Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404240 | XP_013458438.1 | 99.377 | 321 | 2 | 0 | 1 | 321 | 1 | 321 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404240 | sp|Q9SZQ5|VIP3_ARATH | 78.816 | 321 | 68 | 0 | 1 | 321 | 1 | 321 | 0.0 | 522 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404240 | A0A072URP5 | 99.377 | 321 | 2 | 0 | 1 | 321 | 1 | 321 | 0.0 | 644 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004790 | Msa1404240 | 0.811803 | 5.831321e-51 | -8.615850e-47 |
| Msa0029850 | Msa1404240 | -0.862589 | 4.552075e-64 | -8.615850e-47 |
| Msa0038020 | Msa1404240 | -0.803250 | 3.812703e-49 | -8.615850e-47 |
| Msa0042550 | Msa1404240 | -0.807797 | 4.241038e-50 | -8.615850e-47 |
| Msa0042980 | Msa1404240 | 0.856685 | 2.721762e-62 | -8.615850e-47 |
| Msa0076700 | Msa1404240 | -0.801430 | 9.036973e-49 | -8.615850e-47 |
| Msa0077180 | Msa1404240 | -0.854866 | 9.249199e-62 | -8.615850e-47 |
| Msa0085720 | Msa1404240 | -0.831225 | 1.883446e-55 | -8.615850e-47 |
| Msa0100240 | Msa1404240 | -0.825002 | 5.942537e-54 | -8.615850e-47 |
| Msa0102120 | Msa1404240 | -0.814547 | 1.457429e-51 | -8.615850e-47 |
| Msa0103490 | Msa1404240 | 0.850977 | 1.197416e-60 | -8.615850e-47 |
| Msa1348470 | Msa1404240 | 0.805851 | 1.093367e-49 | -8.615850e-47 |
| Msa1360240 | Msa1404240 | -0.802971 | 4.355800e-49 | -8.615850e-47 |
| Msa1364330 | Msa1404240 | 0.845994 | 2.869960e-59 | -8.615850e-47 |
| Msa1372150 | Msa1404240 | -0.812249 | 4.661669e-51 | -8.615850e-47 |
| Msa1373350 | Msa1404240 | -0.800657 | 1.300467e-48 | -8.615850e-47 |
| Msa1376160 | Msa1404240 | 0.847603 | 1.041603e-59 | -8.615850e-47 |
| Msa1390280 | Msa1404240 | 0.831016 | 2.119420e-55 | -8.615850e-47 |
| Msa1404240 | Msa1406110 | 0.825204 | 5.325515e-54 | -8.615850e-47 |
| Msa1404240 | Msa1407650 | -0.841473 | 4.650786e-58 | -8.615850e-47 |
| Msa1404240 | Msa1417810 | 0.859398 | 4.252071e-63 | -8.615850e-47 |
| Msa1404240 | Msa1437130 | -0.803343 | 3.646948e-49 | -8.615850e-47 |
| Msa1404240 | Msa1440940 | -0.805273 | 1.445609e-49 | -8.615850e-47 |
| Msa1404240 | Msa1444250 | 0.855131 | 7.749899e-62 | -8.615850e-47 |
| Msa1404240 | Msa1445400 | 0.859008 | 5.567638e-63 | -8.615850e-47 |
| Msa1404240 | Msa1449350 | 0.862741 | 4.089321e-64 | -8.615850e-47 |
| Msa1404240 | Msa1451620 | 0.836415 | 9.482182e-57 | -8.615850e-47 |
| Msa1404240 | Msa1459760 | 0.823185 | 1.587150e-53 | -8.615850e-47 |
| Msa1404240 | Msa1461810 | 0.815958 | 7.079369e-52 | -8.615850e-47 |
| Msa1404240 | Msa1461950 | 0.813827 | 2.101577e-51 | -8.615850e-47 |
| Msa0612680 | Msa1404240 | 0.824404 | 8.221595e-54 | -8.615850e-47 |
| Msa0615340 | Msa1404240 | -0.802917 | 4.468387e-49 | -8.615850e-47 |
| Msa0621750 | Msa1404240 | 0.836991 | 6.763538e-57 | -8.615850e-47 |
| Msa0622600 | Msa1404240 | -0.809521 | 1.816113e-50 | -8.615850e-47 |
| Msa0623380 | Msa1404240 | 0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0625840 | Msa1404240 | 0.830362 | 3.064248e-55 | -8.615850e-47 |
| Msa0626990 | Msa1404240 | -0.814438 | 1.540796e-51 | -8.615850e-47 |
| Msa0627350 | Msa1404240 | -0.805953 | 1.040814e-49 | -8.615850e-47 |
| Msa0642890 | Msa1404240 | 0.808522 | 2.971479e-50 | -8.615850e-47 |
| Msa0653320 | Msa1404240 | 0.806988 | 6.294550e-50 | -8.615850e-47 |
| Msa0678800 | Msa1404240 | 0.822265 | 2.597744e-53 | -8.615850e-47 |
| Msa0679550 | Msa1404240 | -0.801840 | 7.447295e-49 | -8.615850e-47 |
| Msa0744170 | Msa1404240 | 0.815903 | 7.283845e-52 | -8.615850e-47 |
| Msa0750950 | Msa1404240 | -0.818233 | 2.181672e-52 | -8.615850e-47 |
| Msa0751850 | Msa1404240 | -0.804530 | 2.067066e-49 | -8.615850e-47 |
| Msa0788070 | Msa1404240 | 0.823410 | 1.405918e-53 | -8.615850e-47 |
| Msa0801740 | Msa1404240 | -0.815788 | 7.725433e-52 | -8.615850e-47 |
| Msa0807030 | Msa1404240 | -0.817062 | 4.006364e-52 | -8.615850e-47 |
| Msa0818110 | Msa1404240 | -0.803614 | 3.204337e-49 | -8.615850e-47 |
| Msa0825240 | Msa1404240 | 0.812459 | 4.194313e-51 | -8.615850e-47 |
| Msa0831150 | Msa1404240 | -0.835501 | 1.617505e-56 | -8.615850e-47 |
| Msa0832970 | Msa1404240 | -0.805868 | 1.084605e-49 | -8.615850e-47 |
| Msa0124550 | Msa1404240 | -0.851269 | 9.903684e-61 | -8.615850e-47 |
| Msa0125050 | Msa1404240 | -0.834997 | 2.168101e-56 | -8.615850e-47 |
| Msa0125640 | Msa1404240 | 0.808510 | 2.989931e-50 | -8.615850e-47 |
| Msa0136890 | Msa1404240 | 0.810774 | 9.751038e-51 | -8.615850e-47 |
| Msa0137710 | Msa1404240 | 0.813884 | 2.042003e-51 | -8.615850e-47 |
| Msa0140510 | Msa1404240 | 0.869136 | 3.880956e-66 | -8.615850e-47 |
| Msa0169110 | Msa1404240 | -0.830755 | 2.455596e-55 | -8.615850e-47 |
| Msa0169820 | Msa1404240 | -0.861388 | 1.062635e-63 | -8.615850e-47 |
| Msa0175050 | Msa1404240 | -0.844121 | 9.197254e-59 | -8.615850e-47 |
| Msa0178510 | Msa1404240 | -0.804532 | 2.064583e-49 | -8.615850e-47 |
| Msa0178860 | Msa1404240 | 0.826390 | 2.784915e-54 | -8.615850e-47 |
| Msa0183010 | Msa1404240 | 0.876058 | 1.887674e-68 | -8.615850e-47 |
| Msa0199800 | Msa1404240 | 0.835954 | 1.241692e-56 | -8.615850e-47 |
| Msa0230640 | Msa1404240 | 0.882485 | 1.001366e-70 | -8.615850e-47 |
| Msa0236700 | Msa1404240 | 0.823632 | 1.247703e-53 | -8.615850e-47 |
| Msa1224580 | Msa1404240 | 0.816428 | 5.558985e-52 | -8.615850e-47 |
| Msa1225730 | Msa1404240 | 0.842208 | 2.975958e-58 | -8.615850e-47 |
| Msa1230830 | Msa1404240 | -0.803288 | 3.744642e-49 | -8.615850e-47 |
| Msa1235400 | Msa1404240 | -0.838898 | 2.187468e-57 | -8.615850e-47 |
| Msa1244720 | Msa1404240 | 0.836200 | 1.075640e-56 | -8.615850e-47 |
| Msa1244930 | Msa1404240 | -0.814475 | 1.511690e-51 | -8.615850e-47 |
| Msa1257800 | Msa1404240 | 0.837247 | 5.818498e-57 | -8.615850e-47 |
| Msa1258380 | Msa1404240 | 0.845918 | 3.008966e-59 | -8.615850e-47 |
| Msa1262990 | Msa1404240 | 0.816803 | 4.579674e-52 | -8.615850e-47 |
| Msa1264860 | Msa1404240 | 0.821760 | 3.401050e-53 | -8.615850e-47 |
| Msa1266200 | Msa1404240 | 0.800176 | 1.629655e-48 | -8.615850e-47 |
| Msa1270660 | Msa1404240 | -0.805714 | 1.168175e-49 | -8.615850e-47 |
| Msa1270730 | Msa1404240 | -0.803799 | 2.933860e-49 | -8.615850e-47 |
| Msa1276510 | Msa1404240 | -0.840557 | 8.095977e-58 | -8.615850e-47 |
| Msa1295540 | Msa1404240 | 0.804052 | 2.598754e-49 | -8.615850e-47 |
| Msa1307740 | Msa1404240 | -0.809194 | 2.134833e-50 | -8.615850e-47 |
| Msa1314770 | Msa1404240 | -0.841898 | 3.593887e-58 | -8.615850e-47 |
| Msa1316440 | Msa1404240 | -0.802890 | 4.526096e-49 | -8.615850e-47 |
| Msa1325860 | Msa1404240 | 0.811876 | 5.621647e-51 | -8.615850e-47 |
| Msa1335230 | Msa1404240 | -0.800959 | 1.128419e-48 | -8.615850e-47 |
| Msa1335710 | Msa1404240 | -0.838623 | 2.575865e-57 | -8.615850e-47 |
| Msa0381600 | Msa1404240 | 0.896680 | 2.922327e-76 | -8.615850e-47 |
| Msa0388030 | Msa1404240 | 0.849015 | 4.240251e-60 | -8.615850e-47 |
| Msa0388540 | Msa1404240 | 0.842790 | 2.085761e-58 | -8.615850e-47 |
| Msa0389610 | Msa1404240 | 0.857486 | 1.579542e-62 | -8.615850e-47 |
| Msa0389810 | Msa1404240 | -0.813430 | 2.569687e-51 | -8.615850e-47 |
| Msa0392040 | Msa1404240 | 0.834278 | 3.287284e-56 | -8.615850e-47 |
| Msa0394340 | Msa1404240 | -0.838899 | 2.185827e-57 | -8.615850e-47 |
| Msa0412840 | Msa1404240 | -0.807835 | 4.163610e-50 | -8.615850e-47 |
| Msa0427640 | Msa1404240 | 0.841904 | 3.580147e-58 | -8.615850e-47 |
| Msa0433410 | Msa1404240 | 0.831750 | 1.398126e-55 | -8.615850e-47 |
| Msa0457510 | Msa1404240 | -0.804256 | 2.356712e-49 | -8.615850e-47 |
| Msa0468130 | Msa1404240 | -0.809024 | 2.321636e-50 | -8.615850e-47 |
| Msa0469940 | Msa1404240 | 0.832238 | 1.059577e-55 | -8.615850e-47 |
| Msa0472960 | Msa1404240 | 0.853087 | 3.012862e-61 | -8.615850e-47 |
| Msa0477130 | Msa1404240 | 0.819275 | 1.264786e-52 | -8.615850e-47 |
| Msa0478450 | Msa1404240 | 0.817521 | 3.158527e-52 | -8.615850e-47 |
| Msa0482190 | Msa1404240 | 0.844220 | 8.650138e-59 | -8.615850e-47 |
| Msa0982270 | Msa1404240 | -0.808531 | 2.958694e-50 | -8.615850e-47 |
| Msa1006850 | Msa1404240 | -0.827079 | 1.906542e-54 | -8.615850e-47 |
| Msa1016910 | Msa1404240 | -0.801604 | 8.325271e-49 | -8.615850e-47 |
| Msa1026410 | Msa1404240 | -0.804597 | 2.001846e-49 | -8.615850e-47 |
| Msa1029060 | Msa1404240 | 0.847326 | 1.241188e-59 | -8.615850e-47 |
| Msa1029080 | Msa1404240 | 0.837559 | 4.839545e-57 | -8.615850e-47 |
| Msa1033410 | Msa1404240 | 0.822879 | 1.870613e-53 | -8.615850e-47 |
| Msa1041600 | Msa1404240 | 0.813818 | 2.110998e-51 | -8.615850e-47 |
| Msa1047720 | Msa1404240 | -0.802584 | 5.235343e-49 | -8.615850e-47 |
| Msa1058170 | Msa1404240 | -0.816031 | 6.818476e-52 | -8.615850e-47 |
| Msa1070840 | Msa1404240 | -0.800197 | 1.613393e-48 | -8.615850e-47 |
| Msa1073070 | Msa1404240 | 0.814925 | 1.201630e-51 | -8.615850e-47 |
| Msa1075080 | Msa1404240 | 0.837786 | 4.232813e-57 | -8.615850e-47 |
| Msa1075220 | Msa1404240 | 0.807202 | 5.670755e-50 | -8.615850e-47 |
| Msa1079730 | Msa1404240 | 0.826494 | 2.631117e-54 | -8.615850e-47 |
| Msa1080330 | Msa1404240 | 0.859096 | 5.239218e-63 | -8.615850e-47 |
| Msa1081790 | Msa1404240 | 0.813573 | 2.390865e-51 | -8.615850e-47 |
| Msa1102790 | Msa1404240 | -0.826859 | 2.152964e-54 | -8.615850e-47 |
| Msa0266240 | Msa1404240 | -0.812659 | 3.793978e-51 | -8.615850e-47 |
| Msa0279210 | Msa1404240 | 0.829941 | 3.884236e-55 | -8.615850e-47 |
| Msa0279250 | Msa1404240 | 0.816059 | 6.722022e-52 | -8.615850e-47 |
| Msa0292170 | Msa1404240 | -0.817013 | 4.108558e-52 | -8.615850e-47 |
| Msa0306210 | Msa1404240 | 0.841428 | 4.780433e-58 | -8.615850e-47 |
| Msa0318970 | Msa1404240 | 0.824561 | 7.549304e-54 | -8.615850e-47 |
| Msa0330390 | Msa1404240 | -0.815778 | 7.763836e-52 | -8.615850e-47 |
| Msa0338730 | Msa1404240 | 0.802662 | 5.044138e-49 | -8.615850e-47 |
| Msa0344690 | Msa1404240 | 0.818408 | 1.991351e-52 | -8.615850e-47 |
| Msa0347610 | Msa1404240 | -0.816471 | 5.437629e-52 | -8.615850e-47 |
| Msa0350320 | Msa1404240 | 0.810192 | 1.302297e-50 | -8.615850e-47 |
| Msa1118760 | Msa1404240 | -0.802222 | 6.213832e-49 | -8.615850e-47 |
| Msa1124540 | Msa1404240 | 0.858379 | 8.577859e-63 | -8.615850e-47 |
| Msa1132390 | Msa1404240 | -0.819207 | 1.310705e-52 | -8.615850e-47 |
| Msa1139000 | Msa1404240 | 0.806324 | 8.691776e-50 | -8.615850e-47 |
| Msa1144720 | Msa1404240 | 0.831458 | 1.650240e-55 | -8.615850e-47 |
| Msa1156150 | Msa1404240 | 0.860063 | 2.681564e-63 | -8.615850e-47 |
| Msa1156170 | Msa1404240 | 0.839685 | 1.366781e-57 | -8.615850e-47 |
| Msa1163590 | Msa1404240 | 0.848000 | 8.098908e-60 | -8.615850e-47 |
| Msa1166500 | Msa1404240 | 0.808264 | 3.373229e-50 | -8.615850e-47 |
| Msa1168040 | Msa1404240 | 0.837198 | 5.989314e-57 | -8.615850e-47 |
| Msa1171730 | Msa1404240 | -0.813167 | 2.935294e-51 | -8.615850e-47 |
| Msa1174310 | Msa1404240 | -0.834301 | 3.244522e-56 | -8.615850e-47 |
| Msa1177780 | Msa1404240 | -0.814452 | 1.529858e-51 | -8.615850e-47 |
| Msa1183100 | Msa1404240 | 0.816806 | 4.574326e-52 | -8.615850e-47 |
| Msa1191050 | Msa1404240 | 0.844069 | 9.496912e-59 | -8.615850e-47 |
| Msa1202770 | Msa1404240 | 0.825608 | 4.272273e-54 | -8.615850e-47 |
| Msa1207470 | Msa1404240 | 0.807859 | 4.115116e-50 | -8.615850e-47 |
| Msa1208650 | Msa1404240 | 0.831854 | 1.318453e-55 | -8.615850e-47 |
| Msa1222280 | Msa1404240 | -0.821740 | 3.437751e-53 | -8.615850e-47 |
| Msa0485490 | Msa1404240 | -0.815532 | 8.808095e-52 | -8.615850e-47 |
| Msa0485500 | Msa1404240 | 0.841490 | 4.604829e-58 | -8.615850e-47 |
| Msa0489610 | Msa1404240 | -0.818147 | 2.281219e-52 | -8.615850e-47 |
| Msa0521620 | Msa1404240 | -0.804749 | 1.860469e-49 | -8.615850e-47 |
| Msa0526670 | Msa1404240 | 0.850263 | 1.901099e-60 | -8.615850e-47 |
| Msa0526740 | Msa1404240 | 0.830540 | 2.772646e-55 | -8.615850e-47 |
| Msa0527980 | Msa1404240 | 0.804110 | 2.527633e-49 | -8.615850e-47 |
| Msa0528610 | Msa1404240 | 0.849491 | 3.125203e-60 | -8.615850e-47 |
| Msa0530650 | Msa1404240 | -0.813582 | 2.380043e-51 | -8.615850e-47 |
| Msa0532810 | Msa1404240 | 0.850817 | 1.328323e-60 | -8.615850e-47 |
| Msa0547030 | Msa1404240 | 0.811364 | 7.266334e-51 | -8.615850e-47 |
| Msa0557950 | Msa1404240 | 0.808925 | 2.436899e-50 | -8.615850e-47 |
| Msa0587190 | Msa1404240 | -0.809439 | 1.891501e-50 | -8.615850e-47 |
| Msa0845070 | Msa1404240 | -0.808127 | 3.608232e-50 | -8.615850e-47 |
| Msa0864470 | Msa1404240 | 0.857369 | 1.710399e-62 | -8.615850e-47 |
| Msa0866010 | Msa1404240 | 0.802012 | 6.864655e-49 | -8.615850e-47 |
| Msa0876360 | Msa1404240 | -0.807193 | 5.697933e-50 | -8.615850e-47 |
| Msa0876850 | Msa1404240 | 0.848597 | 5.538632e-60 | -8.615850e-47 |
| Msa0881160 | Msa1404240 | -0.807986 | 3.866550e-50 | -8.615850e-47 |
| Msa0881210 | Msa1404240 | 0.844868 | 5.791670e-59 | -8.615850e-47 |
| Msa0925870 | Msa1404240 | -0.815697 | 8.093479e-52 | -8.615850e-47 |
| Msa0942080 | Msa1404240 | 0.814718 | 1.336080e-51 | -8.615850e-47 |
| Msa0942550 | Msa1404240 | 0.834457 | 2.964513e-56 | -8.615850e-47 |
| Msa0942560 | Msa1404240 | 0.816483 | 5.402437e-52 | -8.615850e-47 |
| Msa0946280 | Msa1404240 | 0.860406 | 2.112735e-63 | -8.615850e-47 |
| Msa0946690 | Msa1404240 | 0.850781 | 1.359909e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404240 | MtrunA17_Chr4g0070791 | 99.377 | 321 | 2 | 0 | 1 | 321 | 1 | 321 | 0.0 | 644 |
| Msa1404240 | MtrunA17_Chr5g0405851 | 29.237 | 236 | 152 | 3 | 35 | 270 | 229 | 449 | 5.83e-24 | 101 |
| Msa1404240 | MtrunA17_Chr5g0405851 | 32.593 | 135 | 90 | 1 | 164 | 298 | 259 | 392 | 2.36e-14 | 73.6 |
| Msa1404240 | MtrunA17_Chr5g0405851 | 25.217 | 230 | 150 | 5 | 90 | 318 | 241 | 449 | 6.90e-13 | 68.9 |
| Msa1404240 | MtrunA17_Chr1g0172501 | 30.252 | 238 | 151 | 3 | 33 | 270 | 330 | 552 | 2.34e-23 | 100 |
| Msa1404240 | MtrunA17_Chr1g0172501 | 31.469 | 143 | 97 | 1 | 156 | 298 | 354 | 495 | 1.80e-12 | 67.8 |
| Msa1404240 | MtrunA17_Chr1g0172501 | 29.577 | 142 | 99 | 1 | 156 | 297 | 270 | 410 | 3.29e-12 | 67.0 |
| Msa1404240 | MtrunA17_Chr3g0093681 | 29.832 | 238 | 152 | 3 | 33 | 270 | 330 | 552 | 1.64e-22 | 97.8 |
| Msa1404240 | MtrunA17_Chr3g0093681 | 31.469 | 143 | 97 | 1 | 156 | 298 | 354 | 495 | 2.03e-12 | 67.8 |
| Msa1404240 | MtrunA17_Chr3g0093681 | 29.577 | 142 | 99 | 1 | 156 | 297 | 270 | 410 | 3.06e-12 | 67.4 |
| Msa1404240 | MtrunA17_Chr1g0185501 | 25.468 | 267 | 182 | 3 | 32 | 295 | 41 | 293 | 1.40e-21 | 93.2 |
| Msa1404240 | MtrunA17_Chr1g0185501 | 34.307 | 137 | 89 | 1 | 161 | 297 | 30 | 165 | 3.38e-17 | 80.9 |
| Msa1404240 | MtrunA17_Chr6g0448921 | 25.681 | 257 | 171 | 5 | 41 | 297 | 3 | 239 | 1.85e-21 | 95.1 |
| Msa1404240 | MtrunA17_Chr6g0448921 | 29.032 | 186 | 117 | 3 | 32 | 217 | 73 | 243 | 2.98e-14 | 73.6 |
| Msa1404240 | MtrunA17_Chr6g0448921 | 24.348 | 230 | 159 | 3 | 32 | 261 | 31 | 245 | 3.70e-13 | 70.1 |
| Msa1404240 | MtrunA17_Chr4g0067151 | 26.446 | 242 | 161 | 5 | 33 | 270 | 93 | 321 | 4.57e-20 | 89.0 |
| Msa1404240 | MtrunA17_Chr4g0067151 | 25.667 | 300 | 191 | 10 | 32 | 318 | 41 | 321 | 1.18e-19 | 87.8 |
| Msa1404240 | MtrunA17_Chr4g0067151 | 32.237 | 152 | 93 | 2 | 155 | 297 | 24 | 174 | 7.62e-19 | 85.5 |
| Msa1404240 | MtrunA17_Chr2g0281451 | 25.490 | 255 | 170 | 5 | 43 | 297 | 4 | 238 | 4.44e-19 | 88.2 |
| Msa1404240 | MtrunA17_Chr2g0281451 | 24.893 | 233 | 160 | 3 | 32 | 264 | 30 | 247 | 3.62e-15 | 76.6 |
| Msa1404240 | MtrunA17_Chr2g0281451 | 28.125 | 192 | 123 | 3 | 32 | 223 | 72 | 248 | 4.27e-15 | 76.3 |
| Msa1404240 | MtrunA17_Chr2g0281451 | 25.000 | 220 | 145 | 4 | 100 | 319 | 13 | 212 | 2.11e-12 | 68.2 |
| Msa1404240 | MtrunA17_Chr3g0136971 | 29.412 | 221 | 141 | 4 | 58 | 278 | 417 | 622 | 6.08e-19 | 87.4 |
| Msa1404240 | MtrunA17_Chr3g0136971 | 26.977 | 215 | 136 | 4 | 105 | 319 | 422 | 615 | 2.95e-13 | 70.5 |
| Msa1404240 | MtrunA17_Chr1g0176241 | 29.583 | 240 | 143 | 7 | 92 | 321 | 109 | 332 | 2.68e-18 | 85.1 |
| Msa1404240 | MtrunA17_Chr5g0401661 | 25.418 | 299 | 188 | 8 | 32 | 320 | 410 | 683 | 1.15e-17 | 83.6 |
| Msa1404240 | MtrunA17_Chr5g0401661 | 25.559 | 313 | 190 | 8 | 29 | 319 | 308 | 599 | 6.07e-17 | 81.6 |
| Msa1404240 | MtrunA17_Chr5g0401671 | 23.926 | 326 | 189 | 10 | 8 | 280 | 241 | 560 | 2.38e-17 | 82.8 |
| Msa1404240 | MtrunA17_Chr5g0401671 | 24.759 | 311 | 193 | 8 | 29 | 319 | 220 | 509 | 1.06e-16 | 80.9 |
| Msa1404240 | MtrunA17_Chr1g0200901 | 24.407 | 295 | 198 | 8 | 12 | 300 | 78 | 353 | 3.87e-17 | 81.6 |
| Msa1404240 | MtrunA17_Chr1g0200901 | 27.919 | 197 | 127 | 3 | 95 | 291 | 73 | 254 | 1.00e-12 | 68.2 |
| Msa1404240 | MtrunA17_Chr3g0103361 | 24.254 | 268 | 177 | 6 | 54 | 317 | 13 | 258 | 2.67e-16 | 78.2 |
| Msa1404240 | MtrunA17_Chr2g0295791 | 30.909 | 165 | 107 | 2 | 155 | 319 | 167 | 324 | 5.11e-16 | 78.6 |
| Msa1404240 | MtrunA17_Chr2g0295791 | 24.658 | 292 | 190 | 8 | 35 | 318 | 187 | 456 | 1.12e-12 | 68.6 |
| Msa1404240 | MtrunA17_Chr2g0295791 | 26.738 | 187 | 118 | 6 | 111 | 295 | 179 | 348 | 6.54e-12 | 66.2 |
| Msa1404240 | MtrunA17_Chr4g0053651 | 24.771 | 327 | 187 | 10 | 9 | 282 | 225 | 545 | 2.38e-15 | 76.6 |
| Msa1404240 | MtrunA17_Chr4g0053651 | 23.473 | 311 | 197 | 8 | 29 | 319 | 203 | 492 | 1.67e-12 | 68.2 |
| Msa1404240 | MtrunA17_Chr2g0331961 | 23.387 | 248 | 167 | 7 | 81 | 320 | 80 | 312 | 7.36e-15 | 73.9 |
| Msa1404240 | MtrunA17_Chr4g0059031 | 27.519 | 258 | 160 | 9 | 72 | 318 | 31 | 272 | 4.69e-14 | 73.2 |
| Msa1404240 | MtrunA17_Chr4g0059031 | 34.247 | 146 | 90 | 3 | 167 | 312 | 28 | 167 | 4.08e-13 | 70.1 |
| Msa1404240 | MtrunA17_Chr8g0390861 | 28.980 | 245 | 148 | 7 | 73 | 310 | 839 | 1064 | 5.14e-14 | 73.2 |
| Msa1404240 | MtrunA17_Chr1g0196201 | 32.624 | 141 | 92 | 2 | 161 | 298 | 88 | 228 | 9.34e-14 | 71.6 |
| Msa1404240 | MtrunA17_Chr7g0253861 | 23.197 | 319 | 203 | 8 | 12 | 317 | 53 | 342 | 1.34e-13 | 70.5 |
| Msa1404240 | MtrunA17_Chr7g0253861 | 24.638 | 207 | 134 | 4 | 95 | 297 | 48 | 236 | 1.91e-13 | 70.1 |
| Msa1404240 | MtrunA17_Chr8g0352821 | 22.945 | 292 | 206 | 4 | 6 | 296 | 217 | 490 | 1.36e-13 | 71.6 |
| Msa1404240 | MtrunA17_Chr2g0317491 | 27.232 | 224 | 137 | 8 | 105 | 321 | 568 | 772 | 4.88e-13 | 70.1 |
| Msa1404240 | MtrunA17_Chr4g0058091 | 25.188 | 266 | 168 | 8 | 33 | 288 | 245 | 489 | 5.80e-13 | 69.3 |
| Msa1404240 | MtrunA17_Chr8g0392701 | 29.348 | 184 | 120 | 5 | 11 | 189 | 146 | 324 | 6.20e-13 | 68.6 |
| Msa1404240 | MtrunA17_Chr8g0392701 | 31.973 | 147 | 95 | 3 | 155 | 297 | 60 | 205 | 1.67e-12 | 67.4 |
| Msa1404240 | MtrunA17_Chr8g0392701 | 25.385 | 260 | 157 | 7 | 34 | 272 | 79 | 322 | 1.33e-11 | 64.7 |
| Msa1404240 | MtrunA17_Chr2g0284241 | 26.014 | 296 | 172 | 9 | 32 | 284 | 22 | 313 | 9.82e-13 | 67.8 |
| Msa1404240 | MtrunA17_Chr4g0035611 | 25.843 | 267 | 166 | 7 | 31 | 295 | 64 | 300 | 1.48e-12 | 68.6 |
| Msa1404240 | MtrunA17_Chr3g0099061 | 30.159 | 189 | 112 | 5 | 109 | 296 | 221 | 390 | 1.75e-12 | 67.8 |
| Msa1404240 | MtrunA17_Chr1g0155601 | 27.778 | 324 | 192 | 15 | 12 | 318 | 61 | 359 | 4.65e-12 | 66.6 |
| Msa1404240 | MtrunA17_Chr3g0138311 | 27.869 | 244 | 149 | 11 | 31 | 270 | 676 | 896 | 8.14e-12 | 66.2 |
| Msa1404240 | MtrunA17_Chr2g0307941 | 24.904 | 261 | 180 | 7 | 13 | 271 | 61 | 307 | 1.22e-11 | 65.9 |
| Msa1404240 | MtrunA17_Chr8g0392731 | 27.854 | 219 | 133 | 8 | 109 | 321 | 66 | 265 | 2.46e-11 | 64.7 |
| Msa1404240 | MtrunA17_Chr3g0095501 | 23.588 | 301 | 187 | 10 | 8 | 272 | 264 | 557 | 3.17e-11 | 64.3 |
| Msa1404240 | MtrunA17_Chr3g0144511 | 23.492 | 315 | 179 | 11 | 11 | 270 | 62 | 369 | 4.28e-11 | 63.2 |
| Msa1404240 | MtrunA17_Chr4g0069701 | 23.636 | 275 | 184 | 7 | 56 | 319 | 435 | 694 | 5.46e-11 | 63.5 |
| Msa1404240 | MtrunA17_Chr2g0331981 | 23.596 | 267 | 185 | 6 | 31 | 293 | 28 | 279 | 5.78e-11 | 63.5 |
| Msa1404240 | MtrunA17_Chr4g0004241 | 25.346 | 217 | 143 | 6 | 81 | 293 | 78 | 279 | 5.80e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404240 | AT4G29830.1 | 78.816 | 321 | 68 | 0 | 1 | 321 | 1 | 321 | 0.0 | 522 |
| Msa1404240 | AT2G41500.1 | 31.933 | 238 | 147 | 3 | 33 | 270 | 313 | 535 | 1.29e-28 | 115 |
| Msa1404240 | AT2G41500.1 | 26.754 | 228 | 150 | 4 | 72 | 298 | 267 | 478 | 5.13e-13 | 70.1 |
| Msa1404240 | AT2G41500.2 | 31.933 | 238 | 147 | 3 | 33 | 270 | 313 | 535 | 1.29e-28 | 115 |
| Msa1404240 | AT2G41500.2 | 26.754 | 228 | 150 | 4 | 72 | 298 | 267 | 478 | 5.13e-13 | 70.1 |
| Msa1404240 | AT3G49660.1 | 28.631 | 241 | 157 | 4 | 32 | 270 | 85 | 312 | 3.46e-25 | 103 |
| Msa1404240 | AT3G49660.1 | 24.662 | 296 | 193 | 10 | 32 | 318 | 38 | 312 | 8.60e-19 | 85.9 |
| Msa1404240 | AT3G49660.1 | 33.099 | 142 | 89 | 2 | 161 | 297 | 27 | 167 | 9.03e-19 | 85.5 |
| Msa1404240 | AT5G52820.1 | 27.347 | 245 | 145 | 5 | 32 | 270 | 254 | 471 | 3.80e-19 | 88.2 |
| Msa1404240 | AT5G52820.1 | 30.808 | 198 | 117 | 6 | 92 | 284 | 99 | 281 | 1.18e-16 | 80.9 |
| Msa1404240 | AT5G52820.1 | 29.825 | 171 | 106 | 5 | 155 | 319 | 106 | 268 | 4.26e-13 | 70.1 |
| Msa1404240 | AT5G52820.1 | 22.699 | 326 | 212 | 8 | 11 | 305 | 148 | 464 | 1.81e-12 | 68.2 |
| Msa1404240 | AT1G71840.1 | 27.341 | 267 | 172 | 5 | 12 | 273 | 68 | 317 | 4.45e-19 | 87.4 |
| Msa1404240 | AT1G71840.1 | 27.500 | 200 | 126 | 4 | 87 | 284 | 56 | 238 | 3.51e-16 | 79.0 |
| Msa1404240 | AT5G23430.3 | 29.121 | 182 | 115 | 2 | 116 | 297 | 72 | 239 | 5.76e-19 | 88.2 |
| Msa1404240 | AT5G23430.3 | 24.783 | 230 | 158 | 3 | 32 | 261 | 31 | 245 | 9.09e-14 | 72.4 |
| Msa1404240 | AT5G23430.3 | 24.528 | 212 | 140 | 3 | 108 | 319 | 22 | 213 | 3.26e-13 | 70.9 |
| Msa1404240 | AT5G23430.2 | 29.121 | 182 | 115 | 2 | 116 | 297 | 72 | 239 | 5.76e-19 | 88.2 |
| Msa1404240 | AT5G23430.2 | 24.783 | 230 | 158 | 3 | 32 | 261 | 31 | 245 | 9.09e-14 | 72.4 |
| Msa1404240 | AT5G23430.2 | 24.528 | 212 | 140 | 3 | 108 | 319 | 22 | 213 | 3.26e-13 | 70.9 |
| Msa1404240 | AT5G23430.1 | 29.121 | 182 | 115 | 2 | 116 | 297 | 72 | 239 | 5.93e-19 | 88.2 |
| Msa1404240 | AT5G23430.1 | 24.783 | 230 | 158 | 3 | 32 | 261 | 31 | 245 | 9.10e-14 | 72.4 |
| Msa1404240 | AT5G23430.1 | 24.528 | 212 | 140 | 3 | 108 | 319 | 22 | 213 | 3.35e-13 | 70.9 |
| Msa1404240 | AT1G11160.1 | 26.482 | 253 | 168 | 4 | 12 | 264 | 13 | 247 | 1.03e-18 | 87.4 |
| Msa1404240 | AT1G11160.1 | 28.022 | 182 | 117 | 2 | 116 | 297 | 71 | 238 | 6.55e-15 | 76.3 |
| Msa1404240 | AT1G11160.1 | 27.604 | 192 | 124 | 4 | 32 | 223 | 72 | 248 | 2.11e-12 | 68.6 |
| Msa1404240 | AT1G11160.1 | 24.638 | 207 | 136 | 4 | 113 | 319 | 26 | 212 | 1.16e-11 | 66.2 |
| Msa1404240 | AT1G11160.4 | 26.482 | 253 | 168 | 4 | 12 | 264 | 13 | 247 | 1.10e-18 | 87.4 |
| Msa1404240 | AT1G11160.4 | 28.022 | 182 | 117 | 2 | 116 | 297 | 71 | 238 | 6.58e-15 | 75.9 |
| Msa1404240 | AT1G11160.4 | 27.604 | 192 | 124 | 4 | 32 | 223 | 72 | 248 | 2.16e-12 | 68.6 |
| Msa1404240 | AT1G11160.4 | 24.638 | 207 | 136 | 4 | 113 | 319 | 26 | 212 | 1.08e-11 | 66.2 |
| Msa1404240 | AT1G11160.2 | 26.482 | 253 | 168 | 4 | 12 | 264 | 13 | 247 | 1.19e-18 | 87.4 |
| Msa1404240 | AT1G11160.2 | 28.022 | 182 | 117 | 2 | 116 | 297 | 71 | 238 | 7.11e-15 | 75.9 |
| Msa1404240 | AT1G11160.2 | 27.604 | 192 | 124 | 4 | 32 | 223 | 72 | 248 | 2.47e-12 | 68.2 |
| Msa1404240 | AT1G11160.2 | 24.638 | 207 | 136 | 4 | 113 | 319 | 26 | 212 | 1.24e-11 | 66.2 |
| Msa1404240 | AT5G25150.2 | 29.767 | 215 | 136 | 4 | 58 | 272 | 416 | 615 | 1.57e-18 | 86.7 |
| Msa1404240 | AT5G25150.2 | 30.769 | 221 | 128 | 6 | 12 | 229 | 416 | 614 | 2.95e-15 | 77.0 |
| Msa1404240 | AT5G25150.2 | 25.581 | 215 | 139 | 4 | 105 | 319 | 421 | 614 | 1.00e-12 | 69.3 |
| Msa1404240 | AT5G25150.1 | 29.767 | 215 | 136 | 4 | 58 | 272 | 416 | 615 | 1.85e-18 | 86.7 |
| Msa1404240 | AT5G25150.1 | 30.769 | 221 | 128 | 6 | 12 | 229 | 416 | 614 | 2.88e-15 | 77.0 |
| Msa1404240 | AT5G25150.1 | 25.581 | 215 | 139 | 4 | 105 | 319 | 421 | 614 | 1.07e-12 | 69.3 |
| Msa1404240 | AT5G08390.1 | 25.292 | 257 | 172 | 5 | 41 | 297 | 3 | 239 | 2.10e-18 | 86.7 |
| Msa1404240 | AT5G08390.1 | 25.217 | 230 | 157 | 3 | 32 | 261 | 31 | 245 | 5.76e-16 | 79.3 |
| Msa1404240 | AT5G08390.1 | 25.000 | 212 | 139 | 3 | 108 | 319 | 22 | 213 | 1.10e-13 | 72.4 |
| Msa1404240 | AT4G02730.1 | 23.985 | 271 | 182 | 5 | 32 | 295 | 57 | 310 | 6.92e-18 | 83.6 |
| Msa1404240 | AT4G02730.1 | 28.485 | 165 | 110 | 3 | 156 | 319 | 41 | 198 | 3.88e-14 | 72.4 |
| Msa1404240 | AT4G02730.1 | 26.699 | 206 | 133 | 5 | 12 | 215 | 126 | 315 | 1.77e-11 | 64.7 |
| Msa1404240 | AT5G56130.1 | 25.614 | 285 | 181 | 8 | 38 | 317 | 1 | 259 | 8.86e-18 | 82.8 |
| Msa1404240 | AT5G67320.1 | 22.192 | 365 | 218 | 11 | 9 | 320 | 260 | 611 | 1.08e-17 | 84.3 |
| Msa1404240 | AT2G43770.1 | 27.053 | 207 | 133 | 4 | 93 | 297 | 44 | 234 | 9.23e-17 | 80.1 |
| Msa1404240 | AT2G43770.1 | 24.765 | 319 | 198 | 8 | 12 | 317 | 51 | 340 | 1.13e-16 | 80.1 |
| Msa1404240 | AT1G61210.3 | 25.692 | 253 | 170 | 4 | 12 | 264 | 13 | 247 | 1.09e-16 | 81.3 |
| Msa1404240 | AT1G61210.3 | 26.064 | 188 | 124 | 3 | 110 | 297 | 66 | 238 | 5.16e-14 | 73.6 |
| Msa1404240 | AT1G61210.3 | 24.590 | 183 | 124 | 2 | 113 | 295 | 26 | 194 | 3.24e-11 | 64.7 |
| Msa1404240 | AT1G61210.1 | 26.180 | 233 | 157 | 3 | 32 | 264 | 30 | 247 | 1.67e-16 | 80.9 |
| Msa1404240 | AT1G61210.1 | 26.064 | 188 | 124 | 3 | 110 | 297 | 66 | 238 | 6.63e-14 | 73.2 |
| Msa1404240 | AT1G61210.1 | 24.590 | 183 | 124 | 2 | 113 | 295 | 26 | 194 | 3.96e-11 | 64.7 |
| Msa1404240 | AT1G61210.2 | 26.180 | 233 | 157 | 3 | 32 | 264 | 30 | 247 | 1.78e-16 | 80.9 |
| Msa1404240 | AT1G61210.2 | 26.064 | 188 | 124 | 3 | 110 | 297 | 66 | 238 | 7.19e-14 | 72.8 |
| Msa1404240 | AT1G61210.2 | 24.590 | 183 | 124 | 2 | 113 | 295 | 26 | 194 | 3.96e-11 | 64.7 |
| Msa1404240 | AT5G13480.4 | 24.632 | 272 | 186 | 4 | 6 | 276 | 145 | 398 | 2.40e-16 | 80.1 |
| Msa1404240 | AT5G13480.1 | 24.632 | 272 | 186 | 4 | 6 | 276 | 157 | 410 | 2.56e-16 | 80.1 |
| Msa1404240 | AT5G13480.3 | 24.632 | 272 | 186 | 4 | 6 | 276 | 145 | 398 | 2.65e-16 | 80.1 |
| Msa1404240 | AT5G13480.2 | 24.632 | 272 | 186 | 4 | 6 | 276 | 168 | 421 | 2.96e-16 | 79.7 |
| Msa1404240 | AT1G11160.3 | 26.087 | 207 | 138 | 3 | 58 | 264 | 14 | 205 | 1.14e-15 | 78.2 |
| Msa1404240 | AT1G11160.3 | 28.022 | 182 | 117 | 2 | 116 | 297 | 29 | 196 | 5.85e-15 | 76.3 |
| Msa1404240 | AT1G11160.3 | 27.604 | 192 | 124 | 4 | 32 | 223 | 30 | 206 | 2.42e-12 | 68.2 |
| Msa1404240 | AT1G11160.3 | 24.841 | 157 | 111 | 2 | 163 | 319 | 21 | 170 | 2.37e-11 | 65.1 |
| Msa1404240 | AT2G47990.1 | 34.286 | 140 | 90 | 2 | 161 | 298 | 96 | 235 | 2.27e-15 | 77.0 |
| Msa1404240 | AT4G15900.1 | 30.303 | 165 | 108 | 2 | 155 | 319 | 173 | 330 | 4.75e-15 | 75.9 |
| Msa1404240 | AT4G15900.1 | 25.101 | 247 | 169 | 4 | 33 | 279 | 191 | 421 | 3.80e-13 | 70.1 |
| Msa1404240 | AT4G15900.1 | 25.121 | 207 | 130 | 7 | 110 | 314 | 184 | 367 | 4.89e-11 | 63.9 |
| Msa1404240 | AT3G15354.4 | 30.357 | 224 | 130 | 9 | 105 | 321 | 287 | 491 | 1.41e-13 | 71.6 |
| Msa1404240 | AT3G15354.5 | 30.357 | 224 | 130 | 9 | 105 | 321 | 287 | 491 | 1.41e-13 | 71.6 |
| Msa1404240 | AT2G22040.1 | 27.660 | 235 | 147 | 8 | 54 | 281 | 78 | 296 | 1.79e-13 | 70.5 |
| Msa1404240 | AT3G21540.1 | 23.881 | 335 | 219 | 10 | 1 | 321 | 384 | 696 | 2.00e-13 | 71.6 |
| Msa1404240 | AT3G15354.3 | 30.357 | 224 | 130 | 9 | 105 | 321 | 537 | 741 | 2.11e-13 | 71.2 |
| Msa1404240 | AT1G18080.1 | 30.811 | 185 | 117 | 5 | 11 | 189 | 147 | 326 | 2.16e-13 | 70.1 |
| Msa1404240 | AT1G18080.1 | 32.886 | 149 | 92 | 4 | 155 | 297 | 60 | 206 | 7.21e-12 | 65.9 |
| Msa1404240 | AT1G18080.1 | 25.191 | 262 | 157 | 7 | 34 | 272 | 79 | 324 | 6.73e-11 | 62.8 |
| Msa1404240 | AT1G53090.4 | 30.594 | 219 | 126 | 9 | 110 | 321 | 271 | 470 | 3.14e-13 | 70.9 |
| Msa1404240 | AT1G48630.1 | 31.293 | 147 | 96 | 3 | 155 | 297 | 60 | 205 | 3.50e-13 | 69.7 |
| Msa1404240 | AT1G48630.1 | 25.940 | 266 | 170 | 8 | 34 | 292 | 79 | 324 | 4.46e-12 | 66.2 |
| Msa1404240 | AT1G48630.1 | 29.189 | 185 | 120 | 5 | 11 | 189 | 146 | 325 | 5.84e-12 | 65.9 |
| Msa1404240 | AT1G48630.1 | 30.625 | 160 | 93 | 5 | 117 | 272 | 77 | 222 | 3.08e-11 | 63.9 |
| Msa1404240 | AT1G53090.3 | 30.594 | 219 | 126 | 9 | 110 | 321 | 492 | 691 | 5.10e-13 | 70.1 |
| Msa1404240 | AT1G53090.1 | 30.594 | 219 | 126 | 9 | 110 | 321 | 492 | 691 | 5.10e-13 | 70.1 |
| Msa1404240 | AT1G53090.2 | 30.594 | 219 | 126 | 9 | 110 | 321 | 492 | 691 | 5.10e-13 | 70.1 |
| Msa1404240 | AT3G16650.1 | 31.206 | 141 | 95 | 2 | 155 | 295 | 167 | 305 | 1.08e-12 | 68.9 |
| Msa1404240 | AT2G32700.2 | 24.818 | 274 | 176 | 11 | 1 | 270 | 539 | 786 | 1.40e-12 | 68.9 |
| Msa1404240 | AT2G32700.5 | 24.818 | 274 | 176 | 11 | 1 | 270 | 539 | 786 | 1.40e-12 | 68.9 |
| Msa1404240 | AT2G32700.1 | 24.818 | 274 | 176 | 11 | 1 | 270 | 539 | 786 | 1.40e-12 | 68.9 |
| Msa1404240 | AT2G32700.4 | 24.818 | 274 | 176 | 11 | 1 | 270 | 539 | 786 | 1.40e-12 | 68.9 |
| Msa1404240 | AT2G32700.3 | 24.818 | 274 | 176 | 11 | 1 | 270 | 539 | 786 | 1.40e-12 | 68.9 |
| Msa1404240 | AT2G32700.6 | 24.818 | 274 | 176 | 11 | 1 | 270 | 537 | 784 | 1.45e-12 | 68.9 |
| Msa1404240 | AT2G32700.7 | 24.818 | 274 | 176 | 11 | 1 | 270 | 558 | 805 | 1.49e-12 | 68.9 |
| Msa1404240 | AT3G18140.1 | 23.333 | 300 | 171 | 10 | 32 | 284 | 7 | 294 | 2.31e-12 | 67.0 |
| Msa1404240 | AT3G18130.1 | 24.620 | 329 | 195 | 12 | 6 | 292 | 7 | 324 | 2.48e-12 | 67.0 |
| Msa1404240 | AT3G18130.1 | 30.612 | 147 | 97 | 3 | 155 | 297 | 60 | 205 | 4.06e-12 | 66.6 |
| Msa1404240 | AT3G18130.1 | 27.568 | 185 | 123 | 5 | 11 | 189 | 146 | 325 | 3.95e-11 | 63.5 |
| Msa1404240 | AT3G15980.7 | 22.932 | 266 | 188 | 5 | 31 | 293 | 28 | 279 | 8.69e-12 | 66.6 |
| Msa1404240 | AT3G15980.7 | 24.153 | 236 | 162 | 4 | 63 | 295 | 18 | 239 | 6.35e-11 | 63.9 |
| Msa1404240 | AT3G15980.1 | 22.932 | 266 | 188 | 5 | 31 | 293 | 28 | 279 | 1.03e-11 | 66.2 |
| Msa1404240 | AT3G15980.1 | 24.153 | 236 | 162 | 4 | 63 | 295 | 18 | 239 | 7.13e-11 | 63.5 |
| Msa1404240 | AT3G15980.5 | 22.932 | 266 | 188 | 5 | 31 | 293 | 28 | 279 | 1.04e-11 | 66.2 |
| Msa1404240 | AT3G15980.5 | 24.153 | 236 | 162 | 4 | 63 | 295 | 18 | 239 | 8.29e-11 | 63.5 |
| Msa1404240 | AT3G15980.3 | 22.932 | 266 | 188 | 5 | 31 | 293 | 28 | 279 | 1.07e-11 | 66.2 |
| Msa1404240 | AT3G15980.3 | 24.153 | 236 | 162 | 4 | 63 | 295 | 18 | 239 | 8.19e-11 | 63.5 |
| Msa1404240 | AT3G15980.6 | 22.932 | 266 | 188 | 5 | 31 | 293 | 28 | 279 | 1.07e-11 | 66.2 |
| Msa1404240 | AT3G15980.6 | 24.153 | 236 | 162 | 4 | 63 | 295 | 18 | 239 | 8.19e-11 | 63.5 |
| Msa1404240 | AT3G15980.2 | 22.932 | 266 | 188 | 5 | 31 | 293 | 28 | 279 | 1.07e-11 | 66.2 |
| Msa1404240 | AT3G15980.2 | 24.153 | 236 | 162 | 4 | 63 | 295 | 18 | 239 | 8.19e-11 | 63.5 |
| Msa1404240 | AT3G15980.4 | 22.932 | 266 | 188 | 5 | 31 | 293 | 28 | 279 | 1.07e-11 | 66.2 |
| Msa1404240 | AT3G15980.4 | 24.153 | 236 | 162 | 4 | 63 | 295 | 18 | 239 | 8.19e-11 | 63.5 |
| Msa1404240 | AT1G73720.1 | 28.723 | 188 | 115 | 4 | 109 | 296 | 220 | 388 | 1.12e-11 | 65.9 |
| Msa1404240 | AT2G26060.2 | 25.410 | 244 | 146 | 10 | 95 | 318 | 13 | 240 | 1.25e-11 | 65.1 |
| Msa1404240 | AT2G26060.1 | 25.410 | 244 | 146 | 10 | 95 | 318 | 13 | 240 | 1.34e-11 | 65.1 |
| Msa1404240 | AT1G79990.2 | 24.413 | 213 | 146 | 4 | 81 | 291 | 78 | 277 | 2.15e-11 | 65.5 |
| Msa1404240 | AT1G79990.1 | 24.413 | 213 | 146 | 4 | 81 | 291 | 78 | 277 | 2.19e-11 | 65.5 |
| Msa1404240 | AT5G50230.1 | 26.855 | 283 | 176 | 11 | 11 | 285 | 222 | 481 | 3.01e-11 | 64.7 |
| Msa1404240 | AT5G16750.1 | 26.267 | 217 | 137 | 7 | 72 | 280 | 31 | 232 | 5.89e-11 | 63.9 |
| Msa1404240 | AT2G05720.1 | 27.976 | 168 | 97 | 2 | 152 | 295 | 57 | 224 | 8.21e-11 | 62.0 |
| Msa1404240 | AT1G52360.2 | 22.556 | 266 | 189 | 5 | 31 | 293 | 72 | 323 | 9.26e-11 | 63.5 |
Find 111 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAAGATTGAACTATTTA+TGG | 0.091497 | tig0023052:-26665 | Msa1404240:three_prime_UTR |
| AGGTGGTCGGGTGGCGGTTG+CGG | 0.205600 | tig0023052:+29393 | None:intergenic |
| GTGGCAATAGCTGCCCCATC+TGG | 0.222615 | tig0023052:+27037 | None:intergenic |
| GGTGGTCGGGTGGCGGTTGC+GGG | 0.251237 | tig0023052:+29394 | None:intergenic |
| TTCTCTACTAATTGATTTGA+AGG | 0.340653 | tig0023052:-26771 | Msa1404240:three_prime_UTR |
| CGCTCACGACGATTCCGTTT+GGG | 0.357973 | tig0023052:-29431 | Msa1404240:CDS |
| CTTCTACACGAGGAATTGAT+AGG | 0.378120 | tig0023052:+27374 | None:intergenic |
| TCAACTCTACTTCACTTCGT+TGG | 0.397174 | tig0023052:+29542 | None:intergenic |
| ACGCTCACGACGATTCCGTT+TGG | 0.403861 | tig0023052:-29432 | Msa1404240:CDS |
| GGTGAGAAGGAGAGGTGGTC+GGG | 0.404168 | tig0023052:+29381 | None:intergenic |
| GCCTTAGTTGGGACCATGTC+AGG | 0.407942 | tig0023052:-27094 | Msa1404240:CDS |
| CAACTCTACTTCACTTCGTT+GGG | 0.408639 | tig0023052:+29543 | None:intergenic |
| CTATCAATTCCTCGTGTAGA+AGG | 0.408966 | tig0023052:-27373 | Msa1404240:CDS |
| GTTGTCTATCGATTTGATTC+CGG | 0.412974 | tig0023052:+29453 | None:intergenic |
| GGTGCCATTCTAGCAGTTGC+TGG | 0.416864 | tig0023052:-27454 | Msa1404240:CDS |
| AACAGTAGCCTTGGATCATA+AGG | 0.425528 | tig0023052:+27166 | None:intergenic |
| ATGTTTGGCTGGACTTTGAC+AGG | 0.426014 | tig0023052:-26746 | Msa1404240:three_prime_UTR |
| AAGCTCCTCCTTCTGAAGTC+TGG | 0.428122 | tig0023052:-29168 | Msa1404240:CDS |
| AAGAAATATGTGATGTGAAC+GGG | 0.433906 | tig0023052:-29589 | Msa1404240:five_prime_UTR |
| ATTGATTTGAAGGAAATGTT+TGG | 0.440406 | tig0023052:-26761 | Msa1404240:three_prime_UTR |
| CATGTCAGGACATGCTAGTT+GGG | 0.445698 | tig0023052:-27080 | Msa1404240:CDS |
| CAGGCATGAAGTGGCCTTCA+AGG | 0.448183 | tig0023052:+27209 | None:intergenic |
| GTGATAGAACTGTTAGGCTA+TGG | 0.457317 | tig0023052:-27006 | Msa1404240:CDS |
| AAGGAGAGGTGGTCGGGTGG+CGG | 0.461374 | tig0023052:+29387 | None:intergenic |
| GCTGAGGGAAAAGCCTTAGT+TGG | 0.466242 | tig0023052:-27106 | Msa1404240:CDS |
| TGGCAATAGCTGCCCCATCT+GGG | 0.466304 | tig0023052:+27038 | None:intergenic |
| TCCACCAGCAACTGCTAGAA+TGG | 0.469517 | tig0023052:+27450 | None:intergenic |
| TCCTGACATGGTCCCAACTA+AGG | 0.472225 | tig0023052:+27093 | None:intergenic |
| TCGACGAAACGGTACGCCTA+TGG | 0.472782 | tig0023052:-29351 | Msa1404240:CDS |
| TAGTGCATCAGTCAAACTTT+GGG | 0.474897 | tig0023052:-27425 | Msa1404240:CDS |
| ACGACTTGCTTGTGGCTCAA+TGG | 0.474942 | tig0023052:-27281 | Msa1404240:CDS |
| GATACAGAGATATCTAAATC+AGG | 0.476144 | tig0023052:+26832 | None:intergenic |
| TACCGTTTCGTCGAGGGAGC+CGG | 0.481975 | tig0023052:+29360 | None:intergenic |
| CGGCAATTGAGCCGAGAGGA+TGG | 0.488847 | tig0023052:+29260 | None:intergenic |
| TGCCCATGTGACTGCCCAAA+CGG | 0.489414 | tig0023052:+29417 | None:intergenic |
| CTTGCTTGTGGCTCAATGGA+TGG | 0.490041 | tig0023052:-27277 | Msa1404240:CDS |
| ATTTGAAGGAAATGTTTGGC+TGG | 0.491783 | tig0023052:-26757 | Msa1404240:three_prime_UTR |
| ACCAACACCGGCCACTGTCT+CGG | 0.494590 | tig0023052:-29301 | Msa1404240:CDS |
| TGTGTGGATGTGAGCCCAGA+TGG | 0.495754 | tig0023052:-27052 | Msa1404240:CDS |
| ATTCTAGCAGTTGCTGGTGG+AGG | 0.496649 | tig0023052:-27448 | Msa1404240:CDS |
| GAAGCTGAAAACAGTAGCCT+TGG | 0.499277 | tig0023052:+27157 | None:intergenic |
| ATTCCGTTTGGGCAGTCACA+TGG | 0.502235 | tig0023052:-29420 | Msa1404240:CDS |
| CACCGGCTCCCTCGACGAAA+CGG | 0.502345 | tig0023052:-29362 | Msa1404240:CDS |
| CCATGTCAGGACATGCTAGT+TGG | 0.502674 | tig0023052:-27081 | Msa1404240:CDS |
| TTTATTCTCCTTATGATCCA+AGG | 0.502981 | tig0023052:-27174 | Msa1404240:CDS |
| CGCATTTGCCAGACTTCAGA+AGG | 0.502981 | tig0023052:+29160 | None:intergenic |
| TCTGTTGCATGGAGCCCTGA+TGG | 0.505116 | tig0023052:-27307 | Msa1404240:CDS |
| GTTCAAGTGATAGAACTGTT+AGG | 0.509508 | tig0023052:-27012 | Msa1404240:CDS |
| GTAGTGCATCAGTCAAACTT+TGG | 0.510035 | tig0023052:-27426 | Msa1404240:CDS |
| ATATGTGATGTGAACGGGCT+TGG | 0.516641 | tig0023052:-29584 | Msa1404240:five_prime_UTR |
| CTGAGGGAAAAGCCTTAGTT+GGG | 0.525517 | tig0023052:-27105 | Msa1404240:CDS |
| CGTCGAGGGAGCCGGTGAGA+AGG | 0.528073 | tig0023052:+29368 | None:intergenic |
| GGCAATTGAGCCGAGAGGAT+GGG | 0.528637 | tig0023052:+29261 | None:intergenic |
| GCCGAGACAGTGGCCGGTGT+TGG | 0.530328 | tig0023052:+29300 | None:intergenic |
| TCCGTTGCTGCCCATCCTCT+CGG | 0.533078 | tig0023052:-29271 | Msa1404240:CDS |
| TGATAGAACTGTTAGGCTAT+GGG | 0.537678 | tig0023052:-27005 | Msa1404240:CDS |
| ACTTTGGGACACTTCTACGT+GGG | 0.539380 | tig0023052:-27410 | Msa1404240:CDS |
| CTTCGCACATCATTTCCTCC+AGG | 0.542384 | tig0023052:+26908 | None:intergenic |
| GCCGAGAGGATGGGCAGCAA+CGG | 0.543683 | tig0023052:+29270 | None:intergenic |
| AGGGAGCCGGTGAGAAGGAG+AGG | 0.544965 | tig0023052:+29373 | None:intergenic |
| GATGGGGCAGCTATTGCCAC+AGG | 0.547141 | tig0023052:-27034 | Msa1404240:CDS |
| CCCAAACCCAGCGACAAAAG+TGG | 0.550059 | tig0023052:-27349 | Msa1404240:CDS |
| GCCATTCTAGCAGTTGCTGG+TGG | 0.550553 | tig0023052:-27451 | Msa1404240:CDS |
| GCAACCACACGGACCAAGTG+TGG | 0.554761 | tig0023052:-26949 | Msa1404240:CDS |
| CACGGACCAAGTGTGGGGAG+TGG | 0.554970 | tig0023052:-26942 | Msa1404240:CDS |
| TGTTGGTGCGTTCGAGAACA+AGG | 0.555662 | tig0023052:+29317 | None:intergenic |
| AGCGACGCCGAGACAGTGGC+CGG | 0.557402 | tig0023052:+29294 | None:intergenic |
| CGGTGAGAAGGAGAGGTGGT+CGG | 0.558774 | tig0023052:+29380 | None:intergenic |
| AATTTGTCCTGTCTGTTGCA+TGG | 0.564640 | tig0023052:-27318 | Msa1404240:CDS |
| CAGGGCTCCATGCAACAGAC+AGG | 0.567813 | tig0023052:+27311 | None:intergenic |
| CAAGGTCATCGGATTTCCAT+AGG | 0.573281 | tig0023052:+29335 | None:intergenic |
| CGCACATCATTTCCTCCAGG+TGG | 0.573491 | tig0023052:+26911 | None:intergenic |
| CGGAAGCGACGCCGAGACAG+TGG | 0.574570 | tig0023052:+29290 | None:intergenic |
| TAAATGCCACTCCCCACACT+TGG | 0.575870 | tig0023052:+26936 | None:intergenic |
| AATCTTTAAATGCAATGACT+AGG | 0.577073 | tig0023052:+26678 | None:intergenic |
| GAGAAGGAGAGGTGGTCGGG+TGG | 0.578252 | tig0023052:+29384 | None:intergenic |
| GGAGTGGCATTTAGACCACC+TGG | 0.580192 | tig0023052:-26926 | Msa1404240:CDS |
| GCAAATGCGTTTCGATCCCA+AGG | 0.583049 | tig0023052:-29146 | Msa1404240:intron |
| GAGCCGGTGAGAAGGAGAGG+TGG | 0.586712 | tig0023052:+29376 | None:intergenic |
| CAAGAAATATGTGATGTGAA+CGG | 0.592636 | tig0023052:-29590 | Msa1404240:five_prime_UTR |
| GATGGAAAACGACTTGCTTG+TGG | 0.596181 | tig0023052:-27289 | Msa1404240:CDS |
| TGTTCACATGTATGATGCTG+AGG | 0.597783 | tig0023052:-27122 | Msa1404240:CDS |
| CAACCACACGGACCAAGTGT+GGG | 0.600837 | tig0023052:-26948 | Msa1404240:CDS |
| AGCTTCAAGAGTAGCGACAG+TGG | 0.603641 | tig0023052:+29186 | None:intergenic |
| GCGTTCGAGAACAAGGTCAT+CGG | 0.604223 | tig0023052:+29324 | None:intergenic |
| TTCTACACGAGGAATTGATA+GGG | 0.604233 | tig0023052:+27375 | None:intergenic |
| GTGTGGATGTGAGCCCAGAT+GGG | 0.605196 | tig0023052:-27051 | Msa1404240:CDS |
| GTTGTTGCAATGAAACTCGC+CGG | 0.606480 | tig0023052:-29472 | Msa1404240:exon |
| TTCCGTTTGGGCAGTCACAT+GGG | 0.606559 | tig0023052:-29419 | Msa1404240:CDS |
| GTTCTCGAACGCACCAACAC+CGG | 0.609099 | tig0023052:-29313 | Msa1404240:CDS |
| GGCTATGGGATCTTAACATG+AGG | 0.612345 | tig0023052:-26991 | Msa1404240:CDS |
| GCTATCAAGAGAAGAAGAAG+CGG | 0.616284 | tig0023052:+29240 | None:intergenic |
| GAGAACGCACAGGCATGAAG+TGG | 0.618047 | tig0023052:+27200 | None:intergenic |
| CGACCACCTCTCCTTCTCAC+CGG | 0.619054 | tig0023052:-29379 | Msa1404240:CDS |
| CCAACTAGCATGTCCTGACA+TGG | 0.632027 | tig0023052:+27081 | None:intergenic |
| AGTTCTATCACTTGAACCTG+TGG | 0.635592 | tig0023052:+27018 | None:intergenic |
| ATAGGCGTACCGTTTCGTCG+AGG | 0.643084 | tig0023052:+29353 | None:intergenic |
| AACCACACGGACCAAGTGTG+GGG | 0.646543 | tig0023052:-26947 | Msa1404240:CDS |
| CTTGGTAAACTAATAGAGAG+AGG | 0.651831 | tig0023052:-29566 | Msa1404240:five_prime_UTR |
| GAAATGATGTGCGAAGCGGT+CGG | 0.656755 | tig0023052:-26901 | Msa1404240:CDS |
| GTTCACATGTATGATGCTGA+GGG | 0.658597 | tig0023052:-27121 | Msa1404240:CDS |
| ATTTGCCAGACTTCAGAAGG+AGG | 0.661343 | tig0023052:+29163 | None:intergenic |
| GCTATGGGATCTTAACATGA+GGG | 0.661632 | tig0023052:-26990 | Msa1404240:CDS |
| GAATAAACAAGAGAACGCAC+AGG | 0.670302 | tig0023052:+27190 | None:intergenic |
| GGTTTGGGTCCTTCTACACG+AGG | 0.670981 | tig0023052:+27364 | None:intergenic |
| AACTTTGGGACACTTCTACG+TGG | 0.681297 | tig0023052:-27411 | Msa1404240:CDS |
| TGTGGATGTGAGCCCAGATG+GGG | 0.693493 | tig0023052:-27050 | Msa1404240:CDS |
| GGAGGAAATGATGTGCGAAG+CGG | 0.697673 | tig0023052:-26905 | Msa1404240:CDS |
| GAAGCGGCAATTGAGCCGAG+AGG | 0.699560 | tig0023052:+29256 | None:intergenic |
| GCAGACGATGAGCAACCACA+CGG | 0.725867 | tig0023052:-26960 | Msa1404240:CDS |
| GTGGCATTTAGACCACCTGG+AGG | 0.789300 | tig0023052:-26923 | Msa1404240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAAAATAAAAATTGA+TGG | - | tig0023052:27291-27310 | Msa1404240:CDS | 10.0% |
| !! | AAATGTTTACAAAAAAAAAT+AGG | - | tig0023052:27647-27666 | Msa1404240:intron | 10.0% |
| !!! | TTATAGAATTCTCTAAAATT+TGG | + | tig0023052:27197-27216 | None:intergenic | 15.0% |
| !!! | TAGTTTTGATAATGTAAATT+AGG | + | tig0023052:27266-27285 | None:intergenic | 15.0% |
| !!! | TATTTTTCGTTTCTAAATTA+AGG | - | tig0023052:27616-27635 | Msa1404240:intron | 15.0% |
| !! | ATATATCAAAATATTGACAT+AGG | - | tig0023052:27737-27756 | Msa1404240:intron | 15.0% |
| !!! | GTATTGAAATTTTCTTTTTT+TGG | - | tig0023052:28293-28312 | Msa1404240:intron | 15.0% |
| !!! | CAAGATTTCTATTAGTTTTT+TGG | - | tig0023052:27232-27251 | Msa1404240:CDS | 20.0% |
| !!! | AGTAAAAATGTAGTACATTT+TGG | - | tig0023052:27431-27450 | Msa1404240:CDS | 20.0% |
| !!! | ATATAAATGCATCTGTTTTA+TGG | - | tig0023052:28107-28126 | Msa1404240:intron | 20.0% |
| !!! | TATAAATGCATCTGTTTTAT+GGG | - | tig0023052:28108-28127 | Msa1404240:intron | 20.0% |
| !! | ATACATTCTTAACATAAAGT+GGG | + | tig0023052:28475-28494 | None:intergenic | 20.0% |
| !! | GTAAATTTGAAGCAAATTGA+TGG | + | tig0023052:27144-27163 | None:intergenic | 25.0% |
| ! | TGACATGTTACAAATTAGAA+TGG | - | tig0023052:27347-27366 | Msa1404240:CDS | 25.0% |
| !!! | ATGTGTTTTCTTTTTAGTGT+TGG | - | tig0023052:27379-27398 | Msa1404240:CDS | 25.0% |
| !!! | TGTGTTTTCTTTTTAGTGTT+GGG | - | tig0023052:27380-27399 | Msa1404240:CDS | 25.0% |
| ! | GTTCTATTAGAAAAGTAGAA+TGG | - | tig0023052:27453-27472 | Msa1404240:CDS | 25.0% |
| ! | TTAAACTAATTACCCAAACA+GGG | + | tig0023052:27763-27782 | None:intergenic | 25.0% |
| ! | ATTAAACTAATTACCCAAAC+AGG | + | tig0023052:27764-27783 | None:intergenic | 25.0% |
| ! | ATTCATAACACAAGCATTTA+GGG | + | tig0023052:28064-28083 | None:intergenic | 25.0% |
| !! | ATAAATGCATCTGTTTTATG+GGG | - | tig0023052:28109-28128 | Msa1404240:intron | 25.0% |
| !!! | CACTTTTTAACATCATTGTT+GGG | - | tig0023052:28161-28180 | Msa1404240:intron | 25.0% |
| !! | GCAAAAATGCTTTTACTTTA+CGG | + | tig0023052:28229-28248 | None:intergenic | 25.0% |
| ! | TGCAAACATAGTATTTAAAC+AGG | + | tig0023052:28353-28372 | None:intergenic | 25.0% |
| ! | AATCAAGATAACTGACATAT+AGG | + | tig0023052:28439-28458 | None:intergenic | 25.0% |
| ! | GATACATTCTTAACATAAAG+TGG | + | tig0023052:28476-28495 | None:intergenic | 25.0% |
| ! | CATATATGGTTCACATAAAA+GGG | + | tig0023052:28636-28655 | None:intergenic | 25.0% |
| ! | AATATTATGCACATAGATAG+TGG | + | tig0023052:28661-28680 | None:intergenic | 25.0% |
| ! | TCTATGTGCATAATATTCAT+AGG | - | tig0023052:28664-28683 | Msa1404240:intron | 25.0% |
| !!! | TTCTCTACTAATTGATTTGA+AGG | - | tig0023052:29483-29502 | Msa1404240:exon | 25.0% |
| !!! | ATTGATTTGAAGGAAATGTT+TGG | - | tig0023052:29493-29512 | Msa1404240:five_prime_UTR | 25.0% |
| ! | AATCTTTAAATGCAATGACT+AGG | + | tig0023052:29579-29598 | None:intergenic | 25.0% |
| AAGAAATATGTGATGTGAAC+GGG | - | tig0023052:26665-26684 | Msa1404240:three_prime_UTR | 30.0% | |
| TGATGGAATTGAATTACCTT+GGG | + | tig0023052:27127-27146 | None:intergenic | 30.0% | |
| TTGATGGAATTGAATTACCT+TGG | + | tig0023052:27128-27147 | None:intergenic | 30.0% | |
| ! | ATATTTTCCCTGGATAACTT+AGG | + | tig0023052:27523-27542 | None:intergenic | 30.0% |
| GCTAAACTTAACTCATCTAA+GGG | - | tig0023052:27549-27568 | Msa1404240:intron | 30.0% | |
| !!! | TATGTTTTGATGGAGAGTTT+TGG | - | tig0023052:27572-27591 | Msa1404240:intron | 30.0% |
| CTATTTACATAAGCACTTGT+GGG | + | tig0023052:27978-27997 | None:intergenic | 30.0% | |
| TCTATTTACATAAGCACTTG+TGG | + | tig0023052:27979-27998 | None:intergenic | 30.0% | |
| TATGTTTGGATTGAAGATTC+TGG | + | tig0023052:28041-28060 | None:intergenic | 30.0% | |
| GATTCATAACACAAGCATTT+AGG | + | tig0023052:28065-28084 | None:intergenic | 30.0% | |
| ATGCTTGTGTTATGAATCAA+CGG | - | tig0023052:28067-28086 | Msa1404240:intron | 30.0% | |
| CCAACAATGATGTTAAAAAG+TGG | + | tig0023052:28163-28182 | None:intergenic | 30.0% | |
| !!! | CCACTTTTTAACATCATTGT+TGG | - | tig0023052:28160-28179 | Msa1404240:intron | 30.0% |
| ! | TTTTAACATCATTGTTGGGA+TGG | - | tig0023052:28165-28184 | Msa1404240:intron | 30.0% |
| TTTAACATCATTGTTGGGAT+GGG | - | tig0023052:28166-28185 | Msa1404240:intron | 30.0% | |
| ACACAAAAACAAGTAGTAAC+CGG | - | tig0023052:28196-28215 | Msa1404240:intron | 30.0% | |
| TGGGTATCACAAGAAAATAT+TGG | + | tig0023052:28251-28270 | None:intergenic | 30.0% | |
| CAATCAACTTCATGAGATAT+AGG | + | tig0023052:28400-28419 | None:intergenic | 30.0% | |
| ! | CTATATCTCATGAAGTTGAT+TGG | - | tig0023052:28398-28417 | Msa1404240:intron | 30.0% |
| AATAGTCCATTATTGCATAC+AGG | - | tig0023052:28526-28545 | Msa1404240:intron | 30.0% | |
| ATAGTCCATTATTGCATACA+GGG | - | tig0023052:28527-28546 | Msa1404240:intron | 30.0% | |
| ACATATTAACAGTGAATCGA+CGG | + | tig0023052:28612-28631 | None:intergenic | 30.0% | |
| CCATATATGGTTCACATAAA+AGG | + | tig0023052:28637-28656 | None:intergenic | 30.0% | |
| ! | CCTTTTATGTGAACCATATA+TGG | - | tig0023052:28634-28653 | Msa1404240:intron | 30.0% |
| CGTTATATACAAGTGTCAAA+AGG | + | tig0023052:28705-28724 | None:intergenic | 30.0% | |
| !! | GCAAAAACTATTATCGATTC+TGG | + | tig0023052:28738-28757 | None:intergenic | 30.0% |
| ATTAAAAGTTCTCAACCTTC+AGG | - | tig0023052:28778-28797 | Msa1404240:intron | 30.0% | |
| TTAAAAGTTCTCAACCTTCA+GGG | - | tig0023052:28779-28798 | Msa1404240:intron | 30.0% | |
| TTGCACATCAAAAACAGAAA+TGG | + | tig0023052:29005-29024 | None:intergenic | 30.0% | |
| TTCAAGGTGATGCAAAAATT+TGG | + | tig0023052:29032-29051 | None:intergenic | 30.0% | |
| ! | AAATTTTTGCATCACCTTGA+AGG | - | tig0023052:29031-29050 | Msa1404240:intron | 30.0% |
| TTTATTCTCCTTATGATCCA+AGG | - | tig0023052:29080-29099 | Msa1404240:intron | 30.0% | |
| GATACAGAGATATCTAAATC+AGG | + | tig0023052:29425-29444 | None:intergenic | 30.0% | |
| CTTGGTAAACTAATAGAGAG+AGG | - | tig0023052:26688-26707 | Msa1404240:three_prime_UTR | 35.0% | |
| !! | GTTGTCTATCGATTTGATTC+CGG | + | tig0023052:26804-26823 | None:intergenic | 35.0% |
| ! | TGTTTTGTCCTAAGTTATCC+AGG | - | tig0023052:27512-27531 | Msa1404240:intron | 35.0% |
| ! | GTTTTGTCCTAAGTTATCCA+GGG | - | tig0023052:27513-27532 | Msa1404240:intron | 35.0% |
| TATCCAGGGAAAATATCTGT+TGG | - | tig0023052:27527-27546 | Msa1404240:intron | 35.0% | |
| GGCTAAACTTAACTCATCTA+AGG | - | tig0023052:27548-27567 | Msa1404240:intron | 35.0% | |
| !! | CATCTAAGGGTATGTTTTGA+TGG | - | tig0023052:27562-27581 | Msa1404240:intron | 35.0% |
| TTTGGATTGAAGATTCTGGA+GGG | + | tig0023052:28037-28056 | None:intergenic | 35.0% | |
| ! | ACAAGCATTTAGGGTATGTT+TGG | + | tig0023052:28055-28074 | None:intergenic | 35.0% |
| TTTACTTTACGGAAGTTAGC+CGG | + | tig0023052:28218-28237 | None:intergenic | 35.0% | |
| TGCTACAAATGTGAAATCGT+GGG | + | tig0023052:28270-28289 | None:intergenic | 35.0% | |
| ATGCTACAAATGTGAAATCG+TGG | + | tig0023052:28271-28290 | None:intergenic | 35.0% | |
| !! | ATAATGGACTATTCTGAGAC+TGG | + | tig0023052:28519-28538 | None:intergenic | 35.0% |
| TAGTCCATTATTGCATACAG+GGG | - | tig0023052:28528-28547 | Msa1404240:intron | 35.0% | |
| AGCTTTCAGTATAAGAACTG+AGG | + | tig0023052:28565-28584 | None:intergenic | 35.0% | |
| !! | CATAGATAGTGGACCATATA+TGG | + | tig0023052:28650-28669 | None:intergenic | 35.0% |
| ! | TAATAGTTTTTGCCACACAG+TGG | - | tig0023052:28745-28764 | Msa1404240:intron | 35.0% |
| ATGATTAAACAACCACTGTG+TGG | + | tig0023052:28760-28779 | None:intergenic | 35.0% | |
| TAGTGCATCAGTCAAACTTT+GGG | - | tig0023052:28829-28848 | Msa1404240:intron | 35.0% | |
| TTCTACACGAGGAATTGATA+GGG | + | tig0023052:28882-28901 | None:intergenic | 35.0% | |
| GTTCAAGTGATAGAACTGTT+AGG | - | tig0023052:29242-29261 | Msa1404240:CDS | 35.0% | |
| TGATAGAACTGTTAGGCTAT+GGG | - | tig0023052:29249-29268 | Msa1404240:CDS | 35.0% | |
| ATTTGAAGGAAATGTTTGGC+TGG | - | tig0023052:29497-29516 | Msa1404240:five_prime_UTR | 35.0% | |
| CAACTCTACTTCACTTCGTT+GGG | + | tig0023052:26714-26733 | None:intergenic | 40.0% | |
| TCAACTCTACTTCACTTCGT+TGG | + | tig0023052:26715-26734 | None:intergenic | 40.0% | |
| GCTATCAAGAGAAGAAGAAG+CGG | + | tig0023052:27017-27036 | None:intergenic | 40.0% | |
| ! | TAGCCAACAGATATTTTCCC+TGG | + | tig0023052:27533-27552 | None:intergenic | 40.0% |
| !! | GTTTTGATGGAGAGTTTTGG+AGG | - | tig0023052:27575-27594 | Msa1404240:intron | 40.0% |
| ATATTGACATAGGCCCTGTT+TGG | - | tig0023052:27747-27766 | Msa1404240:intron | 40.0% | |
| TATTGACATAGGCCCTGTTT+GGG | - | tig0023052:27748-27767 | Msa1404240:intron | 40.0% | |
| GTTTGGATTGAAGATTCTGG+AGG | + | tig0023052:28038-28057 | None:intergenic | 40.0% | |
| ! | TGCATCTGTTTTATGGGGAA+AGG | - | tig0023052:28114-28133 | Msa1404240:intron | 40.0% |
| ! | GGATTTTGCTTCCAATTCTG+CGG | - | tig0023052:28135-28154 | Msa1404240:intron | 40.0% |
| !!! | TTCTTTTTTTGGTCCTGCAC+TGG | - | tig0023052:28304-28323 | Msa1404240:intron | 40.0% |
| GGTTACATGCGTAAGTAAGT+TGG | + | tig0023052:28498-28517 | None:intergenic | 40.0% | |
| CGACGGAACAAGGAATTAAA+TGG | + | tig0023052:28595-28614 | None:intergenic | 40.0% | |
| GTAGTGCATCAGTCAAACTT+TGG | - | tig0023052:28828-28847 | Msa1404240:intron | 40.0% | |
| CTTCTACACGAGGAATTGAT+AGG | + | tig0023052:28883-28902 | None:intergenic | 40.0% | |
| CTATCAATTCCTCGTGTAGA+AGG | - | tig0023052:28881-28900 | Msa1404240:intron | 40.0% | |
| AATTTGTCCTGTCTGTTGCA+TGG | - | tig0023052:28936-28955 | Msa1404240:intron | 40.0% | |
| !! | AAGCAAGTCGTTTTCCATCA+GGG | + | tig0023052:28964-28983 | None:intergenic | 40.0% |
| GAATAAACAAGAGAACGCAC+AGG | + | tig0023052:29067-29086 | None:intergenic | 40.0% | |
| ! | AACAGTAGCCTTGGATCATA+AGG | + | tig0023052:29091-29110 | None:intergenic | 40.0% |
| ! | CTGTTTTCAGCTTCAGATGA+TGG | - | tig0023052:29106-29125 | Msa1404240:intron | 40.0% |
| TGTTCACATGTATGATGCTG+AGG | - | tig0023052:29132-29151 | Msa1404240:intron | 40.0% | |
| GTTCACATGTATGATGCTGA+GGG | - | tig0023052:29133-29152 | Msa1404240:intron | 40.0% | |
| !! | TGCTAGTTGGGTTTTATGTG+TGG | - | tig0023052:29186-29205 | Msa1404240:CDS | 40.0% |
| AGTTCTATCACTTGAACCTG+TGG | + | tig0023052:29239-29258 | None:intergenic | 40.0% | |
| GTGATAGAACTGTTAGGCTA+TGG | - | tig0023052:29248-29267 | Msa1404240:CDS | 40.0% | |
| GCTATGGGATCTTAACATGA+GGG | - | tig0023052:29264-29283 | Msa1404240:CDS | 40.0% | |
| ! | ATATGTGATGTGAACGGGCT+TGG | - | tig0023052:26670-26689 | Msa1404240:three_prime_UTR | 45.0% |
| GTTGTTGCAATGAAACTCGC+CGG | - | tig0023052:26782-26801 | Msa1404240:three_prime_UTR | 45.0% | |
| CAAGGTCATCGGATTTCCAT+AGG | + | tig0023052:26922-26941 | None:intergenic | 45.0% | |
| ATTTGCCAGACTTCAGAAGG+AGG | + | tig0023052:27094-27113 | None:intergenic | 45.0% | |
| ! | TGGAGGGCTAAGAACTTGTT+TGG | + | tig0023052:28021-28040 | None:intergenic | 45.0% |
| AAAAAGTGGCACCGCAGAAT+TGG | + | tig0023052:28149-28168 | None:intergenic | 45.0% | |
| AATTGCAAACACACCAGTGC+AGG | + | tig0023052:28320-28339 | None:intergenic | 45.0% | |
| ! | TGCACTGGTGTGTTTGCAAT+TGG | - | tig0023052:28319-28338 | Msa1404240:intron | 45.0% |
| CAAGCCCCTGTATGCAATAA+TGG | + | tig0023052:28535-28554 | None:intergenic | 45.0% | |
| AACAGTGAATCGACGGAACA+AGG | + | tig0023052:28605-28624 | None:intergenic | 45.0% | |
| !! | AACTTTGGGACACTTCTACG+TGG | - | tig0023052:28843-28862 | Msa1404240:intron | 45.0% |
| !! | ACTTTGGGACACTTCTACGT+GGG | - | tig0023052:28844-28863 | Msa1404240:intron | 45.0% |
| !! | CAAGCAAGTCGTTTTCCATC+AGG | + | tig0023052:28965-28984 | None:intergenic | 45.0% |
| ! | GATGGAAAACGACTTGCTTG+TGG | - | tig0023052:28965-28984 | Msa1404240:intron | 45.0% |
| GAAGCTGAAAACAGTAGCCT+TGG | + | tig0023052:29100-29119 | None:intergenic | 45.0% | |
| CTGAGGGAAAAGCCTTAGTT+GGG | - | tig0023052:29149-29168 | Msa1404240:CDS | 45.0% | |
| CATGTCAGGACATGCTAGTT+GGG | - | tig0023052:29174-29193 | Msa1404240:CDS | 45.0% | |
| GGCTATGGGATCTTAACATG+AGG | - | tig0023052:29263-29282 | Msa1404240:CDS | 45.0% | |
| ATGTTTGGCTGGACTTTGAC+AGG | - | tig0023052:29508-29527 | Msa1404240:five_prime_UTR | 45.0% | |
| ATTCCGTTTGGGCAGTCACA+TGG | - | tig0023052:26834-26853 | Msa1404240:exon | 50.0% | |
| TTCCGTTTGGGCAGTCACAT+GGG | - | tig0023052:26835-26854 | Msa1404240:exon | 50.0% | |
| GCGTTCGAGAACAAGGTCAT+CGG | + | tig0023052:26933-26952 | None:intergenic | 50.0% | |
| TGTTGGTGCGTTCGAGAACA+AGG | + | tig0023052:26940-26959 | None:intergenic | 50.0% | |
| AGCTTCAAGAGTAGCGACAG+TGG | + | tig0023052:27071-27090 | None:intergenic | 50.0% | |
| !! | AAGCTCCTCCTTCTGAAGTC+TGG | - | tig0023052:27086-27105 | Msa1404240:CDS | 50.0% |
| CGCATTTGCCAGACTTCAGA+AGG | + | tig0023052:27097-27116 | None:intergenic | 50.0% | |
| GCAAATGCGTTTCGATCCCA+AGG | - | tig0023052:27108-27127 | Msa1404240:CDS | 50.0% | |
| !!! | GATGGAGAGTTTTGGAGGAG+AGG | - | tig0023052:27580-27599 | Msa1404240:intron | 50.0% |
| !!! | AGTTTTGGAGGAGAGGAGAG+TGG | - | tig0023052:27587-27606 | Msa1404240:intron | 50.0% |
| TCCACCAGCAACTGCTAGAA+TGG | + | tig0023052:28807-28826 | None:intergenic | 50.0% | |
| ATTCTAGCAGTTGCTGGTGG+AGG | - | tig0023052:28806-28825 | Msa1404240:intron | 50.0% | |
| !! | CCACTTTTGTCGCTGGGTTT+GGG | + | tig0023052:28908-28927 | None:intergenic | 50.0% |
| !!! | TTGCTGCCACTTTTGTCGCT+GGG | + | tig0023052:28914-28933 | None:intergenic | 50.0% |
| ! | ACGACTTGCTTGTGGCTCAA+TGG | - | tig0023052:28973-28992 | Msa1404240:intron | 50.0% |
| CTTGCTTGTGGCTCAATGGA+TGG | - | tig0023052:28977-28996 | Msa1404240:intron | 50.0% | |
| GCTGAGGGAAAAGCCTTAGT+TGG | - | tig0023052:29148-29167 | Msa1404240:CDS | 50.0% | |
| TCCTGACATGGTCCCAACTA+AGG | + | tig0023052:29164-29183 | None:intergenic | 50.0% | |
| CCAACTAGCATGTCCTGACA+TGG | + | tig0023052:29176-29195 | None:intergenic | 50.0% | |
| CCATGTCAGGACATGCTAGT+TGG | - | tig0023052:29173-29192 | Msa1404240:CDS | 50.0% | |
| TAAATGCCACTCCCCACACT+TGG | + | tig0023052:29321-29340 | None:intergenic | 50.0% | |
| CTTCGCACATCATTTCCTCC+AGG | + | tig0023052:29349-29368 | None:intergenic | 50.0% | |
| GGAGGAAATGATGTGCGAAG+CGG | - | tig0023052:29349-29368 | Msa1404240:CDS | 50.0% | |
| GAAATGATGTGCGAAGCGGT+CGG | - | tig0023052:29353-29372 | Msa1404240:CDS | 50.0% | |
| ACGCTCACGACGATTCCGTT+TGG | - | tig0023052:26822-26841 | Msa1404240:three_prime_UTR | 55.0% | |
| CGCTCACGACGATTCCGTTT+GGG | - | tig0023052:26823-26842 | Msa1404240:three_prime_UTR | 55.0% | |
| TGCCCATGTGACTGCCCAAA+CGG | + | tig0023052:26840-26859 | None:intergenic | 55.0% | |
| TAGGCGTACCGTTTCGTCGA+GGG | + | tig0023052:26903-26922 | None:intergenic | 55.0% | |
| ATAGGCGTACCGTTTCGTCG+AGG | + | tig0023052:26904-26923 | None:intergenic | 55.0% | |
| TCGACGAAACGGTACGCCTA+TGG | - | tig0023052:26903-26922 | Msa1404240:CDS | 55.0% | |
| GTTCTCGAACGCACCAACAC+CGG | - | tig0023052:26941-26960 | Msa1404240:CDS | 55.0% | |
| GGCAATTGAGCCGAGAGGAT+GGG | + | tig0023052:26996-27015 | None:intergenic | 55.0% | |
| TTTGGAGGAGAGGAGAGTGG+AGG | - | tig0023052:27590-27609 | Msa1404240:intron | 55.0% | |
| CTGCTAGAATGGCACCCTGA+AGG | + | tig0023052:28796-28815 | None:intergenic | 55.0% | |
| !! | GGTGCCATTCTAGCAGTTGC+TGG | - | tig0023052:28800-28819 | Msa1404240:intron | 55.0% |
| GCCATTCTAGCAGTTGCTGG+TGG | - | tig0023052:28803-28822 | Msa1404240:intron | 55.0% | |
| GGTTTGGGTCCTTCTACACG+AGG | + | tig0023052:28893-28912 | None:intergenic | 55.0% | |
| CCCAAACCCAGCGACAAAAG+TGG | - | tig0023052:28905-28924 | Msa1404240:intron | 55.0% | |
| !!! | GCCACTTTTGTCGCTGGGTT+TGG | + | tig0023052:28909-28928 | None:intergenic | 55.0% |
| !!! | CTTGCTGCCACTTTTGTCGC+TGG | + | tig0023052:28915-28934 | None:intergenic | 55.0% |
| TCTGTTGCATGGAGCCCTGA+TGG | - | tig0023052:28947-28966 | Msa1404240:intron | 55.0% | |
| CAGGCATGAAGTGGCCTTCA+AGG | + | tig0023052:29048-29067 | None:intergenic | 55.0% | |
| GAGAACGCACAGGCATGAAG+TGG | + | tig0023052:29057-29076 | None:intergenic | 55.0% | |
| GCCTTAGTTGGGACCATGTC+AGG | - | tig0023052:29160-29179 | Msa1404240:CDS | 55.0% | |
| TGTGTGGATGTGAGCCCAGA+TGG | - | tig0023052:29202-29221 | Msa1404240:CDS | 55.0% | |
| GTGTGGATGTGAGCCCAGAT+GGG | - | tig0023052:29203-29222 | Msa1404240:CDS | 55.0% | |
| TGTGGATGTGAGCCCAGATG+GGG | - | tig0023052:29204-29223 | Msa1404240:CDS | 55.0% | |
| TGGCAATAGCTGCCCCATCT+GGG | + | tig0023052:29219-29238 | None:intergenic | 55.0% | |
| GCAGACGATGAGCAACCACA+CGG | - | tig0023052:29294-29313 | Msa1404240:CDS | 55.0% | |
| CAACCACACGGACCAAGTGT+GGG | - | tig0023052:29306-29325 | Msa1404240:CDS | 55.0% | |
| AACCACACGGACCAAGTGTG+GGG | - | tig0023052:29307-29326 | Msa1404240:CDS | 55.0% | |
| GGAGTGGCATTTAGACCACC+TGG | - | tig0023052:29328-29347 | Msa1404240:CDS | 55.0% | |
| GTGGCATTTAGACCACCTGG+AGG | - | tig0023052:29331-29350 | Msa1404240:CDS | 55.0% | |
| CGCACATCATTTCCTCCAGG+TGG | + | tig0023052:29346-29365 | None:intergenic | 55.0% | |
| GGTGAGAAGGAGAGGTGGTC+GGG | + | tig0023052:26876-26895 | None:intergenic | 60.0% | |
| CGGTGAGAAGGAGAGGTGGT+CGG | + | tig0023052:26877-26896 | None:intergenic | 60.0% | |
| CGACCACCTCTCCTTCTCAC+CGG | - | tig0023052:26875-26894 | Msa1404240:CDS | 60.0% | |
| TACCGTTTCGTCGAGGGAGC+CGG | + | tig0023052:26897-26916 | None:intergenic | 60.0% | |
| ACCAACACCGGCCACTGTCT+CGG | - | tig0023052:26953-26972 | Msa1404240:CDS | 60.0% | |
| TCCGTTGCTGCCCATCCTCT+CGG | - | tig0023052:26983-27002 | Msa1404240:CDS | 60.0% | |
| CGGCAATTGAGCCGAGAGGA+TGG | + | tig0023052:26997-27016 | None:intergenic | 60.0% | |
| GAAGCGGCAATTGAGCCGAG+AGG | + | tig0023052:27001-27020 | None:intergenic | 60.0% | |
| CAGGGCTCCATGCAACAGAC+AGG | + | tig0023052:28946-28965 | None:intergenic | 60.0% | |
| GTGGCAATAGCTGCCCCATC+TGG | + | tig0023052:29220-29239 | None:intergenic | 60.0% | |
| GATGGGGCAGCTATTGCCAC+AGG | - | tig0023052:29220-29239 | Msa1404240:CDS | 60.0% | |
| GCAACCACACGGACCAAGTG+TGG | - | tig0023052:29305-29324 | Msa1404240:CDS | 60.0% | |
| AAGGAGAGGTGGTCGGGTGG+CGG | + | tig0023052:26870-26889 | None:intergenic | 65.0% | |
| GAGAAGGAGAGGTGGTCGGG+TGG | + | tig0023052:26873-26892 | None:intergenic | 65.0% | |
| GAGCCGGTGAGAAGGAGAGG+TGG | + | tig0023052:26881-26900 | None:intergenic | 65.0% | |
| AGGGAGCCGGTGAGAAGGAG+AGG | + | tig0023052:26884-26903 | None:intergenic | 65.0% | |
| !! | CACCGGCTCCCTCGACGAAA+CGG | - | tig0023052:26892-26911 | Msa1404240:CDS | 65.0% |
| GCCGAGAGGATGGGCAGCAA+CGG | + | tig0023052:26987-27006 | None:intergenic | 65.0% | |
| CTCCCCACACTTGGTCCGTG+TGG | + | tig0023052:29312-29331 | None:intergenic | 65.0% | |
| CACGGACCAAGTGTGGGGAG+TGG | - | tig0023052:29312-29331 | Msa1404240:CDS | 65.0% | |
| ! | AGGTGGTCGGGTGGCGGTTG+CGG | + | tig0023052:26864-26883 | None:intergenic | 70.0% |
| CGTCGAGGGAGCCGGTGAGA+AGG | + | tig0023052:26889-26908 | None:intergenic | 70.0% | |
| GCCGAGACAGTGGCCGGTGT+TGG | + | tig0023052:26957-26976 | None:intergenic | 70.0% | |
| AGCGACGCCGAGACAGTGGC+CGG | + | tig0023052:26963-26982 | None:intergenic | 70.0% | |
| CGGAAGCGACGCCGAGACAG+TGG | + | tig0023052:26967-26986 | None:intergenic | 70.0% | |
| ! | GGTGGTCGGGTGGCGGTTGC+GGG | + | tig0023052:26863-26882 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023052 | gene | 26665 | 29611 | 26665 | ID=Msa1404240;Name=Msa1404240 |
| tig0023052 | mRNA | 26665 | 29611 | 26665 | ID=Msa1404240-mRNA-1;Parent=Msa1404240;Name=Msa1404240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=126|1|1|1|1|1|2|185|321 |
| tig0023052 | exon | 26665 | 27476 | 26665 | ID=Msa1404240-mRNA-1:exon:19697;Parent=Msa1404240-mRNA-1 |
| tig0023052 | exon | 29147 | 29611 | 29147 | ID=Msa1404240-mRNA-1:exon:19696;Parent=Msa1404240-mRNA-1 |
| tig0023052 | five_prime_UTR | 29486 | 29611 | 29486 | ID=Msa1404240-mRNA-1:five_prime_utr;Parent=Msa1404240-mRNA-1 |
| tig0023052 | CDS | 29147 | 29485 | 29147 | ID=Msa1404240-mRNA-1:cds;Parent=Msa1404240-mRNA-1 |
| tig0023052 | CDS | 26850 | 27476 | 26850 | ID=Msa1404240-mRNA-1:cds;Parent=Msa1404240-mRNA-1 |
| tig0023052 | three_prime_UTR | 26665 | 26849 | 26665 | ID=Msa1404240-mRNA-1:three_prime_utr;Parent=Msa1404240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
