Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051050 | XP_013466038.1 | 98.282 | 524 | 9 | 0 | 1 | 524 | 1 | 524 | 0.0 | 1060 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051050 | sp|Q9LLB0|AOS2_SOLLC | 66.216 | 518 | 162 | 5 | 5 | 522 | 6 | 510 | 0.0 | 719 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051050 | Q7X9B4 | 98.282 | 524 | 9 | 0 | 1 | 524 | 1 | 524 | 0.0 | 1060 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015670 | Msa0051050 | 0.806131 | 9.549024e-50 | -8.615850e-47 |
| Msa0051050 | Msa0101240 | 0.982251 | 1.293846e-154 | -8.615850e-47 |
| Msa0051050 | Msa0122740 | 0.802916 | 4.469505e-49 | -8.615850e-47 |
| Msa0051050 | Msa0184410 | 0.824814 | 6.584187e-54 | -8.615850e-47 |
| Msa0051050 | Msa0211200 | 0.844315 | 8.156914e-59 | -8.615850e-47 |
| Msa0051050 | Msa0244890 | 0.844129 | 9.150074e-59 | -8.615850e-47 |
| Msa0051050 | Msa0244900 | 0.818626 | 1.777144e-52 | -8.615850e-47 |
| Msa0051050 | Msa0283490 | 0.839894 | 1.205481e-57 | -8.615850e-47 |
| Msa0051050 | Msa0290680 | 0.823307 | 1.486288e-53 | -8.615850e-47 |
| Msa0051050 | Msa0328730 | 0.821520 | 3.865504e-53 | -8.615850e-47 |
| Msa0051050 | Msa0408340 | 0.844739 | 6.272807e-59 | -8.615850e-47 |
| Msa0051050 | Msa0501410 | 0.831552 | 1.565207e-55 | -8.615850e-47 |
| Msa0051050 | Msa0527260 | 0.824153 | 9.415906e-54 | -8.615850e-47 |
| Msa0051050 | Msa0572750 | 0.819933 | 8.952836e-53 | -8.615850e-47 |
| Msa0051050 | Msa0614380 | 0.846507 | 2.079222e-59 | -8.615850e-47 |
| Msa0051050 | Msa0615290 | 0.811401 | 7.130367e-51 | -8.615850e-47 |
| Msa0051050 | Msa0657660 | 0.803828 | 2.893074e-49 | -8.615850e-47 |
| Msa0051050 | Msa0696850 | 0.807576 | 4.724121e-50 | -8.615850e-47 |
| Msa0051050 | Msa0697590 | 0.802494 | 5.461728e-49 | -8.615850e-47 |
| Msa0051050 | Msa0715420 | 0.821817 | 3.300491e-53 | -8.615850e-47 |
| Msa0051050 | Msa0718800 | 0.804804 | 1.812246e-49 | -8.615850e-47 |
| Msa0051050 | Msa0738110 | 0.821358 | 4.212335e-53 | -8.615850e-47 |
| Msa0051050 | Msa0754770 | 0.842715 | 2.182793e-58 | -8.615850e-47 |
| Msa0051050 | Msa0758250 | 0.845898 | 3.047145e-59 | -8.615850e-47 |
| Msa0051050 | Msa0786980 | 0.805503 | 1.293434e-49 | -8.615850e-47 |
| Msa0051050 | Msa0796630 | 0.837762 | 4.293130e-57 | -8.615850e-47 |
| Msa0051050 | Msa0798310 | 0.801647 | 8.159524e-49 | -8.615850e-47 |
| Msa0051050 | Msa0799620 | 0.841651 | 4.175629e-58 | -8.615850e-47 |
| Msa0051050 | Msa0833890 | 0.829504 | 4.962240e-55 | -8.615850e-47 |
| Msa0051050 | Msa0834180 | 0.832866 | 7.401117e-56 | -8.615850e-47 |
| Msa0051050 | Msa0837870 | 0.835599 | 1.527549e-56 | -8.615850e-47 |
| Msa0051050 | Msa0865970 | 0.859700 | 3.449234e-63 | -8.615850e-47 |
| Msa0051050 | Msa0866070 | 0.858734 | 6.720645e-63 | -8.615850e-47 |
| Msa0051050 | Msa0903170 | 0.804961 | 1.680247e-49 | -8.615850e-47 |
| Msa0051050 | Msa0938990 | 0.803991 | 2.676688e-49 | -8.615850e-47 |
| Msa0051050 | Msa1034700 | 0.819745 | 9.882234e-53 | -8.615850e-47 |
| Msa0051050 | Msa1043120 | 0.834762 | 2.484748e-56 | -8.615850e-47 |
| Msa0051050 | Msa1063370 | 0.803537 | 3.325187e-49 | -8.615850e-47 |
| Msa0051050 | Msa1084640 | 0.816233 | 6.147016e-52 | -8.615850e-47 |
| Msa0051050 | Msa1152410 | 0.806036 | 9.998974e-50 | -8.615850e-47 |
| Msa0051050 | Msa1156950 | 0.815972 | 7.029913e-52 | -8.615850e-47 |
| Msa0051050 | Msa1189820 | 0.807221 | 5.618741e-50 | -8.615850e-47 |
| Msa0051050 | Msa1250420 | 0.801905 | 7.221077e-49 | -8.615850e-47 |
| Msa0051050 | Msa1266490 | 0.824665 | 7.138098e-54 | -8.615850e-47 |
| Msa0051050 | Msa1268530 | 0.819899 | 9.114590e-53 | -8.615850e-47 |
| Msa0051050 | Msa1284990 | 0.831739 | 1.407155e-55 | -8.615850e-47 |
| Msa0051050 | Msa1340610 | 0.801279 | 9.705149e-49 | -8.615850e-47 |
| Msa0051050 | Msa1360420 | 0.972298 | 1.540931e-134 | -8.615850e-47 |
| Msa0051050 | Msa1366550 | 0.817238 | 3.658330e-52 | -8.615850e-47 |
| Msa0051050 | Msa1371590 | 0.820071 | 8.322646e-53 | -8.615850e-47 |
| Msa0051050 | Msa1379700 | 0.822981 | 1.770967e-53 | -8.615850e-47 |
| Msa0051050 | Msa1388090 | 0.832816 | 7.617509e-56 | -8.615850e-47 |
| Msa0051050 | Msa1399260 | 0.862811 | 3.889601e-64 | -8.615850e-47 |
| Msa0051050 | Msa1400340 | 0.818619 | 1.783111e-52 | -8.615850e-47 |
| Msa0051050 | Msa1409490 | 0.822609 | 2.161749e-53 | -8.615850e-47 |
| Msa0051050 | Msa1416730 | 0.805644 | 1.208225e-49 | -8.615850e-47 |
| Msa0051050 | Msa1417050 | 0.805493 | 1.299743e-49 | -8.615850e-47 |
| Msa0051050 | Msa1424630 | 0.811677 | 6.211127e-51 | -8.615850e-47 |
| Msa0051050 | Msa1430550 | 0.802064 | 6.698892e-49 | -8.615850e-47 |
| Msa0051050 | Msa1439650 | 0.839323 | 1.697740e-57 | -8.615850e-47 |
| Msa0051050 | Msa1441270 | 0.807933 | 3.967964e-50 | -8.615850e-47 |
| Msa0051050 | Msa1463030 | 0.831496 | 1.615268e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051050 | MtrunA17_Chr1g0154381 | 98.282 | 524 | 9 | 0 | 1 | 524 | 1 | 524 | 0.0 | 1060 |
| Msa0051050 | MtrunA17_Chr3g0141271 | 71.915 | 470 | 130 | 2 | 57 | 524 | 90 | 559 | 0.0 | 707 |
| Msa0051050 | MtrunA17_Chr4g0034141 | 48.125 | 480 | 243 | 4 | 48 | 523 | 2 | 479 | 2.07e-167 | 483 |
| Msa0051050 | MtrunA17_Chr1g0162571 | 50.418 | 478 | 229 | 6 | 52 | 523 | 8 | 483 | 4.85e-167 | 481 |
| Msa0051050 | MtrunA17_Chr2g0322321 | 39.787 | 470 | 269 | 5 | 56 | 522 | 21 | 479 | 6.56e-120 | 361 |
| Msa0051050 | MtrunA17_Chr1g0162591 | 48.750 | 240 | 121 | 2 | 283 | 522 | 4 | 241 | 2.71e-82 | 256 |
| Msa0051050 | MtrunA17_Chr1g0162581 | 45.418 | 251 | 131 | 4 | 40 | 285 | 2 | 251 | 4.81e-68 | 219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0051050 | AT5G42650.1 | 60.077 | 521 | 204 | 3 | 4 | 524 | 2 | 518 | 0.0 | 649 |
| Msa0051050 | AT4G15440.1 | 40.217 | 368 | 216 | 4 | 137 | 501 | 4 | 370 | 8.89e-93 | 288 |
Find 115 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTGATTTCAAGACTTT+TGG | 0.223131 | 1_2:+5117078 | Msa0051050:CDS |
| CATGACGACTACGTGATTTA+AGG | 0.223634 | 1_2:-5116169 | None:intergenic |
| TTCTTGAGCTGTTCATGTTT+TGG | 0.234640 | 1_2:-5116131 | None:intergenic |
| CCGATCCATTTCATCAAATT+AGG | 0.234831 | 1_2:-5116638 | None:intergenic |
| GAGAATCAACTTGCTGAAAA+TGG | 0.244874 | 1_2:+5116239 | Msa0051050:CDS |
| CCACCGGTTCCATTACAATT+TGG | 0.257621 | 1_2:+5116803 | Msa0051050:CDS |
| TACAATTTGGAAGAGCAAAA+AGG | 0.266309 | 1_2:+5116816 | Msa0051050:CDS |
| CGTAAAATCCCTGGTGACTA+TGG | 0.271642 | 1_2:+5115810 | Msa0051050:CDS |
| TCTGAAACTGAGGATCTTAT+AGG | 0.272458 | 1_2:-5115732 | None:intergenic |
| ACAGTTGGAGATTGAGATTC+TGG | 0.272740 | 1_2:-5117022 | None:intergenic |
| GTGATTGAAAATCATGAAAA+TGG | 0.293983 | 1_2:+5116845 | Msa0051050:CDS |
| AAACATGTGCTTTGGTCTAA+TGG | 0.336037 | 1_2:+5116998 | Msa0051050:CDS |
| CAAGTTGGAAATTCACCTTT+AGG | 0.336124 | 1_2:+5117139 | Msa0051050:CDS |
| AAGAAAGGTGAATTGTTGTT+AGG | 0.339578 | 1_2:+5116878 | Msa0051050:CDS |
| AAAAGAAATCATAAAGTCTT+TGG | 0.340810 | 1_2:-5116493 | None:intergenic |
| ATAGTCTAAACGGTCTTTGT+AGG | 0.357496 | 1_2:-5115850 | None:intergenic |
| GTTAGGTCCAGTTCTGAAAC+TGG | 0.360881 | 1_2:+5116397 | Msa0051050:CDS |
| AGTCCAAGTTCGGTGTCAAC+AGG | 0.376332 | 1_2:-5116335 | None:intergenic |
| TCTTTCTTAATGAGCCGAAA+TGG | 0.384153 | 1_2:-5116467 | None:intergenic |
| AACGTAGTTGTACTCCTTGA+TGG | 0.385691 | 1_2:+5115981 | Msa0051050:CDS |
| TTTGCTCTTCCAAATTGTAA+TGG | 0.388470 | 1_2:-5116812 | None:intergenic |
| TCAAGGAGTACAACTACGTT+AGG | 0.399517 | 1_2:-5115978 | None:intergenic |
| AACCCTGTTGACACCGAACT+TGG | 0.419339 | 1_2:+5116332 | Msa0051050:CDS |
| CTCGAGGAAGCAGAGCGTTT+AGG | 0.429148 | 1_2:+5116536 | Msa0051050:CDS |
| TTCTTGAATCGTGCTTTGTT+TGG | 0.430570 | 1_2:+5116305 | Msa0051050:CDS |
| TTAGGATCTTTAGTAGCAAA+AGG | 0.430684 | 1_2:-5116908 | None:intergenic |
| AATTGTTGAAACATGTGCTT+TGG | 0.436664 | 1_2:+5116990 | Msa0051050:CDS |
| TTCGATGCGTCGAAGAGGAC+GGG | 0.442058 | 1_2:-5116014 | None:intergenic |
| CTAATTTGATGAAATGGATC+GGG | 0.442169 | 1_2:+5116639 | Msa0051050:CDS |
| CTTTCTTAATGAGCCGAAAT+GGG | 0.448393 | 1_2:-5116466 | None:intergenic |
| GATAGATTTGTTGGTGATGA+AGG | 0.449657 | 1_2:+5116962 | Msa0051050:CDS |
| ATCGGAAGCTTGGTTGTTTG+TGG | 0.457864 | 1_2:-5115786 | None:intergenic |
| TGGACCGTCAAGTCCAAGTT+CGG | 0.457945 | 1_2:-5116345 | None:intergenic |
| TTTGTTGCAGATAGATTTGT+TGG | 0.462474 | 1_2:+5116953 | Msa0051050:CDS |
| GGTTGTAGAAATAGTCTAAA+CGG | 0.463350 | 1_2:-5115860 | None:intergenic |
| TGCTGGCGGGGAGATTACTA+TGG | 0.465831 | 1_2:+5116721 | Msa0051050:CDS |
| AAATTAGCGACGGAAATTAG+AGG | 0.465886 | 1_2:+5116686 | Msa0051050:CDS |
| GGTAGGCCCAGTTTCAGAAC+TGG | 0.470888 | 1_2:-5116404 | None:intergenic |
| GGAGATTACTATGGCGGCCA+TGG | 0.473614 | 1_2:+5116730 | Msa0051050:CDS |
| GACACCGAACTTGGACTTGA+CGG | 0.474937 | 1_2:+5116341 | Msa0051050:CDS |
| CTTCCAAATTGTAATGGAAC+CGG | 0.475194 | 1_2:-5116806 | None:intergenic |
| GCGTTTAGGTGTTTCAAAAG+AGG | 0.480545 | 1_2:+5116550 | Msa0051050:CDS |
| CCACCAGTGAGTTCTGTAGA+AGG | 0.484397 | 1_2:-5116074 | None:intergenic |
| TCTTTGTAGGGTTGGATGAA+AGG | 0.484515 | 1_2:-5115837 | None:intergenic |
| GATTCCTTTGAGATTCAAGT+TGG | 0.484812 | 1_2:+5117124 | Msa0051050:CDS |
| TCGTGATAAGGTGGTGGAAG+AGG | 0.486006 | 1_2:-5115688 | None:intergenic |
| CTAAACGGTCTTTGTAGGGT+TGG | 0.489158 | 1_2:-5115845 | None:intergenic |
| GGTGGAGGAACGTCGTGATA+AGG | 0.495151 | 1_2:-5115700 | None:intergenic |
| GAATCTCAATCTCCAACTGT+TGG | 0.495729 | 1_2:+5117025 | Msa0051050:CDS |
| CTGTAGCATGACTGAAACTC+AGG | 0.495943 | 1_2:-5116197 | None:intergenic |
| CTTTGTAGGGTTGGATGAAA+GGG | 0.497717 | 1_2:-5115836 | None:intergenic |
| CCTAATTTGATGAAATGGAT+CGG | 0.498399 | 1_2:+5116638 | Msa0051050:CDS |
| AATCTCAATCTCCAACTGTT+GGG | 0.502505 | 1_2:+5117026 | Msa0051050:CDS |
| AGAGGAGCAATTAGATCTGC+TGG | 0.504448 | 1_2:+5116704 | Msa0051050:CDS |
| TTCCGCACTAACGTTCCTCC+TGG | 0.506823 | 1_2:+5115936 | Msa0051050:CDS |
| GGTTGTTTGTGGTTGAGAGA+TGG | 0.510021 | 1_2:-5115775 | None:intergenic |
| CATTGTTTATTCCCAACAGT+TGG | 0.511671 | 1_2:-5117037 | None:intergenic |
| TTAGACTATTTCTACAACCA+AGG | 0.515498 | 1_2:+5115864 | Msa0051050:CDS |
| ACTGGGCCTACCGAAGTTTG+TGG | 0.518134 | 1_2:+5116415 | Msa0051050:CDS |
| TAGTCTAAACGGTCTTTGTA+GGG | 0.523147 | 1_2:-5115849 | None:intergenic |
| GGATCTTATAGGTGGAAGAA+AGG | 0.524920 | 1_2:-5115721 | None:intergenic |
| GAGCAATTAGATCTGCTGGC+GGG | 0.527113 | 1_2:+5116708 | Msa0051050:CDS |
| TGAAGTATTCATCACGACCT+TGG | 0.527248 | 1_2:-5115881 | None:intergenic |
| GAGATGGAGACTTGGAAAGG+TGG | 0.530805 | 1_2:-5115759 | None:intergenic |
| GATAAAACCGATGTCTTCAC+AGG | 0.538925 | 1_2:+5116041 | Msa0051050:CDS |
| AGCAATTAGATCTGCTGGCG+GGG | 0.539011 | 1_2:+5116709 | Msa0051050:CDS |
| CAAGGAGTACAACTACGTTA+GGG | 0.540708 | 1_2:-5115977 | None:intergenic |
| AAAGGGATGCCATAGTCACC+AGG | 0.542937 | 1_2:-5115819 | None:intergenic |
| GTGGTTGAGAGATGGAGACT+TGG | 0.545394 | 1_2:-5115767 | None:intergenic |
| ATTTCCAACTTGAATCTCAA+AGG | 0.547715 | 1_2:-5117128 | None:intergenic |
| CGTGATAAGGTGGTGGAAGA+GGG | 0.548060 | 1_2:-5115687 | None:intergenic |
| CTTCCGATCCGTAAAATCCC+TGG | 0.555994 | 1_2:+5115801 | Msa0051050:CDS |
| TGTTTGAGGAGATTAGGAGA+AGG | 0.557408 | 1_2:-5115654 | None:intergenic |
| CTTCGATGCGTCGAAGAGGA+CGG | 0.557973 | 1_2:-5116015 | None:intergenic |
| TGATCTCTTTAGTGAGGTGA+GGG | 0.559767 | 1_2:-5117173 | None:intergenic |
| TCTTATAGGTGGAAGAAAGG+TGG | 0.561423 | 1_2:-5115718 | None:intergenic |
| AGGGTAATAGCAGGACCTAA+AGG | 0.563300 | 1_2:-5117154 | None:intergenic |
| TTGATCTCTTTAGTGAGGTG+AGG | 0.564316 | 1_2:-5117174 | None:intergenic |
| AGAAGGAGTTGAAAGAGTAG+AGG | 0.564504 | 1_2:-5115637 | None:intergenic |
| CATCAACGGCATATTCTCCA+TGG | 0.564805 | 1_2:-5116747 | None:intergenic |
| TAGTGCGGAAGATGGTTGAC+TGG | 0.567027 | 1_2:-5115923 | None:intergenic |
| CGATCTTCGATGCGTCGAAG+AGG | 0.569780 | 1_2:-5116019 | None:intergenic |
| AGGAACGTTAGTGCGGAAGA+TGG | 0.576272 | 1_2:-5115931 | None:intergenic |
| TATACCACTGATTTCATCAA+CGG | 0.579119 | 1_2:-5116761 | None:intergenic |
| TTTAGGTGTTTCAAAAGAGG+AGG | 0.581669 | 1_2:+5116553 | Msa0051050:CDS |
| GGATCGGGCGCGGTGGAGTG+AGG | 0.582337 | 1_2:+5116654 | Msa0051050:CDS |
| ATAGAATCTTCCACAAACTT+CGG | 0.583947 | 1_2:-5116425 | None:intergenic |
| TCGATGCGTCGAAGAGGACG+GGG | 0.588579 | 1_2:-5116013 | None:intergenic |
| CCAAATTGTAATGGAACCGG+TGG | 0.594525 | 1_2:-5116803 | None:intergenic |
| GTTGGGAATAAACAATGTGC+TGG | 0.598250 | 1_2:+5117043 | Msa0051050:CDS |
| GGAACGTCGTGATAAGGTGG+TGG | 0.600776 | 1_2:-5115694 | None:intergenic |
| TATAGGTGGAAGAAAGGTGG+AGG | 0.604481 | 1_2:-5115715 | None:intergenic |
| TTCCTCGGGATTTGCTCTCG+AGG | 0.607265 | 1_2:+5116520 | Msa0051050:CDS |
| AGTGAGGTGAGGGTAATAGC+AGG | 0.615642 | 1_2:-5117163 | None:intergenic |
| AATCTTCCACAAACTTCGGT+AGG | 0.620192 | 1_2:-5116421 | None:intergenic |
| GTCCAAGTTCGGTGTCAACA+GGG | 0.625604 | 1_2:-5116334 | None:intergenic |
| ATGAAATGGATCGGGCGCGG+TGG | 0.626352 | 1_2:+5116647 | Msa0051050:CDS |
| TTAGGTCCAGTTCTGAAACT+GGG | 0.627548 | 1_2:+5116398 | Msa0051050:CDS |
| GGAGGAACGTCGTGATAAGG+TGG | 0.627902 | 1_2:-5115697 | None:intergenic |
| GACCAGGAGGAACGTTAGTG+CGG | 0.628753 | 1_2:-5115938 | None:intergenic |
| GAAACTGAGGATCTTATAGG+TGG | 0.630333 | 1_2:-5115729 | None:intergenic |
| GAAGCTTGATCTCTTTAGTG+AGG | 0.631938 | 1_2:-5117179 | None:intergenic |
| TTGATGAAATGGATCGGGCG+CGG | 0.633244 | 1_2:+5116644 | Msa0051050:CDS |
| ACACCTTCTACAGAACTCAC+TGG | 0.635223 | 1_2:+5116071 | Msa0051050:CDS |
| GTTGCATACAAAATTAGCGA+CGG | 0.661214 | 1_2:+5116676 | Msa0051050:CDS |
| TGGCGGGGAGATTACTATGG+CGG | 0.671730 | 1_2:+5116724 | Msa0051050:CDS |
| TGAGAGATGGAGACTTGGAA+AGG | 0.672847 | 1_2:-5115762 | None:intergenic |
| GGAGCAATTAGATCTGCTGG+CGG | 0.676095 | 1_2:+5116707 | Msa0051050:CDS |
| CAAAAGTCTTGAAATCAATG+TGG | 0.688379 | 1_2:-5117077 | None:intergenic |
| TATGCCGTTGATGAAATCAG+TGG | 0.696277 | 1_2:+5116757 | Msa0051050:CDS |
| AAGGGATGCCATAGTCACCA+GGG | 0.700881 | 1_2:-5115818 | None:intergenic |
| TTCCTCGAGAGCAAATCCCG+AGG | 0.708927 | 1_2:-5116522 | None:intergenic |
| CCTTCTACAGAACTCACTGG+TGG | 0.709735 | 1_2:+5116074 | Msa0051050:CDS |
| GTATGTACCTGTGAAGACAT+CGG | 0.723042 | 1_2:-5116048 | None:intergenic |
| TGAGCTATGAAAGGACCAGG+AGG | 0.748813 | 1_2:-5115951 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAAATCATAAAGTCTT+TGG | - | chr1_2:5116496-5116515 | None:intergenic | 20.0% |
| !!! | TTTTTCCTAATTTGATGAAA+TGG | + | chr1_2:5116633-5116652 | Msa0051050:CDS | 20.0% |
| !!! | AAATCATGAAAATGGTTTTT+TGG | + | chr1_2:5116853-5116872 | Msa0051050:CDS | 20.0% |
| !! | AAAAGAAATCATAAAGTCTT+TGG | - | chr1_2:5116496-5116515 | None:intergenic | 20.0% |
| !!! | TTTTTCCTAATTTGATGAAA+TGG | + | chr1_2:5116633-5116652 | Msa0051050:CDS | 20.0% |
| !!! | AAATCATGAAAATGGTTTTT+TGG | + | chr1_2:5116853-5116872 | Msa0051050:CDS | 20.0% |
| !!! | AAATGGGTTTTATTTCAGTT+AGG | + | chr1_2:5116380-5116399 | Msa0051050:CDS | 25.0% |
| ! | GTGATTGAAAATCATGAAAA+TGG | + | chr1_2:5116845-5116864 | Msa0051050:CDS | 25.0% |
| !!! | AATGGTTTTTTGGTTAAGAA+AGG | + | chr1_2:5116863-5116882 | Msa0051050:CDS | 25.0% |
| !!! | AAATGGGTTTTATTTCAGTT+AGG | + | chr1_2:5116380-5116399 | Msa0051050:CDS | 25.0% |
| ! | GTGATTGAAAATCATGAAAA+TGG | + | chr1_2:5116845-5116864 | Msa0051050:CDS | 25.0% |
| !!! | AATGGTTTTTTGGTTAAGAA+AGG | + | chr1_2:5116863-5116882 | Msa0051050:CDS | 25.0% |
| GGTTGTAGAAATAGTCTAAA+CGG | - | chr1_2:5115863-5115882 | None:intergenic | 30.0% | |
| !! | TTAGACTATTTCTACAACCA+AGG | + | chr1_2:5115864-5115883 | Msa0051050:CDS | 30.0% |
| !!! | CAGAGAGTTTTTTAATGCTT+TGG | + | chr1_2:5116217-5116236 | Msa0051050:CDS | 30.0% |
| TCCAAAAATGGTTCAGAAAT+GGG | + | chr1_2:5116364-5116383 | Msa0051050:CDS | 30.0% | |
| ATAGAATCTTCCACAAACTT+CGG | - | chr1_2:5116428-5116447 | None:intergenic | 30.0% | |
| ! | ATAATTTTCGTCTCCCATTT+CGG | + | chr1_2:5116453-5116472 | Msa0051050:CDS | 30.0% |
| ! | TGATTTCTTTTATGCTTCCT+CGG | + | chr1_2:5116505-5116524 | Msa0051050:CDS | 30.0% |
| CCTAATTTGATGAAATGGAT+CGG | + | chr1_2:5116638-5116657 | Msa0051050:CDS | 30.0% | |
| CTAATTTGATGAAATGGATC+GGG | + | chr1_2:5116639-5116658 | Msa0051050:CDS | 30.0% | |
| !! | TATACCACTGATTTCATCAA+CGG | - | chr1_2:5116764-5116783 | None:intergenic | 30.0% |
| TTTGCTCTTCCAAATTGTAA+TGG | - | chr1_2:5116815-5116834 | None:intergenic | 30.0% | |
| TACAATTTGGAAGAGCAAAA+AGG | + | chr1_2:5116816-5116835 | Msa0051050:CDS | 30.0% | |
| ACAATTTGGAAGAGCAAAAA+GGG | + | chr1_2:5116817-5116836 | Msa0051050:CDS | 30.0% | |
| ! | AAGAAAGGTGAATTGTTGTT+AGG | + | chr1_2:5116878-5116897 | Msa0051050:CDS | 30.0% |
| TTAGGATCTTTAGTAGCAAA+AGG | - | chr1_2:5116911-5116930 | None:intergenic | 30.0% | |
| TCTGCTCTATCAAAAATCTT+AGG | - | chr1_2:5116929-5116948 | None:intergenic | 30.0% | |
| ! | TAAGATTTTTGATAGAGCAG+AGG | + | chr1_2:5116928-5116947 | Msa0051050:CDS | 30.0% |
| TTTGTTGCAGATAGATTTGT+TGG | + | chr1_2:5116953-5116972 | Msa0051050:CDS | 30.0% | |
| AATTGTTGAAACATGTGCTT+TGG | + | chr1_2:5116990-5117009 | Msa0051050:CDS | 30.0% | |
| CAAAAGTCTTGAAATCAATG+TGG | - | chr1_2:5117080-5117099 | None:intergenic | 30.0% | |
| !!! | CACATTGATTTCAAGACTTT+TGG | + | chr1_2:5117078-5117097 | Msa0051050:CDS | 30.0% |
| !! | TGGTTGTTGAACTTTTTCTT+AGG | + | chr1_2:5117098-5117117 | Msa0051050:CDS | 30.0% |
| ATTTCCAACTTGAATCTCAA+AGG | - | chr1_2:5117131-5117150 | None:intergenic | 30.0% | |
| GGTTGTAGAAATAGTCTAAA+CGG | - | chr1_2:5115863-5115882 | None:intergenic | 30.0% | |
| !! | TTAGACTATTTCTACAACCA+AGG | + | chr1_2:5115864-5115883 | Msa0051050:CDS | 30.0% |
| !!! | CAGAGAGTTTTTTAATGCTT+TGG | + | chr1_2:5116217-5116236 | Msa0051050:CDS | 30.0% |
| TCCAAAAATGGTTCAGAAAT+GGG | + | chr1_2:5116364-5116383 | Msa0051050:CDS | 30.0% | |
| ATAGAATCTTCCACAAACTT+CGG | - | chr1_2:5116428-5116447 | None:intergenic | 30.0% | |
| ! | ATAATTTTCGTCTCCCATTT+CGG | + | chr1_2:5116453-5116472 | Msa0051050:CDS | 30.0% |
| ! | TGATTTCTTTTATGCTTCCT+CGG | + | chr1_2:5116505-5116524 | Msa0051050:CDS | 30.0% |
| CCTAATTTGATGAAATGGAT+CGG | + | chr1_2:5116638-5116657 | Msa0051050:CDS | 30.0% | |
| CTAATTTGATGAAATGGATC+GGG | + | chr1_2:5116639-5116658 | Msa0051050:CDS | 30.0% | |
| !! | TATACCACTGATTTCATCAA+CGG | - | chr1_2:5116764-5116783 | None:intergenic | 30.0% |
| TTTGCTCTTCCAAATTGTAA+TGG | - | chr1_2:5116815-5116834 | None:intergenic | 30.0% | |
| TACAATTTGGAAGAGCAAAA+AGG | + | chr1_2:5116816-5116835 | Msa0051050:CDS | 30.0% | |
| ACAATTTGGAAGAGCAAAAA+GGG | + | chr1_2:5116817-5116836 | Msa0051050:CDS | 30.0% | |
| ! | AAGAAAGGTGAATTGTTGTT+AGG | + | chr1_2:5116878-5116897 | Msa0051050:CDS | 30.0% |
| TTAGGATCTTTAGTAGCAAA+AGG | - | chr1_2:5116911-5116930 | None:intergenic | 30.0% | |
| TCTGCTCTATCAAAAATCTT+AGG | - | chr1_2:5116929-5116948 | None:intergenic | 30.0% | |
| ! | TAAGATTTTTGATAGAGCAG+AGG | + | chr1_2:5116928-5116947 | Msa0051050:CDS | 30.0% |
| TTTGTTGCAGATAGATTTGT+TGG | + | chr1_2:5116953-5116972 | Msa0051050:CDS | 30.0% | |
| AATTGTTGAAACATGTGCTT+TGG | + | chr1_2:5116990-5117009 | Msa0051050:CDS | 30.0% | |
| CAAAAGTCTTGAAATCAATG+TGG | - | chr1_2:5117080-5117099 | None:intergenic | 30.0% | |
| !!! | CACATTGATTTCAAGACTTT+TGG | + | chr1_2:5117078-5117097 | Msa0051050:CDS | 30.0% |
| !! | TGGTTGTTGAACTTTTTCTT+AGG | + | chr1_2:5117098-5117117 | Msa0051050:CDS | 30.0% |
| ATTTCCAACTTGAATCTCAA+AGG | - | chr1_2:5117131-5117150 | None:intergenic | 30.0% | |
| !!! | TTTTGGTGTTTGAGGAGATT+AGG | - | chr1_2:5115663-5115682 | None:intergenic | 35.0% |
| ! | TCTGAAACTGAGGATCTTAT+AGG | - | chr1_2:5115735-5115754 | None:intergenic | 35.0% |
| TAGTCTAAACGGTCTTTGTA+GGG | - | chr1_2:5115852-5115871 | None:intergenic | 35.0% | |
| ATAGTCTAAACGGTCTTTGT+AGG | - | chr1_2:5115853-5115872 | None:intergenic | 35.0% | |
| ! | AGATGGTTGACTGGTATTTT+TGG | - | chr1_2:5115917-5115936 | None:intergenic | 35.0% |
| !!! | TTAGGGTTTTGAGCTATGAA+AGG | - | chr1_2:5115963-5115982 | None:intergenic | 35.0% |
| ! | TTCTTGAGCTGTTCATGTTT+TGG | - | chr1_2:5116134-5116153 | None:intergenic | 35.0% |
| !! | GAGAATCAACTTGCTGAAAA+TGG | + | chr1_2:5116239-5116258 | Msa0051050:CDS | 35.0% |
| ! | TTCTTGAATCGTGCTTTGTT+TGG | + | chr1_2:5116305-5116324 | Msa0051050:CDS | 35.0% |
| GTCCAAAAATGGTTCAGAAA+TGG | + | chr1_2:5116363-5116382 | Msa0051050:CDS | 35.0% | |
| ! | ACCCATTTCTGAACCATTTT+TGG | - | chr1_2:5116368-5116387 | None:intergenic | 35.0% |
| CTTTCTTAATGAGCCGAAAT+GGG | - | chr1_2:5116469-5116488 | None:intergenic | 35.0% | |
| TCTTTCTTAATGAGCCGAAA+TGG | - | chr1_2:5116470-5116489 | None:intergenic | 35.0% | |
| ! | GATTTCTTTTATGCTTCCTC+GGG | + | chr1_2:5116506-5116525 | Msa0051050:CDS | 35.0% |
| TTTAGGTGTTTCAAAAGAGG+AGG | + | chr1_2:5116553-5116572 | Msa0051050:CDS | 35.0% | |
| !!! | GCAACGTGTTTTAATTCGTT+TGG | + | chr1_2:5116596-5116615 | Msa0051050:CDS | 35.0% |
| !!! | ACGTGTTTTAATTCGTTTGG+CGG | + | chr1_2:5116599-5116618 | Msa0051050:CDS | 35.0% |
| CCGATCCATTTCATCAAATT+AGG | - | chr1_2:5116641-5116660 | None:intergenic | 35.0% | |
| GTTGCATACAAAATTAGCGA+CGG | + | chr1_2:5116676-5116695 | Msa0051050:CDS | 35.0% | |
| AAATTAGCGACGGAAATTAG+AGG | + | chr1_2:5116686-5116705 | Msa0051050:CDS | 35.0% | |
| ! | CTTCCAAATTGTAATGGAAC+CGG | - | chr1_2:5116809-5116828 | None:intergenic | 35.0% |
| !! | GATAGATTTGTTGGTGATGA+AGG | + | chr1_2:5116962-5116981 | Msa0051050:CDS | 35.0% |
| AAACATGTGCTTTGGTCTAA+TGG | + | chr1_2:5116998-5117017 | Msa0051050:CDS | 35.0% | |
| AATCTCAATCTCCAACTGTT+GGG | + | chr1_2:5117026-5117045 | Msa0051050:CDS | 35.0% | |
| CATTGTTTATTCCCAACAGT+TGG | - | chr1_2:5117040-5117059 | None:intergenic | 35.0% | |
| !! | GATTCCTTTGAGATTCAAGT+TGG | + | chr1_2:5117124-5117143 | Msa0051050:CDS | 35.0% |
| ! | CAAGTTGGAAATTCACCTTT+AGG | + | chr1_2:5117139-5117158 | Msa0051050:CDS | 35.0% |
| !!! | TTTTGGTGTTTGAGGAGATT+AGG | - | chr1_2:5115663-5115682 | None:intergenic | 35.0% |
| ! | TCTGAAACTGAGGATCTTAT+AGG | - | chr1_2:5115735-5115754 | None:intergenic | 35.0% |
| TAGTCTAAACGGTCTTTGTA+GGG | - | chr1_2:5115852-5115871 | None:intergenic | 35.0% | |
| ATAGTCTAAACGGTCTTTGT+AGG | - | chr1_2:5115853-5115872 | None:intergenic | 35.0% | |
| ! | AGATGGTTGACTGGTATTTT+TGG | - | chr1_2:5115917-5115936 | None:intergenic | 35.0% |
| !!! | TTAGGGTTTTGAGCTATGAA+AGG | - | chr1_2:5115963-5115982 | None:intergenic | 35.0% |
| ! | TTCTTGAGCTGTTCATGTTT+TGG | - | chr1_2:5116134-5116153 | None:intergenic | 35.0% |
| !! | GAGAATCAACTTGCTGAAAA+TGG | + | chr1_2:5116239-5116258 | Msa0051050:CDS | 35.0% |
| ! | TTCTTGAATCGTGCTTTGTT+TGG | + | chr1_2:5116305-5116324 | Msa0051050:CDS | 35.0% |
| GTCCAAAAATGGTTCAGAAA+TGG | + | chr1_2:5116363-5116382 | Msa0051050:CDS | 35.0% | |
| ! | ACCCATTTCTGAACCATTTT+TGG | - | chr1_2:5116368-5116387 | None:intergenic | 35.0% |
| CTTTCTTAATGAGCCGAAAT+GGG | - | chr1_2:5116469-5116488 | None:intergenic | 35.0% | |
| TCTTTCTTAATGAGCCGAAA+TGG | - | chr1_2:5116470-5116489 | None:intergenic | 35.0% | |
| ! | GATTTCTTTTATGCTTCCTC+GGG | + | chr1_2:5116506-5116525 | Msa0051050:CDS | 35.0% |
| TTTAGGTGTTTCAAAAGAGG+AGG | + | chr1_2:5116553-5116572 | Msa0051050:CDS | 35.0% | |
| !!! | GCAACGTGTTTTAATTCGTT+TGG | + | chr1_2:5116596-5116615 | Msa0051050:CDS | 35.0% |
| !!! | ACGTGTTTTAATTCGTTTGG+CGG | + | chr1_2:5116599-5116618 | Msa0051050:CDS | 35.0% |
| CCGATCCATTTCATCAAATT+AGG | - | chr1_2:5116641-5116660 | None:intergenic | 35.0% | |
| GTTGCATACAAAATTAGCGA+CGG | + | chr1_2:5116676-5116695 | Msa0051050:CDS | 35.0% | |
| AAATTAGCGACGGAAATTAG+AGG | + | chr1_2:5116686-5116705 | Msa0051050:CDS | 35.0% | |
| ! | CTTCCAAATTGTAATGGAAC+CGG | - | chr1_2:5116809-5116828 | None:intergenic | 35.0% |
| !! | GATAGATTTGTTGGTGATGA+AGG | + | chr1_2:5116962-5116981 | Msa0051050:CDS | 35.0% |
| AAACATGTGCTTTGGTCTAA+TGG | + | chr1_2:5116998-5117017 | Msa0051050:CDS | 35.0% | |
| AATCTCAATCTCCAACTGTT+GGG | + | chr1_2:5117026-5117045 | Msa0051050:CDS | 35.0% | |
| CATTGTTTATTCCCAACAGT+TGG | - | chr1_2:5117040-5117059 | None:intergenic | 35.0% | |
| !! | GATTCCTTTGAGATTCAAGT+TGG | + | chr1_2:5117124-5117143 | Msa0051050:CDS | 35.0% |
| ! | CAAGTTGGAAATTCACCTTT+AGG | + | chr1_2:5117139-5117158 | Msa0051050:CDS | 35.0% |
| AGAAGGAGTTGAAAGAGTAG+AGG | - | chr1_2:5115640-5115659 | None:intergenic | 40.0% | |
| TGTTTGAGGAGATTAGGAGA+AGG | - | chr1_2:5115657-5115676 | None:intergenic | 40.0% | |
| !!! | AGGGTCTTTTTTGGTGTTTG+AGG | - | chr1_2:5115671-5115690 | None:intergenic | 40.0% |
| TCTTATAGGTGGAAGAAAGG+TGG | - | chr1_2:5115721-5115740 | None:intergenic | 40.0% | |
| GGATCTTATAGGTGGAAGAA+AGG | - | chr1_2:5115724-5115743 | None:intergenic | 40.0% | |
| GAAACTGAGGATCTTATAGG+TGG | - | chr1_2:5115732-5115751 | None:intergenic | 40.0% | |
| !!! | AGGTGGTTTTTCTGAAACTG+AGG | - | chr1_2:5115745-5115764 | None:intergenic | 40.0% |
| ! | CATAGTCACCAGGGATTTTA+CGG | - | chr1_2:5115812-5115831 | None:intergenic | 40.0% |
| CTTTGTAGGGTTGGATGAAA+GGG | - | chr1_2:5115839-5115858 | None:intergenic | 40.0% | |
| TCTTTGTAGGGTTGGATGAA+AGG | - | chr1_2:5115840-5115859 | None:intergenic | 40.0% | |
| ! | TGAAGTATTCATCACGACCT+TGG | - | chr1_2:5115884-5115903 | None:intergenic | 40.0% |
| ! | TTTTGAGCTATGAAAGGACC+AGG | - | chr1_2:5115957-5115976 | None:intergenic | 40.0% |
| ! | CAAGGAGTACAACTACGTTA+GGG | - | chr1_2:5115980-5115999 | None:intergenic | 40.0% |
| ! | TCAAGGAGTACAACTACGTT+AGG | - | chr1_2:5115981-5116000 | None:intergenic | 40.0% |
| AACGTAGTTGTACTCCTTGA+TGG | + | chr1_2:5115981-5116000 | Msa0051050:CDS | 40.0% | |
| GATAAAACCGATGTCTTCAC+AGG | + | chr1_2:5116041-5116060 | Msa0051050:CDS | 40.0% | |
| GTATGTACCTGTGAAGACAT+CGG | - | chr1_2:5116051-5116070 | None:intergenic | 40.0% | |
| !!! | TGTTCATGTTTTGGTTCGGA+GGG | - | chr1_2:5116125-5116144 | None:intergenic | 40.0% |
| !!! | GAGCTGTTCATGTTTTGGTT+CGG | - | chr1_2:5116129-5116148 | None:intergenic | 40.0% |
| CATGACGACTACGTGATTTA+AGG | - | chr1_2:5116172-5116191 | None:intergenic | 40.0% | |
| !! | TTAGGTCCAGTTCTGAAACT+GGG | + | chr1_2:5116398-5116417 | Msa0051050:CDS | 40.0% |
| AATCTTCCACAAACTTCGGT+AGG | - | chr1_2:5116424-5116443 | None:intergenic | 40.0% | |
| GCGTTTAGGTGTTTCAAAAG+AGG | + | chr1_2:5116550-5116569 | Msa0051050:CDS | 40.0% | |
| !!! | CGTGTTTTAATTCGTTTGGC+GGG | + | chr1_2:5116600-5116619 | Msa0051050:CDS | 40.0% |
| ! | TATGCCGTTGATGAAATCAG+TGG | + | chr1_2:5116757-5116776 | Msa0051050:CDS | 40.0% |
| !! | AGCTTTTCGTATTGATCCAC+CGG | + | chr1_2:5116787-5116806 | Msa0051050:CDS | 40.0% |
| ACAGTTGGAGATTGAGATTC+TGG | - | chr1_2:5117025-5117044 | None:intergenic | 40.0% | |
| GAATCTCAATCTCCAACTGT+TGG | + | chr1_2:5117025-5117044 | Msa0051050:CDS | 40.0% | |
| GTTGGGAATAAACAATGTGC+TGG | + | chr1_2:5117043-5117062 | Msa0051050:CDS | 40.0% | |
| TGATCTCTTTAGTGAGGTGA+GGG | - | chr1_2:5117176-5117195 | None:intergenic | 40.0% | |
| TTGATCTCTTTAGTGAGGTG+AGG | - | chr1_2:5117177-5117196 | None:intergenic | 40.0% | |
| GAAGCTTGATCTCTTTAGTG+AGG | - | chr1_2:5117182-5117201 | None:intergenic | 40.0% | |
| AGAAGGAGTTGAAAGAGTAG+AGG | - | chr1_2:5115640-5115659 | None:intergenic | 40.0% | |
| TGTTTGAGGAGATTAGGAGA+AGG | - | chr1_2:5115657-5115676 | None:intergenic | 40.0% | |
| !!! | AGGGTCTTTTTTGGTGTTTG+AGG | - | chr1_2:5115671-5115690 | None:intergenic | 40.0% |
| TCTTATAGGTGGAAGAAAGG+TGG | - | chr1_2:5115721-5115740 | None:intergenic | 40.0% | |
| GGATCTTATAGGTGGAAGAA+AGG | - | chr1_2:5115724-5115743 | None:intergenic | 40.0% | |
| GAAACTGAGGATCTTATAGG+TGG | - | chr1_2:5115732-5115751 | None:intergenic | 40.0% | |
| !!! | AGGTGGTTTTTCTGAAACTG+AGG | - | chr1_2:5115745-5115764 | None:intergenic | 40.0% |
| ! | CATAGTCACCAGGGATTTTA+CGG | - | chr1_2:5115812-5115831 | None:intergenic | 40.0% |
| CTTTGTAGGGTTGGATGAAA+GGG | - | chr1_2:5115839-5115858 | None:intergenic | 40.0% | |
| TCTTTGTAGGGTTGGATGAA+AGG | - | chr1_2:5115840-5115859 | None:intergenic | 40.0% | |
| ! | TGAAGTATTCATCACGACCT+TGG | - | chr1_2:5115884-5115903 | None:intergenic | 40.0% |
| ! | TTTTGAGCTATGAAAGGACC+AGG | - | chr1_2:5115957-5115976 | None:intergenic | 40.0% |
| ! | CAAGGAGTACAACTACGTTA+GGG | - | chr1_2:5115980-5115999 | None:intergenic | 40.0% |
| ! | TCAAGGAGTACAACTACGTT+AGG | - | chr1_2:5115981-5116000 | None:intergenic | 40.0% |
| AACGTAGTTGTACTCCTTGA+TGG | + | chr1_2:5115981-5116000 | Msa0051050:CDS | 40.0% | |
| GATAAAACCGATGTCTTCAC+AGG | + | chr1_2:5116041-5116060 | Msa0051050:CDS | 40.0% | |
| GTATGTACCTGTGAAGACAT+CGG | - | chr1_2:5116051-5116070 | None:intergenic | 40.0% | |
| !!! | TGTTCATGTTTTGGTTCGGA+GGG | - | chr1_2:5116125-5116144 | None:intergenic | 40.0% |
| !!! | GAGCTGTTCATGTTTTGGTT+CGG | - | chr1_2:5116129-5116148 | None:intergenic | 40.0% |
| CATGACGACTACGTGATTTA+AGG | - | chr1_2:5116172-5116191 | None:intergenic | 40.0% | |
| !! | TTAGGTCCAGTTCTGAAACT+GGG | + | chr1_2:5116398-5116417 | Msa0051050:CDS | 40.0% |
| AATCTTCCACAAACTTCGGT+AGG | - | chr1_2:5116424-5116443 | None:intergenic | 40.0% | |
| GCGTTTAGGTGTTTCAAAAG+AGG | + | chr1_2:5116550-5116569 | Msa0051050:CDS | 40.0% | |
| !!! | CGTGTTTTAATTCGTTTGGC+GGG | + | chr1_2:5116600-5116619 | Msa0051050:CDS | 40.0% |
| ! | TATGCCGTTGATGAAATCAG+TGG | + | chr1_2:5116757-5116776 | Msa0051050:CDS | 40.0% |
| !! | AGCTTTTCGTATTGATCCAC+CGG | + | chr1_2:5116787-5116806 | Msa0051050:CDS | 40.0% |
| ACAGTTGGAGATTGAGATTC+TGG | - | chr1_2:5117025-5117044 | None:intergenic | 40.0% | |
| GAATCTCAATCTCCAACTGT+TGG | + | chr1_2:5117025-5117044 | Msa0051050:CDS | 40.0% | |
| GTTGGGAATAAACAATGTGC+TGG | + | chr1_2:5117043-5117062 | Msa0051050:CDS | 40.0% | |
| TGATCTCTTTAGTGAGGTGA+GGG | - | chr1_2:5117176-5117195 | None:intergenic | 40.0% | |
| TTGATCTCTTTAGTGAGGTG+AGG | - | chr1_2:5117177-5117196 | None:intergenic | 40.0% | |
| GAAGCTTGATCTCTTTAGTG+AGG | - | chr1_2:5117182-5117201 | None:intergenic | 40.0% | |
| !!! | TGGTGGAAGAGGGTCTTTTT+TGG | - | chr1_2:5115680-5115699 | None:intergenic | 45.0% |
| TATAGGTGGAAGAAAGGTGG+AGG | - | chr1_2:5115718-5115737 | None:intergenic | 45.0% | |
| TGAGAGATGGAGACTTGGAA+AGG | - | chr1_2:5115765-5115784 | None:intergenic | 45.0% | |
| GGTTGTTTGTGGTTGAGAGA+TGG | - | chr1_2:5115778-5115797 | None:intergenic | 45.0% | |
| ATCGGAAGCTTGGTTGTTTG+TGG | - | chr1_2:5115789-5115808 | None:intergenic | 45.0% | |
| ! | GATTTTACGGATCGGAAGCT+TGG | - | chr1_2:5115799-5115818 | None:intergenic | 45.0% |
| ! | TCACCAGGGATTTTACGGAT+CGG | - | chr1_2:5115807-5115826 | None:intergenic | 45.0% |
| CGTAAAATCCCTGGTGACTA+TGG | + | chr1_2:5115810-5115829 | Msa0051050:CDS | 45.0% | |
| CTAAACGGTCTTTGTAGGGT+TGG | - | chr1_2:5115848-5115867 | None:intergenic | 45.0% | |
| ACACCTTCTACAGAACTCAC+TGG | + | chr1_2:5116071-5116090 | Msa0051050:CDS | 45.0% | |
| !!! | CTGTTCATGTTTTGGTTCGG+AGG | - | chr1_2:5116126-5116145 | None:intergenic | 45.0% |
| CTGTAGCATGACTGAAACTC+AGG | - | chr1_2:5116200-5116219 | None:intergenic | 45.0% | |
| TGGACTTGACGGTCCAAAAA+TGG | + | chr1_2:5116352-5116371 | Msa0051050:CDS | 45.0% | |
| !! | GTTAGGTCCAGTTCTGAAAC+TGG | + | chr1_2:5116397-5116416 | Msa0051050:CDS | 45.0% |
| AGAGGAGCAATTAGATCTGC+TGG | + | chr1_2:5116704-5116723 | Msa0051050:CDS | 45.0% | |
| CATCAACGGCATATTCTCCA+TGG | - | chr1_2:5116750-5116769 | None:intergenic | 45.0% | |
| ! | CCAAATTGTAATGGAACCGG+TGG | - | chr1_2:5116806-5116825 | None:intergenic | 45.0% |
| !! | CCACCGGTTCCATTACAATT+TGG | + | chr1_2:5116803-5116822 | Msa0051050:CDS | 45.0% |
| TGGAAGAGCAAAAAGGGACA+TGG | + | chr1_2:5116823-5116842 | Msa0051050:CDS | 45.0% | |
| AGGGTAATAGCAGGACCTAA+AGG | - | chr1_2:5117157-5117176 | None:intergenic | 45.0% | |
| !!! | TGGTGGAAGAGGGTCTTTTT+TGG | - | chr1_2:5115680-5115699 | None:intergenic | 45.0% |
| TATAGGTGGAAGAAAGGTGG+AGG | - | chr1_2:5115718-5115737 | None:intergenic | 45.0% | |
| TGAGAGATGGAGACTTGGAA+AGG | - | chr1_2:5115765-5115784 | None:intergenic | 45.0% | |
| GGTTGTTTGTGGTTGAGAGA+TGG | - | chr1_2:5115778-5115797 | None:intergenic | 45.0% | |
| ATCGGAAGCTTGGTTGTTTG+TGG | - | chr1_2:5115789-5115808 | None:intergenic | 45.0% | |
| ! | GATTTTACGGATCGGAAGCT+TGG | - | chr1_2:5115799-5115818 | None:intergenic | 45.0% |
| ! | TCACCAGGGATTTTACGGAT+CGG | - | chr1_2:5115807-5115826 | None:intergenic | 45.0% |
| CGTAAAATCCCTGGTGACTA+TGG | + | chr1_2:5115810-5115829 | Msa0051050:CDS | 45.0% | |
| CTAAACGGTCTTTGTAGGGT+TGG | - | chr1_2:5115848-5115867 | None:intergenic | 45.0% | |
| ACACCTTCTACAGAACTCAC+TGG | + | chr1_2:5116071-5116090 | Msa0051050:CDS | 45.0% | |
| !!! | CTGTTCATGTTTTGGTTCGG+AGG | - | chr1_2:5116126-5116145 | None:intergenic | 45.0% |
| CTGTAGCATGACTGAAACTC+AGG | - | chr1_2:5116200-5116219 | None:intergenic | 45.0% | |
| TGGACTTGACGGTCCAAAAA+TGG | + | chr1_2:5116352-5116371 | Msa0051050:CDS | 45.0% | |
| !! | GTTAGGTCCAGTTCTGAAAC+TGG | + | chr1_2:5116397-5116416 | Msa0051050:CDS | 45.0% |
| AGAGGAGCAATTAGATCTGC+TGG | + | chr1_2:5116704-5116723 | Msa0051050:CDS | 45.0% | |
| CATCAACGGCATATTCTCCA+TGG | - | chr1_2:5116750-5116769 | None:intergenic | 45.0% | |
| ! | CCAAATTGTAATGGAACCGG+TGG | - | chr1_2:5116806-5116825 | None:intergenic | 45.0% |
| !! | CCACCGGTTCCATTACAATT+TGG | + | chr1_2:5116803-5116822 | Msa0051050:CDS | 45.0% |
| TGGAAGAGCAAAAAGGGACA+TGG | + | chr1_2:5116823-5116842 | Msa0051050:CDS | 45.0% | |
| AGGGTAATAGCAGGACCTAA+AGG | - | chr1_2:5117157-5117176 | None:intergenic | 45.0% | |
| !! | CGTGATAAGGTGGTGGAAGA+GGG | - | chr1_2:5115690-5115709 | None:intergenic | 50.0% |
| !! | TCGTGATAAGGTGGTGGAAG+AGG | - | chr1_2:5115691-5115710 | None:intergenic | 50.0% |
| GAGATGGAGACTTGGAAAGG+TGG | - | chr1_2:5115762-5115781 | None:intergenic | 50.0% | |
| GTGGTTGAGAGATGGAGACT+TGG | - | chr1_2:5115770-5115789 | None:intergenic | 50.0% | |
| CTTCCGATCCGTAAAATCCC+TGG | + | chr1_2:5115801-5115820 | Msa0051050:CDS | 50.0% | |
| AAGGGATGCCATAGTCACCA+GGG | - | chr1_2:5115821-5115840 | None:intergenic | 50.0% | |
| AAAGGGATGCCATAGTCACC+AGG | - | chr1_2:5115822-5115841 | None:intergenic | 50.0% | |
| TAGTGCGGAAGATGGTTGAC+TGG | - | chr1_2:5115926-5115945 | None:intergenic | 50.0% | |
| AGGAACGTTAGTGCGGAAGA+TGG | - | chr1_2:5115934-5115953 | None:intergenic | 50.0% | |
| TGAGCTATGAAAGGACCAGG+AGG | - | chr1_2:5115954-5115973 | None:intergenic | 50.0% | |
| ! | CGGGGAAGCTTTTACCATCA+AGG | - | chr1_2:5115998-5116017 | None:intergenic | 50.0% |
| CCACCAGTGAGTTCTGTAGA+AGG | - | chr1_2:5116077-5116096 | None:intergenic | 50.0% | |
| CCTTCTACAGAACTCACTGG+TGG | + | chr1_2:5116074-5116093 | Msa0051050:CDS | 50.0% | |
| !!! | GTTTTGGTTCGGAGGGATCA+AGG | - | chr1_2:5116118-5116137 | None:intergenic | 50.0% |
| AACCCTGTTGACACCGAACT+TGG | + | chr1_2:5116332-5116351 | Msa0051050:CDS | 50.0% | |
| !! | GTCCAAGTTCGGTGTCAACA+GGG | - | chr1_2:5116337-5116356 | None:intergenic | 50.0% |
| !! | AGTCCAAGTTCGGTGTCAAC+AGG | - | chr1_2:5116338-5116357 | None:intergenic | 50.0% |
| GACACCGAACTTGGACTTGA+CGG | + | chr1_2:5116341-5116360 | Msa0051050:CDS | 50.0% | |
| TGGACCGTCAAGTCCAAGTT+CGG | - | chr1_2:5116348-5116367 | None:intergenic | 50.0% | |
| TTGATGAAATGGATCGGGCG+CGG | + | chr1_2:5116644-5116663 | Msa0051050:CDS | 50.0% | |
| GGAGCAATTAGATCTGCTGG+CGG | + | chr1_2:5116707-5116726 | Msa0051050:CDS | 50.0% | |
| GAGCAATTAGATCTGCTGGC+GGG | + | chr1_2:5116708-5116727 | Msa0051050:CDS | 50.0% | |
| AGCAATTAGATCTGCTGGCG+GGG | + | chr1_2:5116709-5116728 | Msa0051050:CDS | 50.0% | |
| AGTGAGGTGAGGGTAATAGC+AGG | - | chr1_2:5117166-5117185 | None:intergenic | 50.0% | |
| !! | CGTGATAAGGTGGTGGAAGA+GGG | - | chr1_2:5115690-5115709 | None:intergenic | 50.0% |
| !! | TCGTGATAAGGTGGTGGAAG+AGG | - | chr1_2:5115691-5115710 | None:intergenic | 50.0% |
| GAGATGGAGACTTGGAAAGG+TGG | - | chr1_2:5115762-5115781 | None:intergenic | 50.0% | |
| GTGGTTGAGAGATGGAGACT+TGG | - | chr1_2:5115770-5115789 | None:intergenic | 50.0% | |
| CTTCCGATCCGTAAAATCCC+TGG | + | chr1_2:5115801-5115820 | Msa0051050:CDS | 50.0% | |
| AAGGGATGCCATAGTCACCA+GGG | - | chr1_2:5115821-5115840 | None:intergenic | 50.0% | |
| AAAGGGATGCCATAGTCACC+AGG | - | chr1_2:5115822-5115841 | None:intergenic | 50.0% | |
| TAGTGCGGAAGATGGTTGAC+TGG | - | chr1_2:5115926-5115945 | None:intergenic | 50.0% | |
| AGGAACGTTAGTGCGGAAGA+TGG | - | chr1_2:5115934-5115953 | None:intergenic | 50.0% | |
| TGAGCTATGAAAGGACCAGG+AGG | - | chr1_2:5115954-5115973 | None:intergenic | 50.0% | |
| ! | CGGGGAAGCTTTTACCATCA+AGG | - | chr1_2:5115998-5116017 | None:intergenic | 50.0% |
| CCACCAGTGAGTTCTGTAGA+AGG | - | chr1_2:5116077-5116096 | None:intergenic | 50.0% | |
| CCTTCTACAGAACTCACTGG+TGG | + | chr1_2:5116074-5116093 | Msa0051050:CDS | 50.0% | |
| !!! | GTTTTGGTTCGGAGGGATCA+AGG | - | chr1_2:5116118-5116137 | None:intergenic | 50.0% |
| AACCCTGTTGACACCGAACT+TGG | + | chr1_2:5116332-5116351 | Msa0051050:CDS | 50.0% | |
| !! | GTCCAAGTTCGGTGTCAACA+GGG | - | chr1_2:5116337-5116356 | None:intergenic | 50.0% |
| !! | AGTCCAAGTTCGGTGTCAAC+AGG | - | chr1_2:5116338-5116357 | None:intergenic | 50.0% |
| GACACCGAACTTGGACTTGA+CGG | + | chr1_2:5116341-5116360 | Msa0051050:CDS | 50.0% | |
| TGGACCGTCAAGTCCAAGTT+CGG | - | chr1_2:5116348-5116367 | None:intergenic | 50.0% | |
| TTGATGAAATGGATCGGGCG+CGG | + | chr1_2:5116644-5116663 | Msa0051050:CDS | 50.0% | |
| GGAGCAATTAGATCTGCTGG+CGG | + | chr1_2:5116707-5116726 | Msa0051050:CDS | 50.0% | |
| GAGCAATTAGATCTGCTGGC+GGG | + | chr1_2:5116708-5116727 | Msa0051050:CDS | 50.0% | |
| AGCAATTAGATCTGCTGGCG+GGG | + | chr1_2:5116709-5116728 | Msa0051050:CDS | 50.0% | |
| AGTGAGGTGAGGGTAATAGC+AGG | - | chr1_2:5117166-5117185 | None:intergenic | 50.0% | |
| GGAACGTCGTGATAAGGTGG+TGG | - | chr1_2:5115697-5115716 | None:intergenic | 55.0% | |
| GGAGGAACGTCGTGATAAGG+TGG | - | chr1_2:5115700-5115719 | None:intergenic | 55.0% | |
| GGTGGAGGAACGTCGTGATA+AGG | - | chr1_2:5115703-5115722 | None:intergenic | 55.0% | |
| TTCCGCACTAACGTTCCTCC+TGG | + | chr1_2:5115936-5115955 | Msa0051050:CDS | 55.0% | |
| GACCAGGAGGAACGTTAGTG+CGG | - | chr1_2:5115941-5115960 | None:intergenic | 55.0% | |
| TTCGATGCGTCGAAGAGGAC+GGG | - | chr1_2:5116017-5116036 | None:intergenic | 55.0% | |
| CTTCGATGCGTCGAAGAGGA+CGG | - | chr1_2:5116018-5116037 | None:intergenic | 55.0% | |
| CGATCTTCGATGCGTCGAAG+AGG | - | chr1_2:5116022-5116041 | None:intergenic | 55.0% | |
| GGTAGGCCCAGTTTCAGAAC+TGG | - | chr1_2:5116407-5116426 | None:intergenic | 55.0% | |
| ACTGGGCCTACCGAAGTTTG+TGG | + | chr1_2:5116415-5116434 | Msa0051050:CDS | 55.0% | |
| ! | TTCCTCGGGATTTGCTCTCG+AGG | + | chr1_2:5116520-5116539 | Msa0051050:CDS | 55.0% |
| TTCCTCGAGAGCAAATCCCG+AGG | - | chr1_2:5116525-5116544 | None:intergenic | 55.0% | |
| ! | CTCGAGGAAGCAGAGCGTTT+AGG | + | chr1_2:5116536-5116555 | Msa0051050:CDS | 55.0% |
| TGCTGGCGGGGAGATTACTA+TGG | + | chr1_2:5116721-5116740 | Msa0051050:CDS | 55.0% | |
| TGGCGGGGAGATTACTATGG+CGG | + | chr1_2:5116724-5116743 | Msa0051050:CDS | 55.0% | |
| GGAGATTACTATGGCGGCCA+TGG | + | chr1_2:5116730-5116749 | Msa0051050:CDS | 55.0% | |
| GGAACGTCGTGATAAGGTGG+TGG | - | chr1_2:5115697-5115716 | None:intergenic | 55.0% | |
| GGAGGAACGTCGTGATAAGG+TGG | - | chr1_2:5115700-5115719 | None:intergenic | 55.0% | |
| GGTGGAGGAACGTCGTGATA+AGG | - | chr1_2:5115703-5115722 | None:intergenic | 55.0% | |
| TTCCGCACTAACGTTCCTCC+TGG | + | chr1_2:5115936-5115955 | Msa0051050:CDS | 55.0% | |
| GACCAGGAGGAACGTTAGTG+CGG | - | chr1_2:5115941-5115960 | None:intergenic | 55.0% | |
| TTCGATGCGTCGAAGAGGAC+GGG | - | chr1_2:5116017-5116036 | None:intergenic | 55.0% | |
| CTTCGATGCGTCGAAGAGGA+CGG | - | chr1_2:5116018-5116037 | None:intergenic | 55.0% | |
| CGATCTTCGATGCGTCGAAG+AGG | - | chr1_2:5116022-5116041 | None:intergenic | 55.0% | |
| GGTAGGCCCAGTTTCAGAAC+TGG | - | chr1_2:5116407-5116426 | None:intergenic | 55.0% | |
| ACTGGGCCTACCGAAGTTTG+TGG | + | chr1_2:5116415-5116434 | Msa0051050:CDS | 55.0% | |
| ! | TTCCTCGGGATTTGCTCTCG+AGG | + | chr1_2:5116520-5116539 | Msa0051050:CDS | 55.0% |
| TTCCTCGAGAGCAAATCCCG+AGG | - | chr1_2:5116525-5116544 | None:intergenic | 55.0% | |
| ! | CTCGAGGAAGCAGAGCGTTT+AGG | + | chr1_2:5116536-5116555 | Msa0051050:CDS | 55.0% |
| TGCTGGCGGGGAGATTACTA+TGG | + | chr1_2:5116721-5116740 | Msa0051050:CDS | 55.0% | |
| TGGCGGGGAGATTACTATGG+CGG | + | chr1_2:5116724-5116743 | Msa0051050:CDS | 55.0% | |
| GGAGATTACTATGGCGGCCA+TGG | + | chr1_2:5116730-5116749 | Msa0051050:CDS | 55.0% | |
| TCGATGCGTCGAAGAGGACG+GGG | - | chr1_2:5116016-5116035 | None:intergenic | 60.0% | |
| ATGAAATGGATCGGGCGCGG+TGG | + | chr1_2:5116647-5116666 | Msa0051050:CDS | 60.0% | |
| TCGATGCGTCGAAGAGGACG+GGG | - | chr1_2:5116016-5116035 | None:intergenic | 60.0% | |
| ATGAAATGGATCGGGCGCGG+TGG | + | chr1_2:5116647-5116666 | Msa0051050:CDS | 60.0% | |
| GGATCGGGCGCGGTGGAGTG+AGG | + | chr1_2:5116654-5116673 | Msa0051050:CDS | 75.0% | |
| GGATCGGGCGCGGTGGAGTG+AGG | + | chr1_2:5116654-5116673 | Msa0051050:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 5115630 | 5117204 | 5115630 | ID=Msa0051050;Name=Msa0051050 |
| chr1_2 | mRNA | 5115630 | 5117204 | 5115630 | ID=Msa0051050-mRNA-1;Parent=Msa0051050;Name=Msa0051050-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|524 |
| chr1_2 | exon | 5115630 | 5117204 | 5115630 | ID=Msa0051050-mRNA-1:exon:1445;Parent=Msa0051050-mRNA-1 |
| chr1_2 | CDS | 5115630 | 5117204 | 5115630 | ID=Msa0051050-mRNA-1:cds;Parent=Msa0051050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
