AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0547030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0547030 MtrunA17_Chr4g0028851 99.612 258 1 0 1 258 1 258 0.0 531
Msa0547030 MtrunA17_Chr7g0275341 32.432 222 145 3 33 249 10 231 2.24e-30 113
Msa0547030 MtrunA17_Chr7g0247281 32.927 164 99 4 33 192 5 161 3.40e-17 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0547030 AT4G27490.4 73.152 257 67 2 1 256 1 256 6.44e-143 401
Msa0547030 AT4G27490.3 73.152 257 67 2 1 256 1 256 6.44e-143 401
Msa0547030 AT4G27490.1 73.152 257 67 2 1 256 1 256 6.44e-143 401
Msa0547030 AT4G27490.7 77.358 212 47 1 45 256 4 214 1.09e-123 351
Msa0547030 AT4G27490.2 71.123 187 53 1 1 186 1 187 1.06e-95 279
Msa0547030 AT4G27490.5 71.123 187 53 1 1 186 1 187 1.06e-95 279
Msa0547030 AT4G27490.6 71.123 187 53 1 1 186 1 187 1.06e-95 279
Msa0547030 AT3G61620.2 31.532 222 147 3 33 249 10 231 1.00e-28 109
Msa0547030 AT3G61620.1 31.532 222 147 3 33 249 10 231 1.00e-28 109
Msa0547030 AT3G46210.1 34.356 163 97 5 33 192 5 160 8.53e-17 77.8
Msa0547030 AT3G46210.5 34.356 163 97 5 33 192 5 160 8.53e-17 77.8
Msa0547030 AT3G46210.7 34.356 163 97 5 33 192 5 160 8.53e-17 77.8
Msa0547030 AT3G46210.3 34.356 163 97 5 33 192 5 160 8.53e-17 77.8
Msa0547030 AT3G46210.6 34.356 163 97 5 33 192 5 160 8.53e-17 77.8
Msa0547030 AT3G46210.4 34.356 163 97 5 33 192 5 160 8.53e-17 77.8
Msa0547030 AT3G46210.2 34.356 163 97 5 33 192 5 160 8.53e-17 77.8

Find 88 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATCGATAAAACATGAATT+TGG 0.247499 4_1:+39730710 Msa0547030:three_prime_UTR
TAATATGCTTGCTTAAACTT+TGG 0.248085 4_1:+39730745 Msa0547030:three_prime_UTR
GGCGGACCTCATTAATCTTT+GGG 0.282666 4_1:-39729964 None:intergenic
TTCTCTTCTACCTGAACTTT+GGG 0.285542 4_1:+39730498 Msa0547030:three_prime_UTR
CAAAATTTGCAGGACATAAA+AGG 0.290347 4_1:-39730561 None:intergenic
AGGCGGACCTCATTAATCTT+TGG 0.300741 4_1:-39729965 None:intergenic
TTTGGAGGGTGCAATAATAT+TGG 0.333785 4_1:+39727906 Msa0547030:CDS
GGATCTGCTTATGCTGAGTT+TGG 0.336443 4_1:+39727513 Msa0547030:CDS
ATTGCCTTCTTGCTCTCTCT+TGG 0.344667 4_1:-39727674 None:intergenic
TTTCTCTTCTACCTGAACTT+TGG 0.364381 4_1:+39730497 Msa0547030:three_prime_UTR
CTCTCTTCTTTCCAACCTTA+CGG 0.371999 4_1:+39726446 Msa0547030:five_prime_UTR
TTCAACTCCGGTTCGTGGAC+AGG 0.376488 4_1:+39727748 Msa0547030:CDS
TTCGATGCTTCATAAAGCTT+TGG 0.379648 4_1:+39727888 Msa0547030:CDS
GAAACCACGGCCATCGGGTC+GGG 0.381446 4_1:-39726594 None:intergenic
AAAACATCCACAGTGGTCTT+GGG 0.383967 4_1:-39727937 None:intergenic
GCTCATAAACCAAAATTTGC+AGG 0.401360 4_1:-39730571 None:intergenic
ATCACCCAACTGACAGTTAC+CGG 0.402501 4_1:+39729929 Msa0547030:CDS
AAAATTCTCTCCCAAAGTTC+AGG 0.411255 4_1:-39730508 None:intergenic
GCAATGATGTACAGTGATAC+AGG 0.416564 4_1:+39727692 Msa0547030:CDS
CGTCATTGATCCTATATTTG+AGG 0.429457 4_1:+39729850 Msa0547030:CDS
TTTGTTGGGAGGAGGGATGT+AGG 0.439261 4_1:+39730530 Msa0547030:three_prime_UTR
GGTGCTGTGAATGCTGCATC+AGG 0.440274 4_1:+39727492 Msa0547030:CDS
TTGTTGGGAGGAGGGATGTA+GGG 0.440500 4_1:+39730531 Msa0547030:three_prime_UTR
GCAGGGGATGCAGCTGTGCT+TGG 0.440538 4_1:+39730344 Msa0547030:intron
CTAGCAACCGATATGACAAC+TGG 0.441517 4_1:-39729255 None:intergenic
ATGAGCTTATCAAAGATAAA+CGG 0.441539 4_1:+39730588 Msa0547030:three_prime_UTR
GCATCGAACTGTACTCTTTG+TGG 0.445785 4_1:-39727873 None:intergenic
TGCTTCTCAAGGAAGAAGAT+TGG 0.451632 4_1:+39726570 Msa0547030:CDS
TACTCACCGTCTCTGACAAC+CGG 0.464034 4_1:+39726533 Msa0547030:CDS
CTTCTACTTCGCCGTAAGGT+TGG 0.465696 4_1:-39726457 None:intergenic
ATCGGTTGCTAGTCTTGCCT+TGG 0.469618 4_1:+39729266 Msa0547030:CDS
CACTCTTCTACTTCGCCGTA+AGG 0.481006 4_1:-39726461 None:intergenic
GATGCTTCATAAAGCTTTGG+AGG 0.481702 4_1:+39727891 Msa0547030:CDS
CAAAGCTTGCTAAGATTATG+AGG 0.489962 4_1:+39730376 Msa0547030:CDS
TGGACCCGACCCGATGGCCG+TGG 0.491907 4_1:+39726590 Msa0547030:CDS
CACAGCTCACATATGATGTT+CGG 0.492313 4_1:+39730661 Msa0547030:three_prime_UTR
TTGGGAATGGCCGGCAAAAG+TGG 0.492601 4_1:+39726494 Msa0547030:exon
TAATATACCTGTCCACGAAC+CGG 0.492612 4_1:-39727755 None:intergenic
TAATCATTAAGCTTCCATCT+TGG 0.496219 4_1:-39729883 None:intergenic
TTGCAAATGCTTGCCGCTCA+AGG 0.496812 4_1:+39730638 Msa0547030:three_prime_UTR
CTGGTGGAAACCACGGCCAT+CGG 0.497666 4_1:-39726600 None:intergenic
GGAAACCACGGCCATCGGGT+CGG 0.497786 4_1:-39726595 None:intergenic
TGGTGGAAACCACGGCCATC+GGG 0.498963 4_1:-39726599 None:intergenic
AATTAATTATTCATATAGCA+AGG 0.501992 4_1:+39730613 Msa0547030:three_prime_UTR
GTGGACACCGCCGTTGGGAA+TGG 0.502686 4_1:+39726481 Msa0547030:exon
TGATCTCCCAGTTGTCATAT+CGG 0.507012 4_1:+39729248 Msa0547030:CDS
TTCGCCGGTAACTGTCAGTT+GGG 0.515084 4_1:-39729933 None:intergenic
GAAGAGTGGACACCGCCGTT+GGG 0.515986 4_1:+39726476 Msa0547030:five_prime_UTR
GACCTCATTAATCTTTGGGG+TGG 0.519184 4_1:-39729960 None:intergenic
AAGGTCATACATCAGTATTC+CGG 0.520451 4_1:-39729295 None:intergenic
TCACACAGATACAATGACTT+TGG 0.523678 4_1:-39727541 None:intergenic
AGTCTTGCCTTGGCAGATGC+CGG 0.528894 4_1:+39729276 Msa0547030:CDS
CTTTGGGGTGGACCATTCGC+CGG 0.530416 4_1:-39729948 None:intergenic
TAATGATTCCAGTCATGTCT+CGG 0.532516 4_1:+39729818 Msa0547030:intron
GAGGAGGAAAACTGCCAAGA+TGG 0.537446 4_1:+39729869 Msa0547030:CDS
AGAATCTGCTTCTGATGCAC+AGG 0.537718 4_1:+39730410 Msa0547030:CDS
ATTAATTATTCATATAGCAA+GGG 0.540049 4_1:+39730614 Msa0547030:three_prime_UTR
ACACCGCCGTTGGGAATGGC+CGG 0.541283 4_1:+39726485 Msa0547030:exon
ATTCGCCGGTAACTGTCAGT+TGG 0.542035 4_1:-39729934 None:intergenic
TCTTCTTCCTTGAGAAGCAG+TGG 0.551293 4_1:-39726566 None:intergenic
CGGCAAAAGTGGAACGACTC+CGG 0.565948 4_1:+39726505 Msa0547030:CDS
AAAGAAACCACTGCTTCTCA+AGG 0.571189 4_1:+39726559 Msa0547030:CDS
GAAGATTGGACCCGACCCGA+TGG 0.573254 4_1:+39726584 Msa0547030:CDS
AAACATCCACAGTGGTCTTG+GGG 0.573612 4_1:-39727936 None:intergenic
GCTTACAAGCGGGTCTACAC+TGG 0.579283 4_1:-39726619 None:intergenic
ATGCTTCATAAAGCTTTGGA+GGG 0.579684 4_1:+39727892 Msa0547030:CDS
GTCTACACTGGTGGAAACCA+CGG 0.581502 4_1:-39726607 None:intergenic
CAGTATTCCGGCATCTGCCA+AGG 0.585424 4_1:-39729283 None:intergenic
TACAAGCGGGTCTACACTGG+TGG 0.590371 4_1:-39726616 None:intergenic
CCTTGTCGCCTCAGTTTCAG+TGG 0.591419 4_1:+39729314 Msa0547030:CDS
AATTCATACCACTGAAACTG+AGG 0.596309 4_1:-39729322 None:intergenic
CAATGATGTACAGTGATACA+GGG 0.609152 4_1:+39727693 Msa0547030:CDS
AACTGACAGTTACCGGCGAA+TGG 0.609296 4_1:+39729936 Msa0547030:CDS
CATTGATCCTATATTTGAGG+AGG 0.611322 4_1:+39729853 Msa0547030:CDS
CCACTGAAACTGAGGCGACA+AGG 0.615029 4_1:-39729314 None:intergenic
GCGGACCTCATTAATCTTTG+GGG 0.618854 4_1:-39729963 None:intergenic
AGAAGAGTGGACACCGCCGT+TGG 0.620560 4_1:+39726475 Msa0547030:five_prime_UTR
GTCCACCCCAAAGATTAATG+AGG 0.632706 4_1:+39729958 Msa0547030:CDS
TGGGTGATTTCATAGCGAGA+AGG 0.637919 4_1:-39729914 None:intergenic
AGAGACGGTGAGTATGTCGC+CGG 0.644092 4_1:-39726524 None:intergenic
TGGGCCAAGAGAGAGCAAGA+AGG 0.650542 4_1:+39727670 Msa0547030:CDS
GCATTGGTGCTGGAATCTAG+TGG 0.655397 4_1:+39727961 Msa0547030:CDS
TTGCCGGCCATTCCCAACGG+CGG 0.660243 4_1:-39726488 None:intergenic
CTTACGGCGAAGTAGAAGAG+TGG 0.664506 4_1:+39726462 Msa0547030:five_prime_UTR
CAAATATAGGATCAATGACG+AGG 0.670852 4_1:-39729847 None:intergenic
TTCTTTCCCCAAGACCACTG+TGG 0.680542 4_1:+39727930 Msa0547030:CDS
TAGCAACCGATATGACAACT+GGG 0.691620 4_1:-39729254 None:intergenic
TATGTGAGCTGTGCCTTGAG+CGG 0.693532 4_1:-39730651 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAATAAATTATTA+GGG - chr4_1:39726678-39726697 None:intergenic 0.0%
!! AAAATAAATAATAAATTATT+AGG - chr4_1:39726679-39726698 None:intergenic 0.0%
!! GTCAAAAAAAAAAAAAATTA+AGG - chr4_1:39729706-39729725 None:intergenic 10.0%
!! ATAAAACATATATAGATTAA+TGG + chr4_1:39730230-39730249 Msa0547030:intron 10.0%
!! TAAAACATATATAGATTAAT+GGG + chr4_1:39730231-39730250 Msa0547030:intron 10.0%
!!! CATTTTTTGCTTATATTTTA+GGG - chr4_1:39726831-39726850 None:intergenic 15.0%
!! CTAAAATATAAGCAAAAAAT+GGG + chr4_1:39726830-39726849 Msa0547030:intron 15.0%
!! AAAATAAACAAGATATGATA+AGG - chr4_1:39727809-39727828 None:intergenic 15.0%
!! TAATTAGCTAAATGAAAATA+TGG - chr4_1:39728219-39728238 None:intergenic 15.0%
!!! TTATTTTCTCCTAAATTTTA+GGG - chr4_1:39728813-39728832 None:intergenic 15.0%
!!! ATTATTTTCTCCTAAATTTT+AGG - chr4_1:39728814-39728833 None:intergenic 15.0%
!! TACCTTAATTTATATAGTAA+AGG - chr4_1:39728993-39729012 None:intergenic 15.0%
!! TTTACTATATAAATTAAGGT+AGG + chr4_1:39728992-39729011 Msa0547030:intron 15.0%
!! ATCATAAAGAAATATTTCTT+TGG + chr4_1:39729067-39729086 Msa0547030:intron 15.0%
!!! AATCTATATATGTTTTATTG+CGG - chr4_1:39730228-39730247 None:intergenic 15.0%
!! AATTAATTATTCATATAGCA+AGG + chr4_1:39730613-39730632 Msa0547030:three_prime_UTR 15.0%
!! ATTAATTATTCATATAGCAA+GGG + chr4_1:39730614-39730633 Msa0547030:three_prime_UTR 15.0%
!!! CCATTTTTTGCTTATATTTT+AGG - chr4_1:39726832-39726851 None:intergenic 20.0%
!! CCTAAAATATAAGCAAAAAA+TGG + chr4_1:39726829-39726848 Msa0547030:intron 20.0%
!! TCTTTAATTATTAAGCATGA+CGG - chr4_1:39727027-39727046 None:intergenic 20.0%
!!! TTTCATTAGTTTTTGTTTGT+TGG + chr4_1:39727623-39727642 Msa0547030:intron 20.0%
!!! AATTTTTTAGATTGTTTGAC+TGG + chr4_1:39728735-39728754 Msa0547030:intron 20.0%
!!! ATAATTTTGCAGATTTTTCT+GGG + chr4_1:39728965-39728984 Msa0547030:intron 20.0%
!! CACCTTTACTATATAAATTA+AGG + chr4_1:39728988-39729007 Msa0547030:intron 20.0%
!!! AAGGATCGTATTTAATATTT+TGG + chr4_1:39729125-39729144 Msa0547030:intron 20.0%
!!! ACTGTTTTTTATTTATTCTG+TGG + chr4_1:39729556-39729575 Msa0547030:intron 20.0%
!! AAAAATTAAGGAATAGTTCA+TGG - chr4_1:39729694-39729713 None:intergenic 20.0%
!! GTAAATTAAAAACGTGAAAT+AGG - chr4_1:39730030-39730049 None:intergenic 20.0%
!!! TAGCATGGTTTTTTAAATTA+TGG + chr4_1:39730165-39730184 Msa0547030:intron 20.0%
!! CAATTGGATTAATCAAATTA+AGG - chr4_1:39730273-39730292 None:intergenic 20.0%
!!! TTTGCTTATATTTTAGGGTT+TGG - chr4_1:39726826-39726845 None:intergenic 25.0%
!! ATTTTGCTTACATTATGAGA+CGG + chr4_1:39726912-39726931 Msa0547030:intron 25.0%
! AGACTAAAAATAAGTGTACA+AGG + chr4_1:39726974-39726993 Msa0547030:intron 25.0%
! CGACAATAGTTTGATAAAAA+AGG + chr4_1:39727057-39727076 Msa0547030:intron 25.0%
! GTTTGATAAAAAAGGATTTG+TGG + chr4_1:39727065-39727084 Msa0547030:intron 25.0%
! TTAACTATAACTACATGTGT+CGG - chr4_1:39727323-39727342 None:intergenic 25.0%
!! ATGTGTTCTTTTAATAGGTT+TGG + chr4_1:39727650-39727669 Msa0547030:intron 25.0%
!! TGTGTTCTTTTAATAGGTTT+GGG + chr4_1:39727651-39727670 Msa0547030:intron 25.0%
!!! CATAGTCATATTGTTTTTGA+TGG + chr4_1:39728023-39728042 Msa0547030:intron 25.0%
!!! TCATATTGTTTTTGATGGAT+AGG + chr4_1:39728028-39728047 Msa0547030:intron 25.0%
!! TGGATAGGTTAGAAATTTTA+AGG + chr4_1:39728043-39728062 Msa0547030:intron 25.0%
!!! TTGTTTACTGTGTTTTTATC+TGG + chr4_1:39728133-39728152 Msa0547030:intron 25.0%
! CATTTAGCTAATTAATCATG+AGG + chr4_1:39728225-39728244 Msa0547030:intron 25.0%
!! AAACACCATCATTTTATTCT+AGG - chr4_1:39728293-39728312 None:intergenic 25.0%
!! TTTAGTTGAAGTACTATCAT+AGG + chr4_1:39728399-39728418 Msa0547030:intron 25.0%
! TTAGTGTATTCTAAGTTGTA+AGG + chr4_1:39728500-39728519 Msa0547030:intron 25.0%
! TTTCGTTATCCCTAAAATTT+AGG + chr4_1:39728801-39728820 Msa0547030:intron 25.0%
!!! TAATAGTTGTTTTACACAAC+TGG + chr4_1:39728922-39728941 Msa0547030:intron 25.0%
!! CATAATTTTGCAGATTTTTC+TGG + chr4_1:39728964-39728983 Msa0547030:intron 25.0%
!!! GATCGTATTTAATATTTTGG+AGG + chr4_1:39729128-39729147 Msa0547030:intron 25.0%
! ATTTAAATCAATTGCAACTC+TGG - chr4_1:39729154-39729173 None:intergenic 25.0%
! TTTATTATTGAATTTGTCGC+AGG + chr4_1:39729225-39729244 Msa0547030:intron 25.0%
! GAAAGATCAACCAATAAAAA+TGG - chr4_1:39729619-39729638 None:intergenic 25.0%
!!! TTTTTATTGGTTGATCTTTC+TGG + chr4_1:39729619-39729638 Msa0547030:intron 25.0%
! TTTCTGGATTTATTAATGCT+AGG + chr4_1:39729635-39729654 Msa0547030:intron 25.0%
! ATTTAAAAAAGATGGAGAAC+AGG - chr4_1:39729988-39730007 None:intergenic 25.0%
!!! TCACGTTTTTAATTTACTTC+AGG + chr4_1:39730033-39730052 Msa0547030:intron 25.0%
!!! TATGTTTTAATGCTTGAAAC+AGG + chr4_1:39730136-39730155 Msa0547030:intron 25.0%
! GTGATTCTCTCTAAATATTA+AGG - chr4_1:39730203-39730222 None:intergenic 25.0%
!!! ATCTATATTTGTTGTGCAAT+TGG - chr4_1:39730289-39730308 None:intergenic 25.0%
! AATTGCACAACAAATATAGA+TGG + chr4_1:39730288-39730307 Msa0547030:intron 25.0%
! ATGAGCTTATCAAAGATAAA+CGG + chr4_1:39730588-39730607 Msa0547030:three_prime_UTR 25.0%
!! GTATCGATAAAACATGAATT+TGG + chr4_1:39730710-39730729 Msa0547030:three_prime_UTR 25.0%
! TAATATGCTTGCTTAAACTT+TGG + chr4_1:39730745-39730764 Msa0547030:three_prime_UTR 25.0%
TTAATGTGTACAAGAGTTCA+TGG + chr4_1:39726712-39726731 Msa0547030:intron 30.0%
CAAACTATTGTCGTACTTTA+GGG - chr4_1:39727050-39727069 None:intergenic 30.0%
TCAAACTATTGTCGTACTTT+AGG - chr4_1:39727051-39727070 None:intergenic 30.0%
CTACAAACACGAAATCATAA+AGG - chr4_1:39727461-39727480 None:intergenic 30.0%
! ATTTCGTGTTTGTAGTTTTC+AGG + chr4_1:39727466-39727485 Msa0547030:intron 30.0%
ACCTATTAAAAGAACACATC+AGG - chr4_1:39727649-39727668 None:intergenic 30.0%
ATCTTATATCTCGCAAAGTT+AGG + chr4_1:39727843-39727862 Msa0547030:intron 30.0%
TCTTATATCTCGCAAAGTTA+GGG + chr4_1:39727844-39727863 Msa0547030:intron 30.0%
ACTCACCTAGAATAAAATGA+TGG + chr4_1:39728285-39728304 Msa0547030:intron 30.0%
TCTTGAAATAAGCTTCACTA+AGG - chr4_1:39728331-39728350 None:intergenic 30.0%
AAGCTTATTTCAAGACTTGT+TGG + chr4_1:39728336-39728355 Msa0547030:intron 30.0%
! ACCAAGATTTCTGTTTTGTA+AGG + chr4_1:39728440-39728459 Msa0547030:intron 30.0%
TCCTTACAAAACAGAAATCT+TGG - chr4_1:39728444-39728463 None:intergenic 30.0%
! CTTTTCCTATAATAGACTTC+CGG - chr4_1:39728533-39728552 None:intergenic 30.0%
ATAGACTTCTTGCAACAAAA+AGG - chr4_1:39728679-39728698 None:intergenic 30.0%
TGTACTTGGCTATATCTTTA+AGG - chr4_1:39728881-39728900 None:intergenic 30.0%
AAGATATAGCCAAGTACATA+CGG + chr4_1:39728883-39728902 Msa0547030:intron 30.0%
TAATATATCCCGTATGTACT+TGG - chr4_1:39728895-39728914 None:intergenic 30.0%
TTGTCAAATTTAAGAAGCAG+TGG + chr4_1:39729100-39729119 Msa0547030:intron 30.0%
!! TAATTTGTGCCTTGGTTTTT+AGG + chr4_1:39729367-39729386 Msa0547030:intron 30.0%
!! AATTTGTGCCTTGGTTTTTA+GGG + chr4_1:39729368-39729387 Msa0547030:intron 30.0%
TCTGGTGCAAAGTAAAATAT+TGG - chr4_1:39729461-39729480 None:intergenic 30.0%
ACAGTTTAACAAGCATTTCA+AGG - chr4_1:39729541-39729560 None:intergenic 30.0%
!!! TTTGGCATTGCCATTTTTAT+TGG + chr4_1:39729606-39729625 Msa0547030:intron 30.0%
TAATCATTAAGCTTCCATCT+TGG - chr4_1:39729886-39729905 None:intergenic 30.0%
!!! TTTGGGAGAGAATTTTTTGT+TGG + chr4_1:39730515-39730534 Msa0547030:three_prime_UTR 30.0%
!!! TTGGGAGAGAATTTTTTGTT+GGG + chr4_1:39730516-39730535 Msa0547030:three_prime_UTR 30.0%
CAAAATTTGCAGGACATAAA+AGG - chr4_1:39730564-39730583 None:intergenic 30.0%
! CTTTTATGTCCTGCAAATTT+TGG + chr4_1:39730562-39730581 Msa0547030:three_prime_UTR 30.0%
! TTCGGTTAAGCAAAAGTTTT+AGG + chr4_1:39730679-39730698 Msa0547030:three_prime_UTR 30.0%
! AAGCAGTGGTTTCTTTTTAC+CGG - chr4_1:39726555-39726574 None:intergenic 35.0%
!! CGTTATTGTGTTTGCTATGA+GGG - chr4_1:39727106-39727125 None:intergenic 35.0%
CCTCATAGCAAACACAATAA+CGG + chr4_1:39727104-39727123 Msa0547030:intron 35.0%
TAGCAAACACAATAACGGTT+TGG + chr4_1:39727109-39727128 Msa0547030:intron 35.0%
AGCAAACACAATAACGGTTT+GGG + chr4_1:39727110-39727129 Msa0547030:intron 35.0%
ATGCCTTCAATTAGAAGAGT+TGG + chr4_1:39727214-39727233 Msa0547030:intron 35.0%
CACGGCTTTCAATATGAATT+GGG - chr4_1:39727286-39727305 None:intergenic 35.0%
ACACGGCTTTCAATATGAAT+TGG - chr4_1:39727287-39727306 None:intergenic 35.0%
TCACACAGATACAATGACTT+TGG - chr4_1:39727544-39727563 None:intergenic 35.0%
! CATGCTGATTGAAGTATGAA+GGG - chr4_1:39727594-39727613 None:intergenic 35.0%
! TCATGCTGATTGAAGTATGA+AGG - chr4_1:39727595-39727614 None:intergenic 35.0%
! GCCTGATGTGTTCTTTTAAT+AGG + chr4_1:39727645-39727664 Msa0547030:intron 35.0%
CAATGATGTACAGTGATACA+GGG + chr4_1:39727693-39727712 Msa0547030:CDS 35.0%
! CTATACAACGTTTTCAACTC+CGG + chr4_1:39727736-39727755 Msa0547030:CDS 35.0%
TTCGATGCTTCATAAAGCTT+TGG + chr4_1:39727888-39727907 Msa0547030:CDS 35.0%
!! ATGCTTCATAAAGCTTTGGA+GGG + chr4_1:39727892-39727911 Msa0547030:CDS 35.0%
! TTTGGAGGGTGCAATAATAT+TGG + chr4_1:39727906-39727925 Msa0547030:CDS 35.0%
TTTGCAACCTAAGCTACATA+CGG + chr4_1:39728258-39728277 Msa0547030:intron 35.0%
! TGATGGTGTTTGAATCTAAC+TGG + chr4_1:39728302-39728321 Msa0547030:intron 35.0%
!! TATTTCAAGACTTGTTGGTC+TGG + chr4_1:39728341-39728360 Msa0547030:intron 35.0%
!! ATTTCAAGACTTGTTGGTCT+GGG + chr4_1:39728342-39728361 Msa0547030:intron 35.0%
GTATTCTAAGTTGTAAGGTG+AGG + chr4_1:39728505-39728524 Msa0547030:intron 35.0%
CGGAAGTCTATTATAGGAAA+AGG + chr4_1:39728531-39728550 Msa0547030:intron 35.0%
GATCCCTAGTATAGAATATG+TGG + chr4_1:39728574-39728593 Msa0547030:intron 35.0%
CTGCCACATATTCTATACTA+GGG - chr4_1:39728580-39728599 None:intergenic 35.0%
ACTGCCACATATTCTATACT+AGG - chr4_1:39728581-39728600 None:intergenic 35.0%
AATTACTCCACGCTCTATAA+GGG - chr4_1:39728636-39728655 None:intergenic 35.0%
TAATTACTCCACGCTCTATA+AGG - chr4_1:39728637-39728656 None:intergenic 35.0%
TTGAACATCAGTGGTTGAAA+GGG - chr4_1:39728838-39728857 None:intergenic 35.0%
TTTGAACATCAGTGGTTGAA+AGG - chr4_1:39728839-39728858 None:intergenic 35.0%
TAGGATTCTTTGAACATCAG+TGG - chr4_1:39728847-39728866 None:intergenic 35.0%
GTTCAAAGAATCCTAACACT+AGG + chr4_1:39728852-39728871 Msa0547030:intron 35.0%
! CTTTAAGGAATCCTAGTGTT+AGG - chr4_1:39728866-39728885 None:intergenic 35.0%
AGATATAGCCAAGTACATAC+GGG + chr4_1:39728884-39728903 Msa0547030:intron 35.0%
GATAGAAGTCTAGTTGTTAG+TGG + chr4_1:39729029-39729048 Msa0547030:intron 35.0%
AATTTAAGAAGCAGTGGTGA+AGG + chr4_1:39729106-39729125 Msa0547030:intron 35.0%
AAGGTCATACATCAGTATTC+CGG - chr4_1:39729298-39729317 None:intergenic 35.0%
AATTCATACCACTGAAACTG+AGG - chr4_1:39729325-39729344 None:intergenic 35.0%
! ATTCTCTGTAATTTGTGCCT+TGG + chr4_1:39729359-39729378 Msa0547030:intron 35.0%
!! AAAAAGCACCCTAAAAACCA+AGG - chr4_1:39729379-39729398 None:intergenic 35.0%
TTAAGGAATAGTTCATGGCA+GGG - chr4_1:39729689-39729708 None:intergenic 35.0%
ATTAAGGAATAGTTCATGGC+AGG - chr4_1:39729690-39729709 None:intergenic 35.0%
TAATGATTCCAGTCATGTCT+CGG + chr4_1:39729818-39729837 Msa0547030:intron 35.0%
CAAATATAGGATCAATGACG+AGG - chr4_1:39729850-39729869 None:intergenic 35.0%
CGTCATTGATCCTATATTTG+AGG + chr4_1:39729850-39729869 Msa0547030:CDS 35.0%
CATTGATCCTATATTTGAGG+AGG + chr4_1:39729853-39729872 Msa0547030:CDS 35.0%
! CAGTTTTCCTCCTCAAATAT+AGG - chr4_1:39729863-39729882 None:intergenic 35.0%
TAAAAAAGATGGAGAACAGG+CGG - chr4_1:39729985-39730004 None:intergenic 35.0%
TACTGTCTCACTTTACAGAT+TGG + chr4_1:39730057-39730076 Msa0547030:intron 35.0%
!! CAAAGCTTGCTAAGATTATG+AGG + chr4_1:39730376-39730395 Msa0547030:CDS 35.0%
TTTCTCTTCTACCTGAACTT+TGG + chr4_1:39730497-39730516 Msa0547030:three_prime_UTR 35.0%
TTCTCTTCTACCTGAACTTT+GGG + chr4_1:39730498-39730517 Msa0547030:three_prime_UTR 35.0%
AAAATTCTCTCCCAAAGTTC+AGG - chr4_1:39730511-39730530 None:intergenic 35.0%
!!! AGAATTTTTTGTTGGGAGGA+GGG + chr4_1:39730523-39730542 Msa0547030:three_prime_UTR 35.0%
GCTCATAAACCAAAATTTGC+AGG - chr4_1:39730574-39730593 None:intergenic 35.0%
AGAGAGAGAGAGTAGTTTGA+TGG - chr4_1:39726432-39726451 None:intergenic 40.0%
CTCTCTTCTTTCCAACCTTA+CGG + chr4_1:39726446-39726465 Msa0547030:five_prime_UTR 40.0%
!! TTTTTACCGGTTGTCAGAGA+CGG - chr4_1:39726542-39726561 None:intergenic 40.0%
AAAGAAACCACTGCTTCTCA+AGG + chr4_1:39726559-39726578 Msa0547030:CDS 40.0%
TGCTTCTCAAGGAAGAAGAT+TGG + chr4_1:39726570-39726589 Msa0547030:CDS 40.0%
AGAGTGATGAAGCTTACAAG+CGG - chr4_1:39726633-39726652 None:intergenic 40.0%
TAAGACATGCTGTGTTGTCA+TGG + chr4_1:39726788-39726807 Msa0547030:intron 40.0%
TTGCTTACATTATGAGACGG+AGG + chr4_1:39726915-39726934 Msa0547030:intron 40.0%
TGCTTACATTATGAGACGGA+GGG + chr4_1:39726916-39726935 Msa0547030:intron 40.0%
!!! TGTTTGCTATGAGGGTTTTG+AGG - chr4_1:39727098-39727117 None:intergenic 40.0%
!! CCGTTATTGTGTTTGCTATG+AGG - chr4_1:39727107-39727126 None:intergenic 40.0%
GCAAACACAATAACGGTTTG+GGG + chr4_1:39727111-39727130 Msa0547030:intron 40.0%
! TGGATTCAGCACAAGACTTT+TGG - chr4_1:39727137-39727156 None:intergenic 40.0%
GCACCAACTCTTCTAATTGA+AGG - chr4_1:39727220-39727239 None:intergenic 40.0%
TCGGTATCAGATATTGGACA+CGG - chr4_1:39727304-39727323 None:intergenic 40.0%
! CATGTGTCGGTATCAGATAT+TGG - chr4_1:39727310-39727329 None:intergenic 40.0%
!! GTGTTTGTAGTTTTCAGGAC+TGG + chr4_1:39727471-39727490 Msa0547030:intron 40.0%
GCAATGATGTACAGTGATAC+AGG + chr4_1:39727692-39727711 Msa0547030:CDS 40.0%
TAATATACCTGTCCACGAAC+CGG - chr4_1:39727758-39727777 None:intergenic 40.0%
! GATGCTTCATAAAGCTTTGG+AGG + chr4_1:39727891-39727910 Msa0547030:CDS 40.0%
AAAACATCCACAGTGGTCTT+GGG - chr4_1:39727940-39727959 None:intergenic 40.0%
AAAAACATCCACAGTGGTCT+TGG - chr4_1:39727941-39727960 None:intergenic 40.0%
CAATGCAAAAACATCCACAG+TGG - chr4_1:39727947-39727966 None:intergenic 40.0%
!! CACTGTGGATGTTTTTGCAT+TGG + chr4_1:39727945-39727964 Msa0547030:CDS 40.0%
! TGAAGTACTATCATAGGCAC+TGG + chr4_1:39728405-39728424 Msa0547030:intron 40.0%
ATTATTCCCCTTATAGAGCG+TGG + chr4_1:39728626-39728645 Msa0547030:intron 40.0%
ATTACTCCACGCTCTATAAG+GGG - chr4_1:39728635-39728654 None:intergenic 40.0%
!! AGACTTCTAGCTTCTGTGTA+AGG + chr4_1:39728703-39728722 Msa0547030:intron 40.0%
TGAACATCAGTGGTTGAAAG+GGG - chr4_1:39728837-39728856 None:intergenic 40.0%
TGATCTCCCAGTTGTCATAT+CGG + chr4_1:39729248-39729267 Msa0547030:CDS 40.0%
TAGCAACCGATATGACAACT+GGG - chr4_1:39729257-39729276 None:intergenic 40.0%
ATGCATAGAGTGTGTGATTC+TGG - chr4_1:39729479-39729498 None:intergenic 40.0%
AACAAGCATTTCAAGGCTAC+AGG - chr4_1:39729534-39729553 None:intergenic 40.0%
ATGCTATCGTGCATAGAGTA+TGG - chr4_1:39729585-39729604 None:intergenic 40.0%
TCTATGCACGATAGCATGTT+TGG + chr4_1:39729588-39729607 Msa0547030:intron 40.0%
!! TGAAACAGGAGTATCTAGCA+TGG + chr4_1:39730150-39730169 Msa0547030:intron 40.0%
AGCAAGCTCTCATTGTCATT+TGG + chr4_1:39730311-39730330 Msa0547030:intron 40.0%
! TCATTTGGTTTCCTTCATGC+AGG + chr4_1:39730326-39730345 Msa0547030:intron 40.0%
! CATTTGGTTTCCTTCATGCA+GGG + chr4_1:39730327-39730346 Msa0547030:intron 40.0%
! ATTTGGTTTCCTTCATGCAG+GGG + chr4_1:39730328-39730347 Msa0547030:intron 40.0%
!!! GGAGAGAATTTTTTGTTGGG+AGG + chr4_1:39730519-39730538 Msa0547030:three_prime_UTR 40.0%
!!! GAGAATTTTTTGTTGGGAGG+AGG + chr4_1:39730522-39730541 Msa0547030:three_prime_UTR 40.0%
CACAGCTCACATATGATGTT+CGG + chr4_1:39730661-39730680 Msa0547030:three_prime_UTR 40.0%
TCTTCTTCCTTGAGAAGCAG+TGG - chr4_1:39726569-39726588 None:intergenic 45.0%
GAGTGATGAAGCTTACAAGC+GGG - chr4_1:39726632-39726651 None:intergenic 45.0%
! GGAGGGAGTATAGATGATAG+TGG + chr4_1:39726933-39726952 Msa0547030:intron 45.0%
! TGCCTTCAACATGAAGCGTT+GGG - chr4_1:39727261-39727280 None:intergenic 45.0%
ATGCCTTCAACATGAAGCGT+TGG - chr4_1:39727262-39727281 None:intergenic 45.0%
CACATGATATGACGCTGACA+TGG - chr4_1:39727386-39727405 None:intergenic 45.0%
GGATCTGCTTATGCTGAGTT+TGG + chr4_1:39727513-39727532 Msa0547030:CDS 45.0%
ATTGCCTTCTTGCTCTCTCT+TGG - chr4_1:39727677-39727696 None:intergenic 45.0%
GCATCGAACTGTACTCTTTG+TGG - chr4_1:39727876-39727895 None:intergenic 45.0%
! AAACATCCACAGTGGTCTTG+GGG - chr4_1:39727939-39727958 None:intergenic 45.0%
!! GGATGTTTTTGCATTGGTGC+TGG + chr4_1:39727951-39727970 Msa0547030:CDS 45.0%
ACCTCTTCGCATTAACGCAA+GGG - chr4_1:39728185-39728204 None:intergenic 45.0%
TACCTCTTCGCATTAACGCA+AGG - chr4_1:39728186-39728205 None:intergenic 45.0%
AGTGCATCCGTATGTAGCTT+AGG - chr4_1:39728268-39728287 None:intergenic 45.0%
TAAGTTGTAAGGTGAGGCAC+CGG + chr4_1:39728511-39728530 Msa0547030:intron 45.0%
!! AGGCACCGGAAGTCTATTAT+AGG + chr4_1:39728525-39728544 Msa0547030:intron 45.0%
CTAGCAACCGATATGACAAC+TGG - chr4_1:39729258-39729277 None:intergenic 45.0%
TGGGTGATTTCATAGCGAGA+AGG - chr4_1:39729917-39729936 None:intergenic 45.0%
ATCACCCAACTGACAGTTAC+CGG + chr4_1:39729929-39729948 Msa0547030:CDS 45.0%
GTCCACCCCAAAGATTAATG+AGG + chr4_1:39729958-39729977 Msa0547030:CDS 45.0%
! GACCTCATTAATCTTTGGGG+TGG - chr4_1:39729963-39729982 None:intergenic 45.0%
GCGGACCTCATTAATCTTTG+GGG - chr4_1:39729966-39729985 None:intergenic 45.0%
GGCGGACCTCATTAATCTTT+GGG - chr4_1:39729967-39729986 None:intergenic 45.0%
AGGCGGACCTCATTAATCTT+TGG - chr4_1:39729968-39729987 None:intergenic 45.0%
AGAATCTGCTTCTGATGCAC+AGG + chr4_1:39730410-39730429 Msa0547030:CDS 45.0%
!! ATAAAAATATTTAAAAAAGA+TGG - chr4_1:39729996-39730015 None:intergenic 5.0%
CTTCTACTTCGCCGTAAGGT+TGG - chr4_1:39726460-39726479 None:intergenic 50.0%
CACTCTTCTACTTCGCCGTA+AGG - chr4_1:39726464-39726483 None:intergenic 50.0%
CTTACGGCGAAGTAGAAGAG+TGG + chr4_1:39726462-39726481 Msa0547030:five_prime_UTR 50.0%
TACTCACCGTCTCTGACAAC+CGG + chr4_1:39726533-39726552 Msa0547030:CDS 50.0%
GTCTACACTGGTGGAAACCA+CGG - chr4_1:39726610-39726629 None:intergenic 50.0%
AGCAGAATAGCATTGCGCTG+CGG - chr4_1:39727164-39727183 None:intergenic 50.0%
ACCCCAACGCTTCATGTTGA+AGG + chr4_1:39727256-39727275 Msa0547030:intron 50.0%
!! GCCTTCAACATGAAGCGTTG+GGG - chr4_1:39727260-39727279 None:intergenic 50.0%
!! ACGTTTTCAACTCCGGTTCG+TGG + chr4_1:39727743-39727762 Msa0547030:CDS 50.0%
TTCTTTCCCCAAGACCACTG+TGG + chr4_1:39727930-39727949 Msa0547030:CDS 50.0%
!! GCATTGGTGCTGGAATCTAG+TGG + chr4_1:39727961-39727980 Msa0547030:CDS 50.0%
TCCCTTGCGTTAATGCGAAG+AGG + chr4_1:39728181-39728200 Msa0547030:intron 50.0%
TTGGTCTGGGTACAGCTTGT+AGG + chr4_1:39728355-39728374 Msa0547030:intron 50.0%
!! ATCGGTTGCTAGTCTTGCCT+TGG + chr4_1:39729266-39729285 Msa0547030:CDS 50.0%
GGTTCTTACCGAGACATGAC+TGG - chr4_1:39729829-39729848 None:intergenic 50.0%
GAGGAGGAAAACTGCCAAGA+TGG + chr4_1:39729869-39729888 Msa0547030:CDS 50.0%
TTCGCCGGTAACTGTCAGTT+GGG - chr4_1:39729936-39729955 None:intergenic 50.0%
ATTCGCCGGTAACTGTCAGT+TGG - chr4_1:39729937-39729956 None:intergenic 50.0%
AACTGACAGTTACCGGCGAA+TGG + chr4_1:39729936-39729955 Msa0547030:CDS 50.0%
TTTGTTGGGAGGAGGGATGT+AGG + chr4_1:39730530-39730549 Msa0547030:three_prime_UTR 50.0%
TTGTTGGGAGGAGGGATGTA+GGG + chr4_1:39730531-39730550 Msa0547030:three_prime_UTR 50.0%
TTGCAAATGCTTGCCGCTCA+AGG + chr4_1:39730638-39730657 Msa0547030:three_prime_UTR 50.0%
TATGTGAGCTGTGCCTTGAG+CGG - chr4_1:39730654-39730673 None:intergenic 50.0%
! CTTTTGCCGGCCATTCCCAA+CGG - chr4_1:39726494-39726513 None:intergenic 55.0%
TTGGGAATGGCCGGCAAAAG+TGG + chr4_1:39726494-39726513 Msa0547030:exon 55.0%
!! CGGAGTCGTTCCACTTTTGC+CGG - chr4_1:39726507-39726526 None:intergenic 55.0%
CGGCAAAAGTGGAACGACTC+CGG + chr4_1:39726505-39726524 Msa0547030:CDS 55.0%
AGAGACGGTGAGTATGTCGC+CGG - chr4_1:39726527-39726546 None:intergenic 55.0%
TACAAGCGGGTCTACACTGG+TGG - chr4_1:39726619-39726638 None:intergenic 55.0%
GCTTACAAGCGGGTCTACAC+TGG - chr4_1:39726622-39726641 None:intergenic 55.0%
! GGTGCTGTGAATGCTGCATC+AGG + chr4_1:39727492-39727511 Msa0547030:CDS 55.0%
TGGGCCAAGAGAGAGCAAGA+AGG + chr4_1:39727670-39727689 Msa0547030:CDS 55.0%
! TTCAACTCCGGTTCGTGGAC+AGG + chr4_1:39727748-39727767 Msa0547030:CDS 55.0%
AGTCTTGCCTTGGCAGATGC+CGG + chr4_1:39729276-39729295 Msa0547030:CDS 55.0%
CAGTATTCCGGCATCTGCCA+AGG - chr4_1:39729286-39729305 None:intergenic 55.0%
CCACTGAAACTGAGGCGACA+AGG - chr4_1:39729317-39729336 None:intergenic 55.0%
CCTTGTCGCCTCAGTTTCAG+TGG + chr4_1:39729314-39729333 Msa0547030:CDS 55.0%
AGAAGAGTGGACACCGCCGT+TGG + chr4_1:39726475-39726494 Msa0547030:five_prime_UTR 60.0%
GAAGAGTGGACACCGCCGTT+GGG + chr4_1:39726476-39726495 Msa0547030:five_prime_UTR 60.0%
GAAGATTGGACCCGACCCGA+TGG + chr4_1:39726584-39726603 Msa0547030:CDS 60.0%
TGGTGGAAACCACGGCCATC+GGG - chr4_1:39726602-39726621 None:intergenic 60.0%
CTGGTGGAAACCACGGCCAT+CGG - chr4_1:39726603-39726622 None:intergenic 60.0%
TAGCATTGCGCTGCGGCGAT+TGG - chr4_1:39727157-39727176 None:intergenic 60.0%
!! CTTTGGGGTGGACCATTCGC+CGG - chr4_1:39729951-39729970 None:intergenic 60.0%
CAGCTGCATCCCCTGCATGA+AGG - chr4_1:39730340-39730359 None:intergenic 60.0%
GTGGACACCGCCGTTGGGAA+TGG + chr4_1:39726481-39726500 Msa0547030:exon 65.0%
ACACCGCCGTTGGGAATGGC+CGG + chr4_1:39726485-39726504 Msa0547030:exon 65.0%
TTGCCGGCCATTCCCAACGG+CGG - chr4_1:39726491-39726510 None:intergenic 65.0%
GAAACCACGGCCATCGGGTC+GGG - chr4_1:39726597-39726616 None:intergenic 65.0%
GGAAACCACGGCCATCGGGT+CGG - chr4_1:39726598-39726617 None:intergenic 65.0%
GCAGGGGATGCAGCTGTGCT+TGG + chr4_1:39730344-39730363 Msa0547030:intron 65.0%
TGGACCCGACCCGATGGCCG+TGG + chr4_1:39726590-39726609 Msa0547030:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 39726414 39730801 39726414 ID=Msa0547030;Name=Msa0547030
chr4_1 mRNA 39726414 39730801 39726414 ID=Msa0547030-mRNA-1;Parent=Msa0547030;Name=Msa0547030-mRNA-1;_AED=0.18;_eAED=0.18;_QI=86|1|1|1|1|1|7|355|258
chr4_1 exon 39726414 39726635 39726414 ID=Msa0547030-mRNA-1:exon:10090;Parent=Msa0547030-mRNA-1
chr4_1 exon 39727481 39727559 39727481 ID=Msa0547030-mRNA-1:exon:10091;Parent=Msa0547030-mRNA-1
chr4_1 exon 39727667 39727769 39727667 ID=Msa0547030-mRNA-1:exon:10092;Parent=Msa0547030-mRNA-1
chr4_1 exon 39727865 39727985 39727865 ID=Msa0547030-mRNA-1:exon:10093;Parent=Msa0547030-mRNA-1
chr4_1 exon 39729247 39729335 39729247 ID=Msa0547030-mRNA-1:exon:10094;Parent=Msa0547030-mRNA-1
chr4_1 exon 39729830 39729979 39729830 ID=Msa0547030-mRNA-1:exon:10095;Parent=Msa0547030-mRNA-1
chr4_1 exon 39730348 39730801 39730348 ID=Msa0547030-mRNA-1:exon:10096;Parent=Msa0547030-mRNA-1
chr4_1 five_prime_UTR 39726414 39726499 39726414 ID=Msa0547030-mRNA-1:five_prime_utr;Parent=Msa0547030-mRNA-1
chr4_1 CDS 39726500 39726635 39726500 ID=Msa0547030-mRNA-1:cds;Parent=Msa0547030-mRNA-1
chr4_1 CDS 39727481 39727559 39727481 ID=Msa0547030-mRNA-1:cds;Parent=Msa0547030-mRNA-1
chr4_1 CDS 39727667 39727769 39727667 ID=Msa0547030-mRNA-1:cds;Parent=Msa0547030-mRNA-1
chr4_1 CDS 39727865 39727985 39727865 ID=Msa0547030-mRNA-1:cds;Parent=Msa0547030-mRNA-1
chr4_1 CDS 39729247 39729335 39729247 ID=Msa0547030-mRNA-1:cds;Parent=Msa0547030-mRNA-1
chr4_1 CDS 39729830 39729979 39729830 ID=Msa0547030-mRNA-1:cds;Parent=Msa0547030-mRNA-1
chr4_1 CDS 39730348 39730446 39730348 ID=Msa0547030-mRNA-1:cds;Parent=Msa0547030-mRNA-1
chr4_1 three_prime_UTR 39730447 39730801 39730447 ID=Msa0547030-mRNA-1:three_prime_utr;Parent=Msa0547030-mRNA-1
Gene Sequence

>Msa0547030

ATGGCCGGCAAAAGTGGAACGACTCCGGCGACATACTCACCGTCTCTGACAACCGGTAAAAAGAAACCACTGCTTCTCAAGGAAGAAGATTGGACCCGACCCGATGGCCGTGGTTTCCACCAGTGTAGACCCGCTTTTTTCAGGACTGGTGCTGTGAATGCTGCATCAGGATCTGCTTATGCTGAGTTTGGAAATACCAAAGTCATTGTATCTGTGTTTGGGCCAAGAGAGAGCAAGAAGGCAATGATGTACAGTGATACAGGGCGTCTGAATTGCAATGTCAGCTATACAACGTTTTCAACTCCGGTTCGTGGACAGGGTTCAGACCACAAAGAGTACAGTTCGATGCTTCATAAAGCTTTGGAGGGTGCAATAATATTGGATTCTTTCCCCAAGACCACTGTGGATGTTTTTGCATTGGTGCTGGAATCTAGTGGCAGTGATCTCCCAGTTGTCATATCGGTTGCTAGTCTTGCCTTGGCAGATGCCGGAATACTGATGTATGACCTTGTCGCCTCAGTTTCAGTGTCATGTCTCGGTAAGAACCTCGTCATTGATCCTATATTTGAGGAGGAAAACTGCCAAGATGGAAGCTTAATGATTACTTGCATGCCTTCTCGCTATGAAATCACCCAACTGACAGTTACCGGCGAATGGTCCACCCCAAAGATTAATGAGGGGATGCAGCTGTGCTTGGATGCTTGTGCAAAGCTTGCTAAGATTATGAGGTCATGTTTGAAAGAATCTGCTTCTGATGCACAGGATGAAAGCTCTTAG
Protein sequence

>Msa0547030

MAGKSGTTPATYSPSLTTGKKKPLLLKEEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLHKALEGAIILDSFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVASVSVSCLGKNLVIDPIFEEENCQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAKIMRSCLKESASDAQDESS*