 | 1072 | 3.71e-19 | 92.0 |
Msa0527260 | MtrunA17_Chr2g0329161 | 24.943 | 441 | 266 | 17 | 158 | 547 | 638 | 1064 | 8.04e-19 | 90.9 |
Msa0527260 | MtrunA17_Chr8g0388081 | 24.850 | 334 | 187 | 12 | 196 | 475 | 160 | 483 | 2.37e-18 | 88.6 |
Msa0527260 | MtrunA17_Chr1g0194371 | 23.340 | 527 | 309 | 20 | 35 | 480 | 36 | 548 | 2.92e-18 | 88.6 |
Msa0527260 | MtrunA17_Chr3g0121931 | 33.503 | 197 | 114 | 5 | 322 | 505 | 454 | 646 | 2.46e-16 | 82.4 |
Msa0527260 | MtrunA17_Chr2g0334121 | 29.442 | 197 | 133 | 3 | 26 | 216 | 12 | 208 | 1.84e-15 | 75.5 |
Msa0527260 | MtrunA17_Chr7g0270221 | 34.756 | 164 | 99 | 6 | 321 | 480 | 349 | 508 | 4.62e-15 | 78.2 |
Msa0527260 | MtrunA17_Chr4g0034181 | 22.626 | 495 | 295 | 19 | 62 | 485 | 72 | 549 | 1.94e-14 | 76.3 |
Msa0527260 | MtrunA17_Chr3g0124631 | 33.735 | 166 | 93 | 7 | 321 | 475 | 426 | 585 | 8.11e-14 | 74.3 |
Msa0527260 | MtrunA17_Chr5g0396691 | 23.030 | 330 | 198 | 10 | 196 | 475 | 221 | 544 | 9.04e-14 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0527260 | AT1G20510.1 | 74.630 | 540 | 134 | 2 | 14 | 551 | 4 | 542 | 0.0 | 828 |
Msa0527260 | AT1G20500.1 | 66.302 | 549 | 170 | 5 | 13 | 553 | 9 | 550 | 0.0 | 738 |
Msa0527260 | AT1G20510.2 | 73.673 | 471 | 121 | 2 | 14 | 482 | 4 | 473 | 0.0 | 711 |
Msa0527260 | AT1G20480.1 | 61.429 | 560 | 202 | 4 | 4 | 553 | 10 | 565 | 0.0 | 708 |
Msa0527260 | AT5G38120.1 | 61.580 | 557 | 193 | 7 | 9 | 553 | 3 | 550 | 0.0 | 693 |
Msa0527260 | AT1G20510.3 | 73.051 | 449 | 118 | 2 | 14 | 460 | 4 | 451 | 0.0 | 675 |
Msa0527260 | AT5G38120.3 | 60.269 | 521 | 186 | 7 | 9 | 517 | 3 | 514 | 0.0 | 635 |
Msa0527260 | AT5G38120.4 | 60.494 | 486 | 171 | 7 | 9 | 482 | 3 | 479 | 0.0 | 590 |
Msa0527260 | AT5G38120.2 | 60.494 | 486 | 171 | 7 | 9 | 482 | 3 | 479 | 0.0 | 590 |
Msa0527260 | AT1G20490.2 | 60.047 | 428 | 154 | 5 | 13 | 430 | 9 | 429 | 1.92e-179 | 513 |
Msa0527260 | AT1G20490.1 | 60.047 | 428 | 154 | 5 | 13 | 430 | 9 | 429 | 1.92e-179 | 513 |
Msa0527260 | AT5G63380.1 | 43.162 | 563 | 286 | 8 | 8 | 549 | 5 | 554 | 2.85e-165 | 481 |
Msa0527260 | AT4G19010.1 | 41.230 | 553 | 301 | 6 | 15 | 553 | 20 | 562 | 6.06e-156 | 457 |
Msa0527260 | AT4G05160.1 | 44.059 | 547 | 291 | 7 | 17 | 553 | 3 | 544 | 1.33e-155 | 456 |
Msa0527260 | AT3G21240.1 | 39.662 | 532 | 312 | 6 | 21 | 545 | 17 | 546 | 3.63e-121 | 368 |
Msa0527260 | AT1G65060.1 | 40.832 | 529 | 298 | 6 | 26 | 545 | 34 | 556 | 1.98e-120 | 367 |
Msa0527260 | AT1G51680.1 | 39.560 | 546 | 316 | 6 | 12 | 545 | 10 | 553 | 8.54e-113 | 347 |
Msa0527260 | AT3G21230.1 | 38.817 | 541 | 310 | 9 | 22 | 545 | 24 | 560 | 4.39e-111 | 343 |
Msa0527260 | AT1G62940.1 | 35.810 | 525 | 328 | 4 | 26 | 545 | 12 | 532 | 7.17e-103 | 320 |
Msa0527260 | AT3G21230.3 | 37.308 | 520 | 301 | 10 | 22 | 524 | 24 | 535 | 6.87e-98 | 308 |
Msa0527260 | AT1G51680.3 | 37.645 | 518 | 309 | 6 | 12 | 517 | 10 | 525 | 8.02e-98 | 307 |
Msa0527260 | AT3G21240.2 | 37.712 | 472 | 285 | 6 | 21 | 485 | 17 | 486 | 1.60e-96 | 302 |
Msa0527260 | AT3G21240.3 | 37.712 | 472 | 285 | 6 | 21 | 485 | 17 | 486 | 1.60e-96 | 302 |
Msa0527260 | AT3G21230.2 | 37.317 | 477 | 278 | 9 | 22 | 481 | 24 | 496 | 8.15e-89 | 283 |
Msa0527260 | AT1G51680.2 | 37.344 | 482 | 288 | 6 | 12 | 481 | 10 | 489 | 3.85e-88 | 281 |
Msa0527260 | AT1G65060.2 | 37.444 | 446 | 264 | 6 | 26 | 462 | 34 | 473 | 1.00e-81 | 264 |
Msa0527260 | AT3G21230.4 | 32.924 | 407 | 252 | 9 | 22 | 411 | 24 | 426 | 3.13e-52 | 184 |
Msa0527260 | AT3G48990.1 | 28.008 | 482 | 335 | 10 | 67 | 543 | 30 | 504 | 1.44e-47 | 174 |
Msa0527260 | AT1G65890.1 | 28.060 | 531 | 317 | 18 | 67 | 549 | 39 | 552 | 1.23e-46 | 172 |
Msa0527260 | AT1G21530.1 | 27.514 | 527 | 323 | 15 | 62 | 549 | 37 | 543 | 3.07e-46 | 171 |
Msa0527260 | AT1G20560.1 | 27.188 | 537 | 348 | 14 | 34 | 542 | 14 | 535 | 5.41e-46 | 170 |
Msa0527260 | AT1G21530.2 | 27.238 | 525 | 329 | 14 | 62 | 549 | 37 | 545 | 1.02e-45 | 169 |
Msa0527260 | AT1G77240.1 | 26.515 | 528 | 338 | 15 | 58 | 551 | 32 | 543 | 3.14e-45 | 167 |
Msa0527260 | AT1G65880.1 | 28.839 | 534 | 310 | 20 | 67 | 549 | 39 | 553 | 3.90e-45 | 168 |
Msa0527260 | AT1G21540.1 | 27.746 | 519 | 323 | 14 | 69 | 551 | 46 | 548 | 1.89e-44 | 166 |
Msa0527260 | AT1G76290.1 | 28.101 | 516 | 318 | 18 | 67 | 549 | 39 | 534 | 2.45e-44 | 165 |
Msa0527260 | AT1G66120.1 | 27.810 | 525 | 323 | 15 | 67 | 551 | 39 | 547 | 6.03e-44 | 164 |
Msa0527260 | AT5G16370.1 | 26.628 | 522 | 326 | 14 | 74 | 553 | 43 | 549 | 2.01e-41 | 157 |
Msa0527260 | AT2G17650.1 | 27.321 | 560 | 343 | 20 | 37 | 549 | 55 | 597 | 3.21e-40 | 154 |
Msa0527260 | AT5G16340.1 | 26.796 | 515 | 321 | 14 | 74 | 547 | 43 | 542 | 1.64e-39 | 152 |
Msa0527260 | AT1G20560.2 | 27.692 | 455 | 292 | 12 | 116 | 542 | 12 | 457 | 3.46e-39 | 149 |
Msa0527260 | AT1G30520.2 | 27.155 | 464 | 292 | 11 | 64 | 496 | 34 | 482 | 8.14e-38 | 147 |
Msa0527260 | AT1G30520.1 | 27.155 | 464 | 292 | 11 | 64 | 496 | 34 | 482 | 8.14e-38 | 147 |
Msa0527260 | AT1G75960.1 | 26.488 | 521 | 324 | 14 | 68 | 549 | 41 | 541 | 8.88e-37 | 144 |
Msa0527260 | AT1G68270.1 | 24.952 | 521 | 308 | 16 | 67 | 545 | 39 | 518 | 2.44e-33 | 134 |
Msa0527260 | AT3G16170.1 | 24.672 | 381 | 245 | 9 | 197 | 547 | 234 | 602 | 3.27e-32 | 131 |
Msa0527260 | AT5G36880.6 | 22.761 | 536 | 362 | 13 | 60 | 553 | 144 | 669 | 3.33e-32 | 132 |
Msa0527260 | AT5G36880.3 | 22.761 | 536 | 362 | 13 | 60 | 553 | 144 | 669 | 3.33e-32 | 132 |
Msa0527260 | AT5G36880.5 | 22.761 | 536 | 362 | 13 | 60 | 553 | 144 | 669 | 3.33e-32 | 132 |
Msa0527260 | AT5G36880.1 | 22.761 | 536 | 362 | 13 | 60 | 553 | 144 | 669 | 3.33e-32 | 132 |
Msa0527260 | AT5G36880.2 | 22.948 | 536 | 361 | 14 | 60 | 553 | 194 | 719 | 4.57e-32 | 131 |
Msa0527260 | AT3G16910.1 | 23.654 | 520 | 344 | 16 | 67 | 545 | 47 | 554 | 1.02e-31 | 129 |
Msa0527260 | AT1G30520.3 | 25.843 | 445 | 281 | 12 | 64 | 477 | 34 | 460 | 1.51e-30 | 125 |
Msa0527260 | AT1G30520.4 | 25.843 | 445 | 281 | 12 | 64 | 477 | 34 | 460 | 1.51e-30 | 125 |
Msa0527260 | AT5G36880.4 | 21.957 | 460 | 312 | 11 | 60 | 481 | 144 | 594 | 3.63e-25 | 110 |
Msa0527260 | AT5G27600.1 | 27.760 | 317 | 172 | 9 | 197 | 466 | 261 | 567 | 2.11e-22 | 102 |
Msa0527260 | AT3G05970.1 | 28.707 | 317 | 169 | 9 | 197 | 466 | 261 | 567 | 5.36e-20 | 94.4 |
Msa0527260 | AT1G64400.1 | 22.515 | 493 | 303 | 19 | 55 | 478 | 65 | 547 | 1.59e-19 | 92.8 |
Msa0527260 | AT1G77590.2 | 27.874 | 348 | 167 | 14 | 198 | 475 | 100 | 433 | 2.91e-19 | 91.7 |
Msa0527260 | AT1G77590.1 | 27.874 | 348 | 167 | 14 | 198 | 475 | 246 | 579 | 5.46e-19 | 91.3 |
Msa0527260 | AT2G47240.4 | 26.571 | 350 | 200 | 12 | 180 | 480 | 147 | 488 | 6.43e-19 | 90.9 |
Msa0527260 | AT2G47240.1 | 26.571 | 350 | 200 | 12 | 180 | 480 | 206 | 547 | 7.21e-19 | 90.9 |
Msa0527260 | AT2G47240.2 | 26.571 | 350 | 200 | 12 | 180 | 480 | 206 | 547 | 7.21e-19 | 90.9 |
Msa0527260 | AT2G47240.3 | 26.571 | 350 | 200 | 12 | 180 | 480 | 206 | 547 | 7.21e-19 | 90.9 |
Msa0527260 | AT1G49430.1 | 25.000 | 344 | 199 | 13 | 193 | 485 | 219 | 554 | 1.02e-16 | 84.0 |
Msa0527260 | AT4G11030.1 | 23.548 | 310 | 174 | 10 | 198 | 454 | 224 | 523 | 7.10e-15 | 78.2 |
Msa0527260 | AT3G23790.1 | 32.632 | 190 | 103 | 6 | 322 | 490 | 455 | 640 | 4.15e-13 | 72.8 |
Msa0527260 | AT3G23790.1 | 24.797 | 246 | 152 | 9 | 68 | 282 | 111 | 354 | 2.55e-12 | 70.1 |
Msa0527260 | AT4G14070.1 | 29.600 | 250 | 145 | 8 | 322 | 546 | 471 | 714 | 5.64e-12 | 68.9 |
Find 179 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTGCCCAGCCTCCTTATT+TGG | 0.136723 | 3_4:-81587722 | None:intergenic |
TCGCTTCATACGGTGGTTTC+TGG | 0.138183 | 3_4:+81585914 | Msa0527260:CDS |
TGATAGGTTTCTATCGAATT+TGG | 0.177748 | 3_4:+81588064 | Msa0527260:three_prime_UTR |
CTGCTGCAAAACCCACTTCT+TGG | 0.251921 | 3_4:-81585011 | None:intergenic |
GTTGGAGTCAAAAGAGAAAA+AGG | 0.268019 | 3_4:+81584793 | None:intergenic |
ACCACTTGTGCCGCCGATAC+TGG | 0.271545 | 3_4:+81585841 | Msa0527260:CDS |
GTAAGTATCTTTCAAGGTTA+TGG | 0.275288 | 3_4:+81585992 | Msa0527260:CDS |
TGGAGCTTCTACTGAGTCTT+TGG | 0.282200 | 3_4:+81586036 | Msa0527260:CDS |
TTCTATCGAATTTGGTTAGA+TGG | 0.317747 | 3_4:+81588072 | Msa0527260:three_prime_UTR |
TTGTGTAGTATCTATCAAAC+TGG | 0.323309 | 3_4:-81584911 | None:intergenic |
TGTTGTTGATGATGAGTTGC+TGG | 0.335506 | 3_4:-81585468 | None:intergenic |
GTTCCGATGTTTCATATATA+CGG | 0.342157 | 3_4:+81585704 | Msa0527260:CDS |
TGCTATGGGGCTTCTTGCTA+TGG | 0.342915 | 3_4:+81585739 | Msa0527260:CDS |
TTAACTGAATCCTCTGGAAT+TGG | 0.351281 | 3_4:+81586016 | Msa0527260:CDS |
AGAATTGTCACATCACAAAT+TGG | 0.354196 | 3_4:-81588451 | None:intergenic |
AGCTCACCAGTCCGATTAAC+TGG | 0.354985 | 3_4:-81586145 | None:intergenic |
CTCTACTCATCAGGAACAAC+TGG | 0.359656 | 3_4:+81585572 | Msa0527260:CDS |
GCAGACAACAGGGAAGTAAA+TGG | 0.362942 | 3_4:-81585270 | None:intergenic |
TAGTTAATTAACTAAAGTTT+AGG | 0.372221 | 3_4:+81588421 | Msa0527260:three_prime_UTR |
CAAGTTGTAATGGCTAGATT+TGG | 0.372468 | 3_4:+81585644 | Msa0527260:CDS |
GGAGGATGACGTCACCTTTA+CGG | 0.372564 | 3_4:-81585232 | None:intergenic |
TTATATCAGGTATCCAAATA+AGG | 0.373402 | 3_4:+81587709 | Msa0527260:intron |
CATTAAGTACAAGGGATATC+AGG | 0.379179 | 3_4:+81587291 | Msa0527260:CDS |
AAGGGAAGCAGGAAGCATTC+AGG | 0.399635 | 3_4:-81588160 | None:intergenic |
GGTGAATTGGTGGCCGGTGG+AGG | 0.402061 | 3_4:-81585150 | None:intergenic |
ATGACGGAGAGGCAGACAAC+AGG | 0.402334 | 3_4:-81585281 | None:intergenic |
AAGGCTGGAAGTAGCTTGTC+AGG | 0.410549 | 3_4:+81587767 | Msa0527260:CDS |
TTAATCGGACTGGTGAGCTT+TGG | 0.414553 | 3_4:+81586149 | Msa0527260:CDS |
TGGAGTTGGGAGAGAGGAGG+AGG | 0.417129 | 3_4:-81585250 | None:intergenic |
GAATTTAGAGAGAACAACTA+TGG | 0.419281 | 3_4:-81585768 | None:intergenic |
AAGAAACGAACCTTTCATAA+TGG | 0.419398 | 3_4:-81586185 | None:intergenic |
AGTAAATGGAGTTGGGAGAG+AGG | 0.420482 | 3_4:-81585256 | None:intergenic |
TTTGTGACAAAATAAAGAAA+TGG | 0.421519 | 3_4:-81588108 | None:intergenic |
TGGTTTGGTGGAAGTGGAAG+GGG | 0.421746 | 3_4:-81585062 | None:intergenic |
ACTGGTGAGCTTTGGCTTCG+TGG | 0.421933 | 3_4:+81586157 | Msa0527260:CDS |
AGTGAAAGCAAGAACAGGTT+TGG | 0.423538 | 3_4:-81585378 | None:intergenic |
ATCCATCTGGTAAAATTCTT+CGG | 0.423771 | 3_4:+81587986 | Msa0527260:CDS |
AAAGAGTGGTTTGGTGGAAG+TGG | 0.424298 | 3_4:-81585068 | None:intergenic |
CCTTGAAAGATACTTACATT+AGG | 0.428705 | 3_4:-81585986 | None:intergenic |
AGAGATTAAGATTAAGAAGA+TGG | 0.429051 | 3_4:+81584947 | Msa0527260:exon |
TCCAAATAAGGAGGCTGGGC+AGG | 0.431867 | 3_4:+81587721 | Msa0527260:CDS |
CCTAATGTAAGTATCTTTCA+AGG | 0.432845 | 3_4:+81585986 | Msa0527260:CDS |
CTCAGCCGTTACCAGTTAAT+CGG | 0.436385 | 3_4:+81586134 | Msa0527260:CDS |
GGTCTTGCAGTGTTTGCTAT+GGG | 0.437424 | 3_4:+81585725 | Msa0527260:CDS |
CGGTCTTGCAGTGTTTGCTA+TGG | 0.438320 | 3_4:+81585724 | Msa0527260:CDS |
GCTATGGGGCTTCTTGCTAT+GGG | 0.440856 | 3_4:+81585740 | Msa0527260:CDS |
CTACAGCACGCCAGAGTTGT+TGG | 0.441513 | 3_4:-81585175 | None:intergenic |
CTTGTCAGGAAGCCAAGTTA+TGG | 0.458124 | 3_4:+81587781 | Msa0527260:CDS |
TTGGAAGAGAGTCGTAAGTA+TGG | 0.463115 | 3_4:+81586055 | Msa0527260:CDS |
AGGCGTCAATGAAGGCGATA+TGG | 0.463838 | 3_4:-81585130 | None:intergenic |
GGGGCTTGTGTCTGCTTCCA+CGG | 0.471317 | 3_4:+81586084 | Msa0527260:CDS |
TATGGTTTAACTGAATCCTC+TGG | 0.471540 | 3_4:+81586010 | Msa0527260:CDS |
GTGGTTTGGTGGAAGTGGAA+GGG | 0.473586 | 3_4:-81585063 | None:intergenic |
AGAGTTGTTGGTAGGTGAAT+TGG | 0.474858 | 3_4:-81585163 | None:intergenic |
AGGTATCCAAATAAGGAGGC+TGG | 0.481674 | 3_4:+81587716 | Msa0527260:intron |
TTCACTTCCAATCATTCTCA+TGG | 0.482486 | 3_4:+81585439 | Msa0527260:CDS |
TAACCAACCCTCTGGAGTAA+TGG | 0.484888 | 3_4:-81587200 | None:intergenic |
CGATTTCGCGAGATGTATTG+AGG | 0.485277 | 3_4:-81585337 | None:intergenic |
GCGAGATGTATTGAGGGGAT+TGG | 0.486320 | 3_4:-81585330 | None:intergenic |
AACAAAGCCTCTAGTTCTGC+TGG | 0.486762 | 3_4:-81587502 | None:intergenic |
CACTTCCTCACTCTCCAACA+TGG | 0.488973 | 3_4:+81585205 | Msa0527260:CDS |
GCCGGTGGAGGCGTCAATGA+AGG | 0.490250 | 3_4:-81585138 | None:intergenic |
AGTGGTTTGGTGGAAGTGGA+AGG | 0.490859 | 3_4:-81585064 | None:intergenic |
GCATATGTGGTAAGGAAGGC+TGG | 0.491572 | 3_4:+81587752 | Msa0527260:CDS |
TTATTCTCTATAAGGGAAGC+AGG | 0.492146 | 3_4:-81588171 | None:intergenic |
ATTAAGAAGATGGAGGTAAA+CGG | 0.492454 | 3_4:+81584957 | Msa0527260:exon |
TGTATTGAGGGGATTGGTGG+TGG | 0.493354 | 3_4:-81585324 | None:intergenic |
CGATGGATTCTTATTTGTCG+TGG | 0.494381 | 3_4:+81587252 | Msa0527260:CDS |
GTGGTGTCCATGAGAATGAT+TGG | 0.496058 | 3_4:-81585446 | None:intergenic |
AACAGGGAAGTAAATGGAGT+TGG | 0.497843 | 3_4:-81585264 | None:intergenic |
AAGGTAGTAAATAAATAATG+AGG | 0.498509 | 3_4:+81584812 | Msa0527260:five_prime_UTR |
CTGCAACAAAATCCATAACT+TGG | 0.502133 | 3_4:-81587793 | None:intergenic |
TGATTTGAGTTCGCTTCATA+CGG | 0.505643 | 3_4:+81585904 | Msa0527260:CDS |
TTGGTAGGTGAATTGGTGGC+CGG | 0.506146 | 3_4:-81585156 | None:intergenic |
GCCACACTACTCTACTCATC+AGG | 0.506955 | 3_4:+81585563 | Msa0527260:CDS |
AGTCGTAAGTATGGTACGGC+GGG | 0.509532 | 3_4:+81586064 | Msa0527260:CDS |
CGGCGGCACAAGTGGTAAGA+AGG | 0.513016 | 3_4:-81585834 | None:intergenic |
CATCGCTATGAGATTCTTGT+GGG | 0.513470 | 3_4:-81585618 | None:intergenic |
GCCTTCATTGACGCCTCCAC+CGG | 0.515250 | 3_4:+81585137 | Msa0527260:CDS |
GAGTGAATGAATGATGATAT+TGG | 0.515321 | 3_4:+81584853 | Msa0527260:five_prime_UTR |
TGGAAGTGAAGGTGATGCTT+GGG | 0.520153 | 3_4:-81585426 | None:intergenic |
GGAGTAGTGAAAGCAAGAAC+AGG | 0.520555 | 3_4:-81585383 | None:intergenic |
GAAGATACTACTCCTTTGCT+TGG | 0.520592 | 3_4:-81585596 | None:intergenic |
ACTTCCTCACTCTCCAACAT+GGG | 0.520727 | 3_4:+81585206 | Msa0527260:CDS |
TGCCTCTCCGTCATGTCCCT+CGG | 0.521898 | 3_4:+81585290 | Msa0527260:CDS |
TTCCTTACCACATATGCCAT+TGG | 0.522529 | 3_4:-81587746 | None:intergenic |
AGCGATGGTTCAAGTTGTAA+TGG | 0.525827 | 3_4:+81585634 | Msa0527260:CDS |
ACAGGGAAGTAAATGGAGTT+GGG | 0.526332 | 3_4:-81585263 | None:intergenic |
AGGTAGTAAATAAATAATGA+GGG | 0.527522 | 3_4:+81584813 | Msa0527260:five_prime_UTR |
TCCGTTACTTCTTTACTCAA+AGG | 0.528090 | 3_4:-81585944 | None:intergenic |
TTAACTAAAGTTTAGGCATG+AGG | 0.532817 | 3_4:+81588428 | Msa0527260:three_prime_UTR |
GTTTGCTATATTGATAGCGA+TGG | 0.538596 | 3_4:+81587235 | Msa0527260:CDS |
TTGGAAGTGAAGGTGATGCT+TGG | 0.539417 | 3_4:-81585427 | None:intergenic |
ATACAAAAGAATTCGAAAAG+TGG | 0.543360 | 3_4:+81587939 | Msa0527260:CDS |
TTCCAATGGCATATGTGGTA+AGG | 0.544112 | 3_4:+81587744 | Msa0527260:CDS |
CTTCATACGGTGGTTTCTGG+TGG | 0.547015 | 3_4:+81585917 | Msa0527260:CDS |
ATCTGGTAAAATTCTTCGGA+AGG | 0.547613 | 3_4:+81587990 | Msa0527260:CDS |
GGAGGCTGGGCAGGTTCCAA+TGG | 0.547827 | 3_4:+81587730 | Msa0527260:CDS |
ACAGCAGCGTCTACAATAGC+AGG | 0.550475 | 3_4:-81587535 | None:intergenic |
GTAGGTGAATTGGTGGCCGG+TGG | 0.552038 | 3_4:-81585153 | None:intergenic |
ACCTTTACGGATCCCCATGT+TGG | 0.552224 | 3_4:-81585219 | None:intergenic |
GAAAGAGCTCATTAAGTACA+AGG | 0.552506 | 3_4:+81587282 | Msa0527260:CDS |
GCATCTAAAGAGTGGTTTGG+TGG | 0.553390 | 3_4:-81585074 | None:intergenic |
CGTGGTCCCACCATTATGAA+AGG | 0.554145 | 3_4:+81586175 | Msa0527260:CDS |
TCCAACATGGGGATCCGTAA+AGG | 0.554642 | 3_4:+81585218 | Msa0527260:CDS |
GCAGGTTCCAATGGCATATG+TGG | 0.556198 | 3_4:+81587739 | Msa0527260:CDS |
ACCAGTATCGGCGGCACAAG+TGG | 0.558595 | 3_4:-81585842 | None:intergenic |
AAACGAACCTTTCATAATGG+TGG | 0.559397 | 3_4:-81586182 | None:intergenic |
TTCAGCATAGCAACCAGTAT+CGG | 0.561145 | 3_4:-81585854 | None:intergenic |
CCAGTCCGATTAACTGGTAA+CGG | 0.565679 | 3_4:-81586139 | None:intergenic |
GGTATCCAAATAAGGAGGCT+GGG | 0.569081 | 3_4:+81587717 | Msa0527260:intron |
CCATCGCTATGAGATTCTTG+TGG | 0.569419 | 3_4:-81585619 | None:intergenic |
GTGGCATCTAAAGAGTGGTT+TGG | 0.570177 | 3_4:-81585077 | None:intergenic |
CCGTTACCAGTTAATCGGAC+TGG | 0.573347 | 3_4:+81586139 | Msa0527260:CDS |
TTGAGTAAAGAAGTAACGGA+AGG | 0.574145 | 3_4:+81585947 | Msa0527260:CDS |
AGATGTATTGAGGGGATTGG+TGG | 0.576476 | 3_4:-81585327 | None:intergenic |
ATCTCCTCCCGCGCTCATCA+CGG | 0.577531 | 3_4:+81585107 | Msa0527260:CDS |
GATTAAGATTAAGAAGATGG+AGG | 0.581479 | 3_4:+81584950 | Msa0527260:exon |
GAAGCATTCAGGAATGCAGC+AGG | 0.582823 | 3_4:-81588149 | None:intergenic |
TCCTTTGAGTAAAGAAGTAA+CGG | 0.584099 | 3_4:+81585943 | Msa0527260:CDS |
GATTTCGCGAGATGTATTGA+GGG | 0.584385 | 3_4:-81585336 | None:intergenic |
AATTCACCTACCAACAACTC+TGG | 0.585675 | 3_4:+81585165 | Msa0527260:CDS |
AACGAACCTTTCATAATGGT+GGG | 0.587290 | 3_4:-81586181 | None:intergenic |
GATATGGCCGTGATGAGCGC+GGG | 0.587698 | 3_4:-81585114 | None:intergenic |
AAATGGAGTTGGGAGAGAGG+AGG | 0.592217 | 3_4:-81585253 | None:intergenic |
TGAGTAAAGAAGTAACGGAA+GGG | 0.592240 | 3_4:+81585948 | Msa0527260:CDS |
GTAGTAAATAAATAATGAGG+GGG | 0.595227 | 3_4:+81584815 | Msa0527260:five_prime_UTR |
GTTGTTGGTAGGTGAATTGG+TGG | 0.596032 | 3_4:-81585160 | None:intergenic |
AATGGCATATGTGGTAAGGA+AGG | 0.598196 | 3_4:+81587748 | Msa0527260:CDS |
GTCTTGCAGTGTTTGCTATG+GGG | 0.598502 | 3_4:+81585726 | Msa0527260:CDS |
CGATATGGCCGTGATGAGCG+CGG | 0.598855 | 3_4:-81585115 | None:intergenic |
TGACGGAGAGGCAGACAACA+GGG | 0.598859 | 3_4:-81585280 | None:intergenic |
GTTGGAGAGTGAGGAAGTGA+CGG | 0.598886 | 3_4:-81585201 | None:intergenic |
CGACCATTACTCCAGAGGGT+TGG | 0.603546 | 3_4:+81587197 | Msa0527260:CDS |
GATAGCGCCGAGGGACATGA+CGG | 0.604148 | 3_4:-81585297 | None:intergenic |
AGAGTGATCGATCCAAGAAG+TGG | 0.604701 | 3_4:+81584999 | Msa0527260:CDS |
AGTGACTGAGCGCATCAACC+AGG | 0.608319 | 3_4:+81585532 | Msa0527260:CDS |
TGTTGATGATGAGTTGCTGG+TGG | 0.609037 | 3_4:-81585465 | None:intergenic |
ATGGCCGTGATGAGCGCGGG+AGG | 0.610511 | 3_4:-81585111 | None:intergenic |
CCACAAGAATCTCATAGCGA+TGG | 0.611191 | 3_4:+81585619 | Msa0527260:CDS |
GGTCCCTCCAGCAGAACTAG+AGG | 0.614140 | 3_4:+81587495 | Msa0527260:intron |
TTTGAGTTCGCTTCATACGG+TGG | 0.616174 | 3_4:+81585907 | Msa0527260:CDS |
GATCCCCATGTTGGAGAGTG+AGG | 0.617341 | 3_4:-81585210 | None:intergenic |
GGTGGTGATGATAGCGCCGA+GGG | 0.619275 | 3_4:-81585306 | None:intergenic |
AGAGAGTCGTAAGTATGGTA+CGG | 0.623595 | 3_4:+81586060 | Msa0527260:CDS |
AGCGCGGGAGGAGATGAAAG+TGG | 0.628660 | 3_4:-81585099 | None:intergenic |
GGTAGTAAATAAATAATGAG+GGG | 0.629942 | 3_4:+81584814 | Msa0527260:five_prime_UTR |
TGTGTAGTATCTATCAAACT+GGG | 0.632023 | 3_4:-81584910 | None:intergenic |
GGAACAACTGGACCAAGCAA+AGG | 0.634924 | 3_4:+81585584 | Msa0527260:CDS |
TCAGTCACTCTACTCAACTC+AGG | 0.638010 | 3_4:-81585518 | None:intergenic |
GTAGTGTGGCTGTATCATCC+TGG | 0.639019 | 3_4:-81585550 | None:intergenic |
ATGAGAATGATTGGAAGTGA+AGG | 0.639263 | 3_4:-81585437 | None:intergenic |
AAAGCCTCTAGTTCTGCTGG+AGG | 0.643862 | 3_4:-81587499 | None:intergenic |
AGCATAGCAACCAGTATCGG+CGG | 0.644393 | 3_4:-81585851 | None:intergenic |
GGCAGGTTATTTCAGTAACG+AGG | 0.647450 | 3_4:+81587162 | Msa0527260:intron |
ACATCGACCATTACTCCAGA+GGG | 0.647619 | 3_4:+81587193 | Msa0527260:CDS |
AAAGAGCTCATTAAGTACAA+GGG | 0.651964 | 3_4:+81587283 | Msa0527260:CDS |
GAGTGATCGATCCAAGAAGT+GGG | 0.652473 | 3_4:+81585000 | Msa0527260:CDS |
AGACCGTATATATGAAACAT+CGG | 0.653796 | 3_4:-81585707 | None:intergenic |
GCTTGTGTCTGCTTCCACGG+AGG | 0.655096 | 3_4:+81586087 | Msa0527260:CDS |
CTCTGGAGTAATGGTCGATG+TGG | 0.656546 | 3_4:-81587191 | None:intergenic |
AAGCCTCTAGTTCTGCTGGA+GGG | 0.656701 | 3_4:-81587498 | None:intergenic |
TAGTAAATAAATAATGAGGG+GGG | 0.661298 | 3_4:+81584816 | Msa0527260:five_prime_UTR |
ATTTCGCGAGATGTATTGAG+GGG | 0.663874 | 3_4:-81585335 | None:intergenic |
CTTCCTCACTCTCCAACATG+GGG | 0.667378 | 3_4:+81585207 | Msa0527260:CDS |
GCGGGAGGAGATGAAAGTGG+TGG | 0.667975 | 3_4:-81585096 | None:intergenic |
AGGTTATTTCAGTAACGAGG+AGG | 0.670840 | 3_4:+81587165 | Msa0527260:intron |
CGCCGAGGGACATGACGGAG+AGG | 0.671164 | 3_4:-81585292 | None:intergenic |
AAGTGGTGGCATCTAAAGAG+TGG | 0.673146 | 3_4:-81585082 | None:intergenic |
TATCAGGTATCCAAATAAGG+AGG | 0.676684 | 3_4:+81587712 | Msa0527260:intron |
CACATCGACCATTACTCCAG+AGG | 0.683319 | 3_4:+81587192 | Msa0527260:CDS |
TCCTGATGAGTAGAGTAGTG+TGG | 0.691172 | 3_4:-81585564 | None:intergenic |
GTCGTAAGTATGGTACGGCG+GGG | 0.691371 | 3_4:+81586065 | Msa0527260:CDS |
AGCACGCCAGAGTTGTTGGT+AGG | 0.696936 | 3_4:-81585171 | None:intergenic |
AGTAGAAGCTCCAATTCCAG+AGG | 0.697004 | 3_4:-81586026 | None:intergenic |
TGGTGGTGATGATAGCGCCG+AGG | 0.700534 | 3_4:-81585307 | None:intergenic |
GTCAACAATCATAGCCTCCG+TGG | 0.700669 | 3_4:-81586101 | None:intergenic |
GAGTCGTAAGTATGGTACGG+CGG | 0.704214 | 3_4:+81586063 | Msa0527260:CDS |
TGAATGATGATATTGGACGA+CGG | 0.752090 | 3_4:+81584860 | Msa0527260:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTTAATTAATTAAAAA+AGG | - | chr3_4:81586343-81586362 | None:intergenic | 0.0% |
!!! | AAGCAAATATTATTTTTTTT+AGG | + | chr3_4:81588268-81588287 | Msa0527260:three_prime_UTR | 10.0% |
!!! | AATATTATTTTTTTTAGGTT+TGG | + | chr3_4:81588273-81588292 | Msa0527260:three_prime_UTR | 10.0% |
!! | GAAAAAAATTAAAGTTGTAT+TGG | - | chr3_4:81586545-81586564 | None:intergenic | 15.0% |
!! | ATTAATTTATATTCTTTGGT+AGG | - | chr3_4:81587572-81587591 | None:intergenic | 15.0% |
!!! | AATTTTTTTCAATATATAGG+TGG | + | chr3_4:81587912-81587931 | Msa0527260:intron | 15.0% |
!!! | AACATTTTTATTCTCTATAA+GGG | - | chr3_4:81588181-81588200 | None:intergenic | 15.0% |
!!! | TCAATTTTAGCAATATTATA+CGG | - | chr3_4:81588336-81588355 | None:intergenic | 15.0% |
!! | TAGTTAATTAACTAAAGTTT+AGG | + | chr3_4:81588421-81588440 | Msa0527260:three_prime_UTR | 15.0% |
!! | AAGGTAGTAAATAAATAATG+AGG | + | chr3_4:81584812-81584831 | Msa0527260:five_prime_UTR | 20.0% |
!! | AGGTAGTAAATAAATAATGA+GGG | + | chr3_4:81584813-81584832 | Msa0527260:five_prime_UTR | 20.0% |
!! | ATAAACAATTCAGATTAGAT+TGG | + | chr3_4:81586270-81586289 | Msa0527260:intron | 20.0% |
!! | TAATTAAAATATTGAACACG+AGG | + | chr3_4:81586351-81586370 | Msa0527260:intron | 20.0% |
!!! | TGTCTTTTTCTAATAAAGTA+AGG | + | chr3_4:81586621-81586640 | Msa0527260:intron | 20.0% |
!! | AAATGGAATGAAATAATCAT+TGG | - | chr3_4:81586670-81586689 | None:intergenic | 20.0% |
!!! | ATCGATATTCTAAAAAATGT+GGG | - | chr3_4:81586780-81586799 | None:intergenic | 20.0% |
!!! | TATCGATATTCTAAAAAATG+TGG | - | chr3_4:81586781-81586800 | None:intergenic | 20.0% |
!! | AGTAAAATGTCAAAATTGTT+AGG | - | chr3_4:81586875-81586894 | None:intergenic | 20.0% |
!!! | GTTACTTTTTTTATGTCTAA+TGG | - | chr3_4:81586974-81586993 | None:intergenic | 20.0% |
!!! | TTTTGTGTGTATATTATATC+AGG | + | chr3_4:81587696-81587715 | Msa0527260:intron | 20.0% |
!! | TTTGTGACAAAATAAAGAAA+TGG | - | chr3_4:81588111-81588130 | None:intergenic | 20.0% |
!!! | CAACATTTTTATTCTCTATA+AGG | - | chr3_4:81588182-81588201 | None:intergenic | 20.0% |
!! | TATAGAGAATAAAAATGTTG+TGG | + | chr3_4:81588182-81588201 | Msa0527260:three_prime_UTR | 20.0% |
! | GGTAGTAAATAAATAATGAG+GGG | + | chr3_4:81584814-81584833 | Msa0527260:five_prime_UTR | 25.0% |
! | GTAGTAAATAAATAATGAGG+GGG | + | chr3_4:81584815-81584834 | Msa0527260:five_prime_UTR | 25.0% |
! | TAGTAAATAAATAATGAGGG+GGG | + | chr3_4:81584816-81584835 | Msa0527260:five_prime_UTR | 25.0% |
! | AGAGATTAAGATTAAGAAGA+TGG | + | chr3_4:81584947-81584966 | Msa0527260:exon | 25.0% |
! | AATTATAGCATATAAACTCG+TGG | - | chr3_4:81586319-81586338 | None:intergenic | 25.0% |
! | TTATTACAAACTCACACAAA+TGG | + | chr3_4:81586819-81586838 | Msa0527260:intron | 25.0% |
!! | TTTTAGTGTTATAAACACCT+TGG | - | chr3_4:81587021-81587040 | None:intergenic | 25.0% |
! | CACTAAAATAATAGATGCAA+AGG | + | chr3_4:81587033-81587052 | Msa0527260:intron | 25.0% |
! | ATATAAGCTCACATAATTGT+TGG | + | chr3_4:81587095-81587114 | Msa0527260:intron | 25.0% |
!!! | CATAATTGTTGGTTCTATTA+TGG | + | chr3_4:81587106-81587125 | Msa0527260:intron | 25.0% |
! | GTAAACAGTAATTTATCTCT+GGG | - | chr3_4:81587387-81587406 | None:intergenic | 25.0% |
! | TCTTTATTACTATTGTGTGT+CGG | - | chr3_4:81587409-81587428 | None:intergenic | 25.0% |
!! | TGTTTTATGGTTATTGTTAC+AGG | + | chr3_4:81587474-81587493 | Msa0527260:intron | 25.0% |
! | TTATATCAGGTATCCAAATA+AGG | + | chr3_4:81587709-81587728 | Msa0527260:intron | 25.0% |
!!! | ACTCTTTTTTATTAGATGCT+TGG | + | chr3_4:81587854-81587873 | Msa0527260:intron | 25.0% |
!!! | CTCTTTTTTATTAGATGCTT+GGG | + | chr3_4:81587855-81587874 | Msa0527260:intron | 25.0% |
!! | ACTTTTCGAATTCTTTTGTA+TGG | - | chr3_4:81587940-81587959 | None:intergenic | 25.0% |
! | ATACAAAAGAATTCGAAAAG+TGG | + | chr3_4:81587939-81587958 | Msa0527260:CDS | 25.0% |
!!! | ATTTTACCAGATGGATTTTT+GGG | - | chr3_4:81587982-81588001 | None:intergenic | 25.0% |
!!! | AATTTTACCAGATGGATTTT+TGG | - | chr3_4:81587983-81588002 | None:intergenic | 25.0% |
!! | CAGTTGAACTTTTAAATGAT+AGG | + | chr3_4:81588048-81588067 | Msa0527260:three_prime_UTR | 25.0% |
GAGTGAATGAATGATGATAT+TGG | + | chr3_4:81584853-81584872 | Msa0527260:five_prime_UTR | 30.0% | |
TGTGTAGTATCTATCAAACT+GGG | - | chr3_4:81584913-81584932 | None:intergenic | 30.0% | |
TTGTGTAGTATCTATCAAAC+TGG | - | chr3_4:81584914-81584933 | None:intergenic | 30.0% | |
GATTAAGATTAAGAAGATGG+AGG | + | chr3_4:81584950-81584969 | Msa0527260:exon | 30.0% | |
ATTAAGAAGATGGAGGTAAA+CGG | + | chr3_4:81584957-81584976 | Msa0527260:exon | 30.0% | |
GTTCCGATGTTTCATATATA+CGG | + | chr3_4:81585704-81585723 | Msa0527260:CDS | 30.0% | |
AGACCGTATATATGAAACAT+CGG | - | chr3_4:81585710-81585729 | None:intergenic | 30.0% | |
GAATTTAGAGAGAACAACTA+TGG | - | chr3_4:81585771-81585790 | None:intergenic | 30.0% | |
TCCTTTGAGTAAAGAAGTAA+CGG | + | chr3_4:81585943-81585962 | Msa0527260:CDS | 30.0% | |
CCTTGAAAGATACTTACATT+AGG | - | chr3_4:81585989-81586008 | None:intergenic | 30.0% | |
CCTAATGTAAGTATCTTTCA+AGG | + | chr3_4:81585986-81586005 | Msa0527260:CDS | 30.0% | |
GTAAGTATCTTTCAAGGTTA+TGG | + | chr3_4:81585992-81586011 | Msa0527260:CDS | 30.0% | |
AAGAAACGAACCTTTCATAA+TGG | - | chr3_4:81586188-81586207 | None:intergenic | 30.0% | |
TGAATTGCTAAACAAGTTTC+CGG | - | chr3_4:81586382-81586401 | None:intergenic | 30.0% | |
!! | AAGTGACACTCATTTTGAAA+CGG | - | chr3_4:81586479-81586498 | None:intergenic | 30.0% |
AAACTCACACAAATGGATAT+TGG | + | chr3_4:81586826-81586845 | Msa0527260:intron | 30.0% | |
AACTCACACAAATGGATATT+GGG | + | chr3_4:81586827-81586846 | Msa0527260:intron | 30.0% | |
GCTAATTAAAATGCAAGACA+TGG | + | chr3_4:81587131-81587150 | Msa0527260:intron | 30.0% | |
ATTAAAATGCAAGACATGGT+TGG | + | chr3_4:81587135-81587154 | Msa0527260:intron | 30.0% | |
AAAGAGCTCATTAAGTACAA+GGG | + | chr3_4:81587283-81587302 | Msa0527260:CDS | 30.0% | |
GGTAAACAGTAATTTATCTC+TGG | - | chr3_4:81587388-81587407 | None:intergenic | 30.0% | |
CGTAAATATTGTCAAACTCA+TGG | + | chr3_4:81587436-81587455 | Msa0527260:intron | 30.0% | |
!!! | GTTCTCTTGCTTTTGTTTTA+TGG | + | chr3_4:81587461-81587480 | Msa0527260:intron | 30.0% |
TATATTCTTTGGTAGGCTTA+CGG | - | chr3_4:81587565-81587584 | None:intergenic | 30.0% | |
TGATTGATAAGAAGGAATAC+TGG | - | chr3_4:81587663-81587682 | None:intergenic | 30.0% | |
TATACACACAAAACATTCAG+CGG | - | chr3_4:81587689-81587708 | None:intergenic | 30.0% | |
ATCCATCTGGTAAAATTCTT+CGG | + | chr3_4:81587986-81588005 | Msa0527260:CDS | 30.0% | |
TGATAGGTTTCTATCGAATT+TGG | + | chr3_4:81588064-81588083 | Msa0527260:three_prime_UTR | 30.0% | |
TTCTATCGAATTTGGTTAGA+TGG | + | chr3_4:81588072-81588091 | Msa0527260:three_prime_UTR | 30.0% | |
GAATAAAAATGTTGTGGTCT+TGG | + | chr3_4:81588188-81588207 | Msa0527260:three_prime_UTR | 30.0% | |
TTAACTAAAGTTTAGGCATG+AGG | + | chr3_4:81588428-81588447 | Msa0527260:three_prime_UTR | 30.0% | |
AGAATTGTCACATCACAAAT+TGG | - | chr3_4:81588454-81588473 | None:intergenic | 30.0% | |
TGAATGATGATATTGGACGA+CGG | + | chr3_4:81584860-81584879 | Msa0527260:five_prime_UTR | 35.0% | |
!! | GTGATTTTAGAAAGGAGTTG+TGG | - | chr3_4:81585407-81585426 | None:intergenic | 35.0% |
!! | ATGCTTGGGTGATTTTAGAA+AGG | - | chr3_4:81585415-81585434 | None:intergenic | 35.0% |
ATGAGAATGATTGGAAGTGA+AGG | - | chr3_4:81585440-81585459 | None:intergenic | 35.0% | |
TTCACTTCCAATCATTCTCA+TGG | + | chr3_4:81585439-81585458 | Msa0527260:CDS | 35.0% | |
CAAGTTGTAATGGCTAGATT+TGG | + | chr3_4:81585644-81585663 | Msa0527260:CDS | 35.0% | |
! | TGATTTGAGTTCGCTTCATA+CGG | + | chr3_4:81585904-81585923 | Msa0527260:CDS | 35.0% |
TCCGTTACTTCTTTACTCAA+AGG | - | chr3_4:81585947-81585966 | None:intergenic | 35.0% | |
! | TTGAGTAAAGAAGTAACGGA+AGG | + | chr3_4:81585947-81585966 | Msa0527260:CDS | 35.0% |
! | TGAGTAAAGAAGTAACGGAA+GGG | + | chr3_4:81585948-81585967 | Msa0527260:CDS | 35.0% |
TATGGTTTAACTGAATCCTC+TGG | + | chr3_4:81586010-81586029 | Msa0527260:CDS | 35.0% | |
!! | TTAACTGAATCCTCTGGAAT+TGG | + | chr3_4:81586016-81586035 | Msa0527260:CDS | 35.0% |
AACGAACCTTTCATAATGGT+GGG | - | chr3_4:81586184-81586203 | None:intergenic | 35.0% | |
AAACGAACCTTTCATAATGG+TGG | - | chr3_4:81586185-81586204 | None:intergenic | 35.0% | |
GAATTGCTAAACAAGTTTCC+GGG | - | chr3_4:81586381-81586400 | None:intergenic | 35.0% | |
TTGATGAGAATGAGAACATG+TGG | + | chr3_4:81586430-81586449 | Msa0527260:intron | 35.0% | |
AATGAGAACATGTGGTCTAT+TGG | + | chr3_4:81586438-81586457 | Msa0527260:intron | 35.0% | |
AAAGTTTGAGAGGGTAAAGT+TGG | - | chr3_4:81586570-81586589 | None:intergenic | 35.0% | |
TGTGTGAGAAAAGTTTGAGA+GGG | - | chr3_4:81586579-81586598 | None:intergenic | 35.0% | |
TTGTGTGAGAAAAGTTTGAG+AGG | - | chr3_4:81586580-81586599 | None:intergenic | 35.0% | |
TTGGCACACAGATTAAGAAA+TGG | - | chr3_4:81586687-81586706 | None:intergenic | 35.0% | |
!! | TTCAAAATGAGTGTCGCTTT+AGG | - | chr3_4:81586712-81586731 | None:intergenic | 35.0% |
!!! | GACACTCATTTTGAAACAGA+GGG | + | chr3_4:81586717-81586736 | Msa0527260:intron | 35.0% |
ACTCACACAAATGGATATTG+GGG | + | chr3_4:81586828-81586847 | Msa0527260:intron | 35.0% | |
TAGATGCAAAGGAAAAAGCT+TGG | + | chr3_4:81587044-81587063 | Msa0527260:intron | 35.0% | |
TAATACCAGCAACTAACCAA+AGG | - | chr3_4:81587074-81587093 | None:intergenic | 35.0% | |
!! | GTTTGCTATATTGATAGCGA+TGG | + | chr3_4:81587235-81587254 | Msa0527260:CDS | 35.0% |
GAAAGAGCTCATTAAGTACA+AGG | + | chr3_4:81587282-81587301 | Msa0527260:CDS | 35.0% | |
CATTAAGTACAAGGGATATC+AGG | + | chr3_4:81587291-81587310 | Msa0527260:CDS | 35.0% | |
TATCAGGTATCCAAATAAGG+AGG | + | chr3_4:81587712-81587731 | Msa0527260:intron | 35.0% | |
CTGCAACAAAATCCATAACT+TGG | - | chr3_4:81587796-81587815 | None:intergenic | 35.0% | |
TCTATACCCAAAAATCCATC+TGG | + | chr3_4:81587973-81587992 | Msa0527260:CDS | 35.0% | |
! | TTCCGAAGAATTTTACCAGA+TGG | - | chr3_4:81587991-81588010 | None:intergenic | 35.0% |
ATCTGGTAAAATTCTTCGGA+AGG | + | chr3_4:81587990-81588009 | Msa0527260:CDS | 35.0% | |
TTATTCTCTATAAGGGAAGC+AGG | - | chr3_4:81588174-81588193 | None:intergenic | 35.0% | |
! | AGAGTTGTTGGTAGGTGAAT+TGG | - | chr3_4:81585166-81585185 | None:intergenic | 40.0% |
AATTCACCTACCAACAACTC+TGG | + | chr3_4:81585165-81585184 | Msa0527260:CDS | 40.0% | |
ACAGGGAAGTAAATGGAGTT+GGG | - | chr3_4:81585266-81585285 | None:intergenic | 40.0% | |
AACAGGGAAGTAAATGGAGT+TGG | - | chr3_4:81585267-81585286 | None:intergenic | 40.0% | |
ATTTCGCGAGATGTATTGAG+GGG | - | chr3_4:81585338-81585357 | None:intergenic | 40.0% | |
GATTTCGCGAGATGTATTGA+GGG | - | chr3_4:81585339-81585358 | None:intergenic | 40.0% | |
AGTGAAAGCAAGAACAGGTT+TGG | - | chr3_4:81585381-81585400 | None:intergenic | 40.0% | |
!! | TGTTGTTGATGATGAGTTGC+TGG | - | chr3_4:81585471-81585490 | None:intergenic | 40.0% |
GAAGATACTACTCCTTTGCT+TGG | - | chr3_4:81585599-81585618 | None:intergenic | 40.0% | |
CATCGCTATGAGATTCTTGT+GGG | - | chr3_4:81585621-81585640 | None:intergenic | 40.0% | |
!! | AGCGATGGTTCAAGTTGTAA+TGG | + | chr3_4:81585634-81585653 | Msa0527260:CDS | 40.0% |
TTCAGCATAGCAACCAGTAT+CGG | - | chr3_4:81585857-81585876 | None:intergenic | 40.0% | |
TTGGAAGAGAGTCGTAAGTA+TGG | + | chr3_4:81586055-81586074 | Msa0527260:CDS | 40.0% | |
AGAGAGTCGTAAGTATGGTA+CGG | + | chr3_4:81586060-81586079 | Msa0527260:CDS | 40.0% | |
GGAAAGACAAAACATCCAGA+TGG | + | chr3_4:81586291-81586310 | Msa0527260:intron | 40.0% | |
TATAAACTCGTGGATCCATC+TGG | - | chr3_4:81586309-81586328 | None:intergenic | 40.0% | |
!!! | GACACTCATTTTGAAACGGA+TGG | - | chr3_4:81586475-81586494 | None:intergenic | 40.0% |
!!! | CGACACTCATTTTGAAACAG+AGG | + | chr3_4:81586716-81586735 | Msa0527260:intron | 40.0% |
TGAAACAGAGGGAGTAATGT+TGG | + | chr3_4:81586728-81586747 | Msa0527260:intron | 40.0% | |
GTTGGTCATATGCTTGACTT+AGG | + | chr3_4:81586746-81586765 | Msa0527260:intron | 40.0% | |
! | ACTGTTTGAGTTCGAACTTG+TGG | + | chr3_4:81586892-81586911 | Msa0527260:intron | 40.0% |
! | CTGTTTGAGTTCGAACTTGT+GGG | + | chr3_4:81586893-81586912 | Msa0527260:intron | 40.0% |
AGTCATGCACGTCTAATGAA+TGG | - | chr3_4:81586996-81587015 | None:intergenic | 40.0% | |
! | AGGTTATTTCAGTAACGAGG+AGG | + | chr3_4:81587165-81587184 | Msa0527260:intron | 40.0% |
!! | CAGAGGGTTGGTTAAAAACA+GGG | + | chr3_4:81587209-81587228 | Msa0527260:CDS | 40.0% |
!! | AGAGGGTTGGTTAAAAACAG+GGG | + | chr3_4:81587210-81587229 | Msa0527260:CDS | 40.0% |
! | CGATGGATTCTTATTTGTCG+TGG | + | chr3_4:81587252-81587271 | Msa0527260:CDS | 40.0% |
TAGTTGAAGTGATCGAAACG+TGG | - | chr3_4:81587359-81587378 | None:intergenic | 40.0% | |
AGCGGTCTTGATTGATAAGA+AGG | - | chr3_4:81587671-81587690 | None:intergenic | 40.0% | |
TTCCAATGGCATATGTGGTA+AGG | + | chr3_4:81587744-81587763 | Msa0527260:CDS | 40.0% | |
TTCCTTACCACATATGCCAT+TGG | - | chr3_4:81587749-81587768 | None:intergenic | 40.0% | |
AATGGCATATGTGGTAAGGA+AGG | + | chr3_4:81587748-81587767 | Msa0527260:CDS | 40.0% | |
! | TATGGATTTTGTTGCAGAGC+AGG | + | chr3_4:81587799-81587818 | Msa0527260:CDS | 40.0% |
AGAGTGATCGATCCAAGAAG+TGG | + | chr3_4:81584999-81585018 | Msa0527260:CDS | 45.0% | |
GAGTGATCGATCCAAGAAGT+GGG | + | chr3_4:81585000-81585019 | Msa0527260:CDS | 45.0% | |
!! | AAAGAGTGGTTTGGTGGAAG+TGG | - | chr3_4:81585071-81585090 | None:intergenic | 45.0% |
! | GCATCTAAAGAGTGGTTTGG+TGG | - | chr3_4:81585077-81585096 | None:intergenic | 45.0% |
GTGGCATCTAAAGAGTGGTT+TGG | - | chr3_4:81585080-81585099 | None:intergenic | 45.0% | |
AAGTGGTGGCATCTAAAGAG+TGG | - | chr3_4:81585085-81585104 | None:intergenic | 45.0% | |
! | GTTGTTGGTAGGTGAATTGG+TGG | - | chr3_4:81585163-81585182 | None:intergenic | 45.0% |
ACTTCCTCACTCTCCAACAT+GGG | + | chr3_4:81585206-81585225 | Msa0527260:CDS | 45.0% | |
AGTAAATGGAGTTGGGAGAG+AGG | - | chr3_4:81585259-81585278 | None:intergenic | 45.0% | |
GCAGACAACAGGGAAGTAAA+TGG | - | chr3_4:81585273-81585292 | None:intergenic | 45.0% | |
AGATGTATTGAGGGGATTGG+TGG | - | chr3_4:81585330-81585349 | None:intergenic | 45.0% | |
CGATTTCGCGAGATGTATTG+AGG | - | chr3_4:81585340-81585359 | None:intergenic | 45.0% | |
GGAGTAGTGAAAGCAAGAAC+AGG | - | chr3_4:81585386-81585405 | None:intergenic | 45.0% | |
TGGAAGTGAAGGTGATGCTT+GGG | - | chr3_4:81585429-81585448 | None:intergenic | 45.0% | |
TTGGAAGTGAAGGTGATGCT+TGG | - | chr3_4:81585430-81585449 | None:intergenic | 45.0% | |
GTGGTGTCCATGAGAATGAT+TGG | - | chr3_4:81585449-81585468 | None:intergenic | 45.0% | |
!! | TGTTGATGATGAGTTGCTGG+TGG | - | chr3_4:81585468-81585487 | None:intergenic | 45.0% |
TCAGTCACTCTACTCAACTC+AGG | - | chr3_4:81585521-81585540 | None:intergenic | 45.0% | |
TCCTGATGAGTAGAGTAGTG+TGG | - | chr3_4:81585567-81585586 | None:intergenic | 45.0% | |
CTCTACTCATCAGGAACAAC+TGG | + | chr3_4:81585572-81585591 | Msa0527260:CDS | 45.0% | |
CCATCGCTATGAGATTCTTG+TGG | - | chr3_4:81585622-81585641 | None:intergenic | 45.0% | |
CCACAAGAATCTCATAGCGA+TGG | + | chr3_4:81585619-81585638 | Msa0527260:CDS | 45.0% | |
!! | GGTCTTGCAGTGTTTGCTAT+GGG | + | chr3_4:81585725-81585744 | Msa0527260:CDS | 45.0% |
!! | GTCTTGCAGTGTTTGCTATG+GGG | + | chr3_4:81585726-81585745 | Msa0527260:CDS | 45.0% |
! | TTTGAGTTCGCTTCATACGG+TGG | + | chr3_4:81585907-81585926 | Msa0527260:CDS | 45.0% |
AGTAGAAGCTCCAATTCCAG+AGG | - | chr3_4:81586029-81586048 | None:intergenic | 45.0% | |
TGGAGCTTCTACTGAGTCTT+TGG | + | chr3_4:81586036-81586055 | Msa0527260:CDS | 45.0% | |
CTCAGCCGTTACCAGTTAAT+CGG | + | chr3_4:81586134-81586153 | Msa0527260:CDS | 45.0% | |
CCAGTCCGATTAACTGGTAA+CGG | - | chr3_4:81586142-81586161 | None:intergenic | 45.0% | |
!! | TTAATCGGACTGGTGAGCTT+TGG | + | chr3_4:81586149-81586168 | Msa0527260:CDS | 45.0% |
TATTGAACACGAGGTAGACC+CGG | + | chr3_4:81586360-81586379 | Msa0527260:intron | 45.0% | |
!! | ATGAGTGTCGCTTTAGGCTT+TGG | - | chr3_4:81586706-81586725 | None:intergenic | 45.0% |
! | GAAAAAGCTTGGTGAGCCTT+TGG | + | chr3_4:81587055-81587074 | Msa0527260:intron | 45.0% |
!! | ATGCAAGACATGGTTGGTGA+TGG | + | chr3_4:81587141-81587160 | Msa0527260:intron | 45.0% |
! | GGCAGGTTATTTCAGTAACG+AGG | + | chr3_4:81587162-81587181 | Msa0527260:intron | 45.0% |
ACATCGACCATTACTCCAGA+GGG | + | chr3_4:81587193-81587212 | Msa0527260:CDS | 45.0% | |
!! | TAACCAACCCTCTGGAGTAA+TGG | - | chr3_4:81587203-81587222 | None:intergenic | 45.0% |
!!! | CCTGTTTTTAACCAACCCTC+TGG | - | chr3_4:81587211-81587230 | None:intergenic | 45.0% |
!! | CCAGAGGGTTGGTTAAAAAC+AGG | + | chr3_4:81587208-81587227 | Msa0527260:CDS | 45.0% |
!! | AACAAAGCCTCTAGTTCTGC+TGG | - | chr3_4:81587505-81587524 | None:intergenic | 45.0% |
AGGTATCCAAATAAGGAGGC+TGG | + | chr3_4:81587716-81587735 | Msa0527260:intron | 45.0% | |
GGTATCCAAATAAGGAGGCT+GGG | + | chr3_4:81587717-81587736 | Msa0527260:intron | 45.0% | |
CTTGTCAGGAAGCCAAGTTA+TGG | + | chr3_4:81587781-81587800 | Msa0527260:CDS | 45.0% | |
! | GCAGAGCAGGTTTGTTTGTT+TGG | + | chr3_4:81587812-81587831 | Msa0527260:intron | 45.0% |
!! | TATAATTAATTTATATTCTT+TGG | - | chr3_4:81587576-81587595 | None:intergenic | 5.0% |
!!! | ATTTATTTTTTATAATATGA+TGG | + | chr3_4:81587628-81587647 | Msa0527260:intron | 5.0% |
!!! | ATTAATTTTTTTCAATATAT+AGG | + | chr3_4:81587909-81587928 | Msa0527260:intron | 5.0% |
CTGCTGCAAAACCCACTTCT+TGG | - | chr3_4:81585014-81585033 | None:intergenic | 50.0% | |
!! | TGGTTTGGTGGAAGTGGAAG+GGG | - | chr3_4:81585065-81585084 | None:intergenic | 50.0% |
!! | GTGGTTTGGTGGAAGTGGAA+GGG | - | chr3_4:81585066-81585085 | None:intergenic | 50.0% |
!! | AGTGGTTTGGTGGAAGTGGA+AGG | - | chr3_4:81585067-81585086 | None:intergenic | 50.0% |
AGGCGTCAATGAAGGCGATA+TGG | - | chr3_4:81585133-81585152 | None:intergenic | 50.0% | |
! | TTGGTAGGTGAATTGGTGGC+CGG | - | chr3_4:81585159-81585178 | None:intergenic | 50.0% |
GTTGGAGAGTGAGGAAGTGA+CGG | - | chr3_4:81585204-81585223 | None:intergenic | 50.0% | |
CACTTCCTCACTCTCCAACA+TGG | + | chr3_4:81585205-81585224 | Msa0527260:CDS | 50.0% | |
CTTCCTCACTCTCCAACATG+GGG | + | chr3_4:81585207-81585226 | Msa0527260:CDS | 50.0% | |
TCCAACATGGGGATCCGTAA+AGG | + | chr3_4:81585218-81585237 | Msa0527260:CDS | 50.0% | |
ACCTTTACGGATCCCCATGT+TGG | - | chr3_4:81585222-81585241 | None:intergenic | 50.0% | |
GGAGGATGACGTCACCTTTA+CGG | - | chr3_4:81585235-81585254 | None:intergenic | 50.0% | |
AAATGGAGTTGGGAGAGAGG+AGG | - | chr3_4:81585256-81585275 | None:intergenic | 50.0% | |
! | TGTATTGAGGGGATTGGTGG+TGG | - | chr3_4:81585327-81585346 | None:intergenic | 50.0% |
GCGAGATGTATTGAGGGGAT+TGG | - | chr3_4:81585333-81585352 | None:intergenic | 50.0% | |
GTAGTGTGGCTGTATCATCC+TGG | - | chr3_4:81585553-81585572 | None:intergenic | 50.0% | |
GCCACACTACTCTACTCATC+AGG | + | chr3_4:81585563-81585582 | Msa0527260:CDS | 50.0% | |
GGAACAACTGGACCAAGCAA+AGG | + | chr3_4:81585584-81585603 | Msa0527260:CDS | 50.0% | |
! | CGGTCTTGCAGTGTTTGCTA+TGG | + | chr3_4:81585724-81585743 | Msa0527260:CDS | 50.0% |
TGCTATGGGGCTTCTTGCTA+TGG | + | chr3_4:81585739-81585758 | Msa0527260:CDS | 50.0% | |
! | GCTATGGGGCTTCTTGCTAT+GGG | + | chr3_4:81585740-81585759 | Msa0527260:CDS | 50.0% |
! | AGCATAGCAACCAGTATCGG+CGG | - | chr3_4:81585854-81585873 | None:intergenic | 50.0% |
TCGCTTCATACGGTGGTTTC+TGG | + | chr3_4:81585914-81585933 | Msa0527260:CDS | 50.0% | |
! | CTTCATACGGTGGTTTCTGG+TGG | + | chr3_4:81585917-81585936 | Msa0527260:CDS | 50.0% |
GAGTCGTAAGTATGGTACGG+CGG | + | chr3_4:81586063-81586082 | Msa0527260:CDS | 50.0% | |
AGTCGTAAGTATGGTACGGC+GGG | + | chr3_4:81586064-81586083 | Msa0527260:CDS | 50.0% | |
GTCAACAATCATAGCCTCCG+TGG | - | chr3_4:81586104-81586123 | None:intergenic | 50.0% | |
CCGTTACCAGTTAATCGGAC+TGG | + | chr3_4:81586139-81586158 | Msa0527260:CDS | 50.0% | |
AGCTCACCAGTCCGATTAAC+TGG | - | chr3_4:81586148-81586167 | None:intergenic | 50.0% | |
CGTGGTCCCACCATTATGAA+AGG | + | chr3_4:81586175-81586194 | Msa0527260:CDS | 50.0% | |
GGATATTGGGGATCGAATCC+TGG | + | chr3_4:81586840-81586859 | Msa0527260:intron | 50.0% | |
ATTGTTAGGCAGAGCACACC+AGG | - | chr3_4:81586861-81586880 | None:intergenic | 50.0% | |
TAGACGTGCATGACTCTCCA+AGG | + | chr3_4:81587001-81587020 | Msa0527260:intron | 50.0% | |
! | GTGAGCCTTTGGTTAGTTGC+TGG | + | chr3_4:81587066-81587085 | Msa0527260:intron | 50.0% |
!! | AAGACATGGTTGGTGATGGC+AGG | + | chr3_4:81587145-81587164 | Msa0527260:intron | 50.0% |
!! | CTCTGGAGTAATGGTCGATG+TGG | - | chr3_4:81587194-81587213 | None:intergenic | 50.0% |
CACATCGACCATTACTCCAG+AGG | + | chr3_4:81587192-81587211 | Msa0527260:CDS | 50.0% | |
!! | AAGCCTCTAGTTCTGCTGGA+GGG | - | chr3_4:81587501-81587520 | None:intergenic | 50.0% |
!! | AAAGCCTCTAGTTCTGCTGG+AGG | - | chr3_4:81587502-81587521 | None:intergenic | 50.0% |
ACAGCAGCGTCTACAATAGC+AGG | - | chr3_4:81587538-81587557 | None:intergenic | 50.0% | |
GCAGGTTCCAATGGCATATG+TGG | + | chr3_4:81587739-81587758 | Msa0527260:CDS | 50.0% | |
GCATATGTGGTAAGGAAGGC+TGG | + | chr3_4:81587752-81587771 | Msa0527260:CDS | 50.0% | |
! | AAGGCTGGAAGTAGCTTGTC+AGG | + | chr3_4:81587767-81587786 | Msa0527260:CDS | 50.0% |
! | GAAGCATTCAGGAATGCAGC+AGG | - | chr3_4:81588152-81588171 | None:intergenic | 50.0% |
!! | AAGGGAAGCAGGAAGCATTC+AGG | - | chr3_4:81588163-81588182 | None:intergenic | 50.0% |
AGCACGCCAGAGTTGTTGGT+AGG | - | chr3_4:81585174-81585193 | None:intergenic | 55.0% | |
CTACAGCACGCCAGAGTTGT+TGG | - | chr3_4:81585178-81585197 | None:intergenic | 55.0% | |
GATCCCCATGTTGGAGAGTG+AGG | - | chr3_4:81585213-81585232 | None:intergenic | 55.0% | |
TGACGGAGAGGCAGACAACA+GGG | - | chr3_4:81585283-81585302 | None:intergenic | 55.0% | |
! | ATGACGGAGAGGCAGACAAC+AGG | - | chr3_4:81585284-81585303 | None:intergenic | 55.0% |
AGTGACTGAGCGCATCAACC+AGG | + | chr3_4:81585532-81585551 | Msa0527260:CDS | 55.0% | |
GTCGTAAGTATGGTACGGCG+GGG | + | chr3_4:81586065-81586084 | Msa0527260:CDS | 55.0% | |
! | ACTGGTGAGCTTTGGCTTCG+TGG | + | chr3_4:81586157-81586176 | Msa0527260:CDS | 55.0% |
CGACCATTACTCCAGAGGGT+TGG | + | chr3_4:81587197-81587216 | Msa0527260:CDS | 55.0% | |
TCCAAATAAGGAGGCTGGGC+AGG | + | chr3_4:81587721-81587740 | Msa0527260:CDS | 55.0% | |
ACCTGCCCAGCCTCCTTATT+TGG | - | chr3_4:81587725-81587744 | None:intergenic | 55.0% | |
GCGGGAGGAGATGAAAGTGG+TGG | - | chr3_4:81585099-81585118 | None:intergenic | 60.0% | |
AGCGCGGGAGGAGATGAAAG+TGG | - | chr3_4:81585102-81585121 | None:intergenic | 60.0% | |
ATCTCCTCCCGCGCTCATCA+CGG | + | chr3_4:81585107-81585126 | Msa0527260:CDS | 60.0% | |
GATATGGCCGTGATGAGCGC+GGG | - | chr3_4:81585117-81585136 | None:intergenic | 60.0% | |
CGATATGGCCGTGATGAGCG+CGG | - | chr3_4:81585118-81585137 | None:intergenic | 60.0% | |
GCCTTCATTGACGCCTCCAC+CGG | + | chr3_4:81585137-81585156 | Msa0527260:CDS | 60.0% | |
! | GTAGGTGAATTGGTGGCCGG+TGG | - | chr3_4:81585156-81585175 | None:intergenic | 60.0% |
TGGAGTTGGGAGAGAGGAGG+AGG | - | chr3_4:81585253-81585272 | None:intergenic | 60.0% | |
TGCCTCTCCGTCATGTCCCT+CGG | + | chr3_4:81585290-81585309 | Msa0527260:CDS | 60.0% | |
! | GATAGCGCCGAGGGACATGA+CGG | - | chr3_4:81585300-81585319 | None:intergenic | 60.0% |
! | GGTGGTGATGATAGCGCCGA+GGG | - | chr3_4:81585309-81585328 | None:intergenic | 60.0% |
! | TGGTGGTGATGATAGCGCCG+AGG | - | chr3_4:81585310-81585329 | None:intergenic | 60.0% |
CGGCGGCACAAGTGGTAAGA+AGG | - | chr3_4:81585837-81585856 | None:intergenic | 60.0% | |
ACCACTTGTGCCGCCGATAC+TGG | + | chr3_4:81585841-81585860 | Msa0527260:CDS | 60.0% | |
!! | ACCAGTATCGGCGGCACAAG+TGG | - | chr3_4:81585845-81585864 | None:intergenic | 60.0% |
GGGGCTTGTGTCTGCTTCCA+CGG | + | chr3_4:81586084-81586103 | Msa0527260:CDS | 60.0% | |
GCTTGTGTCTGCTTCCACGG+AGG | + | chr3_4:81586087-81586106 | Msa0527260:CDS | 60.0% | |
GGTCCCTCCAGCAGAACTAG+AGG | + | chr3_4:81587495-81587514 | Msa0527260:intron | 60.0% | |
!! | GCCGGTGGAGGCGTCAATGA+AGG | - | chr3_4:81585141-81585160 | None:intergenic | 65.0% |
! | GGTGAATTGGTGGCCGGTGG+AGG | - | chr3_4:81585153-81585172 | None:intergenic | 65.0% |
GGAGGCTGGGCAGGTTCCAA+TGG | + | chr3_4:81587730-81587749 | Msa0527260:CDS | 65.0% | |
ATGGCCGTGATGAGCGCGGG+AGG | - | chr3_4:81585114-81585133 | None:intergenic | 70.0% | |
! | CGCCGAGGGACATGACGGAG+AGG | - | chr3_4:81585295-81585314 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 81584803 | 81588485 | 81584803 | ID=Msa0527260;Name=Msa0527260 |
chr3_4 | mRNA | 81584803 | 81588485 | 81584803 | ID=Msa0527260-mRNA-1;Parent=Msa0527260;Name=Msa0527260-mRNA-1;_AED=0.05;_eAED=0.05;_QI=163|1|1|1|1|1|5|441|553 |
chr3_4 | exon | 81584803 | 81586196 | 81584803 | ID=Msa0527260-mRNA-1:exon:24596;Parent=Msa0527260-mRNA-1 |
chr3_4 | exon | 81587167 | 81587312 | 81587167 | ID=Msa0527260-mRNA-1:exon:24597;Parent=Msa0527260-mRNA-1 |
chr3_4 | exon | 81587496 | 81587563 | 81587496 | ID=Msa0527260-mRNA-1:exon:24598;Parent=Msa0527260-mRNA-1 |
chr3_4 | exon | 81587718 | 81587820 | 81587718 | ID=Msa0527260-mRNA-1:exon:24599;Parent=Msa0527260-mRNA-1 |
chr3_4 | exon | 81587931 | 81588485 | 81587931 | ID=Msa0527260-mRNA-1:exon:24600;Parent=Msa0527260-mRNA-1 |
chr3_4 | five_prime_UTR | 81584803 | 81584965 | 81584803 | ID=Msa0527260-mRNA-1:five_prime_utr;Parent=Msa0527260-mRNA-1 |
chr3_4 | CDS | 81584966 | 81586196 | 81584966 | ID=Msa0527260-mRNA-1:cds;Parent=Msa0527260-mRNA-1 |
chr3_4 | CDS | 81587167 | 81587312 | 81587167 | ID=Msa0527260-mRNA-1:cds;Parent=Msa0527260-mRNA-1 |
chr3_4 | CDS | 81587496 | 81587563 | 81587496 | ID=Msa0527260-mRNA-1:cds;Parent=Msa0527260-mRNA-1 |
chr3_4 | CDS | 81587718 | 81587820 | 81587718 | ID=Msa0527260-mRNA-1:cds;Parent=Msa0527260-mRNA-1 |
chr3_4 | CDS | 81587931 | 81588044 | 81587931 | ID=Msa0527260-mRNA-1:cds;Parent=Msa0527260-mRNA-1 |
chr3_4 | three_prime_UTR | 81588045 | 81588485 | 81588045 | ID=Msa0527260-mRNA-1:three_prime_utr;Parent=Msa0527260-mRNA-1 |
Gene Sequence |
Protein sequence |