Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425630 | XP_003630134.1 | 95.902 | 366 | 14 | 1 | 1 | 365 | 1 | 366 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425630 | sp|Q9FK88|INVE_ARATH | 61.957 | 368 | 102 | 7 | 3 | 365 | 1 | 335 | 1.43e-139 | 414 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425630 | G7LBD0 | 95.902 | 366 | 14 | 1 | 1 | 365 | 1 | 366 | 0.0 | 721 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005500 | Msa1425630 | 0.809687 | 1.672734e-50 | -8.615850e-47 |
| Msa0007810 | Msa1425630 | 0.813388 | 2.625794e-51 | -8.615850e-47 |
| Msa0011060 | Msa1425630 | 0.804066 | 2.581874e-49 | -8.615850e-47 |
| Msa0011100 | Msa1425630 | 0.804038 | 2.616523e-49 | -8.615850e-47 |
| Msa0011410 | Msa1425630 | 0.825905 | 3.631956e-54 | -8.615850e-47 |
| Msa0016370 | Msa1425630 | 0.816372 | 5.720014e-52 | -8.615850e-47 |
| Msa0021710 | Msa1425630 | 0.812796 | 3.540822e-51 | -8.615850e-47 |
| Msa0024240 | Msa1425630 | 0.823769 | 1.158681e-53 | -8.615850e-47 |
| Msa0037040 | Msa1425630 | 0.820264 | 7.518399e-53 | -8.615850e-47 |
| Msa0042760 | Msa1425630 | 0.802573 | 5.262976e-49 | -8.615850e-47 |
| Msa0044530 | Msa1425630 | 0.830703 | 2.529979e-55 | -8.615850e-47 |
| Msa0046700 | Msa1425630 | 0.814660 | 1.376143e-51 | -8.615850e-47 |
| Msa0048410 | Msa1425630 | 0.808657 | 2.780507e-50 | -8.615850e-47 |
| Msa0049670 | Msa1425630 | 0.843853 | 1.085531e-58 | -8.615850e-47 |
| Msa0054110 | Msa1425630 | 0.824998 | 5.955774e-54 | -8.615850e-47 |
| Msa0056220 | Msa1425630 | 0.858433 | 8.265945e-63 | -8.615850e-47 |
| Msa0056230 | Msa1425630 | 0.813906 | 2.018643e-51 | -8.615850e-47 |
| Msa0060080 | Msa1425630 | 0.805239 | 1.469370e-49 | -8.615850e-47 |
| Msa0066890 | Msa1425630 | 0.846529 | 2.051434e-59 | -8.615850e-47 |
| Msa0066990 | Msa1425630 | 0.800607 | 1.331430e-48 | -8.615850e-47 |
| Msa0069070 | Msa1425630 | 0.817139 | 3.849972e-52 | -8.615850e-47 |
| Msa0069230 | Msa1425630 | 0.852450 | 4.581378e-61 | -8.615850e-47 |
| Msa0069590 | Msa1425630 | 0.801841 | 7.444050e-49 | -8.615850e-47 |
| Msa0086620 | Msa1425630 | 0.823602 | 1.268194e-53 | -8.615850e-47 |
| Msa0091220 | Msa1425630 | 0.841564 | 4.401832e-58 | -8.615850e-47 |
| Msa0091240 | Msa1425630 | 0.834477 | 2.930169e-56 | -8.615850e-47 |
| Msa0105140 | Msa1425630 | 0.806969 | 6.352740e-50 | -8.615850e-47 |
| Msa1360070 | Msa1425630 | 0.825621 | 4.243006e-54 | -8.615850e-47 |
| Msa1362110 | Msa1425630 | 0.801965 | 7.020363e-49 | -8.615850e-47 |
| Msa1364520 | Msa1425630 | 0.853437 | 2.391173e-61 | -8.615850e-47 |
| Msa1374210 | Msa1425630 | 0.842101 | 3.176571e-58 | -8.615850e-47 |
| Msa1381340 | Msa1425630 | 0.809326 | 2.000034e-50 | -8.615850e-47 |
| Msa1381720 | Msa1425630 | 0.826485 | 2.644257e-54 | -8.615850e-47 |
| Msa1385940 | Msa1425630 | 0.816773 | 4.652354e-52 | -8.615850e-47 |
| Msa1389990 | Msa1425630 | 0.820788 | 5.700230e-53 | -8.615850e-47 |
| Msa1393600 | Msa1425630 | 0.833492 | 5.169846e-56 | -8.615850e-47 |
| Msa1409360 | Msa1425630 | 0.855678 | 5.371236e-62 | -8.615850e-47 |
| Msa1413220 | Msa1425630 | 0.859190 | 4.908583e-63 | -8.615850e-47 |
| Msa1421490 | Msa1425630 | 0.802982 | 4.331938e-49 | -8.615850e-47 |
| Msa1422820 | Msa1425630 | 0.819551 | 1.094245e-52 | -8.615850e-47 |
| Msa1425630 | Msa1426690 | 0.801125 | 1.043302e-48 | -8.615850e-47 |
| Msa1425630 | Msa1428230 | 0.810939 | 8.981337e-51 | -8.615850e-47 |
| Msa1425630 | Msa1433060 | 0.814032 | 1.893593e-51 | -8.615850e-47 |
| Msa1425630 | Msa1448410 | 0.827185 | 1.798937e-54 | -8.615850e-47 |
| Msa1425630 | Msa1451310 | 0.822454 | 2.348168e-53 | -8.615850e-47 |
| Msa1425630 | Msa1451690 | 0.809356 | 1.970397e-50 | -8.615850e-47 |
| Msa1425630 | Msa1452230 | 0.818750 | 1.665143e-52 | -8.615850e-47 |
| Msa1425630 | Msa1459130 | 0.811647 | 6.305857e-51 | -8.615850e-47 |
| Msa1425630 | Msa1462210 | 0.823107 | 1.655159e-53 | -8.615850e-47 |
| Msa0603180 | Msa1425630 | 0.802756 | 4.822732e-49 | -8.615850e-47 |
| Msa0604640 | Msa1425630 | 0.801018 | 1.097228e-48 | -8.615850e-47 |
| Msa0608280 | Msa1425630 | 0.801549 | 8.543778e-49 | -8.615850e-47 |
| Msa0617010 | Msa1425630 | 0.832345 | 9.969202e-56 | -8.615850e-47 |
| Msa0619480 | Msa1425630 | 0.813051 | 3.113049e-51 | -8.615850e-47 |
| Msa0622930 | Msa1425630 | 0.821249 | 4.464817e-53 | -8.615850e-47 |
| Msa0625550 | Msa1425630 | 0.843325 | 1.502137e-58 | -8.615850e-47 |
| Msa0654400 | Msa1425630 | 0.828394 | 9.214716e-55 | -8.615850e-47 |
| Msa0654500 | Msa1425630 | 0.803565 | 3.280892e-49 | -8.615850e-47 |
| Msa0659640 | Msa1425630 | 0.805102 | 1.569888e-49 | -8.615850e-47 |
| Msa0673990 | Msa1425630 | 0.824925 | 6.195941e-54 | -8.615850e-47 |
| Msa0676570 | Msa1425630 | 0.835407 | 1.708932e-56 | -8.615850e-47 |
| Msa0700430 | Msa1425630 | 0.806576 | 7.694071e-50 | -8.615850e-47 |
| Msa0700870 | Msa1425630 | 0.805864 | 1.086563e-49 | -8.615850e-47 |
| Msa0700930 | Msa1425630 | 0.804631 | 1.968771e-49 | -8.615850e-47 |
| Msa0701800 | Msa1425630 | 0.806556 | 7.766754e-50 | -8.615850e-47 |
| Msa0721420 | Msa1425630 | 0.822160 | 2.748015e-53 | -8.615850e-47 |
| Msa0729590 | Msa1425630 | 0.827700 | 1.353554e-54 | -8.615850e-47 |
| Msa0731740 | Msa1425630 | 0.833011 | 6.812263e-56 | -8.615850e-47 |
| Msa0733570 | Msa1425630 | 0.829038 | 6.438249e-55 | -8.615850e-47 |
| Msa0747660 | Msa1425630 | 0.805151 | 1.532738e-49 | -8.615850e-47 |
| Msa0752490 | Msa1425630 | 0.818419 | 1.979610e-52 | -8.615850e-47 |
| Msa0762390 | Msa1425630 | 0.810838 | 9.445050e-51 | -8.615850e-47 |
| Msa0762470 | Msa1425630 | 0.809798 | 1.583222e-50 | -8.615850e-47 |
| Msa0766910 | Msa1425630 | 0.801164 | 1.024293e-48 | -8.615850e-47 |
| Msa0774680 | Msa1425630 | 0.832289 | 1.028852e-55 | -8.615850e-47 |
| Msa0776590 | Msa1425630 | 0.812697 | 3.720557e-51 | -8.615850e-47 |
| Msa0800400 | Msa1425630 | 0.834449 | 2.977421e-56 | -8.615850e-47 |
| Msa0812230 | Msa1425630 | 0.829419 | 5.202135e-55 | -8.615850e-47 |
| Msa0821490 | Msa1425630 | 0.801637 | 8.196433e-49 | -8.615850e-47 |
| Msa0829750 | Msa1425630 | 0.804463 | 2.134384e-49 | -8.615850e-47 |
| Msa0133140 | Msa1425630 | 0.800942 | 1.137616e-48 | -8.615850e-47 |
| Msa0136180 | Msa1425630 | 0.820529 | 6.538232e-53 | -8.615850e-47 |
| Msa0137810 | Msa1425630 | 0.806666 | 7.363936e-50 | -8.615850e-47 |
| Msa0151380 | Msa1425630 | 0.827184 | 1.800187e-54 | -8.615850e-47 |
| Msa0154880 | Msa1425630 | 0.849768 | 2.615428e-60 | -8.615850e-47 |
| Msa0154890 | Msa1425630 | 0.813452 | 2.541812e-51 | -8.615850e-47 |
| Msa0177180 | Msa1425630 | 0.838456 | 2.845528e-57 | -8.615850e-47 |
| Msa0180540 | Msa1425630 | 0.811602 | 6.449811e-51 | -8.615850e-47 |
| Msa0186510 | Msa1425630 | 0.818277 | 2.132121e-52 | -8.615850e-47 |
| Msa0190750 | Msa1425630 | 0.804231 | 2.385329e-49 | -8.615850e-47 |
| Msa0211600 | Msa1425630 | 0.812176 | 4.835887e-51 | -8.615850e-47 |
| Msa0213590 | Msa1425630 | 0.824189 | 9.238033e-54 | -8.615850e-47 |
| Msa0218480 | Msa1425630 | 0.800173 | 1.632059e-48 | -8.615850e-47 |
| Msa0228360 | Msa1425630 | 0.838014 | 3.698622e-57 | -8.615850e-47 |
| Msa0232650 | Msa1425630 | 0.802152 | 6.424974e-49 | -8.615850e-47 |
| Msa1232640 | Msa1425630 | 0.853961 | 1.690169e-61 | -8.615850e-47 |
| Msa1235030 | Msa1425630 | 0.826692 | 2.359197e-54 | -8.615850e-47 |
| Msa1251960 | Msa1425630 | 0.819724 | 9.994153e-53 | -8.615850e-47 |
| Msa1252040 | Msa1425630 | 0.801028 | 1.092469e-48 | -8.615850e-47 |
| Msa1257860 | Msa1425630 | 0.801415 | 9.101629e-49 | -8.615850e-47 |
| Msa1264230 | Msa1425630 | 0.808264 | 3.372516e-50 | -8.615850e-47 |
| Msa1282570 | Msa1425630 | 0.811621 | 6.389332e-51 | -8.615850e-47 |
| Msa1298540 | Msa1425630 | 0.801389 | 9.215878e-49 | -8.615850e-47 |
| Msa1301410 | Msa1425630 | 0.806735 | 7.120004e-50 | -8.615850e-47 |
| Msa1313230 | Msa1425630 | 0.823088 | 1.672040e-53 | -8.615850e-47 |
| Msa1316160 | Msa1425630 | 0.809516 | 1.820265e-50 | -8.615850e-47 |
| Msa1332340 | Msa1425630 | 0.831503 | 1.609272e-55 | -8.615850e-47 |
| Msa1333220 | Msa1425630 | 0.835567 | 1.556971e-56 | -8.615850e-47 |
| Msa1335130 | Msa1425630 | 0.815639 | 8.341587e-52 | -8.615850e-47 |
| Msa1337520 | Msa1425630 | 0.856141 | 3.931431e-62 | -8.615850e-47 |
| Msa0372380 | Msa1425630 | 0.802998 | 4.300173e-49 | -8.615850e-47 |
| Msa0375930 | Msa1425630 | 0.823420 | 1.398626e-53 | -8.615850e-47 |
| Msa0377460 | Msa1425630 | 0.825393 | 4.804757e-54 | -8.615850e-47 |
| Msa0381370 | Msa1425630 | 0.819161 | 1.342951e-52 | -8.615850e-47 |
| Msa0385770 | Msa1425630 | 0.813444 | 2.551553e-51 | -8.615850e-47 |
| Msa0388790 | Msa1425630 | 0.848111 | 7.548189e-60 | -8.615850e-47 |
| Msa0404710 | Msa1425630 | 0.814599 | 1.419214e-51 | -8.615850e-47 |
| Msa0415210 | Msa1425630 | 0.800389 | 1.474940e-48 | -8.615850e-47 |
| Msa0422520 | Msa1425630 | 0.812071 | 5.096901e-51 | -8.615850e-47 |
| Msa0424570 | Msa1425630 | 0.823901 | 1.079345e-53 | -8.615850e-47 |
| Msa0426990 | Msa1425630 | 0.861777 | 8.081883e-64 | -8.615850e-47 |
| Msa0438150 | Msa1425630 | 0.811119 | 8.209562e-51 | -8.615850e-47 |
| Msa0462530 | Msa1425630 | 0.807557 | 4.767945e-50 | -8.615850e-47 |
| Msa0463820 | Msa1425630 | 0.824927 | 6.191702e-54 | -8.615850e-47 |
| Msa0473320 | Msa1425630 | 0.836126 | 1.123419e-56 | -8.615850e-47 |
| Msa0479890 | Msa1425630 | 0.803160 | 3.980465e-49 | -8.615850e-47 |
| Msa1007980 | Msa1425630 | 0.828404 | 9.161393e-55 | -8.615850e-47 |
| Msa1011140 | Msa1425630 | 0.855207 | 7.367546e-62 | -8.615850e-47 |
| Msa1020490 | Msa1425630 | 0.811767 | 5.939038e-51 | -8.615850e-47 |
| Msa1026160 | Msa1425630 | 0.826073 | 3.313753e-54 | -8.615850e-47 |
| Msa1033230 | Msa1425630 | 0.803183 | 3.935943e-49 | -8.615850e-47 |
| Msa1039440 | Msa1425630 | 0.801154 | 1.029166e-48 | -8.615850e-47 |
| Msa1049440 | Msa1425630 | 0.814192 | 1.746093e-51 | -8.615850e-47 |
| Msa1071460 | Msa1425630 | 0.830656 | 2.597349e-55 | -8.615850e-47 |
| Msa1079900 | Msa1425630 | 0.805856 | 1.090705e-49 | -8.615850e-47 |
| Msa1098070 | Msa1425630 | 0.869007 | 4.275400e-66 | -8.615850e-47 |
| Msa0258280 | Msa1425630 | 0.811214 | 7.831368e-51 | -8.615850e-47 |
| Msa0267320 | Msa1425630 | 0.844912 | 5.635230e-59 | -8.615850e-47 |
| Msa0270640 | Msa1425630 | 0.825584 | 4.328431e-54 | -8.615850e-47 |
| Msa0273780 | Msa1425630 | 0.802014 | 6.858447e-49 | -8.615850e-47 |
| Msa0293060 | Msa1425630 | 0.818876 | 1.558998e-52 | -8.615850e-47 |
| Msa0298590 | Msa1425630 | 0.816912 | 4.329855e-52 | -8.615850e-47 |
| Msa0311440 | Msa1425630 | 0.806356 | 8.560990e-50 | -8.615850e-47 |
| Msa0331070 | Msa1425630 | 0.801605 | 8.320321e-49 | -8.615850e-47 |
| Msa0363090 | Msa1425630 | 0.800401 | 1.466254e-48 | -8.615850e-47 |
| Msa1113780 | Msa1425630 | 0.809133 | 2.199601e-50 | -8.615850e-47 |
| Msa1132900 | Msa1425630 | 0.832544 | 8.898682e-56 | -8.615850e-47 |
| Msa1137240 | Msa1425630 | 0.846109 | 2.669380e-59 | -8.615850e-47 |
| Msa1140700 | Msa1425630 | 0.801615 | 8.280829e-49 | -8.615850e-47 |
| Msa1154770 | Msa1425630 | 0.812777 | 3.573559e-51 | -8.615850e-47 |
| Msa1160480 | Msa1425630 | 0.842860 | 1.997806e-58 | -8.615850e-47 |
| Msa1167560 | Msa1425630 | 0.804216 | 2.402688e-49 | -8.615850e-47 |
| Msa1175970 | Msa1425630 | 0.803326 | 3.677781e-49 | -8.615850e-47 |
| Msa1176830 | Msa1425630 | 0.847725 | 9.640188e-60 | -8.615850e-47 |
| Msa1179680 | Msa1425630 | 0.861607 | 9.109431e-64 | -8.615850e-47 |
| Msa1198420 | Msa1425630 | 0.809177 | 2.152512e-50 | -8.615850e-47 |
| Msa1207660 | Msa1425630 | 0.815825 | 7.581910e-52 | -8.615850e-47 |
| Msa1207770 | Msa1425630 | 0.806197 | 9.244965e-50 | -8.615850e-47 |
| Msa1211100 | Msa1425630 | 0.800789 | 1.222126e-48 | -8.615850e-47 |
| Msa1211120 | Msa1425630 | 0.812483 | 4.144111e-51 | -8.615850e-47 |
| Msa1212070 | Msa1425630 | 0.805093 | 1.576717e-49 | -8.615850e-47 |
| Msa1215660 | Msa1425630 | 0.812691 | 3.732381e-51 | -8.615850e-47 |
| Msa1219530 | Msa1425630 | 0.854055 | 1.587455e-61 | -8.615850e-47 |
| Msa1221370 | Msa1425630 | 0.833463 | 5.256149e-56 | -8.615850e-47 |
| Msa0483410 | Msa1425630 | 0.827204 | 1.780297e-54 | -8.615850e-47 |
| Msa0484590 | Msa1425630 | 0.832742 | 7.948149e-56 | -8.615850e-47 |
| Msa0486850 | Msa1425630 | 0.815075 | 1.112924e-51 | -8.615850e-47 |
| Msa0516000 | Msa1425630 | 0.826429 | 2.725877e-54 | -8.615850e-47 |
| Msa0517400 | Msa1425630 | 0.825136 | 5.526331e-54 | -8.615850e-47 |
| Msa0520560 | Msa1425630 | 0.800986 | 1.114267e-48 | -8.615850e-47 |
| Msa0523600 | Msa1425630 | 0.802934 | 4.431748e-49 | -8.615850e-47 |
| Msa0525180 | Msa1425630 | 0.822462 | 2.338596e-53 | -8.615850e-47 |
| Msa0539660 | Msa1425630 | 0.802489 | 5.474802e-49 | -8.615850e-47 |
| Msa0559440 | Msa1425630 | 0.804298 | 2.310209e-49 | -8.615850e-47 |
| Msa0564000 | Msa1425630 | 0.809966 | 1.457227e-50 | -8.615850e-47 |
| Msa0577290 | Msa1425630 | 0.816584 | 5.128608e-52 | -8.615850e-47 |
| Msa0577350 | Msa1425630 | 0.851939 | 6.401344e-61 | -8.615850e-47 |
| Msa0577960 | Msa1425630 | 0.844203 | 8.744947e-59 | -8.615850e-47 |
| Msa0581440 | Msa1425630 | 0.841575 | 4.371654e-58 | -8.615850e-47 |
| Msa0595470 | Msa1425630 | 0.802249 | 6.136433e-49 | -8.615850e-47 |
| Msa0597370 | Msa1425630 | 0.822464 | 2.335544e-53 | -8.615850e-47 |
| Msa0600280 | Msa1425630 | 0.802486 | 5.484851e-49 | -8.615850e-47 |
| Msa0850520 | Msa1425630 | 0.849977 | 2.286054e-60 | -8.615850e-47 |
| Msa0872800 | Msa1425630 | 0.811243 | 7.715867e-51 | -8.615850e-47 |
| Msa0872890 | Msa1425630 | 0.815030 | 1.139144e-51 | -8.615850e-47 |
| Msa0882270 | Msa1425630 | 0.805739 | 1.154290e-49 | -8.615850e-47 |
| Msa0882310 | Msa1425630 | 0.808940 | 2.418819e-50 | -8.615850e-47 |
| Msa0930160 | Msa1425630 | 0.811564 | 6.573790e-51 | -8.615850e-47 |
| Msa0967260 | Msa1425630 | 0.806034 | 1.000867e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425630 | MtrunA17_Chr8g0383361 | 95.902 | 366 | 14 | 1 | 1 | 365 | 1 | 366 | 0.0 | 721 |
| Msa1425630 | MtrunA17_Chr4g0068901 | 69.874 | 239 | 70 | 1 | 129 | 365 | 147 | 385 | 6.12e-116 | 352 |
| Msa1425630 | MtrunA17_Chr1g0192991 | 78.218 | 202 | 42 | 1 | 164 | 365 | 113 | 312 | 1.53e-112 | 341 |
| Msa1425630 | MtrunA17_Chr7g0271621 | 57.285 | 302 | 113 | 6 | 67 | 367 | 80 | 366 | 1.94e-109 | 335 |
| Msa1425630 | MtrunA17_Chr3g0145461 | 49.084 | 273 | 122 | 4 | 134 | 398 | 81 | 344 | 1.31e-78 | 253 |
| Msa1425630 | MtrunA17_Chr1g0200331 | 58.416 | 202 | 79 | 1 | 164 | 365 | 89 | 285 | 3.19e-77 | 249 |
| Msa1425630 | MtrunA17_Chr1g0200341 | 49.421 | 259 | 120 | 2 | 146 | 398 | 73 | 326 | 4.86e-77 | 248 |
| Msa1425630 | MtrunA17_Chr4g0038561 | 47.080 | 274 | 129 | 6 | 133 | 398 | 19 | 284 | 1.78e-68 | 225 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425630 | AT5G22510.2 | 61.957 | 368 | 102 | 7 | 3 | 365 | 1 | 335 | 1.45e-140 | 414 |
| Msa1425630 | AT5G22510.1 | 61.957 | 368 | 102 | 7 | 3 | 365 | 1 | 335 | 1.45e-140 | 414 |
| Msa1425630 | AT3G05820.1 | 70.782 | 243 | 68 | 2 | 125 | 367 | 112 | 351 | 4.33e-121 | 361 |
| Msa1425630 | AT3G05820.2 | 70.782 | 243 | 68 | 2 | 125 | 367 | 112 | 351 | 1.38e-119 | 361 |
| Msa1425630 | AT3G06500.1 | 67.200 | 250 | 73 | 2 | 125 | 365 | 134 | 383 | 4.46e-116 | 353 |
| Msa1425630 | AT1G56560.1 | 78.922 | 204 | 41 | 1 | 162 | 365 | 132 | 333 | 3.50e-115 | 349 |
| Msa1425630 | AT1G22650.2 | 52.917 | 240 | 103 | 2 | 164 | 398 | 72 | 306 | 1.52e-79 | 253 |
| Msa1425630 | AT4G09510.2 | 52.917 | 240 | 103 | 2 | 164 | 398 | 95 | 329 | 1.72e-79 | 252 |
| Msa1425630 | AT1G22650.1 | 52.917 | 240 | 103 | 2 | 164 | 398 | 72 | 306 | 7.18e-79 | 253 |
| Msa1425630 | AT1G35580.3 | 52.917 | 240 | 103 | 2 | 164 | 398 | 87 | 321 | 1.21e-78 | 250 |
| Msa1425630 | AT4G09510.1 | 52.917 | 240 | 103 | 2 | 164 | 398 | 95 | 329 | 2.21e-78 | 252 |
| Msa1425630 | AT4G34860.2 | 54.065 | 246 | 90 | 5 | 164 | 398 | 109 | 342 | 7.46e-78 | 251 |
| Msa1425630 | AT4G34860.1 | 54.065 | 246 | 90 | 5 | 164 | 398 | 109 | 342 | 7.46e-78 | 251 |
| Msa1425630 | AT4G34860.3 | 54.065 | 246 | 90 | 5 | 164 | 398 | 109 | 342 | 7.46e-78 | 251 |
| Msa1425630 | AT1G35580.2 | 52.917 | 240 | 103 | 2 | 164 | 398 | 87 | 321 | 8.09e-78 | 251 |
| Msa1425630 | AT1G35580.1 | 52.917 | 240 | 103 | 2 | 164 | 398 | 87 | 321 | 8.09e-78 | 251 |
| Msa1425630 | AT3G06500.2 | 79.562 | 137 | 28 | 0 | 229 | 365 | 48 | 184 | 8.57e-76 | 243 |
| Msa1425630 | AT1G72000.1 | 49.799 | 249 | 115 | 2 | 155 | 398 | 28 | 271 | 3.87e-75 | 242 |
Find 92 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCATTGTCTTCTTATCT+TGG | 0.169126 | tig0025883:+3683 | None:intergenic |
| CTCTGCAACAGAAGAGGTTT+TGG | 0.280737 | tig0025883:-1488 | Msa1425630:CDS |
| TTTAAAACCACCATGTCTTT+AGG | 0.281032 | tig0025883:-3100 | Msa1425630:exon |
| CGGGCATCCTTTGGAGATTC+AGG | 0.282200 | tig0025883:-1117 | Msa1425630:CDS |
| CAGAAACTGACACTGGTAAA+TGG | 0.302109 | tig0025883:+2899 | None:intergenic |
| TCATACAATTTGTTCGCAAC+TGG | 0.302118 | tig0025883:+2999 | None:intergenic |
| GTGCATTTATTTAGATAGAT+TGG | 0.302610 | tig0025883:-991 | Msa1425630:CDS |
| TTCAAAACATTGGTACTGTT+TGG | 0.308716 | tig0025883:+2524 | None:intergenic |
| CTCTGGGGATTTATCTGTTC+AGG | 0.310355 | tig0025883:-1267 | Msa1425630:CDS |
| GAAATCGATGGGGCCTTAAC+TGG | 0.345413 | tig0025883:+2921 | None:intergenic |
| TATTTAACTATTTCTTGTTA+AGG | 0.354643 | tig0025883:-1055 | Msa1425630:CDS |
| CGTGTTGCTCCTGTTGATTC+CGG | 0.364802 | tig0025883:-1436 | Msa1425630:intron |
| GGGCATACACGGGCATCCTT+TGG | 0.367981 | tig0025883:-1126 | Msa1425630:CDS |
| TTGTCATCCAATGTTACAAA+TGG | 0.378488 | tig0025883:-2671 | Msa1425630:CDS |
| AATTATTGTGGGAATCCTAT+AGG | 0.405671 | tig0025883:-2566 | Msa1425630:CDS |
| TTTGCAGCAATAGTTCCTAT+AGG | 0.407119 | tig0025883:+2551 | None:intergenic |
| TGCATTTATTTAGATAGATT+GGG | 0.409677 | tig0025883:-990 | Msa1425630:CDS |
| CGAGCATATGGAAAATGCTC+TGG | 0.418767 | tig0025883:-1284 | Msa1425630:CDS |
| TATCATACTCTCCCTTCAAT+AGG | 0.421624 | tig0025883:+2453 | None:intergenic |
| AGATGTTCAACTGTTGGAAC+AGG | 0.430733 | tig0025883:-2705 | Msa1425630:CDS |
| TGGAGTCGCTTTCCTATTGA+AGG | 0.447362 | tig0025883:-2465 | Msa1425630:CDS |
| TAAGGTTCGGACAGTTCCTC+TGG | 0.452150 | tig0025883:-1521 | Msa1425630:CDS |
| GACTTTGGAGAGGCAGCCAT+TGG | 0.458365 | tig0025883:-1460 | Msa1425630:CDS |
| TTGAAGCTTTGTCTTGCTGA+TGG | 0.459012 | tig0025883:-1209 | Msa1425630:CDS |
| AATGTGAGCGGCATAACTTC+AGG | 0.459764 | tig0025883:-2818 | Msa1425630:CDS |
| GAGAGAGTTGATGTGCAAAC+AGG | 0.461295 | tig0025883:-1245 | Msa1425630:CDS |
| CATTTACATGTCTGCAACCA+TGG | 0.467885 | tig0025883:+2854 | None:intergenic |
| GAGTCTGTAGTTAATTATTG+TGG | 0.473580 | tig0025883:-2578 | Msa1425630:CDS |
| CTGCAACCATGGATGACTAT+AGG | 0.473890 | tig0025883:+2865 | None:intergenic |
| TCTTCATACACTTCAGCTGC+AGG | 0.476188 | tig0025883:-2414 | Msa1425630:intron |
| GCATGCTTCAAAGCCAGTTA+AGG | 0.480695 | tig0025883:-2934 | Msa1425630:CDS |
| ATGGCTGCCTCTCCAAAGTC+AGG | 0.485283 | tig0025883:+1463 | None:intergenic |
| GTTTGAAGATGTTCAACTGT+TGG | 0.485786 | tig0025883:-2711 | Msa1425630:CDS |
| CCATCAGTTACTAATAATGT+TGG | 0.490435 | tig0025883:+1173 | None:intergenic |
| AGTCTGTAGTTAATTATTGT+GGG | 0.491436 | tig0025883:-2577 | Msa1425630:CDS |
| TGTCATCCAATGTTACAAAT+GGG | 0.492423 | tig0025883:-2670 | Msa1425630:CDS |
| TAAGGTTAGACAAGAAACTT+TGG | 0.492941 | tig0025883:-1037 | Msa1425630:CDS |
| CAGGAGACGGTAATGGATCA+AGG | 0.493037 | tig0025883:-2799 | Msa1425630:CDS |
| GGCAGTCCCATTTGTAACAT+TGG | 0.495902 | tig0025883:+2664 | None:intergenic |
| AACTGGGAAGTGTTGACAAA+AGG | 0.497494 | tig0025883:+3016 | None:intergenic |
| GAGCATATGGAAAATGCTCT+GGG | 0.507897 | tig0025883:-1283 | Msa1425630:CDS |
| CATCAGTTACTAATAATGTT+GGG | 0.514916 | tig0025883:+1174 | None:intergenic |
| CATACAATTTGTTCGCAACT+GGG | 0.525650 | tig0025883:+3000 | None:intergenic |
| CCAACATTATTAGTAACTGA+TGG | 0.529599 | tig0025883:-1173 | Msa1425630:CDS |
| CTCTATTGAGGAAGAAGCGT+GGG | 0.531182 | tig0025883:-2612 | Msa1425630:CDS |
| GGCTCATTATACGCGGATTG+AGG | 0.533659 | tig0025883:+3037 | None:intergenic |
| TATAGGAACTATTGCTGCAA+AGG | 0.534353 | tig0025883:-2549 | Msa1425630:CDS |
| GCAGGCATCAAACCTTGTCC+TGG | 0.538634 | tig0025883:+1550 | None:intergenic |
| CACTGGTAAATGGAAATCGA+TGG | 0.539558 | tig0025883:+2909 | None:intergenic |
| AATAGGAAAGCGACTCCAGA+TGG | 0.548635 | tig0025883:+2470 | None:intergenic |
| AATTAGCCTCAACTCTATTG+AGG | 0.549466 | tig0025883:-2624 | Msa1425630:CDS |
| GTCCGAACCTTAAAACTAGC+AGG | 0.549954 | tig0025883:+1532 | None:intergenic |
| GCATGCTAATGAATAAAGAC+AGG | 0.554403 | tig0025883:+1082 | None:intergenic |
| GCAGACATGTAAATGCCAAA+AGG | 0.561090 | tig0025883:-2846 | Msa1425630:CDS |
| AACAGGAGCAACACGGCCAA+TGG | 0.563132 | tig0025883:+1444 | None:intergenic |
| ACTGGTAAATGGAAATCGAT+GGG | 0.563971 | tig0025883:+2910 | None:intergenic |
| ATAACTTCAGGAGACGGTAA+TGG | 0.567558 | tig0025883:-2806 | Msa1425630:CDS |
| GATCGAAGGATGGGCATACA+CGG | 0.567712 | tig0025883:-1137 | Msa1425630:CDS |
| AGAAAAGATCCTCAAGGCAT+AGG | 0.570915 | tig0025883:-2976 | Msa1425630:CDS |
| ACAATGGATTGTCATAGTCC+AGG | 0.574008 | tig0025883:-1568 | Msa1425630:CDS |
| TTGGTCATAATTCAAAACAT+TGG | 0.578110 | tig0025883:+2514 | None:intergenic |
| CTTCTTCCTCAATAGAGTTG+AGG | 0.599582 | tig0025883:+2618 | None:intergenic |
| TTGCATGATAGATCGAAGGA+TGG | 0.604658 | tig0025883:-1147 | Msa1425630:CDS |
| ATCGAAGGATGGGCATACAC+GGG | 0.608184 | tig0025883:-1136 | Msa1425630:CDS |
| AGCGGCATAACTTCAGGAGA+CGG | 0.611888 | tig0025883:-2812 | Msa1425630:CDS |
| ATAAGACCTATAGTCATCCA+TGG | 0.612582 | tig0025883:-2871 | Msa1425630:CDS |
| GGAGTCGCTTTCCTATTGAA+GGG | 0.613769 | tig0025883:-2464 | Msa1425630:CDS |
| TCAGAGCTGGGAGAAAACAA+TGG | 0.616598 | tig0025883:-1584 | Msa1425630:intron |
| TAAAATCACGAATAAAGACT+TGG | 0.617406 | tig0025883:+2495 | None:intergenic |
| TGATGACTCTGCAACAGAAG+AGG | 0.617863 | tig0025883:-1494 | Msa1425630:CDS |
| AAGAAGCGTGGGATCTACTG+AGG | 0.619813 | tig0025883:-2601 | Msa1425630:CDS |
| TGCATGATAGATCGAAGGAT+GGG | 0.624079 | tig0025883:-1146 | Msa1425630:CDS |
| AACATGTGATCTCAGGGCTG+TGG | 0.624246 | tig0025883:-1322 | Msa1425630:intron |
| CGCGGATTGAGGAACAACAC+TGG | 0.624803 | tig0025883:+3048 | None:intergenic |
| ATGTGATCTCAGGGCTGTGG+TGG | 0.627914 | tig0025883:-1319 | Msa1425630:intron |
| GTTCGGACAGTTCCTCTGGA+AGG | 0.631939 | tig0025883:-1517 | Msa1425630:CDS |
| GTAAACACCTGAATCTCCAA+AGG | 0.633620 | tig0025883:+1110 | None:intergenic |
| TTTGGATCCTGACTTTGGAG+AGG | 0.640365 | tig0025883:-1470 | Msa1425630:CDS |
| GTTCTTGCATGATAGATCGA+AGG | 0.640874 | tig0025883:-1151 | Msa1425630:CDS |
| AGAAGCGTGGGATCTACTGA+GGG | 0.653271 | tig0025883:-2600 | Msa1425630:CDS |
| GTATGAAGAAAAGATCCTCA+AGG | 0.656724 | tig0025883:-2982 | Msa1425630:CDS |
| GATTGTCATAGTCCAGGACA+AGG | 0.659837 | tig0025883:-1562 | Msa1425630:CDS |
| CGGAATCAACAGGAGCAACA+CGG | 0.660716 | tig0025883:+1437 | None:intergenic |
| GGAAGCACCTAAAGACATGG+TGG | 0.668159 | tig0025883:+3093 | None:intergenic |
| TTTGGAAGCACCTAAAGACA+TGG | 0.673157 | tig0025883:+3090 | None:intergenic |
| ATAGTCACAGAAACTGACAC+TGG | 0.676501 | tig0025883:+2892 | None:intergenic |
| GACAAAAGGCTCATTATACG+CGG | 0.677479 | tig0025883:+3030 | None:intergenic |
| CAAAAGGCTGAAAATGTGAG+CGG | 0.689069 | tig0025883:-2830 | Msa1425630:CDS |
| ACTCTATTGAGGAAGAAGCG+TGG | 0.689990 | tig0025883:-2613 | Msa1425630:CDS |
| GCAGAGTCATCACCTTCCAG+AGG | 0.695873 | tig0025883:+1505 | None:intergenic |
| CTGGTAAATGGAAATCGATG+GGG | 0.725256 | tig0025883:+2911 | None:intergenic |
| AGCATATGGAAAATGCTCTG+GGG | 0.753456 | tig0025883:-1282 | Msa1425630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTTTTTAATTAATAC+CGG | - | tig0025883:1339-1358 | Msa1425630:intron | 10.0% |
| !!! | TGAAAGATTTTTTATAAAAA+GGG | + | tig0025883:2540-2559 | None:intergenic | 10.0% |
| !!! | TTGAAAGATTTTTTATAAAA+AGG | + | tig0025883:2541-2560 | None:intergenic | 10.0% |
| !!! | TAAATAACTCTTTTCATTAA+AGG | - | tig0025883:2932-2951 | Msa1425630:CDS | 15.0% |
| !!! | TATTTAACTATTTCTTGTTA+AGG | - | tig0025883:3618-3637 | Msa1425630:five_prime_UTR | 15.0% |
| !! | AGTTTCTAATAAAACAGTTA+AGG | + | tig0025883:1238-1257 | None:intergenic | 20.0% |
| !! | TTACCATTTGTATCTTAATT+AGG | - | tig0025883:1297-1316 | Msa1425630:CDS | 20.0% |
| !!! | TATTAAAATATTGGTTGAGA+TGG | + | tig0025883:1441-1460 | None:intergenic | 20.0% |
| !!! | ATTAGTTAATGTTTTCATCA+AGG | + | tig0025883:2699-2718 | None:intergenic | 20.0% |
| !! | AAACTTAACATAATACTTCT+TGG | - | tig0025883:3312-3331 | Msa1425630:intron | 20.0% |
| !! | TGCATTTATTTAGATAGATT+GGG | - | tig0025883:3683-3702 | Msa1425630:five_prime_UTR | 20.0% |
| ! | TACATGATGTAAATAAACAG+TGG | + | tig0025883:1277-1296 | None:intergenic | 25.0% |
| ! | TCACCTAATTAAGATACAAA+TGG | + | tig0025883:1303-1322 | None:intergenic | 25.0% |
| ! | TGAGAACTAGTTAACAAAAT+TGG | + | tig0025883:1489-1508 | None:intergenic | 25.0% |
| ! | GTAATCTAAATTTACTCTAC+AGG | - | tig0025883:1519-1538 | Msa1425630:CDS | 25.0% |
| ! | AGTCTGTAGTTAATTATTGT+GGG | - | tig0025883:2096-2115 | Msa1425630:intron | 25.0% |
| ! | TTGGTCATAATTCAAAACAT+TGG | + | tig0025883:2162-2181 | None:intergenic | 25.0% |
| ! | TAAAATCACGAATAAAGACT+TGG | + | tig0025883:2181-2200 | None:intergenic | 25.0% |
| ! | GAATTGTAATGACTAATGAA+TGG | + | tig0025883:2449-2468 | None:intergenic | 25.0% |
| ! | AAGGTTTATTACTAAAGGAA+GGG | - | tig0025883:2905-2924 | Msa1425630:CDS | 25.0% |
| !! | TAACTCTTTTCATTAAAGGA+AGG | - | tig0025883:2936-2955 | Msa1425630:CDS | 25.0% |
| !! | AACTCTTTTCATTAAAGGAA+GGG | - | tig0025883:2937-2956 | Msa1425630:CDS | 25.0% |
| !!! | CTAATGAAAAGTGTCATTTA+AGG | + | tig0025883:2964-2983 | None:intergenic | 25.0% |
| ! | CATTAGTAATCTTTCATTGT+TGG | - | tig0025883:2978-2997 | Msa1425630:CDS | 25.0% |
| ! | TACCACAAGAAAATACATAT+AGG | + | tig0025883:3021-3040 | None:intergenic | 25.0% |
| !!! | AATCCTATCAGTTATTTTAC+CGG | + | tig0025883:3259-3278 | None:intergenic | 25.0% |
| ! | GTAAAATAACTGATAGGATT+AGG | - | tig0025883:3259-3278 | Msa1425630:intron | 25.0% |
| ! | TTATTTAACATGTGATCTCA+GGG | - | tig0025883:3345-3364 | Msa1425630:intron | 25.0% |
| !!! | ATTATTTTACTACGAGCATA+TGG | - | tig0025883:3377-3396 | Msa1425630:intron | 25.0% |
| ! | CATCAGTTACTAATAATGTT+GGG | + | tig0025883:3502-3521 | None:intergenic | 25.0% |
| ! | GTGCATTTATTTAGATAGAT+TGG | - | tig0025883:3682-3701 | Msa1425630:five_prime_UTR | 25.0% |
| CTTTCATTGTCTTCTTATCT+TGG | + | tig0025883:993-1012 | None:intergenic | 30.0% | |
| !!! | CAAGTAAAGAGTGTTTTGAA+TGG | + | tig0025883:1199-1218 | None:intergenic | 30.0% |
| ATCTAAATTTACTCTACAGG+AGG | - | tig0025883:1522-1541 | Msa1425630:CDS | 30.0% | |
| !!! | GACATGGTGGTTTTAAAATA+AGG | + | tig0025883:1570-1589 | None:intergenic | 30.0% |
| ! | TTTAAAACCACCATGTCTTT+AGG | - | tig0025883:1573-1592 | Msa1425630:CDS | 30.0% |
| TATTAAAAACCTATGCCTTG+AGG | + | tig0025883:1709-1728 | None:intergenic | 30.0% | |
| TGATGTTGAAAAATCTAGTC+TGG | - | tig0025883:1905-1924 | Msa1425630:intron | 30.0% | |
| TTGTCATCCAATGTTACAAA+TGG | - | tig0025883:2002-2021 | Msa1425630:intron | 30.0% | |
| TGTCATCCAATGTTACAAAT+GGG | - | tig0025883:2003-2022 | Msa1425630:intron | 30.0% | |
| ! | AATTGTACCAAGATTTTTCG+TGG | + | tig0025883:2033-2052 | None:intergenic | 30.0% |
| GAGTCTGTAGTTAATTATTG+TGG | - | tig0025883:2095-2114 | Msa1425630:intron | 30.0% | |
| AATTATTGTGGGAATCCTAT+AGG | - | tig0025883:2107-2126 | Msa1425630:intron | 30.0% | |
| TTCAAAACATTGGTACTGTT+TGG | + | tig0025883:2152-2171 | None:intergenic | 30.0% | |
| ! | ATTCGTGATTTTATTCCATC+TGG | - | tig0025883:2188-2207 | Msa1425630:intron | 30.0% |
| TATTACTGATAGCATGTTCT+TGG | - | tig0025883:2298-2317 | Msa1425630:intron | 30.0% | |
| GACAACAAAAAAACTCAAGA+GGG | + | tig0025883:2518-2537 | None:intergenic | 30.0% | |
| TTAGTAATAAACCTTGTCCT+GGG | + | tig0025883:2900-2919 | None:intergenic | 30.0% | |
| TTTAGTAATAAACCTTGTCC+TGG | + | tig0025883:2901-2920 | None:intergenic | 30.0% | |
| AGGACAAGGTTTATTACTAA+AGG | - | tig0025883:2900-2919 | Msa1425630:CDS | 30.0% | |
| CAAGGTTTATTACTAAAGGA+AGG | - | tig0025883:2904-2923 | Msa1425630:CDS | 30.0% | |
| AGGTTTATTACTAAAGGAAG+GGG | - | tig0025883:2906-2925 | Msa1425630:CDS | 30.0% | |
| ! | ACTCTTTTCATTAAAGGAAG+GGG | - | tig0025883:2938-2957 | Msa1425630:CDS | 30.0% |
| TTTCATTGTTGGTACTTCTT+TGG | - | tig0025883:2989-3008 | Msa1425630:CDS | 30.0% | |
| ! | GACCTATATGTATTTTCTTG+TGG | - | tig0025883:3016-3035 | Msa1425630:CDS | 30.0% |
| AACATATACAATTTCAGAGC+TGG | - | tig0025883:3076-3095 | Msa1425630:CDS | 30.0% | |
| ACATATACAATTTCAGAGCT+GGG | - | tig0025883:3077-3096 | Msa1425630:CDS | 30.0% | |
| ATTCCGGTAAAATAACTGAT+AGG | - | tig0025883:3253-3272 | Msa1425630:intron | 30.0% | |
| CTTATTTAACATGTGATCTC+AGG | - | tig0025883:3344-3363 | Msa1425630:intron | 30.0% | |
| CCATCAGTTACTAATAATGT+TGG | + | tig0025883:3503-3522 | None:intergenic | 30.0% | |
| CCAACATTATTAGTAACTGA+TGG | - | tig0025883:3500-3519 | Msa1425630:intron | 30.0% | |
| TAAGGTTAGACAAGAAACTT+TGG | - | tig0025883:3636-3655 | Msa1425630:five_prime_UTR | 30.0% | |
| TTAGGTGACGTAGTATGTTA+TGG | - | tig0025883:1315-1334 | Msa1425630:intron | 35.0% | |
| ! | GTTAACTAGTTCTCACTCAT+TGG | - | tig0025883:1494-1513 | Msa1425630:CDS | 35.0% |
| ! | TCTACAGGAGGCAAAATTTT+AGG | - | tig0025883:1534-1553 | Msa1425630:CDS | 35.0% |
| !! | AGGCAAAATTTTAGGTGGTA+GGG | - | tig0025883:1542-1561 | Msa1425630:CDS | 35.0% |
| ! | CATACAATTTGTTCGCAACT+GGG | + | tig0025883:1676-1695 | None:intergenic | 35.0% |
| ! | TCATACAATTTGTTCGCAAC+TGG | + | tig0025883:1677-1696 | None:intergenic | 35.0% |
| GTATGAAGAAAAGATCCTCA+AGG | - | tig0025883:1691-1710 | Msa1425630:intron | 35.0% | |
| ACTGGTAAATGGAAATCGAT+GGG | + | tig0025883:1766-1785 | None:intergenic | 35.0% | |
| ATAAGACCTATAGTCATCCA+TGG | - | tig0025883:1802-1821 | Msa1425630:intron | 35.0% | |
| GTTTGAAGATGTTCAACTGT+TGG | - | tig0025883:1962-1981 | Msa1425630:intron | 35.0% | |
| ! | AATTAGCCTCAACTCTATTG+AGG | - | tig0025883:2049-2068 | Msa1425630:intron | 35.0% |
| TTTGCAGCAATAGTTCCTAT+AGG | + | tig0025883:2125-2144 | None:intergenic | 35.0% | |
| TATAGGAACTATTGCTGCAA+AGG | - | tig0025883:2124-2143 | Msa1425630:intron | 35.0% | |
| TATCATACTCTCCCTTCAAT+AGG | + | tig0025883:2223-2242 | None:intergenic | 35.0% | |
| GCACATAGAGTTAGATTAGT+GGG | + | tig0025883:2477-2496 | None:intergenic | 35.0% | |
| ATGTGCCTCTGTCTAAATAT+AGG | - | tig0025883:2491-2510 | Msa1425630:CDS | 35.0% | |
| GGACAACAAAAAAACTCAAG+AGG | + | tig0025883:2519-2538 | None:intergenic | 35.0% | |
| TCAACGCTACTGATATTATC+AGG | - | tig0025883:2576-2595 | Msa1425630:CDS | 35.0% | |
| ! | GGAATTAAGAAAGTTGATCG+TGG | + | tig0025883:2783-2802 | None:intergenic | 35.0% |
| AATTCCCGTGATTTACTCAA+CGG | - | tig0025883:2797-2816 | Msa1425630:CDS | 35.0% | |
| TATGAATAGAATAGTGTCCC+AGG | - | tig0025883:2880-2899 | Msa1425630:CDS | 35.0% | |
| !!! | TTTGATGCCTGCTAGTTTTA+AGG | - | tig0025883:3134-3153 | Msa1425630:five_prime_UTR | 35.0% |
| !! | GTTATTTTACCGGAATCAAC+AGG | + | tig0025883:3249-3268 | None:intergenic | 35.0% |
| GCATGCTAATGAATAAAGAC+AGG | + | tig0025883:3594-3613 | None:intergenic | 35.0% | |
| !! | CTCAGATTCTCACTGCTTTT+CGG | - | tig0025883:1145-1164 | Msa1425630:CDS | 40.0% |
| CTACATGACAGTATCGTGTT+CGG | - | tig0025883:1365-1384 | Msa1425630:intron | 40.0% | |
| GGTTGAGATGGTAACTAGAT+AGG | + | tig0025883:1429-1448 | None:intergenic | 40.0% | |
| ! | ACAGGAGGCAAAATTTTAGG+TGG | - | tig0025883:1537-1556 | Msa1425630:CDS | 40.0% |
| !! | GAGGCAAAATTTTAGGTGGT+AGG | - | tig0025883:1541-1560 | Msa1425630:CDS | 40.0% |
| !! | TTTGGAAGCACCTAAAGACA+TGG | + | tig0025883:1586-1605 | None:intergenic | 40.0% |
| ACTGGACAGAACCTGAAAAA+CGG | + | tig0025883:1610-1629 | None:intergenic | 40.0% | |
| GACAAAAGGCTCATTATACG+CGG | + | tig0025883:1646-1665 | None:intergenic | 40.0% | |
| !! | AACTGGGAAGTGTTGACAAA+AGG | + | tig0025883:1660-1679 | None:intergenic | 40.0% |
| AGAAAAGATCCTCAAGGCAT+AGG | - | tig0025883:1697-1716 | Msa1425630:intron | 40.0% | |
| CTGGTAAATGGAAATCGATG+GGG | + | tig0025883:1765-1784 | None:intergenic | 40.0% | |
| CACTGGTAAATGGAAATCGA+TGG | + | tig0025883:1767-1786 | None:intergenic | 40.0% | |
| CAGAAACTGACACTGGTAAA+TGG | + | tig0025883:1777-1796 | None:intergenic | 40.0% | |
| ATAGTCACAGAAACTGACAC+TGG | + | tig0025883:1784-1803 | None:intergenic | 40.0% | |
| CATTTACATGTCTGCAACCA+TGG | + | tig0025883:1822-1841 | None:intergenic | 40.0% | |
| GCAGACATGTAAATGCCAAA+AGG | - | tig0025883:1827-1846 | Msa1425630:intron | 40.0% | |
| CAAAAGGCTGAAAATGTGAG+CGG | - | tig0025883:1843-1862 | Msa1425630:intron | 40.0% | |
| ATAACTTCAGGAGACGGTAA+TGG | - | tig0025883:1867-1886 | Msa1425630:intron | 40.0% | |
| AGATGTTCAACTGTTGGAAC+AGG | - | tig0025883:1968-1987 | Msa1425630:intron | 40.0% | |
| ACTGTTGGAACAGGAAAAAG+AGG | - | tig0025883:1977-1996 | Msa1425630:intron | 40.0% | |
| CTTCTTCCTCAATAGAGTTG+AGG | + | tig0025883:2058-2077 | None:intergenic | 40.0% | |
| GGCACATAGAGTTAGATTAG+TGG | + | tig0025883:2478-2497 | None:intergenic | 40.0% | |
| AGGGTCCTATATTTAGACAG+AGG | + | tig0025883:2499-2518 | None:intergenic | 40.0% | |
| ATTCCCGTGATTTACTCAAC+GGG | - | tig0025883:2798-2817 | Msa1425630:CDS | 40.0% | |
| !! | ACAATGGATTGTCATAGTCC+AGG | - | tig0025883:3105-3124 | Msa1425630:exon | 40.0% |
| !!! | TGCCTGCTAGTTTTAAGGTT+CGG | - | tig0025883:3139-3158 | Msa1425630:intron | 40.0% |
| GAGCATATGGAAAATGCTCT+GGG | - | tig0025883:3390-3409 | Msa1425630:intron | 40.0% | |
| AGCATATGGAAAATGCTCTG+GGG | - | tig0025883:3391-3410 | Msa1425630:intron | 40.0% | |
| ! | TTGAAGCTTTGTCTTGCTGA+TGG | - | tig0025883:3464-3483 | Msa1425630:intron | 40.0% |
| GTTCTTGCATGATAGATCGA+AGG | - | tig0025883:3522-3541 | Msa1425630:five_prime_UTR | 40.0% | |
| TTGCATGATAGATCGAAGGA+TGG | - | tig0025883:3526-3545 | Msa1425630:five_prime_UTR | 40.0% | |
| TGCATGATAGATCGAAGGAT+GGG | - | tig0025883:3527-3546 | Msa1425630:five_prime_UTR | 40.0% | |
| GTAAACACCTGAATCTCCAA+AGG | + | tig0025883:3566-3585 | None:intergenic | 40.0% | |
| !! | TCACTGCTTTTCGGCTCAAA+AGG | - | tig0025883:1154-1173 | Msa1425630:CDS | 45.0% |
| CGATACTGTCATGTAGTCAC+CGG | + | tig0025883:1361-1380 | None:intergenic | 45.0% | |
| !!! | TGCTTCCAAAGCCGTTTTTC+AGG | - | tig0025883:1596-1615 | Msa1425630:intron | 45.0% |
| CAGAACCTGAAAAACGGCTT+TGG | + | tig0025883:1604-1623 | None:intergenic | 45.0% | |
| GCATGCTTCAAAGCCAGTTA+AGG | - | tig0025883:1739-1758 | Msa1425630:intron | 45.0% | |
| CTGCAACCATGGATGACTAT+AGG | + | tig0025883:1811-1830 | None:intergenic | 45.0% | |
| ! | CGCTCACATTTTCAGCCTTT+TGG | + | tig0025883:1845-1864 | None:intergenic | 45.0% |
| AATGTGAGCGGCATAACTTC+AGG | - | tig0025883:1855-1874 | Msa1425630:intron | 45.0% | |
| GGCAGTCCCATTTGTAACAT+TGG | + | tig0025883:2012-2031 | None:intergenic | 45.0% | |
| ACTCTATTGAGGAAGAAGCG+TGG | - | tig0025883:2060-2079 | Msa1425630:intron | 45.0% | |
| ! | CTCTATTGAGGAAGAAGCGT+GGG | - | tig0025883:2061-2080 | Msa1425630:intron | 45.0% |
| AATAGGAAAGCGACTCCAGA+TGG | + | tig0025883:2206-2225 | None:intergenic | 45.0% | |
| ! | TGGAGTCGCTTTCCTATTGA+AGG | - | tig0025883:2208-2227 | Msa1425630:intron | 45.0% |
| ! | GGAGTCGCTTTCCTATTGAA+GGG | - | tig0025883:2209-2228 | Msa1425630:intron | 45.0% |
| TCTTCATACACTTCAGCTGC+AGG | - | tig0025883:2259-2278 | Msa1425630:intron | 45.0% | |
| TTCCCGTGATTTACTCAACG+GGG | - | tig0025883:2799-2818 | Msa1425630:CDS | 45.0% | |
| !!! | GCTTTTTCAGCCTCCTCATA+GGG | + | tig0025883:2826-2845 | None:intergenic | 45.0% |
| !!! | AGCTTTTTCAGCCTCCTCAT+AGG | + | tig0025883:2827-2846 | None:intergenic | 45.0% |
| TAGAATAGTGTCCCAGGACA+AGG | - | tig0025883:2886-2905 | Msa1425630:CDS | 45.0% | |
| TCAGAGCTGGGAGAAAACAA+TGG | - | tig0025883:3089-3108 | Msa1425630:CDS | 45.0% | |
| GATTGTCATAGTCCAGGACA+AGG | - | tig0025883:3111-3130 | Msa1425630:five_prime_UTR | 45.0% | |
| GTCCGAACCTTAAAACTAGC+AGG | + | tig0025883:3144-3163 | None:intergenic | 45.0% | |
| TGATGACTCTGCAACAGAAG+AGG | - | tig0025883:3179-3198 | Msa1425630:intron | 45.0% | |
| ! | CTCTGCAACAGAAGAGGTTT+TGG | - | tig0025883:3185-3204 | Msa1425630:intron | 45.0% |
| !!! | GAGGTTTTGGATCCTGACTT+TGG | - | tig0025883:3198-3217 | Msa1425630:intron | 45.0% |
| ! | TTTGGATCCTGACTTTGGAG+AGG | - | tig0025883:3203-3222 | Msa1425630:intron | 45.0% |
| CGAGCATATGGAAAATGCTC+TGG | - | tig0025883:3389-3408 | Msa1425630:intron | 45.0% | |
| ! | CTCTGGGGATTTATCTGTTC+AGG | - | tig0025883:3406-3425 | Msa1425630:intron | 45.0% |
| !! | GAGAGAGTTGATGTGCAAAC+AGG | - | tig0025883:3428-3447 | Msa1425630:intron | 45.0% |
| !! | AATTTCAATTATTAAAATAT+TGG | + | tig0025883:1450-1469 | None:intergenic | 5.0% |
| !! | GGAAGCACCTAAAGACATGG+TGG | + | tig0025883:1583-1602 | None:intergenic | 50.0% |
| ! | GGCTCATTATACGCGGATTG+AGG | + | tig0025883:1639-1658 | None:intergenic | 50.0% |
| GAAATCGATGGGGCCTTAAC+TGG | + | tig0025883:1755-1774 | None:intergenic | 50.0% | |
| AGCGGCATAACTTCAGGAGA+CGG | - | tig0025883:1861-1880 | Msa1425630:intron | 50.0% | |
| !! | CAGGAGACGGTAATGGATCA+AGG | - | tig0025883:1874-1893 | Msa1425630:intron | 50.0% |
| GGGACTGCCACGAAAAATCT+TGG | - | tig0025883:2023-2042 | Msa1425630:intron | 50.0% | |
| ! | AAGAAGCGTGGGATCTACTG+AGG | - | tig0025883:2072-2091 | Msa1425630:intron | 50.0% |
| ! | AGAAGCGTGGGATCTACTGA+GGG | - | tig0025883:2073-2092 | Msa1425630:intron | 50.0% |
| GACCCCGTTGAGTAAATCAC+GGG | + | tig0025883:2804-2823 | None:intergenic | 50.0% | |
| GGACCCCGTTGAGTAAATCA+CGG | + | tig0025883:2805-2824 | None:intergenic | 50.0% | |
| TAAGGTTCGGACAGTTCCTC+TGG | - | tig0025883:3152-3171 | Msa1425630:intron | 50.0% | |
| CGGAATCAACAGGAGCAACA+CGG | + | tig0025883:3239-3258 | None:intergenic | 50.0% | |
| !! | CGTGTTGCTCCTGTTGATTC+CGG | - | tig0025883:3237-3256 | Msa1425630:intron | 50.0% |
| AACATGTGATCTCAGGGCTG+TGG | - | tig0025883:3351-3370 | Msa1425630:intron | 50.0% | |
| GATCGAAGGATGGGCATACA+CGG | - | tig0025883:3536-3555 | Msa1425630:five_prime_UTR | 50.0% | |
| ATCGAAGGATGGGCATACAC+GGG | - | tig0025883:3537-3556 | Msa1425630:five_prime_UTR | 50.0% | |
| ! | CGCGGATTGAGGAACAACAC+TGG | + | tig0025883:1628-1647 | None:intergenic | 55.0% |
| TACTCAACGGGGTCCCTATG+AGG | - | tig0025883:2810-2829 | Msa1425630:CDS | 55.0% | |
| GCAGGCATCAAACCTTGTCC+TGG | + | tig0025883:3126-3145 | None:intergenic | 55.0% | |
| GTTCGGACAGTTCCTCTGGA+AGG | - | tig0025883:3156-3175 | Msa1425630:intron | 55.0% | |
| GCAGAGTCATCACCTTCCAG+AGG | + | tig0025883:3171-3190 | None:intergenic | 55.0% | |
| ATGGCTGCCTCTCCAAAGTC+AGG | + | tig0025883:3213-3232 | None:intergenic | 55.0% | |
| ! | GACTTTGGAGAGGCAGCCAT+TGG | - | tig0025883:3213-3232 | Msa1425630:intron | 55.0% |
| AACAGGAGCAACACGGCCAA+TGG | + | tig0025883:3232-3251 | None:intergenic | 55.0% | |
| ATGTGATCTCAGGGCTGTGG+TGG | - | tig0025883:3354-3373 | Msa1425630:intron | 55.0% | |
| ! | CGGGCATCCTTTGGAGATTC+AGG | - | tig0025883:3556-3575 | Msa1425630:five_prime_UTR | 55.0% |
| TCAACGGGGTCCCTATGAGG+AGG | - | tig0025883:2813-2832 | Msa1425630:CDS | 60.0% | |
| GGGCATACACGGGCATCCTT+TGG | - | tig0025883:3547-3566 | Msa1425630:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025883 | gene | 983 | 3712 | 983 | ID=Msa1425630;Name=Msa1425630 |
| tig0025883 | mRNA | 983 | 3712 | 983 | ID=Msa1425630-mRNA-1;Parent=Msa1425630;Name=Msa1425630-mRNA-1;_AED=0.02;_eAED=0.02;_QI=237|1|0.75|1|0.66|0.5|4|0|402 |
| tig0025883 | exon | 983 | 1329 | 983 | ID=Msa1425630-mRNA-1:exon:4417;Parent=Msa1425630-mRNA-1 |
| tig0025883 | exon | 1437 | 1602 | 1437 | ID=Msa1425630-mRNA-1:exon:4416;Parent=Msa1425630-mRNA-1 |
| tig0025883 | exon | 2415 | 3154 | 2415 | ID=Msa1425630-mRNA-1:exon:4415;Parent=Msa1425630-mRNA-1 |
| tig0025883 | exon | 3520 | 3712 | 3520 | ID=Msa1425630-mRNA-1:exon:4414;Parent=Msa1425630-mRNA-1 |
| tig0025883 | five_prime_UTR | 3520 | 3712 | 3520 | ID=Msa1425630-mRNA-1:five_prime_utr;Parent=Msa1425630-mRNA-1 |
| tig0025883 | five_prime_UTR | 3111 | 3154 | 3111 | ID=Msa1425630-mRNA-1:five_prime_utr;Parent=Msa1425630-mRNA-1 |
| tig0025883 | CDS | 2415 | 3110 | 2415 | ID=Msa1425630-mRNA-1:cds;Parent=Msa1425630-mRNA-1 |
| tig0025883 | CDS | 1437 | 1602 | 1437 | ID=Msa1425630-mRNA-1:cds;Parent=Msa1425630-mRNA-1 |
| tig0025883 | CDS | 983 | 1329 | 983 | ID=Msa1425630-mRNA-1:cds;Parent=Msa1425630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
