AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0539660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539660 MtrunA17_Chr4g0014701 97.735 618 14 0 1 618 1 618 0.0 1247
Msa0539660 MtrunA17_Chr5g0404891 24.453 503 292 15 49 475 96 586 7.73e-34 136
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0539660 AT1G72090.1 67.675 628 161 6 1 615 1 599 0.0 838
Msa0539660 AT4G36390.1 23.848 499 291 16 54 475 131 617 8.80e-31 128

Find 402 sgRNAs with CRISPR-Local

Find 840 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAAATAAAATTCAGAATT+TGG 0.066880 4_1:+20814044 Msa0539660:three_prime_UTR
AGAAAATTCTTCTTACTATT+TGG 0.112930 4_1:+20817124 Msa0539660:three_prime_UTR
CGGTTGAACATAATGCATTT+TGG 0.124007 4_1:+20815014 Msa0539660:three_prime_UTR
CTTGGAAAGGTGAGAATTTC+AGG 0.135122 4_1:-20817103 None:intergenic
CTTTGTTGATAAAGCTCTTT+TGG 0.140734 4_1:+20813657 Msa0539660:CDS
TGAGAGGCTTTAACCCTATT+TGG 0.166763 4_1:-20815821 None:intergenic
TTTCATTAAAATAAGGATTT+TGG 0.191984 4_1:+20817230 Msa0539660:three_prime_UTR
CCAATTAATGTTGGTTGTTT+AGG 0.201753 4_1:+20809982 Msa0539660:CDS
AAGGAAAAGTGGAAAGAATT+TGG 0.220156 4_1:+20812494 Msa0539660:CDS
CGTTTGAATTTGTTTCATTA+GGG 0.223043 4_1:+20805699 None:intergenic
TACTCATTATTATCCTCTTT+TGG 0.232381 4_1:-20815145 None:intergenic
TGAACAAGGCAAGTTGTAAT+TGG 0.232879 4_1:+20814757 Msa0539660:three_prime_UTR
CACACCAGTATTGTTGTAAA+AGG 0.234711 4_1:-20813942 None:intergenic
TTTCTTTACTTGTTTGTGAT+TGG 0.239952 4_1:-20814682 None:intergenic
GCTGGTCAGCTTTCAGCATT+TGG 0.240700 4_1:+20806179 Msa0539660:CDS
CCTAAACAACCAACATTAAT+TGG 0.244538 4_1:-20809982 None:intergenic
ACGAGCATCCGGAAGCTTTC+CGG 0.246203 4_1:+20815656 Msa0539660:three_prime_UTR
GTTTCCACCAATGCATATTC+TGG 0.248708 4_1:+20816536 Msa0539660:three_prime_UTR
CAACGATAATTGCTATAAAT+TGG 0.258409 4_1:+20814347 Msa0539660:three_prime_UTR
ACGTTTGAATTTGTTTCATT+AGG 0.259098 4_1:+20805698 None:intergenic
TCCTAACAATGTTGAAATCT+TGG 0.261337 4_1:-20815724 None:intergenic
CTTCTCTTCACCACATTACT+TGG 0.264756 4_1:-20812418 None:intergenic
TGTTCTTTGGTCCCAGTAAA+AGG 0.269862 4_1:+20813738 Msa0539660:exon
CCTTCATAGGTAGCAAATTC+CGG 0.278494 4_1:+20815421 Msa0539660:three_prime_UTR
ATAAGCTCCTCGTTCCAAAT+AGG 0.279173 4_1:+20815807 Msa0539660:three_prime_UTR
TTCTTTACTTGTTTGTGATT+GGG 0.281409 4_1:-20814681 None:intergenic
TGACATTATGCGATGAAAAT+TGG 0.281887 4_1:+20814840 Msa0539660:three_prime_UTR
CATATTCTGGATTCTGCTTT+GGG 0.284632 4_1:+20816549 Msa0539660:three_prime_UTR
TCAAATCATTGTATCTGATT+TGG 0.286145 4_1:+20814246 Msa0539660:three_prime_UTR
AATAATAATGTTTGAGAGAA+AGG 0.291210 4_1:+20817596 Msa0539660:intron
TTCAAGTGCTCAAGGATAAA+AGG 0.293438 4_1:-20810656 None:intergenic
AACCCATTTGTTTCCATACT+TGG 0.294660 4_1:+20815362 Msa0539660:three_prime_UTR
CATTGATTGGCTCCGCTATC+AGG 0.304148 4_1:-20814977 None:intergenic
GATATTATATGTGGATTTCC+AGG 0.306757 4_1:+20810927 Msa0539660:CDS
GCATATTCTGGATTCTGCTT+TGG 0.308566 4_1:+20816548 Msa0539660:three_prime_UTR
GTGACAGTTGAGGACAAATT+TGG 0.316140 4_1:-20815747 None:intergenic
TTGCACAGCTTGGGTTAATA+TGG 0.320005 4_1:-20815064 None:intergenic
CCCAAGATTTCAACATTGTT+AGG 0.320279 4_1:+20815723 Msa0539660:three_prime_UTR
TCAAAGTTTATTTGAACATA+AGG 0.320567 4_1:+20817289 Msa0539660:three_prime_UTR
ATGGTTGGCAGTATCAATTC+AGG 0.324194 4_1:+20814706 Msa0539660:three_prime_UTR
CTTGTTTGAGTTTCAACTCT+TGG 0.324264 4_1:+20816620 Msa0539660:three_prime_UTR
TTCCCACAAGCACACGATTC+TGG 0.337619 4_1:-20813436 None:intergenic
CTGGTGTGGTATACAATAAC+TGG 0.337925 4_1:+20813957 Msa0539660:three_prime_UTR
GCATACTGTGTTGCCAAGTA+TGG 0.338450 4_1:-20815375 None:intergenic
TTCCAATTCTCTGATCTTTG+TGG 0.338538 4_1:+20815211 Msa0539660:three_prime_UTR
ATCTGCATTAACATAACATT+TGG 0.343336 4_1:+20816572 Msa0539660:three_prime_UTR
AAATTTGCACCATGATTAAC+AGG 0.344244 4_1:+20816659 Msa0539660:three_prime_UTR
GAGTTCCACAAGCTTCTGTT+AGG 0.347484 4_1:-20815887 None:intergenic
GAATTGGAAAGGTGAGAATA+AGG 0.347930 4_1:-20815197 None:intergenic
CTAAATAAAATTCAGAATTT+GGG 0.349816 4_1:+20814045 Msa0539660:three_prime_UTR
TGTAAAGGAATTTCCTCATC+AGG 0.351220 4_1:+20816887 Msa0539660:three_prime_UTR
CTGGTCAGCTTTCAGCATTT+GGG 0.353842 4_1:+20806180 Msa0539660:CDS
TCATCATCTTCTCACTGATC+TGG 0.354260 4_1:-20814396 None:intergenic
TTCTGAGATTTCACAAGTCT+TGG 0.354694 4_1:-20813410 None:intergenic
ACCTGCGGCAAGAATGAAAA+AGG 0.355796 4_1:+20812393 Msa0539660:CDS
ACTTGTTTGTGATTGGGATT+TGG 0.356204 4_1:-20814675 None:intergenic
TGTGGAGGAGGGTGAGAATT+AGG 0.359962 4_1:+20816956 Msa0539660:three_prime_UTR
TGATTGGGATTTGGAATTAC+CGG 0.361185 4_1:-20814666 None:intergenic
CTGATGGAGTTAAAGAAATA+TGG 0.362385 4_1:+20810318 Msa0539660:CDS
TTTCCTTCCATCCCAGAGTA+TGG 0.369353 4_1:-20812478 None:intergenic
GGATTTGGAATTACCGGTTC+CGG 0.369744 4_1:-20814660 None:intergenic
AGTGATTGAAGCTCAAGATT+TGG 0.370365 4_1:-20815928 None:intergenic
AGTTTGTCATCCAGATGAAT+TGG 0.372417 4_1:-20814593 None:intergenic
GATTTGGTTCCTCATGATAA+AGG 0.374508 4_1:-20815912 None:intergenic
GACCACAAAGATCAGAGAAT+TGG 0.375978 4_1:-20815213 None:intergenic
CTGAACTGGCACATGCAAAA+AGG 0.379014 4_1:-20810717 None:intergenic
GTAGATTCAGATTCAGATAT+AGG 0.379914 4_1:+20817070 Msa0539660:three_prime_UTR
CCAAGTTTCACTTCCACATA+AGG 0.380141 4_1:+20816365 Msa0539660:three_prime_UTR
CTGGAAGGGATCAGCATTGT+AGG 0.383351 4_1:+20809701 Msa0539660:CDS
GTGGATTCCTTGGCCGGAAC+CGG 0.384013 4_1:+20814647 Msa0539660:three_prime_UTR
CACTTTGTATGTCAAAACTT+TGG 0.385625 4_1:-20813808 None:intergenic
ATCCTGATGAAGCAGATCTA+TGG 0.386251 4_1:+20806219 Msa0539660:CDS
ATCTTAATGAAGTGCCGGTT+AGG 0.389058 4_1:-20816178 None:intergenic
AACAATAATAATTCCACAAC+AGG 0.391991 4_1:+20814195 Msa0539660:three_prime_UTR
AGCTGGTAATTCTGCTACTA+AGG 0.395120 4_1:-20810594 None:intergenic
CAAAGACAGTTGTCAATTCA+CGG 0.396089 4_1:-20812444 None:intergenic
AAAGGAAGAATCTGCACAAA+AGG 0.397088 4_1:+20813572 Msa0539660:CDS
GAATCGTTCACGCCATACTC+TGG 0.398918 4_1:+20812466 Msa0539660:CDS
CTACCATCTTTGCCCTTCAT+AGG 0.399165 4_1:+20815408 Msa0539660:three_prime_UTR
GTTGTAGAGGAGACTTTAAA+AGG 0.399227 4_1:+20809752 Msa0539660:CDS
AAGAAAGGAGCGTGAGAAAG+TGG 0.400869 4_1:+20813632 Msa0539660:CDS
ATTGGAGACCGGAAAGCTTC+CGG 0.401323 4_1:-20815664 None:intergenic
CAAAGTTTATTTGAACATAA+GGG 0.401524 4_1:+20817290 Msa0539660:three_prime_UTR
GCAGCTAGGTTGAGGTATAA+AGG 0.402038 4_1:-20816500 None:intergenic
ACCTTAACTGAGCTTGTGCC+GGG 0.402416 4_1:+20810888 Msa0539660:CDS
TGAGGTTTACTTGCACAGCT+TGG 0.403193 4_1:-20815074 None:intergenic
TAAGCTCCTCGTTCCAAATA+GGG 0.405460 4_1:+20815808 Msa0539660:three_prime_UTR
GGCTCCTCAGTGGTATAGAT+TGG 0.406615 4_1:-20816135 None:intergenic
CTAAATCTCCAACCACAGTT+TGG 0.407369 4_1:+20814482 Msa0539660:three_prime_UTR
CCTTCCCACAGATGTTATCT+TGG 0.407575 4_1:-20813278 None:intergenic
AGCCAATCAATGTGTCTAAC+AGG 0.409018 4_1:+20814988 Msa0539660:three_prime_UTR
GAGGTATAAAGGAGGGAATA+AGG 0.409912 4_1:-20816489 None:intergenic
GAGGTTTACTTGCACAGCTT+GGG 0.411394 4_1:-20815073 None:intergenic
ACAGAGTGATAGTGAATATA+TGG 0.412525 4_1:+20806157 Msa0539660:intron
CTATCCGGCGGAACCCTAAC+CGG 0.413279 4_1:+20816164 Msa0539660:three_prime_UTR
AGATTTCACAAGTCTTGGTT+TGG 0.413329 4_1:-20813405 None:intergenic
AACCTCTTGAAGAAATTAAC+TGG 0.413459 4_1:+20814274 Msa0539660:three_prime_UTR
TTTGAATGAGAAGGCTAAGT+TGG 0.413887 4_1:+20817416 Msa0539660:three_prime_UTR
CAACAACACGATCAATTTGC+TGG 0.415734 4_1:-20809727 None:intergenic
AAGCGCTGGCAATGTCTTAC+GGG 0.416449 4_1:-20809795 None:intergenic
CCGGAATTTGCTACCTATGA+AGG 0.416546 4_1:-20815421 None:intergenic
TACCTGTTAGACACATTGAT+TGG 0.416771 4_1:-20814990 None:intergenic
GTATACTGCTCATTCCATCT+AGG 0.418342 4_1:+20815309 Msa0539660:three_prime_UTR
TTCATAGACCTAGTGCGGTC+GGG 0.419260 4_1:-20815623 None:intergenic
AATAAACCACTAGTTGTTGC+TGG 0.419430 4_1:+20809644 Msa0539660:CDS
CTTCATAGGTAGCAAATTCC+GGG 0.419673 4_1:+20815422 Msa0539660:three_prime_UTR
CAAGCGCTGGCAATGTCTTA+CGG 0.420275 4_1:-20809796 None:intergenic
GAACAAGGCAAGTTGTAATT+GGG 0.420619 4_1:+20814758 Msa0539660:three_prime_UTR
GTGAAATTATGCTTGCTGTT+TGG 0.421078 4_1:-20816082 None:intergenic
CCTAACAATGTTGAAATCTT+GGG 0.421281 4_1:-20815723 None:intergenic
AGCGGCTACCGGAGCTCCAC+CGG 0.422571 4_1:+20805792 Msa0539660:CDS
CGATCTTTCTTCACCTGTTG+TGG 0.423642 4_1:-20814208 None:intergenic
ATAAGAATCAGCATCCTGTT+TGG 0.424122 4_1:-20816313 None:intergenic
ACTAAGGCATTCAATAAAGT+TGG 0.424272 4_1:-20810578 None:intergenic
GGTTCCGCCGGATAGTCCTT+TGG 0.424308 4_1:-20816156 None:intergenic
GAAGGCTAAGTTGGAGTTGG+AGG 0.425327 4_1:+20817425 Msa0539660:three_prime_UTR
TCCATGTGGGGTGGATTCCT+TGG 0.425380 4_1:+20814637 Msa0539660:three_prime_UTR
AAAAGCAATTACAAGCATAA+AGG 0.428482 4_1:+20814005 Msa0539660:three_prime_UTR
AGCCATAGATCTGCTTCATC+AGG 0.432713 4_1:-20806221 None:intergenic
AATTCCTCATCCAATTCATC+TGG 0.433329 4_1:+20814583 Msa0539660:three_prime_UTR
CCCCGGCACAAGCTCAGTTA+AGG 0.435890 4_1:-20810889 None:intergenic
AGCATAGTGCTTGCATCAGC+TGG 0.438177 4_1:-20810611 None:intergenic
TCTTCCTCCCCGACCGCACT+AGG 0.438943 4_1:+20815615 Msa0539660:three_prime_UTR
GCAAAGATTTGCTTCCAAAC+AGG 0.440169 4_1:+20816299 Msa0539660:three_prime_UTR
TTGAGAAGACCGACAGTTCA+AGG 0.440288 4_1:+20813488 Msa0539660:CDS
GAGAAATGTTCCGCAAAGAT+TGG 0.442111 4_1:-20815682 None:intergenic
CTCCTCAAGTGTTTCGAAGA+CGG 0.443339 4_1:+20815483 Msa0539660:three_prime_UTR
AGGGTTGATTATGCAAAATC+AGG 0.443775 4_1:-20816599 None:intergenic
AGTAACCTTATTCCAAAAGA+TGG 0.444301 4_1:-20817328 None:intergenic
CTTCCTGTGATGGATATAAC+AGG 0.444787 4_1:-20816398 None:intergenic
CAAGTTTCACTTCCACATAA+GGG 0.444872 4_1:+20816366 Msa0539660:three_prime_UTR
CTTGTGAATGTTGTGGAGGA+GGG 0.445456 4_1:+20816945 Msa0539660:three_prime_UTR
ACCTGAGTGCCAGGGATTGA+GGG 0.446842 4_1:-20805898 None:intergenic
GCAGAAGCAGGAGCAGGAGC+AGG 0.447720 4_1:+20816689 Msa0539660:three_prime_UTR
CTCCGAATTTGTCTTGAGGC+AGG 0.448291 4_1:-20815552 None:intergenic
TTGCAAGACAAAACATGCTC+GGG 0.450430 4_1:+20810017 Msa0539660:CDS
AGATGAAGAACCTGAGTGCC+AGG 0.450677 4_1:-20805907 None:intergenic
TTCTCCTTAGACTCCACATA+TGG 0.451473 4_1:+20814869 Msa0539660:three_prime_UTR
TTGCATGTGCCAGTTCAGTC+TGG 0.452847 4_1:+20810722 Msa0539660:CDS
ATTACCATATGTGGAGTCTA+AGG 0.455668 4_1:-20814873 None:intergenic
TTTCCGGTCTCCAATCTTTG+CGG 0.458718 4_1:+20815672 Msa0539660:three_prime_UTR
TGAGAAGGCTAAGTTGGAGT+TGG 0.459212 4_1:+20817422 Msa0539660:three_prime_UTR
CATCATCTTCTCACTGATCT+GGG 0.460565 4_1:-20814395 None:intergenic
GCTTGTGAATGTTGTGGAGG+AGG 0.463112 4_1:+20816944 Msa0539660:three_prime_UTR
GAACGAGGAGCTTATGTTTG+TGG 0.463949 4_1:-20815799 None:intergenic
ACTCTAAGATAATAAAGCTT+AGG 0.464605 4_1:+20815954 Msa0539660:three_prime_UTR
TCTTCATGCTGCGTCATCCT+CGG 0.465845 4_1:-20814321 None:intergenic
TCACATCTCGACTTCCTTGA+GGG 0.467101 4_1:-20809673 None:intergenic
ATATCAGCAGGTCTTGTAGT+TGG 0.468121 4_1:+20814550 Msa0539660:three_prime_UTR
TTGACACACTGTCCCCTAGA+TGG 0.468348 4_1:-20815323 None:intergenic
ATTGCCACTGATATTATATG+TGG 0.470214 4_1:+20810918 Msa0539660:CDS
AGTGAAGATACCGGAGCATA+TGG 0.472936 4_1:+20810347 Msa0539660:CDS
TACCTTAACTGAGCTTGTGC+CGG 0.473023 4_1:+20810887 Msa0539660:CDS
ACATTGGATATCTCGAACTC+GGG 0.475864 4_1:-20815455 None:intergenic
TCTTAATGAAGTGCCGGTTA+GGG 0.476718 4_1:-20816177 None:intergenic
AACCTGAGTGCCAGGGATTG+AGG 0.477840 4_1:-20805899 None:intergenic
GGAAAAGCAGAAGCAGGAGC+AGG 0.478862 4_1:+20816683 Msa0539660:three_prime_UTR
GGAAGAAACGGAGAGAAAGA+AGG 0.480058 4_1:-20815598 None:intergenic
ATGGATACCATCATAACAAA+AGG 0.483104 4_1:+20809611 Msa0539660:CDS
CTCTGGGATGGAAGGAAAAG+TGG 0.483689 4_1:+20812483 Msa0539660:CDS
ACGGAATCCCGGTGGAGCTC+CGG 0.484772 4_1:-20805800 None:intergenic
CTTATTCCAAAAGATGGAAA+AGG 0.486686 4_1:-20817322 None:intergenic
CATTCTCATGGTCATGGTCA+TGG 0.489256 4_1:-20816725 None:intergenic
TGCATTAACATAACATTTGG+AGG 0.489849 4_1:+20816575 Msa0539660:three_prime_UTR
AGAGAAAGGAATGGTAACTT+TGG 0.490193 4_1:+20817610 Msa0539660:three_prime_UTR
TGAGGAGCCAAAGGACTATC+CGG 0.491599 4_1:+20816149 Msa0539660:three_prime_UTR
GCATCACTTCCAGACTGAAC+TGG 0.492471 4_1:-20810731 None:intergenic
TTGGATGGATACCGAGGAAA+AGG 0.495045 4_1:+20813554 Msa0539660:CDS
GCAAGCACTATGCTGCGTAT+TGG 0.495273 4_1:+20810620 Msa0539660:CDS
TGCGGTCGGGGAGGAAGAAA+CGG 0.495420 4_1:-20815610 None:intergenic
TATACTGCTCATTCCATCTA+GGG 0.496045 4_1:+20815310 Msa0539660:three_prime_UTR
TACCAGTTAATTTCTTCAAG+AGG 0.497146 4_1:-20814276 None:intergenic
CTACCTATGAAGGGCAAAGA+TGG 0.497187 4_1:-20815411 None:intergenic
CCCAAATGAAAAGAGGGTAT+AGG 0.497378 4_1:-20814130 None:intergenic
GATCTGATCTAAAGCAAGAA+AGG 0.497761 4_1:+20813617 Msa0539660:CDS
CACCACTTGCAGCTAGGTTG+AGG 0.497949 4_1:-20816508 None:intergenic
CGAGTCTCTCCAACTCAGTA+AGG 0.499904 4_1:+20814435 Msa0539660:three_prime_UTR
GAGGGTGAGAATTAGGTGTA+GGG 0.500614 4_1:+20816963 Msa0539660:three_prime_UTR
CTGAAGGTTGGTCATACAAA+GGG 0.500724 4_1:+20813199 Msa0539660:intron
TACCCTCTTGAACATTCAAA+AGG 0.500847 4_1:-20817037 None:intergenic
GAGCCAGAATCGTGTGCTTG+TGG 0.502756 4_1:+20813433 Msa0539660:CDS
CATGGTCATGGTCATGGTCA+TGG 0.503618 4_1:-20816719 None:intergenic
TTGCCAAGTATGGAAACAAA+TGG 0.503643 4_1:-20815365 None:intergenic
AATTATGCTTGCTGTTTGGA+TGG 0.504180 4_1:-20816078 None:intergenic
TCGCATAATGTCACTACTCT+CGG 0.504638 4_1:-20814830 None:intergenic
ACAATTATAATATCCTCAAA+AGG 0.505624 4_1:+20815768 Msa0539660:three_prime_UTR
TGTGGGGTGGATTCCTTGGC+CGG 0.505865 4_1:+20814641 Msa0539660:three_prime_UTR
GAGCTCAAGCCTTACTGAGT+TGG 0.507378 4_1:-20814444 None:intergenic
TTAGTGTTGATTTCTTGTAA+AGG 0.509202 4_1:+20816872 Msa0539660:three_prime_UTR
CTCAAGGATAAAAGGTGGAT+TGG 0.509294 4_1:-20810648 None:intergenic
GGAATTTCCTCATCAGGGTC+AGG 0.510359 4_1:+20816893 Msa0539660:three_prime_UTR
TTCACATCTCGACTTCCTTG+AGG 0.511443 4_1:-20809674 None:intergenic
TTGCTCATCGGAGCGGCTAC+CGG 0.511611 4_1:+20805781 Msa0539660:CDS
AGATTGAACCAACGAGCATC+CGG 0.511725 4_1:+20815645 Msa0539660:three_prime_UTR
GATAACGGAGAACGGAATCC+CGG 0.513346 4_1:-20805811 None:intergenic
GGAGGGTGAGAATTAGGTGT+AGG 0.513611 4_1:+20816962 Msa0539660:three_prime_UTR
TGCATCTGATGGAGTTCACT+TGG 0.514509 4_1:+20812528 Msa0539660:CDS
CCGACGGTGACGGAGGATAA+CGG 0.516566 4_1:-20805826 None:intergenic
GAACTTCCAAGCATATCGTC+TGG 0.516593 4_1:-20813247 None:intergenic
ATTACTGATATTGCATCTGA+TGG 0.517009 4_1:+20812517 Msa0539660:CDS
TGTGGTCACTGCTACCATTG+AGG 0.518823 4_1:+20815229 Msa0539660:three_prime_UTR
TAATGTTTGAGAGAAAGAAA+AGG 0.519078 4_1:+20817464 Msa0539660:three_prime_UTR
ACCCTCAATCCCTGGCACTC+AGG 0.519158 4_1:+20805897 Msa0539660:CDS
TACAATCAAGATGAACAGAT+TGG 0.519351 4_1:-20817371 None:intergenic
GTATCCATGGCAGATTGACT+TGG 0.520909 4_1:-20809596 None:intergenic
GCATCAGAATGCCATGCCTC+AGG 0.521107 4_1:+20816032 Msa0539660:three_prime_UTR
CGTTGCAACGCCGACGGTGA+CGG 0.522221 4_1:-20805836 None:intergenic
CGCATAATGTCACTACTCTC+GGG 0.522301 4_1:-20814829 None:intergenic
AGCCAGAATCGTGTGCTTGT+GGG 0.522905 4_1:+20813434 Msa0539660:CDS
TATCCATGGCAGATTGACTT+GGG 0.524481 4_1:-20809595 None:intergenic
CTCATTCGAACAATATCAGC+AGG 0.525290 4_1:+20814538 Msa0539660:three_prime_UTR
TTTACTTGAAGTTACTGTGA+AGG 0.525641 4_1:-20816249 None:intergenic
GAACAAGCAGGTTCCTACTC+AGG 0.526141 4_1:+20813360 Msa0539660:CDS
AGCAAAAGAACTTCCTGTGA+TGG 0.526165 4_1:-20816408 None:intergenic
AATCGTTCACGCCATACTCT+GGG 0.527851 4_1:+20812467 Msa0539660:CDS
AACTCGGGATACTTAGTGCC+CGG 0.528434 4_1:-20815440 None:intergenic
CAAGATGAACAGATTGGTGG+TGG 0.528684 4_1:-20817365 None:intergenic
GGAATTACCGGTTCCGGCCA+AGG 0.528999 4_1:-20814654 None:intergenic
TTTGACAATCACCACCTCAA+TGG 0.529571 4_1:-20815243 None:intergenic
CCGTTATCCTCCGTCACCGT+CGG 0.532290 4_1:+20805826 Msa0539660:CDS
TGCCAAGTATGGAAACAAAT+GGG 0.532532 4_1:-20815364 None:intergenic
AAGTCGAGATGTGAAAGAGC+TGG 0.532706 4_1:+20809682 Msa0539660:CDS
GCTCACAAAACAGTTGAAGT+TGG 0.535491 4_1:-20817172 None:intergenic
AACATTGGATATCTCGAACT+CGG 0.535580 4_1:-20815456 None:intergenic
AAAGGGATGAAGATAAATCA+TGG 0.536402 4_1:-20816104 None:intergenic
TCATAGACCTAGTGCGGTCG+GGG 0.537726 4_1:-20815622 None:intergenic
GACATTGAAGATTTGCTCAT+CGG 0.539895 4_1:+20805769 Msa0539660:CDS
CAATAAAGCTTTGAACAAGC+AGG 0.540064 4_1:+20813348 Msa0539660:CDS
CCTTATGTGGAAGTGAAACT+TGG 0.541605 4_1:-20816365 None:intergenic
GTTTATTTGAACATAAGGGT+TGG 0.541666 4_1:+20817294 Msa0539660:three_prime_UTR
ACCCTGCCTCAAGACAAATT+CGG 0.542105 4_1:+20815550 Msa0539660:three_prime_UTR
ACACCTTCACCCTCAATCCC+TGG 0.542316 4_1:+20805889 Msa0539660:CDS
AGCCGTCTTCGAAACACTTG+AGG 0.542502 4_1:-20815485 None:intergenic
GTTTGATCTTAATGAAGTGC+CGG 0.542712 4_1:-20816183 None:intergenic
CAATTTATAGCAATTATCGT+TGG 0.542924 4_1:-20814346 None:intergenic
CATTACACCCAAATGAAAAG+AGG 0.543352 4_1:-20814137 None:intergenic
CTTTAAAAGGTCACGAAGTG+AGG 0.543654 4_1:+20809765 Msa0539660:CDS
ATAATTGCTATAAATTGGAA+TGG 0.544664 4_1:+20814352 Msa0539660:three_prime_UTR
CTTCATAGACCTAGTGCGGT+CGG 0.545411 4_1:-20815624 None:intergenic
TTGAGCTCTTTCGCCTTGAG+TGG 0.546564 4_1:+20814459 Msa0539660:three_prime_UTR
CTATCTCTTTCAAGTGCTCA+AGG 0.546786 4_1:-20810664 None:intergenic
TTAGGTTGAAGAACCAAAAG+AGG 0.547365 4_1:+20815132 Msa0539660:three_prime_UTR
TCCTCAGTGGTATAGATTGG+AGG 0.548476 4_1:-20816132 None:intergenic
TACAGTGTCCCTTGAACTGT+CGG 0.549556 4_1:-20813497 None:intergenic
CCTTCTCATTCTCATGGTCA+TGG 0.551942 4_1:-20816731 None:intergenic
AGTTCCACAAGCTTCTGTTA+GGG 0.553072 4_1:-20815886 None:intergenic
TCATCCAGATGAATTGGATG+AGG 0.553450 4_1:-20814587 None:intergenic
AGGAAGTCTTGACCCTTATG+TGG 0.554282 4_1:-20816378 None:intergenic
GGTAGAGTCCAAACTGTGGT+TGG 0.554358 4_1:-20814490 None:intergenic
GTAGAAAGTGAACTTGCCTC+AGG 0.554829 4_1:+20813595 Msa0539660:CDS
CTTCCTGTTATATCCATCAC+AGG 0.554956 4_1:+20816395 Msa0539660:three_prime_UTR
GCCAAGGAATCCACCCCACA+TGG 0.555721 4_1:-20814638 None:intergenic
CATGGATGCTAGGCTTTCAC+AGG 0.556002 4_1:-20814620 None:intergenic
ATCATTGTATCTGATTTGGA+AGG 0.556420 4_1:+20814250 Msa0539660:three_prime_UTR
GGCTTAACGACATTTGCACT+TGG 0.556646 4_1:-20814786 None:intergenic
TCAATGTGTCTAACAGGTAT+CGG 0.558957 4_1:+20814994 Msa0539660:three_prime_UTR
TCCGAATTTGTCTTGAGGCA+GGG 0.560189 4_1:-20815551 None:intergenic
ACAGGAGGAAAAGCAGAAGC+AGG 0.560238 4_1:+20816677 Msa0539660:three_prime_UTR
AAGAAATTAACTGGTACTGA+TGG 0.561021 4_1:+20814283 Msa0539660:three_prime_UTR
AACATGCTCGGGGTCACCTA+GGG 0.562046 4_1:+20810028 Msa0539660:CDS
GAGATTCTTCCAATTAATGT+TGG 0.562618 4_1:+20809973 Msa0539660:CDS
TTTGAATTCACACCTTTGGA+AGG 0.563205 4_1:-20809820 None:intergenic
CCTTGCTGCCACAATCTGCA+TGG 0.563384 4_1:+20814954 Msa0539660:three_prime_UTR
TATGCTTGGAAGTTCAGCTC+TGG 0.564349 4_1:+20813255 Msa0539660:CDS
ATTGCTCCAGACGATATGCT+TGG 0.564402 4_1:+20813241 Msa0539660:CDS
AAGGAAGAATCTGCACAAAA+GGG 0.564610 4_1:+20813573 Msa0539660:CDS
AAAGAATGGAGAGCTGCACT+TGG 0.565426 4_1:-20815100 None:intergenic
ACCTTTGGAAGGTCAAGCGC+TGG 0.566270 4_1:-20809809 None:intergenic
ATCCACCCCACATGGATGCT+AGG 0.566521 4_1:-20814630 None:intergenic
GTTGCTGGCTGTGTCCCTCA+AGG 0.566523 4_1:+20809659 Msa0539660:CDS
GAATCCAGAATATGCATTGG+TGG 0.567312 4_1:-20816540 None:intergenic
GAAAGCTTCCGGATGCTCGT+TGG 0.567546 4_1:-20815653 None:intergenic
CTATCAGGCCATGCAGATTG+TGG 0.567929 4_1:-20814962 None:intergenic
CAGCTCCACCACTTGCAGCT+AGG 0.568046 4_1:-20816514 None:intergenic
TATCGATTGTGTAACTCCCT+AGG 0.570012 4_1:-20810044 None:intergenic
TACGACAGATTGAGAAGTGT+GGG 0.570803 4_1:-20814514 None:intergenic
ACAAGGGTTTCTCAAATGAG+AGG 0.571760 4_1:-20815837 None:intergenic
GTTGGAGATTTAGCCACTCA+AGG 0.572360 4_1:-20814472 None:intergenic
GTAAAATCTGTGGTATCTGA+TGG 0.573159 4_1:+20810302 Msa0539660:CDS
AAACATGCTCGGGGTCACCT+AGG 0.574559 4_1:+20810027 Msa0539660:CDS
ACGCCATACTCTGGGATGGA+AGG 0.574848 4_1:+20812475 Msa0539660:CDS
CGAGATGTGAAAGAGCTGGA+AGG 0.575668 4_1:+20809686 Msa0539660:CDS
TCAGTGGCAATCTGCATCCC+CGG 0.575983 4_1:-20810906 None:intergenic
TTAGAAATTACCATATGCTC+CGG 0.576298 4_1:-20810357 None:intergenic
ATTGCAAGACAAAACATGCT+CGG 0.578759 4_1:+20810016 Msa0539660:CDS
CAATGTTGAAATCTTGGGAA+GGG 0.579041 4_1:-20815718 None:intergenic
CTTCTTCGTTGCAACGCCGA+CGG 0.580514 4_1:-20805842 None:intergenic
ATTTGGATGTTCTCATAACC+AGG 0.580770 4_1:+20806023 Msa0539660:CDS
AACATCTGTGGGAAGGTGGT+CGG 0.581474 4_1:+20813285 Msa0539660:CDS
ATTATGCTTGCTGTTTGGAT+GGG 0.582370 4_1:-20816077 None:intergenic
AAGGCTAAGTTGGAGTTGGA+GGG 0.583930 4_1:+20817426 Msa0539660:three_prime_UTR
CTATACCACTGAGGAGCCAA+AGG 0.584006 4_1:+20816140 Msa0539660:three_prime_UTR
AGAGAAGACATTTCCTGAGT+AGG 0.584226 4_1:-20813373 None:intergenic
TGGTTGGCAGTATCAATTCA+GGG 0.584676 4_1:+20814707 Msa0539660:three_prime_UTR
GATGGAATGAGCAGTATACA+TGG 0.585191 4_1:-20815305 None:intergenic
GTAAAGGAATTTCCTCATCA+GGG 0.585924 4_1:+20816888 Msa0539660:three_prime_UTR
GGCAGTTTGCTTCGAAACCG+AGG 0.586541 4_1:+20814304 Msa0539660:three_prime_UTR
AGTGATAGTGAATATATGGC+TGG 0.587060 4_1:+20806161 Msa0539660:CDS
CAAGAGTTGAAACTCAAACA+AGG 0.587219 4_1:-20816619 None:intergenic
GTCCCCAAGTCAATCTGCCA+TGG 0.587573 4_1:+20809592 Msa0539660:CDS
CTGCTGATATTGTTCGAATG+AGG 0.587966 4_1:-20814537 None:intergenic
CGGAATTTGCTACCTATGAA+GGG 0.588456 4_1:-20815420 None:intergenic
GCGGCTACCGGAGCTCCACC+GGG 0.589232 4_1:+20805793 Msa0539660:CDS
GGAACTCTTCCTTTATCATG+AGG 0.590334 4_1:+20815903 Msa0539660:three_prime_UTR
AGAAAGGAGCGTGAGAAAGT+GGG 0.591185 4_1:+20813633 Msa0539660:CDS
CTTTAACCCTATTTGGAACG+AGG 0.591388 4_1:-20815814 None:intergenic
CCAGATCACACACCTGGTCG+AGG 0.591497 4_1:-20811394 None:intergenic
GAGATGTGAAAGAGCTGGAA+GGG 0.591544 4_1:+20809687 Msa0539660:CDS
CCATGCAGATTGTGGCAGCA+AGG 0.592875 4_1:-20814954 None:intergenic
CCTTCGATCGCGTATTCGAG+AGG 0.593012 4_1:+20815988 Msa0539660:three_prime_UTR
ATTACACCCAAATGAAAAGA+GGG 0.593806 4_1:-20814136 None:intergenic
GGGATTGAGGGTGAAGGTGT+AGG 0.595042 4_1:-20805886 None:intergenic
TTTGCTTGTGAATGTTGTGG+AGG 0.598761 4_1:+20816941 Msa0539660:three_prime_UTR
AGGGTGAGAATTAGGTGTAG+GGG 0.599423 4_1:+20816964 Msa0539660:three_prime_UTR
CTAACTGTGATCACAGTGCA+TGG 0.599529 4_1:+20815270 Msa0539660:three_prime_UTR
CAAAGATCAGAGAATTGGAA+AGG 0.600718 4_1:-20815208 None:intergenic
TGAGAAGACCGACAGTTCAA+GGG 0.600899 4_1:+20813489 Msa0539660:CDS
TATTATAATTGTGACAGTTG+AGG 0.601359 4_1:-20815757 None:intergenic
TCAACTGATTCACGTCGAAG+TGG 0.602308 4_1:+20814913 Msa0539660:three_prime_UTR
GAGGATGACGCAGCATGAAG+AGG 0.602969 4_1:+20814323 Msa0539660:three_prime_UTR
GTGAAACTTGGTAACTACAA+AGG 0.604614 4_1:-20816353 None:intergenic
CTGGCCAAGATAACATCTGT+GGG 0.605676 4_1:+20813274 Msa0539660:CDS
TAATTACTGGTGCAGTTGCA+CGG 0.605718 4_1:+20809565 Msa0539660:intron
CCTCTCGAATACGCGATCGA+AGG 0.607582 4_1:-20815988 None:intergenic
AGCCTAGCATCCATGTGGGG+TGG 0.607689 4_1:+20814628 Msa0539660:three_prime_UTR
ACAATGTTGAAATCTTGGGA+AGG 0.608947 4_1:-20815719 None:intergenic
ATTTGTTTGGATGGATACCG+AGG 0.609593 4_1:+20813548 Msa0539660:CDS
AAGTGCTCAAGGATAAAAGG+TGG 0.609787 4_1:-20810653 None:intergenic
AATCAAGATGAACAGATTGG+TGG 0.611206 4_1:-20817368 None:intergenic
GGGTGAGAATTAGGTGTAGG+GGG 0.611858 4_1:+20816965 Msa0539660:three_prime_UTR
CTCAACCTAGCTGCAAGTGG+TGG 0.612125 4_1:+20816509 Msa0539660:three_prime_UTR
GCAGAATCCAGAATATGCAT+TGG 0.615456 4_1:-20816543 None:intergenic
GATGAAGAACCTGAGTGCCA+GGG 0.615482 4_1:-20805906 None:intergenic
GTTCCGCAAAGATTGGAGAC+CGG 0.616738 4_1:-20815675 None:intergenic
GCTGAAGGTTGGTCATACAA+AGG 0.618455 4_1:+20813198 Msa0539660:intron
CGTCTTCGAAACACTTGAGG+AGG 0.619793 4_1:-20815482 None:intergenic
CAATCTGCATGGCCTGATAG+CGG 0.622267 4_1:+20814965 Msa0539660:three_prime_UTR
GTTCACGCCATACTCTGGGA+TGG 0.622388 4_1:+20812471 Msa0539660:CDS
TTGCTTTAGATCAGATCCTG+AGG 0.623187 4_1:-20813611 None:intergenic
AGATAACATCTGTGGGAAGG+TGG 0.623631 4_1:+20813281 Msa0539660:CDS
TACTGAGTTGGAGAGACTCG+AGG 0.624268 4_1:-20814432 None:intergenic
TCGTGTTGTTGAAGTTGTAG+AGG 0.625042 4_1:+20809739 Msa0539660:CDS
CCATGACCATGAGAATGAGA+AGG 0.625451 4_1:+20816731 Msa0539660:three_prime_UTR
CCAAGATAACATCTGTGGGA+AGG 0.625892 4_1:+20813278 Msa0539660:CDS
GAGAGCTGCACTTGGCTGTG+AGG 0.625943 4_1:-20815092 None:intergenic
TCTGGCCAAGATAACATCTG+TGG 0.625993 4_1:+20813273 Msa0539660:CDS
TACCTCAACCTAGCTGCAAG+TGG 0.626178 4_1:+20816506 Msa0539660:three_prime_UTR
GCACTTGAAAGAGATAGCAG+AGG 0.626453 4_1:+20810670 Msa0539660:CDS
TGCAACGCCGACGGTGACGG+AGG 0.628549 4_1:-20805833 None:intergenic
ATTTGAGCCTGACCCTGATG+AGG 0.628701 4_1:-20816900 None:intergenic
GCCAGCGCTTGACCTTCCAA+AGG 0.629616 4_1:+20809808 Msa0539660:CDS
AAGAGTTGAAACTCAAACAA+GGG 0.629617 4_1:-20816618 None:intergenic
AAATCCACATATAATATCAG+TGG 0.631794 4_1:-20810922 None:intergenic
TCATCTCCGAATTTGTCTTG+AGG 0.633898 4_1:-20815556 None:intergenic
ACACAGCCAGCAACAACTAG+TGG 0.634478 4_1:-20809650 None:intergenic
TGGCTGAGCAGTGAAGATAC+CGG 0.637316 4_1:+20810338 Msa0539660:CDS
AGTTGAGTATATGCTTGATG+TGG 0.638952 4_1:-20814896 None:intergenic
ACTGAGTTGGAGAGACTCGA+GGG 0.639057 4_1:-20814431 None:intergenic
AGTGCCGGTTAGGGTTCCGC+CGG 0.639109 4_1:-20816168 None:intergenic
TGAAGATTTGCTCATCGGAG+CGG 0.641134 4_1:+20805774 Msa0539660:CDS
CTTGGGAAGGGAGATTATGT+CGG 0.642034 4_1:-20815706 None:intergenic
ATGAATCGAGAATATACTGT+GGG 0.644518 4_1:+20810843 Msa0539660:CDS
GCTTCTGTTAGGGTTCAGCT+AGG 0.645640 4_1:-20815876 None:intergenic
TGACGGAGGATAACGGAGAA+CGG 0.645730 4_1:-20805819 None:intergenic
TGTCTTACAGGTCGTGACAT+TGG 0.648547 4_1:+20810545 Msa0539660:intron
GTACGACAGATTGAGAAGTG+TGG 0.649017 4_1:-20814515 None:intergenic
TTTGCACCATGATTAACAGG+AGG 0.653040 4_1:+20816662 Msa0539660:three_prime_UTR
GAAGTCAGATGAGATTCACA+AGG 0.656489 4_1:-20815854 None:intergenic
TAGACCTAGTGCGGTCGGGG+AGG 0.656681 4_1:-20815619 None:intergenic
TGAAAGCCTAGCATCCATGT+GGG 0.656949 4_1:+20814624 Msa0539660:three_prime_UTR
ATCCATGGCAGATTGACTTG+GGG 0.656976 4_1:-20809594 None:intergenic
CTAGGTTGAGGTATAAAGGA+GGG 0.657817 4_1:-20816496 None:intergenic
GTGAAAGCCTAGCATCCATG+TGG 0.660068 4_1:+20814623 Msa0539660:three_prime_UTR
GTGCCAGGGATTGAGGGTGA+AGG 0.660865 4_1:-20805892 None:intergenic
TAATGTTTGAGAGAAAGGAA+TGG 0.662001 4_1:+20817601 Msa0539660:three_prime_UTR
GTATAAAGGAGGGAATAAGG+TGG 0.662704 4_1:-20816486 None:intergenic
CAATCTTCATAGACCTAGTG+CGG 0.663360 4_1:-20815628 None:intergenic
TTGATGTGGATTACCATATG+TGG 0.664898 4_1:-20814882 None:intergenic
GCTAGGTTGAGGTATAAAGG+AGG 0.666305 4_1:-20816497 None:intergenic
GGTTGGGCGTGTAAAATCTG+TGG 0.669264 4_1:+20810292 Msa0539660:intron
ATAGTCCTTTGGCTCCTCAG+TGG 0.669744 4_1:-20816145 None:intergenic
CCTTAACTGAGCTTGTGCCG+GGG 0.671188 4_1:+20810889 Msa0539660:CDS
AAGTCAGATGAGATTCACAA+GGG 0.671394 4_1:-20815853 None:intergenic
ACTGATTCACGTCGAAGTGG+CGG 0.671903 4_1:+20814916 Msa0539660:three_prime_UTR
ATGGAATGAGCAGTATACAT+GGG 0.673909 4_1:-20815304 None:intergenic
AACGGAGAACGGAATCCCGG+TGG 0.683742 4_1:-20805808 None:intergenic
TGCAAGACAAAACATGCTCG+GGG 0.687262 4_1:+20810018 Msa0539660:CDS
GAATGAGCAGTATACATGGG+AGG 0.691843 4_1:-20815301 None:intergenic
GGTCACTGCTACCATTGAGG+TGG 0.693069 4_1:+20815232 Msa0539660:three_prime_UTR
ATACTGCTCATTCCATCTAG+GGG 0.694930 4_1:+20815311 Msa0539660:three_prime_UTR
TCAAGAACAAGACATGAACA+AGG 0.696192 4_1:+20814743 Msa0539660:three_prime_UTR
GACAGATTGAGAAGTGTGGG+AGG 0.712782 4_1:-20814511 None:intergenic
AATGAATCGAGAATATACTG+TGG 0.719912 4_1:+20810842 Msa0539660:CDS
AATCAACACTAACATAAACG+TGG 0.721111 4_1:-20816861 None:intergenic
TGAACCCTAACAGAAGCTTG+TGG 0.729603 4_1:+20815882 Msa0539660:three_prime_UTR
AAAACATGAAGCAAGATGTG+TGG 0.736383 4_1:-20813879 None:intergenic
GGAGCCAAAGGACTATCCGG+CGG 0.738578 4_1:+20816152 Msa0539660:three_prime_UTR
ATGAAGCAAGATGTGTGGTG+AGG 0.741401 4_1:-20813874 None:intergenic
TCCTCCAATCTATACCACTG+AGG 0.743340 4_1:+20816131 Msa0539660:three_prime_UTR
GAAAGCCTAGCATCCATGTG+GGG 0.755803 4_1:+20814625 Msa0539660:three_prime_UTR
AAAATGAATAGGGACACCTG+CGG 0.776532 4_1:+20812378 Msa0539660:intron
GGGAGGTAGAGTCCAAACTG+TGG 0.795354 4_1:-20814494 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATGAAATAGAAA+AGG - chr4_1:20805940-20805959 None:intergenic 10.0%
!! ATTAAATAACATAATACATA+TGG - chr4_1:20809890-20809909 None:intergenic 10.0%
!!! ATAAACATTTTTCTAATTTT+TGG + chr4_1:20811858-20811877 Msa0539660:intron 10.0%
!! ATATTAATGAAAAAATGAAT+AGG + chr4_1:20812367-20812386 Msa0539660:intron 10.0%
!! TATTAATGAAAAAATGAATA+GGG + chr4_1:20812368-20812387 Msa0539660:intron 10.0%
!! AAATATATTCCATTAATATT+AGG + chr4_1:20812600-20812619 Msa0539660:intron 10.0%
!!! TACTTTTTTTAAAATTTATC+TGG + chr4_1:20813772-20813791 Msa0539660:three_prime_UTR 10.0%
!!! ATAAACTTTTCATTAAAATA+AGG + chr4_1:20817223-20817242 Msa0539660:three_prime_UTR 10.0%
!!! AATTTTTATGAGATTTTTGT+TGG + chr4_1:20806289-20806308 Msa0539660:intron 15.0%
!! CATCAATAAAATAAAACAAT+AGG - chr4_1:20806723-20806742 None:intergenic 15.0%
!!! CTATTGTTTTATTTTATTGA+TGG + chr4_1:20806721-20806740 Msa0539660:intron 15.0%
!!! TGTGAATGTTTTTATTTTAT+TGG - chr4_1:20808160-20808179 None:intergenic 15.0%
!! TGATATTTATAGTAGAAAAT+CGG + chr4_1:20808291-20808310 Msa0539660:intron 15.0%
!! AAGTATAAAAGTAATTGATT+AGG + chr4_1:20808805-20808824 Msa0539660:intron 15.0%
!! TAATGTATAATAATAAGCAT+GGG + chr4_1:20808846-20808865 Msa0539660:intron 15.0%
!! GTTAATAAACAAAAGATATA+AGG - chr4_1:20809297-20809316 None:intergenic 15.0%
!!! AAATCATAACTTCATTTTTT+AGG + chr4_1:20811433-20811452 Msa0539660:intron 15.0%
!!! TTTTTTTTTCTTGCAATAAA+AGG + chr4_1:20811574-20811593 Msa0539660:intron 15.0%
!!! TTTTTTTTCTTGCAATAAAA+GGG + chr4_1:20811575-20811594 Msa0539660:intron 15.0%
!! ATGTATGAAAAAAATATCTA+TGG + chr4_1:20812934-20812953 Msa0539660:intron 15.0%
!! TAATATAATGCATTCATTTA+TGG + chr4_1:20813145-20813164 Msa0539660:intron 15.0%
!!! CAAAATAACAAAAATTTGTT+TGG + chr4_1:20813535-20813554 Msa0539660:CDS 15.0%
!! CTAAATAAAATTCAGAATTT+GGG + chr4_1:20814045-20814064 Msa0539660:three_prime_UTR 15.0%
!!! TTTCATTAAAATAAGGATTT+TGG + chr4_1:20817230-20817249 Msa0539660:three_prime_UTR 15.0%
!! TAAAAATGAAATAGAAAAGG+AGG - chr4_1:20805937-20805956 None:intergenic 20.0%
!! TGATTATGATTAATTGAGTT+TGG + chr4_1:20806097-20806116 Msa0539660:intron 20.0%
!!! TTGTGAGGTTATATAATTTT+TGG + chr4_1:20806331-20806350 Msa0539660:intron 20.0%
!!! TGTGAGGTTATATAATTTTT+GGG + chr4_1:20806332-20806351 Msa0539660:intron 20.0%
!!! ATGTTGATAAATGATAATGT+CGG + chr4_1:20806404-20806423 Msa0539660:intron 20.0%
!!! AATATCGGTTTGTTTAAATT+TGG + chr4_1:20806481-20806500 Msa0539660:intron 20.0%
!! CCTTCGAAAATAAAAAATTT+AGG - chr4_1:20806984-20807003 None:intergenic 20.0%
!!! CCTAAATTTTTTATTTTCGA+AGG + chr4_1:20806981-20807000 Msa0539660:intron 20.0%
!! TTAAACTTTAAGTGGTTAAA+GGG - chr4_1:20807220-20807239 None:intergenic 20.0%
!! TTCAAATGTTAAACTTTAAG+TGG - chr4_1:20807228-20807247 None:intergenic 20.0%
!!! TTTTATTTATACTACCACTT+TGG - chr4_1:20807708-20807727 None:intergenic 20.0%
!!! TGTTTAAAGCTTTATTTATC+AGG - chr4_1:20808254-20808273 None:intergenic 20.0%
!!! TTCTTAGATAATTTTTGCTT+TGG - chr4_1:20808326-20808345 None:intergenic 20.0%
!! ATCTATATTCTTCATAGATT+AGG + chr4_1:20808776-20808795 Msa0539660:intron 20.0%
!! CTAATGTATAATAATAAGCA+TGG + chr4_1:20808845-20808864 Msa0539660:intron 20.0%
!! AGGTATCAACAATTAATTTA+GGG - chr4_1:20808918-20808937 None:intergenic 20.0%
!! TAGGTATCAACAATTAATTT+AGG - chr4_1:20808919-20808938 None:intergenic 20.0%
!! ATTAATTGTTGATACCTAAA+TGG + chr4_1:20808921-20808940 Msa0539660:intron 20.0%
!! ATTGTTCTAATATCTTTATG+TGG + chr4_1:20809192-20809211 Msa0539660:intron 20.0%
!! TTAACATAGTTATTTGAATG+TGG - chr4_1:20809358-20809377 None:intergenic 20.0%
!!! TTTCTTTTCATACGTATATA+TGG - chr4_1:20809534-20809553 None:intergenic 20.0%
!! AAATCACATTAAGTAATTAC+TGG + chr4_1:20809552-20809571 Msa0539660:intron 20.0%
!!! TAATTCCTGTTAATTTTGTA+TGG + chr4_1:20809850-20809869 Msa0539660:intron 20.0%
!! TATTTCCATACAAAATTAAC+AGG - chr4_1:20809858-20809877 None:intergenic 20.0%
!! CATATGGTAATTTCTAATAT+TGG + chr4_1:20810363-20810382 Msa0539660:intron 20.0%
!!! GAGTTTATGTTTTATATCAA+TGG + chr4_1:20810507-20810526 Msa0539660:intron 20.0%
!! TAAAAATCCTTACAATACTA+TGG + chr4_1:20810772-20810791 Msa0539660:intron 20.0%
!!! CTTGTCATTTACTATTATTT+TGG - chr4_1:20811098-20811117 None:intergenic 20.0%
!! TGTAATTGATATAGATAATC+TGG + chr4_1:20811230-20811249 Msa0539660:intron 20.0%
!!! GATTCTTTCTTTTGTTTTTT+TGG + chr4_1:20811543-20811562 Msa0539660:intron 20.0%
!! GTTCTATCATTAACAAAAAA+AGG - chr4_1:20811910-20811929 None:intergenic 20.0%
!! ACAGAAAATATAATTTACCT+TGG - chr4_1:20811997-20812016 None:intergenic 20.0%
!! TCCATTAATATTAGGATTTA+TGG + chr4_1:20812608-20812627 Msa0539660:intron 20.0%
!!! TATTTTTTTCATACATCCAA+CGG - chr4_1:20812930-20812949 None:intergenic 20.0%
!!! TTTTTTTTTTACTCAACAAG+AGG - chr4_1:20813016-20813035 None:intergenic 20.0%
!!! TTTTTGTTATTTTGATTCTG+TGG - chr4_1:20813529-20813548 None:intergenic 20.0%
!!! ATAACAAAAATTTGTTTGGA+TGG + chr4_1:20813539-20813558 Msa0539660:CDS 20.0%
!!! TTGCTTTATTAGTTTGTTTT+AGG + chr4_1:20813710-20813729 Msa0539660:CDS 20.0%
!! GCTAAATAAAATTCAGAATT+TGG + chr4_1:20814044-20814063 Msa0539660:three_prime_UTR 20.0%
!! ATAATTGCTATAAATTGGAA+TGG + chr4_1:20814352-20814371 Msa0539660:three_prime_UTR 20.0%
!! ACAATTATAATATCCTCAAA+AGG + chr4_1:20815768-20815787 Msa0539660:three_prime_UTR 20.0%
!!! AATAGTAAGAAGAATTTTCT+TGG - chr4_1:20817124-20817143 None:intergenic 20.0%
!! AGAAAATTCTTCTTACTATT+TGG + chr4_1:20817124-20817143 Msa0539660:three_prime_UTR 20.0%
!! TCAAAGTTTATTTGAACATA+AGG + chr4_1:20817289-20817308 Msa0539660:three_prime_UTR 20.0%
!! CAAAGTTTATTTGAACATAA+GGG + chr4_1:20817290-20817309 Msa0539660:three_prime_UTR 20.0%
!!! ATAATTTGAAATAAGCCTAA+AGG + chr4_1:20817551-20817570 Msa0539660:intron 20.0%
!! AATAATAATGTTTGAGAGAA+AGG + chr4_1:20817459-20817478 Msa0539660:three_prime_UTR 20.0%
!! ACGATTTTCATAAAGACATT+TGG + chr4_1:20806006-20806025 Msa0539660:CDS 25.0%
! GCAAATTCAAAAAATTTGTG+AGG + chr4_1:20806316-20806335 Msa0539660:intron 25.0%
!!! AGGTTATATAATTTTTGGGA+TGG + chr4_1:20806336-20806355 Msa0539660:intron 25.0%
! TTGTAGATAGAATGGAATTT+AGG + chr4_1:20806362-20806381 Msa0539660:intron 25.0%
! TGTAGATAGAATGGAATTTA+GGG + chr4_1:20806363-20806382 Msa0539660:intron 25.0%
! GTTTAAATTTGGCTATTCTA+CGG + chr4_1:20806492-20806511 Msa0539660:intron 25.0%
!!! TATAAAGTGTTGTCAAATAG+TGG - chr4_1:20806537-20806556 None:intergenic 25.0%
!!! TTATACTGAATAGAGTATTG+CGG + chr4_1:20806552-20806571 Msa0539660:intron 25.0%
! TTTATTGATGGAAAACTAAG+TGG + chr4_1:20806733-20806752 Msa0539660:intron 25.0%
! GAGAAAAACATAAACTTACA+TGG + chr4_1:20807003-20807022 Msa0539660:intron 25.0%
!! TTTTCCACCAAAATGTTTTA+AGG + chr4_1:20807086-20807105 Msa0539660:intron 25.0%
!! ATTTCCTTAAAACATTTTGG+TGG - chr4_1:20807093-20807112 None:intergenic 25.0%
!! GTCATTTCCTTAAAACATTT+TGG - chr4_1:20807096-20807115 None:intergenic 25.0%
! GTTAAACTTTAAGTGGTTAA+AGG - chr4_1:20807221-20807240 None:intergenic 25.0%
! NNNGGGTTATTGAATCAAAT+TGG + chr4_1:20807359-20807378 Msa0539660:intron 25.0%
!!! ATTTGACTTGTTTTTTCTGA+CGG - chr4_1:20807644-20807663 None:intergenic 25.0%
! AATAAAACTAACACTACCAT+TGG + chr4_1:20807721-20807740 Msa0539660:intron 25.0%
!! TGAAATTAAGAGTATGTCTA+AGG - chr4_1:20807882-20807901 None:intergenic 25.0%
!!! AGATAATTTTTGCTTTGGAA+AGG - chr4_1:20808321-20808340 None:intergenic 25.0%
!!! TGATGATTTGCTTATAATGT+TGG + chr4_1:20808485-20808504 Msa0539660:intron 25.0%
! TTTCAAAATCGTCAATATTG+CGG + chr4_1:20808625-20808644 Msa0539660:intron 25.0%
! CCAAACTTATCCTTAAAAAA+TGG - chr4_1:20808721-20808740 None:intergenic 25.0%
!!! CCATTTTTTAAGGATAAGTT+TGG + chr4_1:20808718-20808737 Msa0539660:intron 25.0%
!! AAAGTAATTGATTAGGTTGT+TGG + chr4_1:20808812-20808831 Msa0539660:intron 25.0%
! TTGATTAGATTGAGGAAAAA+GGG - chr4_1:20808957-20808976 None:intergenic 25.0%
! ATTGATTAGATTGAGGAAAA+AGG - chr4_1:20808958-20808977 None:intergenic 25.0%
! ATGATAGATTGATTAGATTG+AGG - chr4_1:20808965-20808984 None:intergenic 25.0%
! TTTCAAAGGATATAGAAATC+AGG + chr4_1:20809024-20809043 Msa0539660:intron 25.0%
! AATCATAGAAAGCAATAGAA+CGG - chr4_1:20809272-20809291 None:intergenic 25.0%
!!! TTATTAACTTGCAAGTCAAA+AGG + chr4_1:20809309-20809328 Msa0539660:intron 25.0%
!!! TATGTTAAAACCCTTTGTTT+TGG + chr4_1:20809370-20809389 Msa0539660:intron 25.0%
!!! AGATTTTCCTTTTGTTATGA+TGG - chr4_1:20809621-20809640 None:intergenic 25.0%
! AAATCCACATATAATATCAG+TGG - chr4_1:20810925-20810944 None:intergenic 25.0%
! TCTTAATTCTGTGTAACAAA+TGG + chr4_1:20810983-20811002 Msa0539660:intron 25.0%
! ACTGATGACATCTAATAATT+GGG + chr4_1:20811121-20811140 Msa0539660:intron 25.0%
! ATTGATATAGATAATCTGGA+TGG + chr4_1:20811234-20811253 Msa0539660:intron 25.0%
!! TCATACTAACACTTATTTCT+TGG + chr4_1:20811278-20811297 Msa0539660:intron 25.0%
!! AGAACTTGTATTCTTTTATG+AGG - chr4_1:20811348-20811367 None:intergenic 25.0%
!!! TCTTTCTTTTGTTTTTTTGG+AGG + chr4_1:20811546-20811565 Msa0539660:intron 25.0%
!!! CTTTCTTTTGTTTTTTTGGA+GGG + chr4_1:20811547-20811566 Msa0539660:intron 25.0%
!!! TTTCTTTTGTTTTTTTGGAG+GGG + chr4_1:20811548-20811567 Msa0539660:intron 25.0%
!! TTGATGGCCTTAAATTTATT+TGG - chr4_1:20811605-20811624 None:intergenic 25.0%
! TATGATAGTATTTCTTAGTC+AGG - chr4_1:20811804-20811823 None:intergenic 25.0%
! GCAACGAAAAAAATATAATG+CGG + chr4_1:20811880-20811899 Msa0539660:intron 25.0%
! TTAAATTCAGATGATTACCT+TGG - chr4_1:20811959-20811978 None:intergenic 25.0%
!!! TTCTAAAATAGCTTATGGAT+AGG - chr4_1:20812133-20812152 None:intergenic 25.0%
!!! AAGCTTTCTAAAATAGCTTA+TGG - chr4_1:20812138-20812157 None:intergenic 25.0%
! ATATTGTCAGTTTGAAGATA+AGG - chr4_1:20812351-20812370 None:intergenic 25.0%
! GTAGATATTGAATCATGATT+TGG + chr4_1:20812563-20812582 Msa0539660:intron 25.0%
! GCCATAAATCCTAATATTAA+TGG - chr4_1:20812612-20812631 None:intergenic 25.0%
! GTTGAGTAAAAAAAAAAGAG+AGG + chr4_1:20813019-20813038 Msa0539660:intron 25.0%
!!! AATTTTTTCTTCAATGCTGA+AGG + chr4_1:20813183-20813202 Msa0539660:intron 25.0%
!!! TTTGTTGATAAAGCTCTTTT+GGG + chr4_1:20813658-20813677 Msa0539660:CDS 25.0%
!! AATAATAACAGCCTTTTACT+GGG - chr4_1:20813752-20813771 None:intergenic 25.0%
!! AAATAATAACAGCCTTTTAC+TGG - chr4_1:20813753-20813772 None:intergenic 25.0%
! AAAAGCAATTACAAGCATAA+AGG + chr4_1:20814005-20814024 Msa0539660:three_prime_UTR 25.0%
! AACAATAATAATTCCACAAC+AGG + chr4_1:20814195-20814214 Msa0539660:three_prime_UTR 25.0%
! TCAAATCATTGTATCTGATT+TGG + chr4_1:20814246-20814265 Msa0539660:three_prime_UTR 25.0%
! CAATTTATAGCAATTATCGT+TGG - chr4_1:20814349-20814368 None:intergenic 25.0%
! CAACGATAATTGCTATAAAT+TGG + chr4_1:20814347-20814366 Msa0539660:three_prime_UTR 25.0%
! TTCTTTACTTGTTTGTGATT+GGG - chr4_1:20814684-20814703 None:intergenic 25.0%
! TTTCTTTACTTGTTTGTGAT+TGG - chr4_1:20814685-20814704 None:intergenic 25.0%
! CACAAACAAGTAAAGAAAAA+TGG + chr4_1:20814687-20814706 Msa0539660:three_prime_UTR 25.0%
! AACAAGTAAAGAAAAATGGT+TGG + chr4_1:20814691-20814710 Msa0539660:three_prime_UTR 25.0%
!! TACTCATTATTATCCTCTTT+TGG - chr4_1:20815148-20815167 None:intergenic 25.0%
! TATTATAATTGTGACAGTTG+AGG - chr4_1:20815760-20815779 None:intergenic 25.0%
!!! ACTCTAAGATAATAAAGCTT+AGG + chr4_1:20815954-20815973 Msa0539660:three_prime_UTR 25.0%
! ATAGATTGGAGGATAAAAAA+GGG - chr4_1:20816124-20816143 None:intergenic 25.0%
! TATAGATTGGAGGATAAAAA+AGG - chr4_1:20816125-20816144 None:intergenic 25.0%
!! ATCAGTAAAGATGATTTTGT+TGG - chr4_1:20816218-20816237 None:intergenic 25.0%
! TTCACATACAAAAAATGCAT+TGG + chr4_1:20816440-20816459 Msa0539660:three_prime_UTR 25.0%
! ATCTGCATTAACATAACATT+TGG + chr4_1:20816572-20816591 Msa0539660:three_prime_UTR 25.0%
!!! TTTTTCTTTTTCAGTTCCAA+TGG + chr4_1:20816754-20816773 Msa0539660:three_prime_UTR 25.0%
!!! TTAGTGTTGATTTCTTGTAA+AGG + chr4_1:20816872-20816891 Msa0539660:three_prime_UTR 25.0%
!! TAAGAAGAATTTTCTTGGAA+AGG - chr4_1:20817119-20817138 None:intergenic 25.0%
!!! TAAAATAAGGATTTTGGTCT+TGG + chr4_1:20817236-20817255 Msa0539660:three_prime_UTR 25.0%
!!! GTTTTGATATTTGAATGAGA+AGG + chr4_1:20817407-20817426 Msa0539660:three_prime_UTR 25.0%
! TAATGTTTGAGAGAAAGAAA+AGG + chr4_1:20817464-20817483 Msa0539660:three_prime_UTR 25.0%
!!! GGAGAATTTTCTTTTAAAAG+TGG + chr4_1:20817485-20817504 Msa0539660:three_prime_UTR 25.0%
!!! TTTTAAAAGTGGTTAGTGAA+GGG + chr4_1:20817496-20817515 Msa0539660:three_prime_UTR 25.0%
CACAGAAAAAGAAGAAGAAA+TGG + chr4_1:20805744-20805763 Msa0539660:exon 30.0%
! ACAGAGTGATAGTGAATATA+TGG + chr4_1:20806157-20806176 Msa0539660:intron 30.0%
GATGGAATTTGTAGATAGAA+TGG + chr4_1:20806354-20806373 Msa0539660:intron 30.0%
GTAGATAGAATGGAATTTAG+GGG + chr4_1:20806364-20806383 Msa0539660:intron 30.0%
TTCTCAATTGACAACAATGT+CGG - chr4_1:20806453-20806472 None:intergenic 30.0%
! GTATTGTGTAAGTTTCCTTT+TGG - chr4_1:20806795-20806814 None:intergenic 30.0%
TAAACGTTGTTTGAATCTTG+AGG + chr4_1:20806920-20806939 Msa0539660:intron 30.0%
AACTTCTGCTGTTATGTAAA+AGG - chr4_1:20807425-20807444 None:intergenic 30.0%
AAGTTGCATGTTCATTTACA+TGG + chr4_1:20807440-20807459 Msa0539660:intron 30.0%
CGATAGAGAGATAATTAAGT+TGG + chr4_1:20807474-20807493 Msa0539660:intron 30.0%
AGTTGGAAATTCAAATGCTA+AGG + chr4_1:20807491-20807510 Msa0539660:intron 30.0%
!!! TTTGACTTGTTTTTTCTGAC+GGG - chr4_1:20807643-20807662 None:intergenic 30.0%
!!! TTTTGAAGAAGCATTGGTAA+AGG - chr4_1:20807825-20807844 None:intergenic 30.0%
AGTCACTAAACTTACCATAA+GGG - chr4_1:20808126-20808145 None:intergenic 30.0%
TAGTCACTAAACTTACCATA+AGG - chr4_1:20808127-20808146 None:intergenic 30.0%
TTGCCAACAAAACAAAAAGT+TGG - chr4_1:20808216-20808235 None:intergenic 30.0%
!! GCTTTATTTATCAGGATTTG+AGG - chr4_1:20808246-20808265 None:intergenic 30.0%
! TGCATTTTACCACAATGTAA+TGG - chr4_1:20808563-20808582 None:intergenic 30.0%
TTGGTCATTGTTTCAAATTG+CGG - chr4_1:20808670-20808689 None:intergenic 30.0%
CAGAAATTTAAGTGCAGTAT+TGG - chr4_1:20808689-20808708 None:intergenic 30.0%
TGCACTTAAATTTCTGTTAC+CGG + chr4_1:20808693-20808712 Msa0539660:intron 30.0%
TTATCCTTAAAAAATGGAGC+CGG - chr4_1:20808715-20808734 None:intergenic 30.0%
! GAAATAGAACTGATTCTGAT+AGG - chr4_1:20809008-20809027 None:intergenic 30.0%
CAGAATCAGTTCTATTTCAA+AGG + chr4_1:20809010-20809029 Msa0539660:intron 30.0%
! GATTTTCATCAACAAACTGA+TGG - chr4_1:20809091-20809110 None:intergenic 30.0%
!! ATGAAAATCAGTTTTGACAG+TGG + chr4_1:20809102-20809121 Msa0539660:intron 30.0%
TGTTATGTCATTCTTGTGTA+TGG + chr4_1:20809409-20809428 Msa0539660:intron 30.0%
!! TTTTGTTATGATGGTATCCA+TGG - chr4_1:20809612-20809631 None:intergenic 30.0%
ATGGATACCATCATAACAAA+AGG + chr4_1:20809611-20809630 Msa0539660:CDS 30.0%
CAAATTTGAATTCACACCTT+TGG - chr4_1:20809827-20809846 None:intergenic 30.0%
GAGATTCTTCCAATTAATGT+TGG + chr4_1:20809973-20809992 Msa0539660:CDS 30.0%
CCTAAACAACCAACATTAAT+TGG - chr4_1:20809985-20810004 None:intergenic 30.0%
! CCAATTAATGTTGGTTGTTT+AGG + chr4_1:20809982-20810001 Msa0539660:CDS 30.0%
! TCACTACTAAAGTACTTACA+AGG - chr4_1:20810071-20810090 None:intergenic 30.0%
GTGATGAATTAATAGATGTG+AGG - chr4_1:20810265-20810284 None:intergenic 30.0%
TATTAATTCATCACCAACGT+AGG + chr4_1:20810271-20810290 Msa0539660:intron 30.0%
CTGATGGAGTTAAAGAAATA+TGG + chr4_1:20810318-20810337 Msa0539660:CDS 30.0%
TTAGAAATTACCATATGCTC+CGG - chr4_1:20810360-20810379 None:intergenic 30.0%
! TTTTGCATAACCTAATTGCT+TGG - chr4_1:20810475-20810494 None:intergenic 30.0%
! ACTAAGGCATTCAATAAAGT+TGG - chr4_1:20810581-20810600 None:intergenic 30.0%
AATCCTTACAATACTATGGA+TGG + chr4_1:20810776-20810795 Msa0539660:intron 30.0%
AATGAATCGAGAATATACTG+TGG + chr4_1:20810842-20810861 Msa0539660:CDS 30.0%
ATGAATCGAGAATATACTGT+GGG + chr4_1:20810843-20810862 Msa0539660:CDS 30.0%
ATTGCCACTGATATTATATG+TGG + chr4_1:20810918-20810937 Msa0539660:CDS 30.0%
GATATTATATGTGGATTTCC+AGG + chr4_1:20810927-20810946 Msa0539660:CDS 30.0%
GACTGATGACATCTAATAAT+TGG + chr4_1:20811120-20811139 Msa0539660:intron 30.0%
CTGATGACATCTAATAATTG+GGG + chr4_1:20811122-20811141 Msa0539660:intron 30.0%
TGGTATAAAATACTAGTGCA+TGG + chr4_1:20811254-20811273 Msa0539660:intron 30.0%
!!! TTTTAGGATGAAACTGATGT+AGG + chr4_1:20811449-20811468 Msa0539660:intron 30.0%
!!! TTCTTTTGTTTTTTTGGAGG+GGG + chr4_1:20811549-20811568 Msa0539660:intron 30.0%
! ATAAATTTAAGGCCATCAAC+AGG + chr4_1:20811606-20811625 Msa0539660:intron 30.0%
CTAATATTAAGTCCTGTTGA+TGG - chr4_1:20811621-20811640 None:intergenic 30.0%
CATCAACAGGACTTAATATT+AGG + chr4_1:20811619-20811638 Msa0539660:intron 30.0%
!!! TTTTCAGTTCCACTTTTTCT+AGG + chr4_1:20811668-20811687 Msa0539660:intron 30.0%
TTAGCAACTATTCAAAAGGA+AGG - chr4_1:20811745-20811764 None:intergenic 30.0%
TTTGTTTAAATAGTTGCCAC+CGG + chr4_1:20812016-20812035 Msa0539660:intron 30.0%
TCATGAGATAAGTTCAAACA+AGG + chr4_1:20812244-20812263 Msa0539660:intron 30.0%
AAGGAAAAGTGGAAAGAATT+TGG + chr4_1:20812494-20812513 Msa0539660:CDS 30.0%
ATTACTGATATTGCATCTGA+TGG + chr4_1:20812517-20812536 Msa0539660:CDS 30.0%
GGGTTTCAACAAAATAATCA+CGG - chr4_1:20812637-20812656 None:intergenic 30.0%
!! AAAACTTTTTCCTGGTACTT+TGG - chr4_1:20812679-20812698 None:intergenic 30.0%
!! GCTTACAAAAAACTTTTTCC+TGG - chr4_1:20812687-20812706 None:intergenic 30.0%
! ACAGTATTTGAGACTTTAGT+TGG + chr4_1:20812810-20812829 Msa0539660:intron 30.0%
! TATTTGAGACTTTAGTTGGT+TGG + chr4_1:20812814-20812833 Msa0539660:intron 30.0%
AATCTCTCACAAGATTATCA+TGG + chr4_1:20812897-20812916 Msa0539660:intron 30.0%
AAAAAAAAGAGAGGTTGTGA+TGG + chr4_1:20813028-20813047 Msa0539660:intron 30.0%
AAAAAAAGAGAGGTTGTGAT+GGG + chr4_1:20813029-20813048 Msa0539660:intron 30.0%
!! CTTTGTTGATAAAGCTCTTT+TGG + chr4_1:20813657-20813676 Msa0539660:CDS 30.0%
!!! GTTTTAGGTTTAGTGTTCTT+TGG + chr4_1:20813725-20813744 Msa0539660:CDS 30.0%
CACTTTGTATGTCAAAACTT+TGG - chr4_1:20813811-20813830 None:intergenic 30.0%
!! CAAAGTTTTGACATACAAAG+TGG + chr4_1:20813809-20813828 Msa0539660:three_prime_UTR 30.0%
! GAATCCTTTTACAACAATAC+TGG + chr4_1:20813938-20813957 Msa0539660:three_prime_UTR 30.0%
ATTACACCCAAATGAAAAGA+GGG - chr4_1:20814139-20814158 None:intergenic 30.0%
!! ATCATTGTATCTGATTTGGA+AGG + chr4_1:20814250-20814269 Msa0539660:three_prime_UTR 30.0%
AACCTCTTGAAGAAATTAAC+TGG + chr4_1:20814274-20814293 Msa0539660:three_prime_UTR 30.0%
TACCAGTTAATTTCTTCAAG+AGG - chr4_1:20814279-20814298 None:intergenic 30.0%
! AAGAAATTAACTGGTACTGA+TGG + chr4_1:20814283-20814302 Msa0539660:three_prime_UTR 30.0%
TGACATTATGCGATGAAAAT+TGG + chr4_1:20814840-20814859 Msa0539660:three_prime_UTR 30.0%
! GGTTGAACATAATGCATTTT+GGG + chr4_1:20815015-20815034 Msa0539660:three_prime_UTR 30.0%
!! CCTAATGGGTTAAAAAAGAA+TGG - chr4_1:20815117-20815136 None:intergenic 30.0%
!!! CCATTCTTTTTTAACCCATT+AGG + chr4_1:20815114-20815133 Msa0539660:three_prime_UTR 30.0%
!!! TTTTGGTTCTTCAACCTAAT+GGG - chr4_1:20815131-20815150 None:intergenic 30.0%
CCTAACAATGTTGAAATCTT+GGG - chr4_1:20815726-20815745 None:intergenic 30.0%
TCCTAACAATGTTGAAATCT+TGG - chr4_1:20815727-20815746 None:intergenic 30.0%
AAAGGGATGAAGATAAATCA+TGG - chr4_1:20816107-20816126 None:intergenic 30.0%
! GTAAAGATGATTTTGTTGGT+AGG - chr4_1:20816214-20816233 None:intergenic 30.0%
TTTACTTGAAGTTACTGTGA+AGG - chr4_1:20816252-20816271 None:intergenic 30.0%
TGCATTAACATAACATTTGG+AGG + chr4_1:20816575-20816594 Msa0539660:three_prime_UTR 30.0%
AAGAGTTGAAACTCAAACAA+GGG - chr4_1:20816621-20816640 None:intergenic 30.0%
AAATTTGCACCATGATTAAC+AGG + chr4_1:20816659-20816678 Msa0539660:three_prime_UTR 30.0%
! GTTAGAACTTTTCATTCCAT+TGG - chr4_1:20816773-20816792 None:intergenic 30.0%
AATCAACACTAACATAAACG+TGG - chr4_1:20816864-20816883 None:intergenic 30.0%
GTAGATTCAGATTCAGATAT+AGG + chr4_1:20817070-20817089 Msa0539660:three_prime_UTR 30.0%
GTTTATTTGAACATAAGGGT+TGG + chr4_1:20817294-20817313 Msa0539660:three_prime_UTR 30.0%
CTTATTCCAAAAGATGGAAA+AGG - chr4_1:20817325-20817344 None:intergenic 30.0%
!!! CTTTTCCATCTTTTGGAATA+AGG + chr4_1:20817323-20817342 Msa0539660:three_prime_UTR 30.0%
AGTAACCTTATTCCAAAAGA+TGG - chr4_1:20817331-20817350 None:intergenic 30.0%
TACAATCAAGATGAACAGAT+TGG - chr4_1:20817374-20817393 None:intergenic 30.0%
!! CTTTTAAAAGTGGTTAGTGA+AGG + chr4_1:20817495-20817514 Msa0539660:three_prime_UTR 30.0%
TAATGTTTGAGAGAAAGGAA+TGG + chr4_1:20817601-20817620 Msa0539660:three_prime_UTR 30.0%
! GACATTGAAGATTTGCTCAT+CGG + chr4_1:20805769-20805788 Msa0539660:CDS 35.0%
ATTTGGATGTTCTCATAACC+AGG + chr4_1:20806023-20806042 Msa0539660:CDS 35.0%
TTGATCAAATTCAGCTTACC+TGG - chr4_1:20806044-20806063 None:intergenic 35.0%
! AGTGATAGTGAATATATGGC+TGG + chr4_1:20806161-20806180 Msa0539660:CDS 35.0%
AGAATGGAATTTAGGGGATA+TGG + chr4_1:20806370-20806389 Msa0539660:intron 35.0%
ATTTAGGGGATATGGAAACT+TGG + chr4_1:20806378-20806397 Msa0539660:intron 35.0%
TTTAGGGGATATGGAAACTT+GGG + chr4_1:20806379-20806398 Msa0539660:intron 35.0%
TTGTTGTCAATTGAGAATCG+CGG + chr4_1:20806456-20806475 Msa0539660:intron 35.0%
TTGAGAATCGCGGAAAATAT+CGG + chr4_1:20806466-20806485 Msa0539660:intron 35.0%
TGTTGTCAAATAGTGGCTAT+AGG - chr4_1:20806530-20806549 None:intergenic 35.0%
TATTATTCCGCAAAGCATAG+CGG - chr4_1:20806601-20806620 None:intergenic 35.0%
! ACAATAGCTCTATAGCATAG+CGG - chr4_1:20806640-20806659 None:intergenic 35.0%
ACAGACAATGTTGTCAATAG+AGG - chr4_1:20806665-20806684 None:intergenic 35.0%
TAGGTAAACGATGCATACTA+TGG - chr4_1:20806704-20806723 None:intergenic 35.0%
AGTCATTTCTCTTGTCCAAA+AGG + chr4_1:20806777-20806796 Msa0539660:intron 35.0%
AACTTACACAATACCTACAG+AGG + chr4_1:20806801-20806820 Msa0539660:intron 35.0%
GATGTGACTCATATCTCAAA+AGG + chr4_1:20806841-20806860 Msa0539660:intron 35.0%
TGAAGATATGAAGACCTTGT+TGG + chr4_1:20806883-20806902 Msa0539660:intron 35.0%
TTACAAATTACCCACCAACA+AGG - chr4_1:20806900-20806919 None:intergenic 35.0%
TTTAGGTAAGTTAAGTCGCA+GGG - chr4_1:20806967-20806986 None:intergenic 35.0%
ATTTAGGTAAGTTAAGTCGC+AGG - chr4_1:20806968-20806987 None:intergenic 35.0%
AAGCAAATTGGATGTGTCAT+GGG - chr4_1:20807155-20807174 None:intergenic 35.0%
TAAGCAAATTGGATGTGTCA+TGG - chr4_1:20807156-20807175 None:intergenic 35.0%
CTGGCTATCATTAAGCAAAT+TGG - chr4_1:20807167-20807186 None:intergenic 35.0%
GTTAAAGGGTTAATGCCTAA+AGG - chr4_1:20807206-20807225 None:intergenic 35.0%
AAAAGCAGTCTTTCTGATGT+TGG - chr4_1:20807401-20807420 None:intergenic 35.0%
!!! TTGTTGTTTTATGGTGTTGG+AGG - chr4_1:20807615-20807634 None:intergenic 35.0%
TCCAACACCATAAAACAACA+AGG + chr4_1:20807614-20807633 Msa0539660:intron 35.0%
!!! TCCTTGTTGTTTTATGGTGT+TGG - chr4_1:20807618-20807637 None:intergenic 35.0%
GAGAAGTGGTTTCATGAATT+TGG - chr4_1:20807764-20807783 None:intergenic 35.0%
ATTCATGAAACCACTTCTCA+TGG + chr4_1:20807765-20807784 Msa0539660:intron 35.0%
!! GTGTGATTTTGAAGAAGCAT+TGG - chr4_1:20807831-20807850 None:intergenic 35.0%
TGCTTCTTCAAAATCACACA+TGG + chr4_1:20807832-20807851 Msa0539660:intron 35.0%
GTCTAAGGATGAGATTTCAA+AGG - chr4_1:20807867-20807886 None:intergenic 35.0%
ATGCTTCCTTAAATGGAATG+AGG - chr4_1:20807931-20807950 None:intergenic 35.0%
TGATGTCAACATAGATGAAG+TGG - chr4_1:20808005-20808024 None:intergenic 35.0%
TTCATCTATGTTGACATCAG+CGG + chr4_1:20808006-20808025 Msa0539660:intron 35.0%
ATAAGGGCAGTTTATTGGAA+GGG - chr4_1:20808110-20808129 None:intergenic 35.0%
TTACCATAAGGGCAGTTTAT+TGG - chr4_1:20808115-20808134 None:intergenic 35.0%
!!! ACGCCAACTTTTTGTTTTGT+TGG + chr4_1:20808210-20808229 Msa0539660:intron 35.0%
! ACAGTTTAAAACCATGCTAC+AGG - chr4_1:20808514-20808533 None:intergenic 35.0%
!!! TGTAGCATGGTTTTAAACTG+TGG + chr4_1:20808513-20808532 Msa0539660:intron 35.0%
!!! ATGGTTTTAAACTGTGGTTG+TGG + chr4_1:20808519-20808538 Msa0539660:intron 35.0%
ATCTGCAATTTCAACCTCAT+CGG - chr4_1:20808587-20808606 None:intergenic 35.0%
TGATACCTAAATGGTTCTCA+AGG + chr4_1:20808930-20808949 Msa0539660:intron 35.0%
GATACCTAAATGGTTCTCAA+GGG + chr4_1:20808931-20808950 Msa0539660:intron 35.0%
CGATGTCTGCTTCAATAAAA+TGG - chr4_1:20809062-20809081 None:intergenic 35.0%
GACATTGAGACCAAAACAAA+GGG - chr4_1:20809383-20809402 None:intergenic 35.0%
AGACATTGAGACCAAAACAA+AGG - chr4_1:20809384-20809403 None:intergenic 35.0%
TATGTCATTCTTGTGTATGG+AGG + chr4_1:20809412-20809431 Msa0539660:intron 35.0%
AATAAACCACTAGTTGTTGC+TGG + chr4_1:20809644-20809663 Msa0539660:CDS 35.0%
GTTGTAGAGGAGACTTTAAA+AGG + chr4_1:20809752-20809771 Msa0539660:CDS 35.0%
TTTGAATTCACACCTTTGGA+AGG - chr4_1:20809823-20809842 None:intergenic 35.0%
! TGCTTTTCAACCTTTGTAAC+AGG + chr4_1:20809930-20809949 Msa0539660:intron 35.0%
TTCTTTCTCACCTGTTACAA+AGG - chr4_1:20809943-20809962 None:intergenic 35.0%
ATTGCAAGACAAAACATGCT+CGG + chr4_1:20810016-20810035 Msa0539660:CDS 35.0%
GATATAGAGAGAGAAATGTG+AGG - chr4_1:20810159-20810178 None:intergenic 35.0%
GAGGAAAATAAAATAGTGCC+CGG - chr4_1:20810208-20810227 None:intergenic 35.0%
GTAAAATCTGTGGTATCTGA+TGG + chr4_1:20810302-20810321 Msa0539660:CDS 35.0%
GCATATACATCCAAGCAATT+AGG + chr4_1:20810462-20810481 Msa0539660:intron 35.0%
CTTAGATCATGATGTCTTAC+AGG + chr4_1:20810533-20810552 Msa0539660:intron 35.0%
TTCAAGTGCTCAAGGATAAA+AGG - chr4_1:20810659-20810678 None:intergenic 35.0%
! AAGAGATAGCAGAGGTTTTA+CGG + chr4_1:20810678-20810697 Msa0539660:CDS 35.0%
TCACCATCCATAGTATTGTA+AGG - chr4_1:20810782-20810801 None:intergenic 35.0%
ATATTCTCGATTCATTGCCT+GGG - chr4_1:20810838-20810857 None:intergenic 35.0%
TATATTCTCGATTCATTGCC+TGG - chr4_1:20810839-20810858 None:intergenic 35.0%
ATTAAGACTATCCACTAACC+TGG - chr4_1:20810948-20810967 None:intergenic 35.0%
TCATCAGTTTCACCTGAAAA+GGG - chr4_1:20811304-20811323 None:intergenic 35.0%
TTCATCAGTTTCACCTGAAA+AGG - chr4_1:20811305-20811324 None:intergenic 35.0%
GGGTGCTCCAAATAAATTTA+AGG + chr4_1:20811595-20811614 Msa0539660:intron 35.0%
CAACTATTCAAAAGGAAGGA+CGG - chr4_1:20811741-20811760 None:intergenic 35.0%
CCTCTTAGCAACTATTCAAA+AGG - chr4_1:20811749-20811768 None:intergenic 35.0%
! CCTTTTGAATAGTTGCTAAG+AGG + chr4_1:20811746-20811765 Msa0539660:intron 35.0%
TTACCTTGGAGAGGAAAAAA+AGG - chr4_1:20811945-20811964 None:intergenic 35.0%
TTGTTTAAATAGTTGCCACC+GGG + chr4_1:20812017-20812036 Msa0539660:intron 35.0%
CAGACCATCCAAATTCTATT+GGG - chr4_1:20812050-20812069 None:intergenic 35.0%
TTGTAAGTGTACTCAAACAC+TGG + chr4_1:20812203-20812222 Msa0539660:intron 35.0%
ATAAGCATCTTACACAAAGG+GGG - chr4_1:20812292-20812311 None:intergenic 35.0%
CATAAGCATCTTACACAAAG+GGG - chr4_1:20812293-20812312 None:intergenic 35.0%
GCATAAGCATCTTACACAAA+GGG - chr4_1:20812294-20812313 None:intergenic 35.0%
GAAAAAGGTTCCAAGTAATG+TGG + chr4_1:20812408-20812427 Msa0539660:CDS 35.0%
CAAAGACAGTTGTCAATTCA+CGG - chr4_1:20812447-20812466 None:intergenic 35.0%
GCAGGTTCATGACAATAAAA+GGG - chr4_1:20812657-20812676 None:intergenic 35.0%
AAAAACATTGTGCGACTATC+GGG - chr4_1:20812784-20812803 None:intergenic 35.0%
GAAAAACATTGTGCGACTAT+CGG - chr4_1:20812785-20812804 None:intergenic 35.0%
! TTATCATGGCTTTTTACCGT+TGG + chr4_1:20812911-20812930 Msa0539660:intron 35.0%
! TTTTCTTCAATGCTGAAGGT+TGG + chr4_1:20813187-20813206 Msa0539660:intron 35.0%
!! CAATAAAGCTTTGAACAAGC+AGG + chr4_1:20813348-20813367 Msa0539660:CDS 35.0%
AGATTTCACAAGTCTTGGTT+TGG - chr4_1:20813408-20813427 None:intergenic 35.0%
!! TTCTGAGATTTCACAAGTCT+TGG - chr4_1:20813413-20813432 None:intergenic 35.0%
AAAGGAAGAATCTGCACAAA+AGG + chr4_1:20813572-20813591 Msa0539660:CDS 35.0%
AAGGAAGAATCTGCACAAAA+GGG + chr4_1:20813573-20813592 Msa0539660:CDS 35.0%
! GATCTGATCTAAAGCAAGAA+AGG + chr4_1:20813617-20813636 Msa0539660:CDS 35.0%
AAAACATGAAGCAAGATGTG+TGG - chr4_1:20813882-20813901 None:intergenic 35.0%
! ACATCTTGCTTCATGTTTTG+TGG + chr4_1:20813883-20813902 Msa0539660:three_prime_UTR 35.0%
CACACCAGTATTGTTGTAAA+AGG - chr4_1:20813945-20813964 None:intergenic 35.0%
! CTTTTACAACAATACTGGTG+TGG + chr4_1:20813943-20813962 Msa0539660:three_prime_UTR 35.0%
! ACCTATACCCTCTTTTCATT+TGG + chr4_1:20814129-20814148 Msa0539660:three_prime_UTR 35.0%
! CCTATACCCTCTTTTCATTT+GGG + chr4_1:20814130-20814149 Msa0539660:three_prime_UTR 35.0%
CATTACACCCAAATGAAAAG+AGG - chr4_1:20814140-20814159 None:intergenic 35.0%
AATTCCTCATCCAATTCATC+TGG + chr4_1:20814583-20814602 Msa0539660:three_prime_UTR 35.0%
AGTTTGTCATCCAGATGAAT+TGG - chr4_1:20814596-20814615 None:intergenic 35.0%
! TGATTGGGATTTGGAATTAC+CGG - chr4_1:20814669-20814688 None:intergenic 35.0%
ACTTGTTTGTGATTGGGATT+TGG - chr4_1:20814678-20814697 None:intergenic 35.0%
TCAAGAACAAGACATGAACA+AGG + chr4_1:20814743-20814762 Msa0539660:three_prime_UTR 35.0%
TGAACAAGGCAAGTTGTAAT+TGG + chr4_1:20814757-20814776 Msa0539660:three_prime_UTR 35.0%
GAACAAGGCAAGTTGTAATT+GGG + chr4_1:20814758-20814777 Msa0539660:three_prime_UTR 35.0%
! GTTTTACTGCTGTGTGTAAA+TGG - chr4_1:20814810-20814829 None:intergenic 35.0%
ATTACCATATGTGGAGTCTA+AGG - chr4_1:20814876-20814895 None:intergenic 35.0%
! TTGATGTGGATTACCATATG+TGG - chr4_1:20814885-20814904 None:intergenic 35.0%
AGTTGAGTATATGCTTGATG+TGG - chr4_1:20814899-20814918 None:intergenic 35.0%
TACCTGTTAGACACATTGAT+TGG - chr4_1:20814993-20815012 None:intergenic 35.0%
TCAATGTGTCTAACAGGTAT+CGG + chr4_1:20814994-20815013 Msa0539660:three_prime_UTR 35.0%
! CGGTTGAACATAATGCATTT+TGG + chr4_1:20815014-20815033 Msa0539660:three_prime_UTR 35.0%
!! TAATGCATTTTGGGAAGCAA+AGG + chr4_1:20815024-20815043 Msa0539660:three_prime_UTR 35.0%
!!! CTTTTGGTTCTTCAACCTAA+TGG - chr4_1:20815132-20815151 None:intergenic 35.0%
!! TTAGGTTGAAGAACCAAAAG+AGG + chr4_1:20815132-20815151 Msa0539660:three_prime_UTR 35.0%
GAATTGGAAAGGTGAGAATA+AGG - chr4_1:20815200-20815219 None:intergenic 35.0%
CAAAGATCAGAGAATTGGAA+AGG - chr4_1:20815211-20815230 None:intergenic 35.0%
TTCCAATTCTCTGATCTTTG+TGG + chr4_1:20815211-20815230 Msa0539660:three_prime_UTR 35.0%
ATGGAATGAGCAGTATACAT+GGG - chr4_1:20815307-20815326 None:intergenic 35.0%
TATACTGCTCATTCCATCTA+GGG + chr4_1:20815310-20815329 Msa0539660:three_prime_UTR 35.0%
AACCCATTTGTTTCCATACT+TGG + chr4_1:20815362-20815381 Msa0539660:three_prime_UTR 35.0%
TGCCAAGTATGGAAACAAAT+GGG - chr4_1:20815367-20815386 None:intergenic 35.0%
TTGCCAAGTATGGAAACAAA+TGG - chr4_1:20815368-20815387 None:intergenic 35.0%
AACATTGGATATCTCGAACT+CGG - chr4_1:20815459-20815478 None:intergenic 35.0%
CAATGTTGAAATCTTGGGAA+GGG - chr4_1:20815721-20815740 None:intergenic 35.0%
ACAATGTTGAAATCTTGGGA+AGG - chr4_1:20815722-20815741 None:intergenic 35.0%
CCCAAGATTTCAACATTGTT+AGG + chr4_1:20815723-20815742 Msa0539660:three_prime_UTR 35.0%
AAGTCAGATGAGATTCACAA+GGG - chr4_1:20815856-20815875 None:intergenic 35.0%
! GATTTGGTTCCTCATGATAA+AGG - chr4_1:20815915-20815934 None:intergenic 35.0%
AGTGATTGAAGCTCAAGATT+TGG - chr4_1:20815931-20815950 None:intergenic 35.0%
!! ATTATGCTTGCTGTTTGGAT+GGG - chr4_1:20816080-20816099 None:intergenic 35.0%
!! AATTATGCTTGCTGTTTGGA+TGG - chr4_1:20816081-20816100 None:intergenic 35.0%
!! GTGAAATTATGCTTGCTGTT+TGG - chr4_1:20816085-20816104 None:intergenic 35.0%
GTTTGATCTTAATGAAGTGC+CGG - chr4_1:20816186-20816205 None:intergenic 35.0%
ATAAGAATCAGCATCCTGTT+TGG - chr4_1:20816316-20816335 None:intergenic 35.0%
! GTGAAACTTGGTAACTACAA+AGG - chr4_1:20816356-20816375 None:intergenic 35.0%
CAAGTTTCACTTCCACATAA+GGG + chr4_1:20816366-20816385 Msa0539660:three_prime_UTR 35.0%
CATATTCTGGATTCTGCTTT+GGG + chr4_1:20816549-20816568 Msa0539660:three_prime_UTR 35.0%
! AGGGTTGATTATGCAAAATC+AGG - chr4_1:20816602-20816621 None:intergenic 35.0%
CAAGAGTTGAAACTCAAACA+AGG - chr4_1:20816622-20816641 None:intergenic 35.0%
! CTTGTTTGAGTTTCAACTCT+TGG + chr4_1:20816620-20816639 Msa0539660:three_prime_UTR 35.0%
GAAAAACCTTCTCATTCTCA+TGG - chr4_1:20816740-20816759 None:intergenic 35.0%
TGTAAAGGAATTTCCTCATC+AGG + chr4_1:20816887-20816906 Msa0539660:three_prime_UTR 35.0%
GTAAAGGAATTTCCTCATCA+GGG + chr4_1:20816888-20816907 Msa0539660:three_prime_UTR 35.0%
! GTTTTTGCTTGTGAATGTTG+TGG + chr4_1:20816938-20816957 Msa0539660:three_prime_UTR 35.0%
! TCACCTTTTGAATGTTCAAG+AGG + chr4_1:20817034-20817053 Msa0539660:three_prime_UTR 35.0%
! CACCTTTTGAATGTTCAAGA+GGG + chr4_1:20817035-20817054 Msa0539660:three_prime_UTR 35.0%
TACCCTCTTGAACATTCAAA+AGG - chr4_1:20817040-20817059 None:intergenic 35.0%
AATCAAGATGAACAGATTGG+TGG - chr4_1:20817371-20817390 None:intergenic 35.0%
TTTGAATGAGAAGGCTAAGT+TGG + chr4_1:20817416-20817435 Msa0539660:three_prime_UTR 35.0%
AAATAAGCCTAAAGGAGAGT+TGG + chr4_1:20817559-20817578 Msa0539660:intron 35.0%
AGAGAAAGGAATGGTAACTT+TGG + chr4_1:20817610-20817629 Msa0539660:three_prime_UTR 35.0%
ATCCTGATGAAGCAGATCTA+TGG + chr4_1:20806219-20806238 Msa0539660:CDS 40.0%
TTAGGGGATATGGAAACTTG+GGG + chr4_1:20806380-20806399 Msa0539660:intron 40.0%
TCAATTGACAACAATGTCGG+CGG - chr4_1:20806450-20806469 None:intergenic 40.0%
TCAAATTCCGCTATGCTTTG+CGG + chr4_1:20806591-20806610 Msa0539660:intron 40.0%
GACAACATTGTCTGTCGATA+AGG + chr4_1:20806670-20806689 Msa0539660:intron 40.0%
ACTCATATCTCAAAAGGACG+TGG + chr4_1:20806847-20806866 Msa0539660:intron 40.0%
CTCATATCTCAAAAGGACGT+GGG + chr4_1:20806848-20806867 Msa0539660:intron 40.0%
AGATATGAAGACCTTGTTGG+TGG + chr4_1:20806886-20806905 Msa0539660:intron 40.0%
GATATGAAGACCTTGTTGGT+GGG + chr4_1:20806887-20806906 Msa0539660:intron 40.0%
TTGAATCTTGAGGTCTGACT+TGG + chr4_1:20806930-20806949 Msa0539660:intron 40.0%
TTAGGTAAGTTAAGTCGCAG+GGG - chr4_1:20806966-20806985 None:intergenic 40.0%
!! TGGTTTGTTTCCTGTCTTGA+TGG + chr4_1:20807023-20807042 Msa0539660:intron 40.0%
! GGTTTGTTTCCTGTCTTGAT+GGG + chr4_1:20807024-20807043 Msa0539660:intron 40.0%
GTTTGTTTCCTGTCTTGATG+GGG + chr4_1:20807025-20807044 Msa0539660:intron 40.0%
AGCAAATTGGATGTGTCATG+GGG - chr4_1:20807154-20807173 None:intergenic 40.0%
TAATGATAGCCAGAGCTTCT+TGG + chr4_1:20807174-20807193 Msa0539660:intron 40.0%
! GCTTCTTGGTTGATACCTTT+AGG + chr4_1:20807188-20807207 Msa0539660:intron 40.0%
!!! CGGGTTTCCTTGTTGTTTTA+TGG - chr4_1:20807624-20807643 None:intergenic 40.0%
!! CACTTTGGTTCTTTGTTGTG+TGG - chr4_1:20807693-20807712 None:intergenic 40.0%
CACACAACAAAGAACCAAAG+TGG + chr4_1:20807691-20807710 Msa0539660:intron 40.0%
TCAGCATAAAGACACACCAA+TGG - chr4_1:20807740-20807759 None:intergenic 40.0%
ATATTGAACGCCATGAGAAG+TGG - chr4_1:20807778-20807797 None:intergenic 40.0%
TCAAAATCACACATGGCAAC+AGG + chr4_1:20807839-20807858 Msa0539660:intron 40.0%
CTTTCGCCTCATTCCATTTA+AGG + chr4_1:20807922-20807941 Msa0539660:intron 40.0%
TGTCGTGATGCTTCCTTAAA+TGG - chr4_1:20807938-20807957 None:intergenic 40.0%
TGATCGTATCATCTTGCATC+AGG - chr4_1:20808035-20808054 None:intergenic 40.0%
TAAGGGCAGTTTATTGGAAG+GGG - chr4_1:20808109-20808128 None:intergenic 40.0%
CATAAGGGCAGTTTATTGGA+AGG - chr4_1:20808111-20808130 None:intergenic 40.0%
CTTCCAATAAACTGCCCTTA+TGG + chr4_1:20808109-20808128 Msa0539660:intron 40.0%
CAACCAACCAGTTAATGCAA+CGG - chr4_1:20808467-20808486 None:intergenic 40.0%
AATGTTGGATACCTGTAGCA+TGG + chr4_1:20808500-20808519 Msa0539660:intron 40.0%
!!! CGATTTTGAAATCTCCGCAA+TGG - chr4_1:20808616-20808635 None:intergenic 40.0%
!!! GTTACCGGCTCCATTTTTTA+AGG + chr4_1:20808708-20808727 Msa0539660:intron 40.0%
GGTGCATCAGTGTATTAGAT+AGG + chr4_1:20809437-20809456 Msa0539660:intron 40.0%
CATCAGTGTATTAGATAGGC+TGG + chr4_1:20809441-20809460 Msa0539660:intron 40.0%
TAATTACTGGTGCAGTTGCA+CGG + chr4_1:20809565-20809584 Msa0539660:intron 40.0%
! TATCCATGGCAGATTGACTT+GGG - chr4_1:20809598-20809617 None:intergenic 40.0%
CAACAACACGATCAATTTGC+TGG - chr4_1:20809730-20809749 None:intergenic 40.0%
! TCGTGTTGTTGAAGTTGTAG+AGG + chr4_1:20809739-20809758 Msa0539660:CDS 40.0%
! CTTTAAAAGGTCACGAAGTG+AGG + chr4_1:20809765-20809784 Msa0539660:CDS 40.0%
TTGCAAGACAAAACATGCTC+GGG + chr4_1:20810017-20810036 Msa0539660:CDS 40.0%
! TATCGATTGTGTAACTCCCT+AGG - chr4_1:20810047-20810066 None:intergenic 40.0%
AATTCATCACCAACGTAGGT+TGG + chr4_1:20810275-20810294 Msa0539660:intron 40.0%
ATTCATCACCAACGTAGGTT+GGG + chr4_1:20810276-20810295 Msa0539660:intron 40.0%
AGCTGGTAATTCTGCTACTA+AGG - chr4_1:20810597-20810616 None:intergenic 40.0%
CTCAAGGATAAAAGGTGGAT+TGG - chr4_1:20810651-20810670 None:intergenic 40.0%
AAGTGCTCAAGGATAAAAGG+TGG - chr4_1:20810656-20810675 None:intergenic 40.0%
! CTATCTCTTTCAAGTGCTCA+AGG - chr4_1:20810667-20810686 None:intergenic 40.0%
CTGACTAATCTGAATATCCC+AGG + chr4_1:20810818-20810837 Msa0539660:intron 40.0%
TATGTGGATTTCCAGGTTAG+TGG + chr4_1:20810934-20810953 Msa0539660:intron 40.0%
!! CTTATTTCTTGGCCCTTTTC+AGG + chr4_1:20811289-20811308 Msa0539660:intron 40.0%
! TCACAATTTTATCCTCGACC+AGG + chr4_1:20811382-20811401 Msa0539660:CDS 40.0%
ACCTCTACACGATAGTTTAG+AGG + chr4_1:20811478-20811497 Msa0539660:intron 40.0%
TACACGATAGTTTAGAGGCA+AGG + chr4_1:20811483-20811502 Msa0539660:intron 40.0%
! AGTTTAGAGGCAAGGTATCT+TGG + chr4_1:20811491-20811510 Msa0539660:intron 40.0%
GCATTAGCACCTAGAAAAAG+TGG - chr4_1:20811680-20811699 None:intergenic 40.0%
!! TGCCTACTCACTTGTTATGA+AGG + chr4_1:20811701-20811720 Msa0539660:intron 40.0%
!! GCCTACTCACTTGTTATGAA+GGG + chr4_1:20811702-20811721 Msa0539660:intron 40.0%
!! CCTACTCACTTGTTATGAAG+GGG + chr4_1:20811703-20811722 Msa0539660:intron 40.0%
TTCAGATGATTACCTTGGAG+AGG - chr4_1:20811954-20811973 None:intergenic 40.0%
! AATGTGCTGTTCATATGCCA+AGG + chr4_1:20811977-20811996 Msa0539660:intron 40.0%
TCCAAATTCTATTGGGCCTT+TGG - chr4_1:20812043-20812062 None:intergenic 40.0%
AAGGCCCAATAGAATTTGGA+TGG + chr4_1:20812043-20812062 Msa0539660:intron 40.0%
CCAGACCATCCAAATTCTAT+TGG - chr4_1:20812051-20812070 None:intergenic 40.0%
CCAATAGAATTTGGATGGTC+TGG + chr4_1:20812048-20812067 Msa0539660:intron 40.0%
GGCATAAGCATCTTACACAA+AGG - chr4_1:20812295-20812314 None:intergenic 40.0%
TGTAAGATGCTTATGCCAGA+GGG + chr4_1:20812298-20812317 Msa0539660:intron 40.0%
AAAATGAATAGGGACACCTG+CGG + chr4_1:20812378-20812397 Msa0539660:intron 40.0%
CTTCTCTTCACCACATTACT+TGG - chr4_1:20812421-20812440 None:intergenic 40.0%
GGCAGGTTCATGACAATAAA+AGG - chr4_1:20812658-20812677 None:intergenic 40.0%
!! AGATTTTGATGCGCAGGTTA+GGG + chr4_1:20812959-20812978 Msa0539660:intron 40.0%
TTAATATTCACTCCCTCCTC+TGG + chr4_1:20812982-20813001 Msa0539660:intron 40.0%
AGAAGTCACATGTTCAGAGT+AGG - chr4_1:20813122-20813141 None:intergenic 40.0%
TACTCTGAACATGTGACTTC+TGG + chr4_1:20813121-20813140 Msa0539660:intron 40.0%
! CTGAAGGTTGGTCATACAAA+GGG + chr4_1:20813199-20813218 Msa0539660:intron 40.0%
AGAGAAGACATTTCCTGAGT+AGG - chr4_1:20813376-20813395 None:intergenic 40.0%
ATTTGTTTGGATGGATACCG+AGG + chr4_1:20813548-20813567 Msa0539660:CDS 40.0%
! TGCAGATTCTTCCTTTTCCT+CGG - chr4_1:20813568-20813587 None:intergenic 40.0%
! TTGCTTTAGATCAGATCCTG+AGG - chr4_1:20813614-20813633 None:intergenic 40.0%
!! GTTGATAAAGCTCTTTTGGG+TGG + chr4_1:20813661-20813680 Msa0539660:CDS 40.0%
TGTTCTTTGGTCCCAGTAAA+AGG + chr4_1:20813738-20813757 Msa0539660:exon 40.0%
CTGGTGTGGTATACAATAAC+TGG + chr4_1:20813957-20813976 Msa0539660:three_prime_UTR 40.0%
! CCCAAATGAAAAGAGGGTAT+AGG - chr4_1:20814133-20814152 None:intergenic 40.0%
CATCATCTTCTCACTGATCT+GGG - chr4_1:20814398-20814417 None:intergenic 40.0%
TCATCATCTTCTCACTGATC+TGG - chr4_1:20814399-20814418 None:intergenic 40.0%
CTAAATCTCCAACCACAGTT+TGG + chr4_1:20814482-20814501 Msa0539660:three_prime_UTR 40.0%
! TACGACAGATTGAGAAGTGT+GGG - chr4_1:20814517-20814536 None:intergenic 40.0%
CTGCTGATATTGTTCGAATG+AGG - chr4_1:20814540-20814559 None:intergenic 40.0%
CTCATTCGAACAATATCAGC+AGG + chr4_1:20814538-20814557 Msa0539660:three_prime_UTR 40.0%
! ATATCAGCAGGTCTTGTAGT+TGG + chr4_1:20814550-20814569 Msa0539660:three_prime_UTR 40.0%
TCATCCAGATGAATTGGATG+AGG - chr4_1:20814590-20814609 None:intergenic 40.0%
ATGGTTGGCAGTATCAATTC+AGG + chr4_1:20814706-20814725 Msa0539660:three_prime_UTR 40.0%
TGGTTGGCAGTATCAATTCA+GGG + chr4_1:20814707-20814726 Msa0539660:three_prime_UTR 40.0%
TCGCATAATGTCACTACTCT+CGG - chr4_1:20814833-20814852 None:intergenic 40.0%
TTCTCCTTAGACTCCACATA+TGG + chr4_1:20814869-20814888 Msa0539660:three_prime_UTR 40.0%
AGCCAATCAATGTGTCTAAC+AGG + chr4_1:20814988-20815007 Msa0539660:three_prime_UTR 40.0%
TTGCACAGCTTGGGTTAATA+TGG - chr4_1:20815067-20815086 None:intergenic 40.0%
GACCACAAAGATCAGAGAAT+TGG - chr4_1:20815216-20815235 None:intergenic 40.0%
TTTGACAATCACCACCTCAA+TGG - chr4_1:20815246-20815265 None:intergenic 40.0%
GATGGAATGAGCAGTATACA+TGG - chr4_1:20815308-20815327 None:intergenic 40.0%
GTATACTGCTCATTCCATCT+AGG + chr4_1:20815309-20815328 Msa0539660:three_prime_UTR 40.0%
ATACTGCTCATTCCATCTAG+GGG + chr4_1:20815311-20815330 Msa0539660:three_prime_UTR 40.0%
!! CGGAATTTGCTACCTATGAA+GGG - chr4_1:20815423-20815442 None:intergenic 40.0%
CCTTCATAGGTAGCAAATTC+CGG + chr4_1:20815421-20815440 Msa0539660:three_prime_UTR 40.0%
CTTCATAGGTAGCAAATTCC+GGG + chr4_1:20815422-20815441 Msa0539660:three_prime_UTR 40.0%
ACATTGGATATCTCGAACTC+GGG - chr4_1:20815458-20815477 None:intergenic 40.0%
CACTTGAGGAGGAAAAACAT+TGG - chr4_1:20815474-20815493 None:intergenic 40.0%
TCATCTCCGAATTTGTCTTG+AGG - chr4_1:20815559-20815578 None:intergenic 40.0%
CAATCTTCATAGACCTAGTG+CGG - chr4_1:20815631-20815650 None:intergenic 40.0%
GAGAAATGTTCCGCAAAGAT+TGG - chr4_1:20815685-20815704 None:intergenic 40.0%
GTGACAGTTGAGGACAAATT+TGG - chr4_1:20815750-20815769 None:intergenic 40.0%
ATAAGCTCCTCGTTCCAAAT+AGG + chr4_1:20815807-20815826 Msa0539660:three_prime_UTR 40.0%
TAAGCTCCTCGTTCCAAATA+GGG + chr4_1:20815808-20815827 Msa0539660:three_prime_UTR 40.0%
! CTTTAACCCTATTTGGAACG+AGG - chr4_1:20815817-20815836 None:intergenic 40.0%
! TGAGAGGCTTTAACCCTATT+TGG - chr4_1:20815824-20815843 None:intergenic 40.0%
ACAAGGGTTTCTCAAATGAG+AGG - chr4_1:20815840-20815859 None:intergenic 40.0%
GAAGTCAGATGAGATTCACA+AGG - chr4_1:20815857-20815876 None:intergenic 40.0%
AGTTCCACAAGCTTCTGTTA+GGG - chr4_1:20815889-20815908 None:intergenic 40.0%
GGAACTCTTCCTTTATCATG+AGG + chr4_1:20815903-20815922 Msa0539660:three_prime_UTR 40.0%
!! TCTTAATGAAGTGCCGGTTA+GGG - chr4_1:20816180-20816199 None:intergenic 40.0%
!! ATCTTAATGAAGTGCCGGTT+AGG - chr4_1:20816181-20816200 None:intergenic 40.0%
! GCAAATCTTTGCGTTTTCGA+AGG - chr4_1:20816291-20816310 None:intergenic 40.0%
! GCAAAGATTTGCTTCCAAAC+AGG + chr4_1:20816299-20816318 Msa0539660:three_prime_UTR 40.0%
CCTTATGTGGAAGTGAAACT+TGG - chr4_1:20816368-20816387 None:intergenic 40.0%
CCAAGTTTCACTTCCACATA+AGG + chr4_1:20816365-20816384 Msa0539660:three_prime_UTR 40.0%
CTTCCTGTTATATCCATCAC+AGG + chr4_1:20816395-20816414 Msa0539660:three_prime_UTR 40.0%
!! CTTCCTGTGATGGATATAAC+AGG - chr4_1:20816401-20816420 None:intergenic 40.0%
AGCAAAAGAACTTCCTGTGA+TGG - chr4_1:20816411-20816430 None:intergenic 40.0%
GTATAAAGGAGGGAATAAGG+TGG - chr4_1:20816489-20816508 None:intergenic 40.0%
GAGGTATAAAGGAGGGAATA+AGG - chr4_1:20816492-20816511 None:intergenic 40.0%
! CTAGGTTGAGGTATAAAGGA+GGG - chr4_1:20816499-20816518 None:intergenic 40.0%
GTTTCCACCAATGCATATTC+TGG + chr4_1:20816536-20816555 Msa0539660:three_prime_UTR 40.0%
GAATCCAGAATATGCATTGG+TGG - chr4_1:20816543-20816562 None:intergenic 40.0%
GCAGAATCCAGAATATGCAT+TGG - chr4_1:20816546-20816565 None:intergenic 40.0%
GCATATTCTGGATTCTGCTT+TGG + chr4_1:20816548-20816567 Msa0539660:three_prime_UTR 40.0%
TTTGCACCATGATTAACAGG+AGG + chr4_1:20816662-20816681 Msa0539660:three_prime_UTR 40.0%
! GCTTTTCCTCCTGTTAATCA+TGG - chr4_1:20816671-20816690 None:intergenic 40.0%
TTTGCTTGTGAATGTTGTGG+AGG + chr4_1:20816941-20816960 Msa0539660:three_prime_UTR 40.0%
! TAGGGGGTGTATTAGCAAAA+GGG + chr4_1:20816981-20817000 Msa0539660:three_prime_UTR 40.0%
CTTGGAAAGGTGAGAATTTC+AGG - chr4_1:20817106-20817125 None:intergenic 40.0%
GCTCACAAAACAGTTGAAGT+TGG - chr4_1:20817175-20817194 None:intergenic 40.0%
!!! AGGATTTTGGTCTTGGTGTT+TGG + chr4_1:20817243-20817262 Msa0539660:three_prime_UTR 40.0%
! GCTGAACCTTTTCCATCTTT+TGG + chr4_1:20817316-20817335 Msa0539660:three_prime_UTR 40.0%
GAACTTTCCAACTCTCCTTT+AGG - chr4_1:20817569-20817588 None:intergenic 40.0%
! TGAAGATTTGCTCATCGGAG+CGG + chr4_1:20805774-20805793 Msa0539660:CDS 45.0%
CTGGTCAGCTTTCAGCATTT+GGG + chr4_1:20806180-20806199 Msa0539660:CDS 45.0%
AGCCATAGATCTGCTTCATC+AGG - chr4_1:20806224-20806243 None:intergenic 45.0%
CCAAGTAGACTAACCTCTGT+AGG - chr4_1:20806817-20806836 None:intergenic 45.0%
!! CCTACAGAGGTTAGTCTACT+TGG + chr4_1:20806814-20806833 Msa0539660:intron 45.0%
TAAGTCGCAGGGGCAAATTA+GGG - chr4_1:20806956-20806975 None:intergenic 45.0%
TTAAGTCGCAGGGGCAAATT+AGG - chr4_1:20806957-20806976 None:intergenic 45.0%
TATACCTTCCCCATCAAGAC+AGG - chr4_1:20807036-20807055 None:intergenic 45.0%
TGTGTCATGGGGGAAAGAAA+GGG - chr4_1:20807143-20807162 None:intergenic 45.0%
ATGTGTCATGGGGGAAAGAA+AGG - chr4_1:20807144-20807163 None:intergenic 45.0%
GCAAATTGGATGTGTCATGG+GGG - chr4_1:20807153-20807172 None:intergenic 45.0%
AGGTATCAACCAAGAAGCTC+TGG - chr4_1:20807186-20807205 None:intergenic 45.0%
TCATGGCGTTCAATATCAGC+CGG + chr4_1:20807782-20807801 Msa0539660:intron 45.0%
TCGTATCATCTTGCATCAGG+TGG - chr4_1:20808032-20808051 None:intergenic 45.0%
CGATGCAAGCCATTACATTG+TGG + chr4_1:20808551-20808570 Msa0539660:intron 45.0%
!! GTTTTGACAGTGGATCTCGT+TGG + chr4_1:20809112-20809131 Msa0539660:intron 45.0%
TCATTCTTGTGTATGGAGGC+AGG + chr4_1:20809416-20809435 Msa0539660:intron 45.0%
!! ATCCATGGCAGATTGACTTG+GGG - chr4_1:20809597-20809616 None:intergenic 45.0%
GTATCCATGGCAGATTGACT+TGG - chr4_1:20809599-20809618 None:intergenic 45.0%
TCACATCTCGACTTCCTTGA+GGG - chr4_1:20809676-20809695 None:intergenic 45.0%
TTCACATCTCGACTTCCTTG+AGG - chr4_1:20809677-20809696 None:intergenic 45.0%
AAGTCGAGATGTGAAAGAGC+TGG + chr4_1:20809682-20809701 Msa0539660:CDS 45.0%
GAGATGTGAAAGAGCTGGAA+GGG + chr4_1:20809687-20809706 Msa0539660:CDS 45.0%
TGCAAGACAAAACATGCTCG+GGG + chr4_1:20810018-20810037 Msa0539660:CDS 45.0%
TCACATGTGTGTGAGATGTG+AGG - chr4_1:20810227-20810246 None:intergenic 45.0%
AGTGAAGATACCGGAGCATA+TGG + chr4_1:20810347-20810366 Msa0539660:CDS 45.0%
TGTCTTACAGGTCGTGACAT+TGG + chr4_1:20810545-20810564 Msa0539660:intron 45.0%
GCACTTGAAAGAGATAGCAG+AGG + chr4_1:20810670-20810689 Msa0539660:CDS 45.0%
CTGAACTGGCACATGCAAAA+AGG - chr4_1:20810720-20810739 None:intergenic 45.0%
TACCTTAACTGAGCTTGTGC+CGG + chr4_1:20810887-20810906 Msa0539660:CDS 45.0%
GCCTCTAAACTATCGTGTAG+AGG - chr4_1:20811482-20811501 None:intergenic 45.0%
TGTTCATGCACAGAACCTAG+TGG - chr4_1:20811519-20811538 None:intergenic 45.0%
CCCCTTCATAACAAGTGAGT+AGG - chr4_1:20811706-20811725 None:intergenic 45.0%
!!! CTGCCTTTTTTTCCTCTCCA+AGG + chr4_1:20811939-20811958 Msa0539660:intron 45.0%
GCCAAAGGCCCAATAGAATT+TGG + chr4_1:20812039-20812058 Msa0539660:intron 45.0%
GTGTAAGATGCTTATGCCAG+AGG + chr4_1:20812297-20812316 Msa0539660:intron 45.0%
AATGAACGCAAGATACCCTC+TGG - chr4_1:20812316-20812335 None:intergenic 45.0%
ACCTGCGGCAAGAATGAAAA+AGG + chr4_1:20812393-20812412 Msa0539660:CDS 45.0%
!! ACCTTTTTCATTCTTGCCGC+AGG - chr4_1:20812397-20812416 None:intergenic 45.0%
AATCGTTCACGCCATACTCT+GGG + chr4_1:20812467-20812486 Msa0539660:CDS 45.0%
TTTCCTTCCATCCCAGAGTA+TGG - chr4_1:20812481-20812500 None:intergenic 45.0%
TGCATCTGATGGAGTTCACT+TGG + chr4_1:20812528-20812547 Msa0539660:CDS 45.0%
CTGATGGAGTTCACTTGGTA+AGG + chr4_1:20812533-20812552 Msa0539660:intron 45.0%
! CTTTTTCCTGGTACTTTGGC+AGG - chr4_1:20812675-20812694 None:intergenic 45.0%
!! ATGGTCAGATTTTGATGCGC+AGG + chr4_1:20812953-20812972 Msa0539660:intron 45.0%
!! CAGATTTTGATGCGCAGGTT+AGG + chr4_1:20812958-20812977 Msa0539660:intron 45.0%
! AAAAGAGAGGTTGTGATGGG+AGG + chr4_1:20813032-20813051 Msa0539660:intron 45.0%
AAAAAGAGAGGGTGGTGTAG+GGG - chr4_1:20813071-20813090 None:intergenic 45.0%
CAAAAAGAGAGGGTGGTGTA+GGG - chr4_1:20813072-20813091 None:intergenic 45.0%
GCACAGTCACCAAAAAGAGA+GGG - chr4_1:20813082-20813101 None:intergenic 45.0%
! GCTGAAGGTTGGTCATACAA+AGG + chr4_1:20813198-20813217 Msa0539660:intron 45.0%
ATTGCTCCAGACGATATGCT+TGG + chr4_1:20813241-20813260 Msa0539660:CDS 45.0%
GAACTTCCAAGCATATCGTC+TGG - chr4_1:20813250-20813269 None:intergenic 45.0%
TATGCTTGGAAGTTCAGCTC+TGG + chr4_1:20813255-20813274 Msa0539660:CDS 45.0%
TCTGGCCAAGATAACATCTG+TGG + chr4_1:20813273-20813292 Msa0539660:CDS 45.0%
CTGGCCAAGATAACATCTGT+GGG + chr4_1:20813274-20813293 Msa0539660:CDS 45.0%
CCTTCCCACAGATGTTATCT+TGG - chr4_1:20813281-20813300 None:intergenic 45.0%
CCAAGATAACATCTGTGGGA+AGG + chr4_1:20813278-20813297 Msa0539660:CDS 45.0%
AGATAACATCTGTGGGAAGG+TGG + chr4_1:20813281-20813300 Msa0539660:CDS 45.0%
TTGAGAAGACCGACAGTTCA+AGG + chr4_1:20813488-20813507 Msa0539660:CDS 45.0%
TGAGAAGACCGACAGTTCAA+GGG + chr4_1:20813489-20813508 Msa0539660:CDS 45.0%
TACAGTGTCCCTTGAACTGT+CGG - chr4_1:20813500-20813519 None:intergenic 45.0%
TTGGATGGATACCGAGGAAA+AGG + chr4_1:20813554-20813573 Msa0539660:CDS 45.0%
GTAGAAAGTGAACTTGCCTC+AGG + chr4_1:20813595-20813614 Msa0539660:CDS 45.0%
! AAGAAAGGAGCGTGAGAAAG+TGG + chr4_1:20813632-20813651 Msa0539660:CDS 45.0%
! AGAAAGGAGCGTGAGAAAGT+GGG + chr4_1:20813633-20813652 Msa0539660:CDS 45.0%
ATGAAGCAAGATGTGTGGTG+AGG - chr4_1:20813877-20813896 None:intergenic 45.0%
CGATCTTTCTTCACCTGTTG+TGG - chr4_1:20814211-20814230 None:intergenic 45.0%
GTTGGAGATTTAGCCACTCA+AGG - chr4_1:20814475-20814494 None:intergenic 45.0%
GTACGACAGATTGAGAAGTG+TGG - chr4_1:20814518-20814537 None:intergenic 45.0%
TGAAAGCCTAGCATCCATGT+GGG + chr4_1:20814624-20814643 Msa0539660:three_prime_UTR 45.0%
!! GGATTTGGAATTACCGGTTC+CGG - chr4_1:20814663-20814682 None:intergenic 45.0%
GGCTTAACGACATTTGCACT+TGG - chr4_1:20814789-20814808 None:intergenic 45.0%
CGCATAATGTCACTACTCTC+GGG - chr4_1:20814832-20814851 None:intergenic 45.0%
! TCAACTGATTCACGTCGAAG+TGG + chr4_1:20814913-20814932 Msa0539660:three_prime_UTR 45.0%
GAGGTTTACTTGCACAGCTT+GGG - chr4_1:20815076-20815095 None:intergenic 45.0%
TGAGGTTTACTTGCACAGCT+TGG - chr4_1:20815077-20815096 None:intergenic 45.0%
AAAGAATGGAGAGCTGCACT+TGG - chr4_1:20815103-20815122 None:intergenic 45.0%
CTAACTGTGATCACAGTGCA+TGG + chr4_1:20815270-20815289 Msa0539660:three_prime_UTR 45.0%
GAATGAGCAGTATACATGGG+AGG - chr4_1:20815304-20815323 None:intergenic 45.0%
GCATACTGTGTTGCCAAGTA+TGG - chr4_1:20815378-20815397 None:intergenic 45.0%
CTACCATCTTTGCCCTTCAT+AGG + chr4_1:20815408-20815427 Msa0539660:three_prime_UTR 45.0%
CTACCTATGAAGGGCAAAGA+TGG - chr4_1:20815414-20815433 None:intergenic 45.0%
!! CCGGAATTTGCTACCTATGA+AGG - chr4_1:20815424-20815443 None:intergenic 45.0%
CTCCTCAAGTGTTTCGAAGA+CGG + chr4_1:20815483-20815502 Msa0539660:three_prime_UTR 45.0%
ACCCTGCCTCAAGACAAATT+CGG + chr4_1:20815550-20815569 Msa0539660:three_prime_UTR 45.0%
TCCGAATTTGTCTTGAGGCA+GGG - chr4_1:20815554-20815573 None:intergenic 45.0%
GGAAGAAACGGAGAGAAAGA+AGG - chr4_1:20815601-20815620 None:intergenic 45.0%
AGATTGAACCAACGAGCATC+CGG + chr4_1:20815645-20815664 Msa0539660:three_prime_UTR 45.0%
TTTCCGGTCTCCAATCTTTG+CGG + chr4_1:20815672-20815691 Msa0539660:three_prime_UTR 45.0%
GAACGAGGAGCTTATGTTTG+TGG - chr4_1:20815802-20815821 None:intergenic 45.0%
TGAACCCTAACAGAAGCTTG+TGG + chr4_1:20815882-20815901 Msa0539660:three_prime_UTR 45.0%
GAGTTCCACAAGCTTCTGTT+AGG - chr4_1:20815890-20815909 None:intergenic 45.0%
! ATGAGTCTTTTCCTGAGGCA+TGG - chr4_1:20816046-20816065 None:intergenic 45.0%
! AGCTGATGAGTCTTTTCCTG+AGG - chr4_1:20816051-20816070 None:intergenic 45.0%
TCCTCCAATCTATACCACTG+AGG + chr4_1:20816131-20816150 Msa0539660:three_prime_UTR 45.0%
TCCTCAGTGGTATAGATTGG+AGG - chr4_1:20816135-20816154 None:intergenic 45.0%
! TCTTTGCGTTTTCGAAGGAG+AGG - chr4_1:20816286-20816305 None:intergenic 45.0%
AGGAAGTCTTGACCCTTATG+TGG - chr4_1:20816381-20816400 None:intergenic 45.0%
! GCTAGGTTGAGGTATAAAGG+AGG - chr4_1:20816500-20816519 None:intergenic 45.0%
! GCAGCTAGGTTGAGGTATAA+AGG - chr4_1:20816503-20816522 None:intergenic 45.0%
CATTCTCATGGTCATGGTCA+TGG - chr4_1:20816728-20816747 None:intergenic 45.0%
CCTTCTCATTCTCATGGTCA+TGG - chr4_1:20816734-20816753 None:intergenic 45.0%
CCATGACCATGAGAATGAGA+AGG + chr4_1:20816731-20816750 Msa0539660:three_prime_UTR 45.0%
CTTGTGAATGTTGTGGAGGA+GGG + chr4_1:20816945-20816964 Msa0539660:three_prime_UTR 45.0%
GAGGGTGAGAATTAGGTGTA+GGG + chr4_1:20816963-20816982 Msa0539660:three_prime_UTR 45.0%
AGGGTGAGAATTAGGTGTAG+GGG + chr4_1:20816964-20816983 Msa0539660:three_prime_UTR 45.0%
! GTAGGGGGTGTATTAGCAAA+AGG + chr4_1:20816980-20816999 Msa0539660:three_prime_UTR 45.0%
CAAGATGAACAGATTGGTGG+TGG - chr4_1:20817368-20817387 None:intergenic 45.0%
! TGAGAAGGCTAAGTTGGAGT+TGG + chr4_1:20817422-20817441 Msa0539660:three_prime_UTR 45.0%
! AAGGCTAAGTTGGAGTTGGA+GGG + chr4_1:20817426-20817445 Msa0539660:three_prime_UTR 45.0%
!!! TTATGTTATTTAATTTAATT+TGG + chr4_1:20809896-20809915 Msa0539660:intron 5.0%
!!! TATGTTATTTAATTTAATTT+GGG + chr4_1:20809897-20809916 Msa0539660:intron 5.0%
!!! ATTTTTTTTTTTTTTTTTGA+GGG - chr4_1:20811830-20811849 None:intergenic 5.0%
!!! TATTTTTTTTTTTTTTTTTG+AGG - chr4_1:20811831-20811850 None:intergenic 5.0%
!! GATAACGGAGAACGGAATCC+CGG - chr4_1:20805814-20805833 None:intergenic 50.0%
!! TGACGGAGGATAACGGAGAA+CGG - chr4_1:20805822-20805841 None:intergenic 50.0%
GATGAAGAACCTGAGTGCCA+GGG - chr4_1:20805909-20805928 None:intergenic 50.0%
AGATGAAGAACCTGAGTGCC+AGG - chr4_1:20805910-20805929 None:intergenic 50.0%
GCTGGTCAGCTTTCAGCATT+TGG + chr4_1:20806179-20806198 Msa0539660:CDS 50.0%
GTTTCCTGTCTTGATGGGGA+AGG + chr4_1:20807029-20807048 Msa0539660:intron 50.0%
GTGTCATGGGGGAAAGAAAG+GGG - chr4_1:20807142-20807161 None:intergenic 50.0%
! GGTCCAACGAAGTGTTTCTC+CGG - chr4_1:20807804-20807823 None:intergenic 50.0%
GGAATGAGGCGAAAGATAGC+AGG - chr4_1:20807917-20807936 None:intergenic 50.0%
!! GGAAGCATCACGACAGACAT+TGG + chr4_1:20807943-20807962 Msa0539660:intron 50.0%
CGTCGAACTGATGGCTATAG+CGG - chr4_1:20807980-20807999 None:intergenic 50.0%
GTGGTAAAATGCAGCCGATG+AGG + chr4_1:20808570-20808589 Msa0539660:intron 50.0%
TTGCAGATGCGATGCCATTG+CGG + chr4_1:20808599-20808618 Msa0539660:intron 50.0%
TGCGGCTGCAAATGTGTTTG+TGG + chr4_1:20808643-20808662 Msa0539660:intron 50.0%
GCGGCTGCAAATGTGTTTGT+GGG + chr4_1:20808644-20808663 Msa0539660:intron 50.0%
GCATGGGTTTCGTATCTGCA+TGG + chr4_1:20808862-20808881 Msa0539660:intron 50.0%
AGGGCCCTTGAGAACCATTT+AGG - chr4_1:20808938-20808957 None:intergenic 50.0%
ACACAGCCAGCAACAACTAG+TGG - chr4_1:20809653-20809672 None:intergenic 50.0%
CGAGATGTGAAAGAGCTGGA+AGG + chr4_1:20809686-20809705 Msa0539660:CDS 50.0%
CTGGAAGGGATCAGCATTGT+AGG + chr4_1:20809701-20809720 Msa0539660:CDS 50.0%
!! AAGCGCTGGCAATGTCTTAC+GGG - chr4_1:20809798-20809817 None:intergenic 50.0%
!! CAAGCGCTGGCAATGTCTTA+CGG - chr4_1:20809799-20809818 None:intergenic 50.0%
CACACACACACACACACATC+CGG + chr4_1:20810186-20810205 Msa0539660:intron 50.0%
ACACACACACACACACATCC+GGG + chr4_1:20810187-20810206 Msa0539660:intron 50.0%
TTTACACGCCCAACCTACGT+TGG - chr4_1:20810287-20810306 None:intergenic 50.0%
GGTTGGGCGTGTAAAATCTG+TGG + chr4_1:20810292-20810311 Msa0539660:intron 50.0%
TGGCTGAGCAGTGAAGATAC+CGG + chr4_1:20810338-20810357 Msa0539660:CDS 50.0%
AGCATAGTGCTTGCATCAGC+TGG - chr4_1:20810614-20810633 None:intergenic 50.0%
GCAAGCACTATGCTGCGTAT+TGG + chr4_1:20810620-20810639 Msa0539660:CDS 50.0%
TTGCATGTGCCAGTTCAGTC+TGG + chr4_1:20810722-20810741 Msa0539660:CDS 50.0%
GCATCACTTCCAGACTGAAC+TGG - chr4_1:20810734-20810753 None:intergenic 50.0%
ACCTTAACTGAGCTTGTGCC+GGG + chr4_1:20810888-20810907 Msa0539660:CDS 50.0%
! CAAGGTATCTTGGCTCCACT+AGG + chr4_1:20811501-20811520 Msa0539660:intron 50.0%
ATTCTATTGGGCCTTTGGCC+CGG - chr4_1:20812038-20812057 None:intergenic 50.0%
GAATCGTTCACGCCATACTC+TGG + chr4_1:20812466-20812485 Msa0539660:CDS 50.0%
!! CTCTGGGATGGAAGGAAAAG+TGG + chr4_1:20812483-20812502 Msa0539660:CDS 50.0%
! CATGAACCTGCCAAAGTACC+AGG + chr4_1:20812666-20812685 Msa0539660:intron 50.0%
CCAATAGCATAGCCATGTCC+CGG + chr4_1:20812846-20812865 Msa0539660:intron 50.0%
CCAAAAAGAGAGGGTGGTGT+AGG - chr4_1:20813073-20813092 None:intergenic 50.0%
! CCTACACCACCCTCTCTTTT+TGG + chr4_1:20813070-20813089 Msa0539660:intron 50.0%
CAGTCACCAAAAAGAGAGGG+TGG - chr4_1:20813079-20813098 None:intergenic 50.0%
CGCACAGTCACCAAAAAGAG+AGG - chr4_1:20813083-20813102 None:intergenic 50.0%
AACATCTGTGGGAAGGTGGT+CGG + chr4_1:20813285-20813304 Msa0539660:CDS 50.0%
GAACAAGCAGGTTCCTACTC+AGG + chr4_1:20813360-20813379 Msa0539660:CDS 50.0%
AGCCAGAATCGTGTGCTTGT+GGG + chr4_1:20813434-20813453 Msa0539660:CDS 50.0%
TTCCCACAAGCACACGATTC+TGG - chr4_1:20813439-20813458 None:intergenic 50.0%
TCTTCATGCTGCGTCATCCT+CGG - chr4_1:20814324-20814343 None:intergenic 50.0%
! ACTGAGTTGGAGAGACTCGA+GGG - chr4_1:20814434-20814453 None:intergenic 50.0%
! TACTGAGTTGGAGAGACTCG+AGG - chr4_1:20814435-20814454 None:intergenic 50.0%
CGAGTCTCTCCAACTCAGTA+AGG + chr4_1:20814435-20814454 Msa0539660:three_prime_UTR 50.0%
GAGCTCAAGCCTTACTGAGT+TGG - chr4_1:20814447-20814466 None:intergenic 50.0%
TTGAGCTCTTTCGCCTTGAG+TGG + chr4_1:20814459-20814478 Msa0539660:three_prime_UTR 50.0%
GGTAGAGTCCAAACTGTGGT+TGG - chr4_1:20814493-20814512 None:intergenic 50.0%
! GACAGATTGAGAAGTGTGGG+AGG - chr4_1:20814514-20814533 None:intergenic 50.0%
CATGGATGCTAGGCTTTCAC+AGG - chr4_1:20814623-20814642 None:intergenic 50.0%
GTGAAAGCCTAGCATCCATG+TGG + chr4_1:20814623-20814642 Msa0539660:three_prime_UTR 50.0%
GAAAGCCTAGCATCCATGTG+GGG + chr4_1:20814625-20814644 Msa0539660:three_prime_UTR 50.0%
! ACTGATTCACGTCGAAGTGG+CGG + chr4_1:20814916-20814935 Msa0539660:three_prime_UTR 50.0%
CTATCAGGCCATGCAGATTG+TGG - chr4_1:20814965-20814984 None:intergenic 50.0%
CAATCTGCATGGCCTGATAG+CGG + chr4_1:20814965-20814984 Msa0539660:three_prime_UTR 50.0%
! CATTGATTGGCTCCGCTATC+AGG - chr4_1:20814980-20814999 None:intergenic 50.0%
TGTGGTCACTGCTACCATTG+AGG + chr4_1:20815229-20815248 Msa0539660:three_prime_UTR 50.0%
TTGACACACTGTCCCCTAGA+TGG - chr4_1:20815326-20815345 None:intergenic 50.0%
AACTCGGGATACTTAGTGCC+CGG - chr4_1:20815443-20815462 None:intergenic 50.0%
CGTCTTCGAAACACTTGAGG+AGG - chr4_1:20815485-20815504 None:intergenic 50.0%
AGCCGTCTTCGAAACACTTG+AGG - chr4_1:20815488-20815507 None:intergenic 50.0%
CTCCGAATTTGTCTTGAGGC+AGG - chr4_1:20815555-20815574 None:intergenic 50.0%
TTCATAGACCTAGTGCGGTC+GGG - chr4_1:20815626-20815645 None:intergenic 50.0%
CTTCATAGACCTAGTGCGGT+CGG - chr4_1:20815627-20815646 None:intergenic 50.0%
ATTGGAGACCGGAAAGCTTC+CGG - chr4_1:20815667-20815686 None:intergenic 50.0%
GTTCCGCAAAGATTGGAGAC+CGG - chr4_1:20815678-20815697 None:intergenic 50.0%
! TGTGGCAGCTGAACCTTTTG+AGG - chr4_1:20815784-20815803 None:intergenic 50.0%
GCTTCTGTTAGGGTTCAGCT+AGG - chr4_1:20815879-20815898 None:intergenic 50.0%
GGCTCCTCAGTGGTATAGAT+TGG - chr4_1:20816138-20816157 None:intergenic 50.0%
CTATACCACTGAGGAGCCAA+AGG + chr4_1:20816140-20816159 Msa0539660:three_prime_UTR 50.0%
! ATAGTCCTTTGGCTCCTCAG+TGG - chr4_1:20816148-20816167 None:intergenic 50.0%
TGAGGAGCCAAAGGACTATC+CGG + chr4_1:20816149-20816168 Msa0539660:three_prime_UTR 50.0%
TACCTCAACCTAGCTGCAAG+TGG + chr4_1:20816506-20816525 Msa0539660:three_prime_UTR 50.0%
ACAGGAGGAAAAGCAGAAGC+AGG + chr4_1:20816677-20816696 Msa0539660:three_prime_UTR 50.0%
CATGGTCATGGTCATGGTCA+TGG - chr4_1:20816716-20816735 None:intergenic 50.0%
GGAATTTCCTCATCAGGGTC+AGG + chr4_1:20816893-20816912 Msa0539660:three_prime_UTR 50.0%
ATTTGAGCCTGACCCTGATG+AGG - chr4_1:20816903-20816922 None:intergenic 50.0%
GCTTGTGAATGTTGTGGAGG+AGG + chr4_1:20816944-20816963 Msa0539660:three_prime_UTR 50.0%
TGTGGAGGAGGGTGAGAATT+AGG + chr4_1:20816956-20816975 Msa0539660:three_prime_UTR 50.0%
GGAGGGTGAGAATTAGGTGT+AGG + chr4_1:20816962-20816981 Msa0539660:three_prime_UTR 50.0%
GGGTGAGAATTAGGTGTAGG+GGG + chr4_1:20816965-20816984 Msa0539660:three_prime_UTR 50.0%
! GAAGGCTAAGTTGGAGTTGG+AGG + chr4_1:20817425-20817444 Msa0539660:three_prime_UTR 50.0%
CTTCTTCGTTGCAACGCCGA+CGG - chr4_1:20805845-20805864 None:intergenic 55.0%
! GGGATTGAGGGTGAAGGTGT+AGG - chr4_1:20805889-20805908 None:intergenic 55.0%
ACACCTTCACCCTCAATCCC+TGG + chr4_1:20805889-20805908 Msa0539660:CDS 55.0%
ACCTGAGTGCCAGGGATTGA+GGG - chr4_1:20805901-20805920 None:intergenic 55.0%
AACCTGAGTGCCAGGGATTG+AGG - chr4_1:20805902-20805921 None:intergenic 55.0%
TCATGGGGGAAAGAAAGGGG+TGG - chr4_1:20807139-20807158 None:intergenic 55.0%
CAGCCGGAGAAACACTTCGT+TGG + chr4_1:20807798-20807817 Msa0539660:intron 55.0%
GAAGTGGCTCGTCGAACTGA+TGG - chr4_1:20807989-20808008 None:intergenic 55.0%
GTCCCCAAGTCAATCTGCCA+TGG + chr4_1:20809592-20809611 Msa0539660:CDS 55.0%
! ACCTTTGGAAGGTCAAGCGC+TGG - chr4_1:20809812-20809831 None:intergenic 55.0%
AAACATGCTCGGGGTCACCT+AGG + chr4_1:20810027-20810046 Msa0539660:CDS 55.0%
AACATGCTCGGGGTCACCTA+GGG + chr4_1:20810028-20810047 Msa0539660:CDS 55.0%
GTGCGCAAATGTGTGCAGGA+GGG - chr4_1:20810121-20810140 None:intergenic 55.0%
TGTGCGCAAATGTGTGCAGG+AGG - chr4_1:20810122-20810141 None:intergenic 55.0%
GTGTGTGCGCAAATGTGTGC+AGG - chr4_1:20810125-20810144 None:intergenic 55.0%
CCTTAACTGAGCTTGTGCCG+GGG + chr4_1:20810889-20810908 Msa0539660:CDS 55.0%
TCAGTGGCAATCTGCATCCC+CGG - chr4_1:20810909-20810928 None:intergenic 55.0%
AATAGTTGCCACCGGGCCAA+AGG + chr4_1:20812024-20812043 Msa0539660:intron 55.0%
! GTTCACGCCATACTCTGGGA+TGG + chr4_1:20812471-20812490 Msa0539660:CDS 55.0%
!! ACGCCATACTCTGGGATGGA+AGG + chr4_1:20812475-20812494 Msa0539660:CDS 55.0%
CCGGGACATGGCTATGCTAT+TGG - chr4_1:20812849-20812868 None:intergenic 55.0%
ATAGCATAGCCATGTCCCGG+AGG + chr4_1:20812849-20812868 Msa0539660:intron 55.0%
TAGCATAGCCATGTCCCGGA+GGG + chr4_1:20812850-20812869 Msa0539660:intron 55.0%
ACATCCTAGACAGCACCCTC+CGG - chr4_1:20812868-20812887 None:intergenic 55.0%
!! GAGGGTGCTGTCTAGGATGT+GGG + chr4_1:20812868-20812887 Msa0539660:intron 55.0%
!! GTGGGAAGGTGGTCGGTTTT+CGG + chr4_1:20813292-20813311 Msa0539660:CDS 55.0%
!! TGGGAAGGTGGTCGGTTTTC+GGG + chr4_1:20813293-20813312 Msa0539660:CDS 55.0%
GAGCCAGAATCGTGTGCTTG+TGG + chr4_1:20813433-20813452 Msa0539660:CDS 55.0%
! GGCAGTTTGCTTCGAAACCG+AGG + chr4_1:20814304-20814323 Msa0539660:three_prime_UTR 55.0%
GAGGATGACGCAGCATGAAG+AGG + chr4_1:20814323-20814342 Msa0539660:three_prime_UTR 55.0%
GGGAGGTAGAGTCCAAACTG+TGG - chr4_1:20814497-20814516 None:intergenic 55.0%
ATCCACCCCACATGGATGCT+AGG - chr4_1:20814633-20814652 None:intergenic 55.0%
! TCCATGTGGGGTGGATTCCT+TGG + chr4_1:20814637-20814656 Msa0539660:three_prime_UTR 55.0%
CCATGCAGATTGTGGCAGCA+AGG - chr4_1:20814957-20814976 None:intergenic 55.0%
CCTTGCTGCCACAATCTGCA+TGG + chr4_1:20814954-20814973 Msa0539660:three_prime_UTR 55.0%
GGTCACTGCTACCATTGAGG+TGG + chr4_1:20815232-20815251 Msa0539660:three_prime_UTR 55.0%
TCATAGACCTAGTGCGGTCG+GGG - chr4_1:20815625-20815644 None:intergenic 55.0%
GAAAGCTTCCGGATGCTCGT+TGG - chr4_1:20815656-20815675 None:intergenic 55.0%
ACGAGCATCCGGAAGCTTTC+CGG + chr4_1:20815656-20815675 Msa0539660:three_prime_UTR 55.0%
CCTCTCGAATACGCGATCGA+AGG - chr4_1:20815991-20816010 None:intergenic 55.0%
CCTTCGATCGCGTATTCGAG+AGG + chr4_1:20815988-20816007 Msa0539660:three_prime_UTR 55.0%
GCATCAGAATGCCATGCCTC+AGG + chr4_1:20816032-20816051 Msa0539660:three_prime_UTR 55.0%
CACCACTTGCAGCTAGGTTG+AGG - chr4_1:20816511-20816530 None:intergenic 55.0%
CTCAACCTAGCTGCAAGTGG+TGG + chr4_1:20816509-20816528 Msa0539660:three_prime_UTR 55.0%
GGAAAAGCAGAAGCAGGAGC+AGG + chr4_1:20816683-20816702 Msa0539660:three_prime_UTR 55.0%
TTGCTCATCGGAGCGGCTAC+CGG + chr4_1:20805781-20805800 Msa0539660:CDS 60.0%
AACGGAGAACGGAATCCCGG+TGG - chr4_1:20805811-20805830 None:intergenic 60.0%
!! CCGACGGTGACGGAGGATAA+CGG - chr4_1:20805829-20805848 None:intergenic 60.0%
CCGTTATCCTCCGTCACCGT+CGG + chr4_1:20805826-20805845 Msa0539660:CDS 60.0%
GTGCCAGGGATTGAGGGTGA+AGG - chr4_1:20805895-20805914 None:intergenic 60.0%
ACCCTCAATCCCTGGCACTC+AGG + chr4_1:20805897-20805916 Msa0539660:CDS 60.0%
TGGGGGAAAGAAAGGGGTGG+CGG - chr4_1:20807136-20807155 None:intergenic 60.0%
! GTTGCTGGCTGTGTCCCTCA+AGG + chr4_1:20809659-20809678 Msa0539660:CDS 60.0%
GCCAGCGCTTGACCTTCCAA+AGG + chr4_1:20809808-20809827 Msa0539660:CDS 60.0%
CCCCGGCACAAGCTCAGTTA+AGG - chr4_1:20810892-20810911 None:intergenic 60.0%
CCAGATCACACACCTGGTCG+AGG - chr4_1:20811397-20811416 None:intergenic 60.0%
CCTCGACCAGGTGTGTGATC+TGG + chr4_1:20811394-20811413 Msa0539660:intron 60.0%
GCTGTGCCAGATCACACACC+TGG - chr4_1:20811403-20811422 None:intergenic 60.0%
CATCCTAGACAGCACCCTCC+GGG - chr4_1:20812867-20812886 None:intergenic 60.0%
!! GGAGGGTGCTGTCTAGGATG+TGG + chr4_1:20812867-20812886 Msa0539660:intron 60.0%
TCACTCCCTCCTCTGGTCTC+AGG + chr4_1:20812989-20813008 Msa0539660:intron 60.0%
CACTCCCTCCTCTGGTCTCA+GGG + chr4_1:20812990-20813009 Msa0539660:intron 60.0%
ACAAGAGGCCCTGAGACCAG+AGG - chr4_1:20813001-20813020 None:intergenic 60.0%
!! GGGAAGGTGGTCGGTTTTCG+GGG + chr4_1:20813294-20813313 Msa0539660:CDS 60.0%
AGCCTAGCATCCATGTGGGG+TGG + chr4_1:20814628-20814647 Msa0539660:three_prime_UTR 60.0%
GCCAAGGAATCCACCCCACA+TGG - chr4_1:20814641-20814660 None:intergenic 60.0%
! TGTGGGGTGGATTCCTTGGC+CGG + chr4_1:20814641-20814660 Msa0539660:three_prime_UTR 60.0%
GTGGATTCCTTGGCCGGAAC+CGG + chr4_1:20814647-20814666 Msa0539660:three_prime_UTR 60.0%
!! GGAATTACCGGTTCCGGCCA+AGG - chr4_1:20814657-20814676 None:intergenic 60.0%
GAGAGCTGCACTTGGCTGTG+AGG - chr4_1:20815095-20815114 None:intergenic 60.0%
TGCGGTCGGGGAGGAAGAAA+CGG - chr4_1:20815613-20815632 None:intergenic 60.0%
GGAGCCAAAGGACTATCCGG+CGG + chr4_1:20816152-20816171 Msa0539660:three_prime_UTR 60.0%
GGTTCCGCCGGATAGTCCTT+TGG - chr4_1:20816159-20816178 None:intergenic 60.0%
CTATCCGGCGGAACCCTAAC+CGG + chr4_1:20816164-20816183 Msa0539660:three_prime_UTR 60.0%
CAGCTCCACCACTTGCAGCT+AGG - chr4_1:20816517-20816536 None:intergenic 60.0%
ACGGAATCCCGGTGGAGCTC+CGG - chr4_1:20805803-20805822 None:intergenic 65.0%
CGTTGCAACGCCGACGGTGA+CGG - chr4_1:20805839-20805858 None:intergenic 65.0%
CTATTGGGCCTTTGGCCCGG+TGG - chr4_1:20812035-20812054 None:intergenic 65.0%
AGACAGCACCCTCCGGGACA+TGG - chr4_1:20812861-20812880 None:intergenic 65.0%
!! TGTCCCGGAGGGTGCTGTCT+AGG + chr4_1:20812861-20812880 Msa0539660:intron 65.0%
GAGGCCCTGAGACCAGAGGA+GGG - chr4_1:20812997-20813016 None:intergenic 65.0%
AGAGGCCCTGAGACCAGAGG+AGG - chr4_1:20812998-20813017 None:intergenic 65.0%
TCTTCCTCCCCGACCGCACT+AGG + chr4_1:20815615-20815634 Msa0539660:three_prime_UTR 65.0%
TAGACCTAGTGCGGTCGGGG+AGG - chr4_1:20815622-20815641 None:intergenic 65.0%
!! AGTGCCGGTTAGGGTTCCGC+CGG - chr4_1:20816171-20816190 None:intergenic 65.0%
GCAGAAGCAGGAGCAGGAGC+AGG + chr4_1:20816689-20816708 Msa0539660:three_prime_UTR 65.0%
AGCGGCTACCGGAGCTCCAC+CGG + chr4_1:20805792-20805811 Msa0539660:CDS 70.0%
! TGCAACGCCGACGGTGACGG+AGG - chr4_1:20805836-20805855 None:intergenic 70.0%
GCGGCTACCGGAGCTCCACC+GGG + chr4_1:20805793-20805812 Msa0539660:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 20805713 20817657 20805713 ID=Msa0539660;Name=Msa0539660
chr4_1 mRNA 20805713 20817657 20805713 ID=Msa0539660-mRNA-1;Parent=Msa0539660;Name=Msa0539660-mRNA-1;_AED=0.02;_eAED=0.02;_QI=50|1|1|1|0.81|0.75|12|3858|618
chr4_1 exon 20805713 20805918 20805713 ID=Msa0539660-mRNA-1:exon:5935;Parent=Msa0539660-mRNA-1
chr4_1 exon 20806006 20806044 20806006 ID=Msa0539660-mRNA-1:exon:5936;Parent=Msa0539660-mRNA-1
chr4_1 exon 20806161 20806252 20806161 ID=Msa0539660-mRNA-1:exon:5937;Parent=Msa0539660-mRNA-1
chr4_1 exon 20809580 20809829 20809580 ID=Msa0539660-mRNA-1:exon:5938;Parent=Msa0539660-mRNA-1
chr4_1 exon 20809952 20810071 20809952 ID=Msa0539660-mRNA-1:exon:5939;Parent=Msa0539660-mRNA-1
chr4_1 exon 20810293 20810368 20810293 ID=Msa0539660-mRNA-1:exon:5940;Parent=Msa0539660-mRNA-1
chr4_1 exon 20810555 20810763 20810555 ID=Msa0539660-mRNA-1:exon:5941;Parent=Msa0539660-mRNA-1
chr4_1 exon 20810840 20810948 20810840 ID=Msa0539660-mRNA-1:exon:5942;Parent=Msa0539660-mRNA-1
chr4_1 exon 20811311 20811403 20811311 ID=Msa0539660-mRNA-1:exon:5943;Parent=Msa0539660-mRNA-1
chr4_1 exon 20812389 20812549 20812389 ID=Msa0539660-mRNA-1:exon:5944;Parent=Msa0539660-mRNA-1
chr4_1 exon 20813205 20817555 20813205 ID=Msa0539660-mRNA-1:exon:5945;Parent=Msa0539660-mRNA-1
chr4_1 exon 20817599 20817657 20817599 ID=Msa0539660-mRNA-1:exon:5946;Parent=Msa0539660-mRNA-1
chr4_1 five_prime_UTR 20805713 20805762 20805713 ID=Msa0539660-mRNA-1:five_prime_utr;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20805763 20805918 20805763 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20806006 20806044 20806006 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20806161 20806252 20806161 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20809580 20809829 20809580 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20809952 20810071 20809952 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20810293 20810368 20810293 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20810555 20810763 20810555 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20810840 20810948 20810840 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20811311 20811403 20811311 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20812389 20812549 20812389 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 CDS 20813205 20813756 20813205 ID=Msa0539660-mRNA-1:cds;Parent=Msa0539660-mRNA-1
chr4_1 three_prime_UTR 20813757 20817555 20813757 ID=Msa0539660-mRNA-1:three_prime_utr;Parent=Msa0539660-mRNA-1
chr4_1 three_prime_UTR 20817599 20817657 20817599 ID=Msa0539660-mRNA-1:three_prime_utr;Parent=Msa0539660-mRNA-1
Gene Sequence

>Msa0539660

ATGGAAGACATTGAAGATTTGCTCATCGGAGCGGCTACCGGAGCTCCACCGGGATTCCGTTCTCCGTTATCCTCCGTCACCGTCGGCGTTGCAACGAAGAAGATTCAACGCTCTTCACTTTTACCTACACCTTCACCCTCAATCCCTGGCACTCAGACGATTTTCATAAAGACATTTGGATGTTCTCATAACCAGAGTGATAGTGAATATATGGCTGGTCAGCTTTCAGCATTTGGGTATTCATTGAGTGATAATCCTGATGAAGCAGATCTATGGCTCATAAACACTTGCACGGTAAAGTCCCCAAGTCAATCTGCCATGGATACCATCATAACAAAAGGAAAATCTTCAAATAAACCACTAGTTGTTGCTGGCTGTGTCCCTCAAGGAAGTCGAGATGTGAAAGAGCTGGAAGGGATCAGCATTGTAGGAGTCCAGCAAATTGATCGTGTTGTTGAAGTTGTAGAGGAGACTTTAAAAGGTCACGAAGTGAGGCTTTTGACCCGTAAGACATTGCCAGCGCTTGACCTTCCAAAGGTGAGAAAGAACAAATTTGTTGAGATTCTTCCAATTAATGTTGGTTGTTTAGGTGCTTGCACTTATTGCAAGACAAAACATGCTCGGGGTCACCTAGGGAGTTACACAATCGATAGCCTTGTTGGGCGTGTAAAATCTGTGGTATCTGATGGAGTTAAAGAAATATGGCTGAGCAGTGAAGATACCGGAGCATATGGTCGTGACATTGGTGTCAATCTTCCAACTTTATTGAATGCCTTAGTAGCAGAATTACCAGCTGATGCAAGCACTATGCTGCGTATTGGAATGACCAATCCACCTTTTATCCTTGAGCACTTGAAAGAGATAGCAGAGGTTTTACGGCATCCATGTGTTTACTCCTTTTTGCATGTGCCAGTTCAGTCTGGAAGTGATGCTATTTTGAGTGCAATGAATCGAGAATATACTGTGGGTGAGTTCAGAACTGTTGTAGATACCTTAACTGAGCTTGTGCCGGGGATGCAGATTGCCACTGATATTATATGTGGATTTCCAGGTGAAACTGATGAAGATTTTGAGCAAACTGTCAACCTCATAAAAGAATACAAGTTCTCTCAAGTTCATATTTCACAATTTTATCCTCGACCAGGGACACCTGCGGCAAGAATGAAAAAGGTTCCAAGTAATGTGGTGAAGAGAAGAAGCCGTGAATTGACAACTGTCTTTGAATCGTTCACGCCATACTCTGGGATGGAAGGAAAAGTGGAAAGAATTTGGATTACTGATATTGCATCTGATGGAGTTCACTTGGTTGGTCATACAAAGGGATATATACAAGTTCTCGTAATTGCTCCAGACGATATGCTTGGAAGTTCAGCTCTGGCCAAGATAACATCTGTGGGAAGGTGGTCGGTTTTCGGGGAAGTAATTGAGACAATCAATCATGCAAGTGACAATAAAGCTTTGAACAAGCAGGTTCCTACTCAGGAAATGTCTTCTCTCTGTTGTAACCAAACCAAGACTTGTGAAATCTCAGAAGAGCCAGAATCGTGTGCTTGTGGGAATGTTGACAGCTGCTGCAGTCAGAGTACTCTTGAGAAGACCGACAGTTCAAGGGACACTGTAGTGCTGCCACAGAATCAAAATAACAAAAATTTGTTTGGATGGATACCGAGGAAAAGGAAGAATCTGCACAAAAGGGTAGAAAGTGAACTTGCCTCAGGATCTGATCTAAAGCAAGAAAGGAGCGTGAGAAAGTGGGACTTTGTTGATAAAGCTCTTTTGGGTGGAATCTCTATCAGCATCTTGACAATTATTGCTTTATTAGTTTGTTTTAGGTTTAGTGTTCTTTGGTCCCAGTAA
Protein sequence

>Msa0539660

MEDIEDLLIGAATGAPPGFRSPLSSVTVGVATKKIQRSSLLPTPSPSIPGTQTIFIKTFGCSHNQSDSEYMAGQLSAFGYSLSDNPDEADLWLINTCTVKSPSQSAMDTIITKGKSSNKPLVVAGCVPQGSRDVKELEGISIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVVSDGVKEIWLSSEDTGAYGRDIGVNLPTLLNALVAELPADASTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAILSAMNREYTVGEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFEQTVNLIKEYKFSQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTTVFESFTPYSGMEGKVERIWITDIASDGVHLVGHTKGYIQVLVIAPDDMLGSSALAKITSVGRWSVFGEVIETINHASDNKALNKQVPTQEMSSLCCNQTKTCEISEEPESCACGNVDSCCSQSTLEKTDSSRDTVVLPQNQNNKNLFGWIPRKRKNLHKRVESELASGSDLKQERSVRKWDFVDKALLGGISISILTIIALLVCFRFSVLWSQ*