AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0601410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0601410 MtrunA17_Chr4g0026411 95.670 1224 46 2 20 1243 20 1236 0.0 2397
Msa0601410 MtrunA17_Chr2g0299971 29.456 1341 735 51 1 1243 45 1272 1.73e-105 362
Msa0601410 MtrunA17_Chr1g0210751 29.877 1302 653 40 1 1237 48 1154 8.97e-102 350
Msa0601410 MtrunA17_Chr4g0070881 28.670 1301 765 40 25 1243 75 1294 1.99e-91 322
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0601410 AT5G22450.3 41.647 1263 598 37 1 1237 1 1150 0.0 742
Msa0601410 AT5G22450.1 41.647 1263 598 37 1 1237 1 1150 0.0 742
Msa0601410 AT5G22450.2 41.647 1263 598 37 1 1237 1 1150 0.0 742
Msa0601410 AT2G19390.1 29.666 1318 685 57 12 1243 50 1211 9.17e-94 328
Msa0601410 AT2G19390.2 29.666 1318 685 57 12 1243 50 1211 9.17e-94 328
Msa0601410 AT4G29790.1 29.514 1318 686 52 12 1243 51 1211 3.91e-92 323

Find 356 sgRNAs with CRISPR-Local

Find 816 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTCGCTTCTTTGAGTTTA+AGG 0.111310 4_2:+44021903 None:intergenic
AACATTGGTTCTCCTGATTT+TGG 0.130123 4_2:-44018204 Msa0601410:CDS
CGCTTGTTCAGCATTGATTT+TGG 0.130794 4_2:+44021772 None:intergenic
TAAATCCCTACCATTATTTC+TGG 0.138702 4_2:+44016541 None:intergenic
CAGGCAGATTGCATTGTTTC+TGG 0.158488 4_2:-44014509 Msa0601410:CDS
GGTTGTTATTGCAGCAAATA+TGG 0.173923 4_2:-44018288 Msa0601410:intron
TCAAAACCTTGCGTTCTTTC+TGG 0.181626 4_2:+44018247 None:intergenic
ATCAATCTCCATAATTTAAT+TGG 0.185068 4_2:-44013209 Msa0601410:three_prime_UTR
GCAAGAACATGATTGTATTA+TGG 0.202083 4_2:-44013553 Msa0601410:CDS
GAGGGGAAAACATTATATTT+TGG 0.216641 4_2:+44014555 None:intergenic
TGAGGAAAATATATCTAAAT+TGG 0.222427 4_2:-44021941 Msa0601410:CDS
TTAATGATGCTCAGGGTTTC+AGG 0.226650 4_2:-44021052 Msa0601410:intron
CAAGAACATGATTGTATTAT+GGG 0.229062 4_2:-44013552 Msa0601410:CDS
ATGTCATTCATTTAGTTAAA+AGG 0.232702 4_2:-44013044 Msa0601410:three_prime_UTR
GCTCCTGGGCCCATTGATTT+AGG 0.244677 4_2:+44022538 None:intergenic
CAAATTGAAGCGAGAAAATT+AGG 0.247593 4_2:-44014452 Msa0601410:intron
TGATCATCACAGACCCATTC+TGG 0.247966 4_2:+44014090 None:intergenic
ATATGCAATTCTTCTGAATA+TGG 0.252808 4_2:+44016833 None:intergenic
TTAAGTTCAATAGACGAATT+TGG 0.254796 4_2:-44013642 Msa0601410:CDS
ACCTCAGAAGACCATTCTTT+TGG 0.270046 4_2:-44022571 Msa0601410:CDS
AATTCAACACTCTACTATCT+AGG 0.276540 4_2:-44023813 Msa0601410:five_prime_UTR
CAAAGAAGTCTTTGGAATAA+TGG 0.277662 4_2:+44017027 None:intergenic
TATTCTTTGCTTCACTTTGC+TGG 0.277666 4_2:+44016968 None:intergenic
AAAGAAGTCTTTGGAATAAT+GGG 0.282055 4_2:+44017028 None:intergenic
AAACTAGGATTATATAATTC+AGG 0.282481 4_2:+44016643 None:intergenic
TTTCTTGGAGTGGAGAAATT+TGG 0.283170 4_2:-44013375 Msa0601410:three_prime_UTR
CTTGGAGTCATATTATCATT+TGG 0.293465 4_2:+44021808 None:intergenic
GTTAAAAGGTGCCTAAAGTA+TGG 0.294431 4_2:-44013030 Msa0601410:three_prime_UTR
CCAGCTCTGGAATTAGAATT+TGG 0.299494 4_2:+44013915 None:intergenic
TTTGGGGTCTTGACTTCTCT+TGG 0.300754 4_2:+44021790 None:intergenic
TCTCTTTCTGTAAGCCATTT+CGG 0.301423 4_2:+44015971 None:intergenic
TGGTCTTCTGAGGTGTTTCC+AGG 0.303080 4_2:+44022580 None:intergenic
AAGTCAATTCCTGGATCTAT+TGG 0.303452 4_2:-44019444 Msa0601410:CDS
GTGGTCTTTGTCCACCCCAC+TGG 0.303765 4_2:+44018874 None:intergenic
AGCTTTGCTACATGTATTAC+TGG 0.310337 4_2:+44014481 None:intergenic
TTTAACTCCCCTGAGGCTCC+TGG 0.315843 4_2:+44022523 None:intergenic
TTAGAGCACAAAGAAGTCTT+TGG 0.317557 4_2:+44017019 None:intergenic
TGTCCACCCCACTGGGTCAT+TGG 0.318457 4_2:+44018882 None:intergenic
TTAGGCCTTGTTTCCTGAAC+TGG 0.319082 4_2:+44018393 None:intergenic
TTGGAGTCATATTATCATTT+GGG 0.324391 4_2:+44021809 None:intergenic
GCTCAATATTGCTGACGATT+TGG 0.328641 4_2:-44017399 Msa0601410:CDS
CAGTAAAACCAATTAAATTA+TGG 0.329804 4_2:+44013201 None:intergenic
GGCCACAAGATCTTGGTTCT+TGG 0.341346 4_2:-44013599 Msa0601410:CDS
ATCTAAATTGGATGGGTATA+CGG 0.342391 4_2:-44021929 Msa0601410:CDS
TTTCGTAGAAAGTTGTATAT+AGG 0.342773 4_2:-44013298 Msa0601410:three_prime_UTR
TCCATTCTATCCCGGTCTTT+CGG 0.344424 4_2:+44016883 None:intergenic
ATAGACGAATTTGGTGTATC+TGG 0.344745 4_2:-44013633 Msa0601410:CDS
CTGACTTGTTTCTCAGCATT+AGG 0.345748 4_2:-44022771 Msa0601410:five_prime_UTR
CAATGACAGGCAACCAGCTC+TGG 0.347833 4_2:+44013902 None:intergenic
GTGATGTAACCTGGGTTTCT+TGG 0.349991 4_2:-44013390 Msa0601410:three_prime_UTR
GGGAGAGCTAAAGAGGGTTC+TGG 0.351684 4_2:-44022611 Msa0601410:CDS
GAATGCCAGTGACTTTGCTT+TGG 0.353889 4_2:-44018586 Msa0601410:CDS
GCACTAACTGAACCCGTTCT+TGG 0.358944 4_2:+44019041 None:intergenic
CAGAGCTGGTTGCCTGTCAT+TGG 0.360506 4_2:-44013901 Msa0601410:CDS
CTTTACAAAGCACCGGAGTT+TGG 0.362519 4_2:-44016744 Msa0601410:CDS
TGCGAAGAAGAGCGTGAATT+GGG 0.370052 4_2:+44023779 None:intergenic
GATAGACTAGAATCATAAAT+AGG 0.371943 4_2:+44013777 None:intergenic
CTTGACGGTGCTGTTCCTAT+TGG 0.374828 4_2:-44013993 Msa0601410:CDS
CTCTTTCCTTTGACTCCAAT+AGG 0.377034 4_2:+44013978 None:intergenic
GTACTGCATCGAACACATTT+AGG 0.378371 4_2:-44016786 Msa0601410:CDS
CTCACGCAACCTTGAAGTTC+AGG 0.378643 4_2:-44018808 Msa0601410:CDS
ATAAGACCAGGCCTTCCATT+AGG 0.380696 4_2:-44018450 Msa0601410:CDS
TGGTTTATATCCAGAAATAA+TGG 0.380973 4_2:-44016551 Msa0601410:intron
ACTTTGCTTTGGCTGCTGAT+AGG 0.384405 4_2:-44018575 Msa0601410:CDS
TGTTCAAGATGCCTCCAAAA+AGG 0.385912 4_2:-44022485 Msa0601410:CDS
AGTGGAGAAATTTGGTGGTT+AGG 0.393249 4_2:-44013367 Msa0601410:three_prime_UTR
AAAGACGGGGCATCATTATC+TGG 0.395145 4_2:-44013726 Msa0601410:CDS
CTTTGCTTTGGCTGCTGATA+GGG 0.395929 4_2:-44018574 Msa0601410:CDS
TCGTCTATTGAACTTAAATC+AGG 0.398688 4_2:+44013648 None:intergenic
CTCAAGGTTCACAGGGTAGA+AGG 0.400918 4_2:-44017110 Msa0601410:CDS
ACCTATACTGAAGCCAGTTC+AGG 0.403280 4_2:-44018406 Msa0601410:CDS
TGTAAAGGACTGGATGTGTC+TGG 0.407822 4_2:+44016760 None:intergenic
ATTGACGATAAATTCCTTCC+AGG 0.408238 4_2:+44018471 None:intergenic
GGAAACTTCCGGCAGGAGAC+TGG 0.408365 4_2:+44019000 None:intergenic
GGTTTCAACACAAGTTGCTT+TGG 0.408603 4_2:-44014654 Msa0601410:CDS
ACACGCACACCTGTGATATT+AGG 0.408715 4_2:+44019393 None:intergenic
TATTCAGAAGAATTGCATAT+TGG 0.410487 4_2:-44016830 Msa0601410:CDS
CCATCTCCTGATTCATCTCT+TGG 0.410884 4_2:+44018513 None:intergenic
TTCAAATCAGCATTTCCATT+TGG 0.412238 4_2:+44021083 None:intergenic
TTGCGAAGAAGAGCGTGAAT+TGG 0.414013 4_2:+44023778 None:intergenic
CTGCTTGAGTTGCAGAGCAT+TGG 0.414043 4_2:-44016571 Msa0601410:CDS
TCAGACTTCTCCCTCCCTAA+TGG 0.420494 4_2:+44018435 None:intergenic
TTTGGCACGGTAAAACCAAT+TGG 0.422554 4_2:+44013128 None:intergenic
TGAGAAAGCTCTATATGAAC+AGG 0.424531 4_2:-44016381 Msa0601410:intron
TGGTTGGTTTACCAAACAAT+TGG 0.425955 4_2:+44013330 None:intergenic
GTTGGGCTAGGGCTGCTTGT+TGG 0.426143 4_2:+44019089 None:intergenic
TCATCTTGCTCTGCTAAATC+AGG 0.426207 4_2:+44016431 None:intergenic
TGCAGATTGAAGTCAATTCC+TGG 0.426649 4_2:-44019453 Msa0601410:intron
TAAGACCAGGCCTTCCATTA+GGG 0.429753 4_2:-44018449 Msa0601410:CDS
CAAATCTAGCGGCAAACACT+GGG 0.430022 4_2:+44022660 None:intergenic
ATCAAGACCGTGATGTAACC+TGG 0.430063 4_2:-44013399 Msa0601410:three_prime_UTR
AGGGGAGTTAAAACACATAA+AGG 0.430416 4_2:-44022512 Msa0601410:CDS
TCAATGGGCCCAGGAGCCTC+AGG 0.430754 4_2:-44022532 Msa0601410:CDS
AGAAACTTGGACAAAATTGA+TGG 0.431873 4_2:-44016238 Msa0601410:CDS
ATTTGACCAACTTACCGAAA+TGG 0.432789 4_2:-44015985 Msa0601410:CDS
CTTGACGGGCCACAAGATCT+TGG 0.434263 4_2:-44013606 Msa0601410:CDS
AGGGTTCTGGGTGTTCCTCC+TGG 0.436963 4_2:-44022598 Msa0601410:CDS
TTGATAATAAGAAAGGGATC+TGG 0.437598 4_2:+44013227 None:intergenic
ACAAAGCACCGGAGTTTGGC+AGG 0.438117 4_2:-44016740 Msa0601410:CDS
TGGAGTAAAGTTAACAAAGA+TGG 0.439429 4_2:-44021851 Msa0601410:CDS
TTAACTCCCCTGAGGCTCCT+GGG 0.440825 4_2:+44022524 None:intergenic
TCCTGAACTGGCTTCAGTAT+AGG 0.441073 4_2:+44018405 None:intergenic
GGAGTAAAGTTAACAAAGAT+GGG 0.442026 4_2:-44021850 Msa0601410:CDS
AATTTGGTCTGGACTGATCC+CGG 0.449509 4_2:+44013931 None:intergenic
CCACCTACAGCCTCCGACTT+GGG 0.449664 4_2:+44017069 None:intergenic
AGCAAGGTGCCTCTCTTCAC+AGG 0.450356 4_2:-44019356 Msa0601410:CDS
TGTAAGCCATTTCGGTAAGT+TGG 0.450884 4_2:+44015979 None:intergenic
CCCACCTACAGCCTCCGACT+TGG 0.452188 4_2:+44017068 None:intergenic
CAGATGAGACCTGAACTTCA+AGG 0.452932 4_2:+44018799 None:intergenic
TTATCACTTGGCGCTGTCTA+CGG 0.453057 4_2:-44012993 Msa0601410:three_prime_UTR
AATGTTAAAGCTTCTTCTGT+TGG 0.453266 4_2:-44018753 Msa0601410:CDS
ATGGAGATTGATAATAAGAA+AGG 0.454695 4_2:+44013220 None:intergenic
TCCCTCCCTAATGGAAGGCC+TGG 0.457131 4_2:+44018444 None:intergenic
CTTCTTCTGTTGGCAACGAT+GGG 0.461409 4_2:-44018743 Msa0601410:CDS
TGACTATCAGCTTATGTCTC+TGG 0.461415 4_2:-44016605 Msa0601410:CDS
TACGAAAATACCAACTTGGT+TGG 0.462120 4_2:+44013314 None:intergenic
GGAGAGCTAAAGAGGGTTCT+GGG 0.462822 4_2:-44022610 Msa0601410:CDS
AATCTGATTCAGACACTTAG+TGG 0.463492 4_2:-44021251 Msa0601410:CDS
GGGCCCATTGATTTAGGATG+TGG 0.464432 4_2:+44022544 None:intergenic
GTTGTTATTGCAGCAAATAT+GGG 0.464646 4_2:-44018287 Msa0601410:intron
GTATCTCGGGCACCAAGAAC+GGG 0.464802 4_2:-44019053 Msa0601410:CDS
GAAAATATATCTAAATTGGA+TGG 0.467435 4_2:-44021937 Msa0601410:CDS
GTAGGAAACAGAGTTATAAC+TGG 0.467862 4_2:-44021134 Msa0601410:CDS
GAATGATTTATCAAGTGAAA+GGG 0.469063 4_2:-44021878 Msa0601410:CDS
TCACCACTACCTCCAAAATC+AGG 0.469491 4_2:+44018192 None:intergenic
GAAAACAAAATAAAAGAGAA+AGG 0.469508 4_2:-44018612 Msa0601410:CDS
CCTTTACTTGAGAAGTGTCC+TGG 0.471741 4_2:+44013700 None:intergenic
ATCATTTGAACATATTTCAC+TGG 0.472321 4_2:+44016681 None:intergenic
TCAAGAACATCAAATCTTGA+CGG 0.474162 4_2:-44014008 Msa0601410:CDS
CCATCAGGAGAAGGAAAACT+AGG 0.474711 4_2:+44016628 None:intergenic
GCAACAATGGCAGTAAAGAC+GGG 0.475117 4_2:-44013740 Msa0601410:CDS
TCAAATCTAGCGGCAAACAC+TGG 0.475528 4_2:+44022659 None:intergenic
ACTTCAAGGTTGCGTGAGGC+AGG 0.475634 4_2:+44018813 None:intergenic
AAAACAAAATAAAAGAGAAA+GGG 0.477037 4_2:-44018611 Msa0601410:CDS
GTCGTCAATGGTGTCGTCAA+TGG 0.477611 4_2:-44014035 Msa0601410:CDS
TCCCCTCATTCACGCGAGAA+TGG 0.477689 4_2:-44014539 Msa0601410:CDS
AACAATTGTTATCCCAGAAT+GGG 0.479250 4_2:-44014103 Msa0601410:CDS
AGTTCCACATCCTAAATCAA+TGG 0.479944 4_2:-44022548 Msa0601410:CDS
GGTATCTCGGGCACCAAGAA+CGG 0.480649 4_2:-44019054 Msa0601410:CDS
GCATTCCTAGGGCATGACTT+TGG 0.480760 4_2:+44013110 None:intergenic
ACCGAAAGACCGGGATAGAA+TGG 0.481320 4_2:-44016884 Msa0601410:CDS
TTGTAGCAAAAGGAAACAAC+AGG 0.481520 4_2:-44019311 Msa0601410:intron
AATGGAATCTGAAGTTGAAT+CGG 0.481565 4_2:-44016866 Msa0601410:CDS
GCTTCTTCTGTTGGCAACGA+TGG 0.482437 4_2:-44018744 Msa0601410:CDS
GAACAATTGTTATCCCAGAA+TGG 0.482965 4_2:-44014104 Msa0601410:CDS
AATCAGCATTTCCATTTGGA+AGG 0.485230 4_2:+44021087 None:intergenic
AGATGCATCATCCGAGCTGA+TGG 0.485334 4_2:+44017555 None:intergenic
AAACGAGCTACCCTTCCAAA+TGG 0.486000 4_2:-44021098 Msa0601410:CDS
ATTCAACACTCTACTATCTA+GGG 0.486211 4_2:-44023812 Msa0601410:five_prime_UTR
ACGTGTCTGTCCAGGGGTAT+CGG 0.487129 4_2:-44017795 Msa0601410:intron
TCACATGGATTCGGTGAACC+TGG 0.487381 4_2:-44013427 Msa0601410:three_prime_UTR
GTGTATCTGGTGAACTTGAC+GGG 0.488008 4_2:-44013620 Msa0601410:CDS
GATGCGATTTAATGATGCTC+AGG 0.488375 4_2:-44021060 Msa0601410:CDS
GGTCGTCCATTGGAATTTCA+AGG 0.489186 4_2:+44013529 None:intergenic
GCACCATTCTCGCGTGAATG+AGG 0.489512 4_2:+44014536 None:intergenic
CCAAATTCTAATTCCAGAGC+TGG 0.489918 4_2:-44013915 Msa0601410:CDS
TCTGGAATTAGAATTTGGTC+TGG 0.492984 4_2:+44013920 None:intergenic
CACCATTCTCGCGTGAATGA+GGG 0.494173 4_2:+44014537 None:intergenic
TCTACCCTGTGAACCTTGAG+TGG 0.494196 4_2:+44017113 None:intergenic
GCTTTGGCTGCTGATAGGGA+TGG 0.496134 4_2:-44018570 Msa0601410:CDS
TTGTTGATTCCAATAGATCC+AGG 0.496496 4_2:+44019435 None:intergenic
AAGGAGAATTCACATGGATT+CGG 0.497088 4_2:-44013436 Msa0601410:three_prime_UTR
TAAAACCACTCAAGGTTCAC+AGG 0.497688 4_2:-44017118 Msa0601410:CDS
TGTGCCCAAGAAAATCAAAC+GGG 0.498559 4_2:+44022812 None:intergenic
TGCTGGACATGATAGATTCA+TGG 0.498631 4_2:-44013823 Msa0601410:CDS
CCAGGACACTTCTCAAGTAA+AGG 0.499269 4_2:-44013700 Msa0601410:CDS
TTACCAACCTGGGAAACTTC+CGG 0.499283 4_2:+44018989 None:intergenic
TCAAAGGAAAGAGAAGTGAG+AGG 0.499981 4_2:-44013968 Msa0601410:CDS
GATCATCACAGACCCATTCT+GGG 0.500440 4_2:+44014091 None:intergenic
GGAATGATTTATCAAGTGAA+AGG 0.502199 4_2:-44021879 Msa0601410:CDS
TCTCCTGCCGGAAGTTTCCC+AGG 0.502332 4_2:-44018996 Msa0601410:intron
GGTGTATCTGGTGAACTTGA+CGG 0.502507 4_2:-44013621 Msa0601410:CDS
CTTGGAGTGGAGAAATTTGG+TGG 0.502909 4_2:-44013372 Msa0601410:three_prime_UTR
TGGTCTTTGTCCACCCCACT+GGG 0.503048 4_2:+44018875 None:intergenic
GACCAGAGCGTTGTAGCAAA+AGG 0.503257 4_2:-44019321 Msa0601410:CDS
TATGAGACATCTCTATCAAA+AGG 0.503974 4_2:-44013455 Msa0601410:three_prime_UTR
AATGGCTTACAGAAAGAGAT+TGG 0.504047 4_2:-44015967 Msa0601410:intron
CCGCTAGATTTGATCACTGT+AGG 0.504510 4_2:-44022649 Msa0601410:CDS
TCCGGTGCTTTGTAAAGGAC+TGG 0.506096 4_2:+44016750 None:intergenic
GTCAGCTGGATTATGCAGAC+AGG 0.507203 4_2:-44014166 Msa0601410:CDS
AATATACGGGAGAGCTAAAG+AGG 0.510045 4_2:-44022618 Msa0601410:CDS
TTAAACGGCAGCAGCACAAG+TGG 0.511854 4_2:-44022712 Msa0601410:CDS
GTTCCACATCCTAAATCAAT+GGG 0.512262 4_2:-44022547 Msa0601410:CDS
CAAACTCCGGTGCTTTGTAA+AGG 0.513811 4_2:+44016745 None:intergenic
AAAATGCCAAGAGATGAATC+AGG 0.515846 4_2:-44018519 Msa0601410:CDS
ACGCGAGAATGGTGCACGAC+AGG 0.516083 4_2:-44014528 Msa0601410:CDS
AGTTCTGTGAGTAACTTAAA+CGG 0.516809 4_2:-44022727 Msa0601410:CDS
TTGTGCCCAAGAAAATCAAA+CGG 0.518009 4_2:+44022811 None:intergenic
ATAAGCTGATAGTCACCATC+AGG 0.518601 4_2:+44016613 None:intergenic
TTCATCTCCCTGCCAAACTC+CGG 0.519737 4_2:+44016732 None:intergenic
GAATGGGTCTGTGATGATCA+AGG 0.520637 4_2:-44014087 Msa0601410:CDS
TGGAAGGAAGAAGAGAAACT+TGG 0.521516 4_2:-44016251 Msa0601410:CDS
AGGAGGTCTGTCGGAACAGT+AGG 0.522429 4_2:-44021152 Msa0601410:CDS
TTTCTACGAAAATACCAACT+TGG 0.522532 4_2:+44013310 None:intergenic
CTGGTCAATGGTGTCGTCAA+TGG 0.523023 4_2:-44014047 Msa0601410:CDS
AGCAACAATGGCAGTAAAGA+CGG 0.523545 4_2:-44013741 Msa0601410:CDS
AATTCCGATAGGTCGTCCAT+TGG 0.524861 4_2:+44013519 None:intergenic
TACCAACGTATCATGATCAA+TGG 0.525283 4_2:+44017352 None:intergenic
TGGAGATTGATAATAAGAAA+GGG 0.527400 4_2:+44013221 None:intergenic
TCACTTTCAGATAATCCAAA+GGG 0.531324 4_2:+44018651 None:intergenic
ATTGATGGAGCTATTCTCAC+AGG 0.534272 4_2:-44016223 Msa0601410:CDS
TGATAGATTCATGGAAGCAA+AGG 0.538010 4_2:-44013814 Msa0601410:CDS
GGATTATGCAGACAGGGGAC+TGG 0.538754 4_2:-44014159 Msa0601410:CDS
TTATCTGAAAGTGAAGAATC+TGG 0.538780 4_2:-44018642 Msa0601410:CDS
AGTAAAGGAATCCACTGACT+TGG 0.539185 4_2:-44013685 Msa0601410:CDS
AATTCCAATGGACGACCTAT+CGG 0.539844 4_2:-44013523 Msa0601410:CDS
GGGGAAGAAGAGGGAAATGC+TGG 0.540750 4_2:-44014066 Msa0601410:CDS
ATTTGGTCTGGACTGATCCC+GGG 0.540829 4_2:+44013932 None:intergenic
AGCGGCAAACACTGGGGCAA+AGG 0.542181 4_2:+44022667 None:intergenic
ATCTGAAGTTGAATCGGAGG+TGG 0.543068 4_2:-44016860 Msa0601410:CDS
AGTTATAATTCAAGATATTG+TGG 0.543233 4_2:-44016408 Msa0601410:CDS
TTCTTCCTCATTTGTAACAG+AGG 0.543587 4_2:+44018543 None:intergenic
TGTAGAAGATATGAAGAAGC+TGG 0.544090 4_2:-44014605 Msa0601410:CDS
TACCTCGGTGGCAGACATGC+GGG 0.544264 4_2:-44021743 Msa0601410:intron
ATTGAACTTAAATCAGGTAG+TGG 0.545094 4_2:+44013654 None:intergenic
ATAAATAATAAAACCACTCA+AGG 0.545402 4_2:-44017126 Msa0601410:CDS
CCCAAGTCGGAGGCTGTAGG+TGG 0.546618 4_2:-44017069 Msa0601410:CDS
AGATTACCTGCTGGAGGTGA+GGG 0.547271 4_2:-44021197 Msa0601410:CDS
CACTTGGCGCTGTCTACGGT+GGG 0.547905 4_2:-44012989 Msa0601410:three_prime_UTR
AAGAGGGAAATGCTGGTCAA+TGG 0.549009 4_2:-44014059 Msa0601410:CDS
GAAAGTAGGTCTGCTTCTAT+CGG 0.550860 4_2:-44021305 Msa0601410:CDS
CTTCAGATTCCATTCTATCC+CGG 0.551444 4_2:+44016875 None:intergenic
AATATGCTTATGTGAAGGAA+TGG 0.551499 4_2:-44013495 Msa0601410:exon
AAAACATGCAGATTACCTGC+TGG 0.551629 4_2:-44021206 Msa0601410:CDS
GACAGCGCCAAGTGATAACA+TGG 0.551759 4_2:+44012998 None:intergenic
CCTGCTCCCAGGAGGAAAGT+AGG 0.551836 4_2:-44021319 Msa0601410:intron
TGATGATCAAGGGGAAGAAG+AGG 0.553622 4_2:-44014076 Msa0601410:CDS
CAGATTACCTGCTGGAGGTG+AGG 0.554337 4_2:-44021198 Msa0601410:CDS
GATGTGGAACTCCAAAAGAA+TGG 0.555711 4_2:+44022560 None:intergenic
GAAGTTCAGGTCTCATCTGA+AGG 0.556992 4_2:-44018795 Msa0601410:CDS
TTCACTTTCAGATAATCCAA+AGG 0.557178 4_2:+44018650 None:intergenic
CTTGTTTCTCAGCATTAGGA+AGG 0.558288 4_2:-44022767 Msa0601410:five_prime_UTR
GTTTGGTAAACCAACCAAGT+TGG 0.558354 4_2:-44013324 Msa0601410:three_prime_UTR
TGAGAAATATGATAGTCAGC+TGG 0.558413 4_2:-44014180 Msa0601410:CDS
TATGGGCCTTGAAATTCCAA+TGG 0.559789 4_2:-44013535 Msa0601410:CDS
CTCAGCATTAGGAAGGTCAA+CGG 0.562096 4_2:-44022760 Msa0601410:five_prime_UTR
AAAATATATCTAAATTGGAT+GGG 0.562372 4_2:-44021936 Msa0601410:CDS
AATGATTTATCAAGTGAAAG+GGG 0.562636 4_2:-44021877 Msa0601410:CDS
CAAAGGAAAGAGAAGTGAGA+GGG 0.563052 4_2:-44013967 Msa0601410:CDS
TCTAATCCCTCACCTCCAGC+AGG 0.563314 4_2:+44021191 None:intergenic
TATTGGAATCAACAAATCTG+AGG 0.563330 4_2:-44019427 Msa0601410:CDS
ATAACAATTGTTCTGATGAG+TGG 0.563991 4_2:+44014114 None:intergenic
AGAGGGATAGAAATCAGACC+CGG 0.567172 4_2:-44013950 Msa0601410:CDS
GAAAGTGAAGAATCTGGTGC+TGG 0.567394 4_2:-44018636 Msa0601410:CDS
GGCAAACACTGGGGCAAAGG+TGG 0.567582 4_2:+44022670 None:intergenic
TGTTTGACTAATAGAATGGA+AGG 0.570521 4_2:-44016267 Msa0601410:intron
TCCAGTCCTTTACAAAGCAC+CGG 0.570568 4_2:-44016751 Msa0601410:CDS
GCTGTTCCTATTGGAGTCAA+AGG 0.570606 4_2:-44013984 Msa0601410:CDS
TCACTTGGCGCTGTCTACGG+TGG 0.570779 4_2:-44012990 Msa0601410:three_prime_UTR
TCTAACATCCAGTCTCCTGC+CGG 0.571289 4_2:-44019008 Msa0601410:CDS
CATCCTAAATCAATGGGCCC+AGG 0.571612 4_2:-44022541 Msa0601410:CDS
AAACAAAATAAAAGAGAAAG+GGG 0.571656 4_2:-44018610 Msa0601410:CDS
TCACGGTCTTGATGCCCACC+AGG 0.575882 4_2:+44013409 None:intergenic
ACAGCAGATGCTCACTGAGA+AGG 0.576488 4_2:-44021279 Msa0601410:CDS
ATCAGCATTTCCATTTGGAA+GGG 0.577910 4_2:+44021088 None:intergenic
GATCTCCTCTGTTACAAATG+AGG 0.578706 4_2:-44018548 Msa0601410:CDS
TTCTCCACTCCAAGAAACCC+AGG 0.579393 4_2:+44013381 None:intergenic
AGCAGCCAAAGCAAAGTCAC+TGG 0.579929 4_2:+44018581 None:intergenic
TGAAGCCAGTTCAGGAAACA+AGG 0.580024 4_2:-44018398 Msa0601410:CDS
AGCCAAGAACCAAGATCTTG+TGG 0.581400 4_2:+44013597 None:intergenic
ATGCAGAGACAAGGAAGACC+TGG 0.582217 4_2:-44018489 Msa0601410:CDS
GGCATCATTATCTGGTAACC+AGG 0.582374 4_2:-44013718 Msa0601410:CDS
ATATACATCTTTGTATCTGA+CGG 0.582944 4_2:+44012926 None:intergenic
CAAAGCACCGGAGTTTGGCA+GGG 0.584766 4_2:-44016739 Msa0601410:CDS
ATGCGATTTAATGATGCTCA+GGG 0.585167 4_2:-44021059 Msa0601410:CDS
ATCTGATTCAGACACTTAGT+GGG 0.586489 4_2:-44021250 Msa0601410:CDS
TCTTCAGAGCCTAATATCAC+AGG 0.587658 4_2:-44019402 Msa0601410:CDS
CCGTGCCAAAGTCATGCCCT+AGG 0.588475 4_2:-44013115 Msa0601410:three_prime_UTR
AATGGGTCTGTGATGATCAA+GGG 0.589407 4_2:-44014086 Msa0601410:CDS
GTAACCTGGGTTTCTTGGAG+TGG 0.590738 4_2:-44013385 Msa0601410:three_prime_UTR
TTATGATTCTAGTCTATCTG+TGG 0.592390 4_2:-44013772 Msa0601410:CDS
CACAAGTGGGATAACTTCAT+CGG 0.593548 4_2:-44022698 Msa0601410:CDS
TTGTCTACACTGCTAGCTAG+TGG 0.593633 4_2:+44018717 None:intergenic
CAGAGTTATAACTGGTGAGA+GGG 0.593853 4_2:-44021126 Msa0601410:CDS
ACCATTCTCGCGTGAATGAG+GGG 0.594436 4_2:+44014538 None:intergenic
TATACATCCAATGACCCAGT+GGG 0.594765 4_2:-44018889 Msa0601410:CDS
GTAGGGAAGCGGCTGAACAT+TGG 0.595220 4_2:-44018219 Msa0601410:CDS
GAACCCAAGTCGGAGGCTGT+AGG 0.597354 4_2:-44017072 Msa0601410:CDS
GTAAAGGACTGGATGTGTCT+GGG 0.597414 4_2:+44016761 None:intergenic
TGTCTACACTGCTAGCTAGT+GGG 0.599619 4_2:+44018718 None:intergenic
GTGGCTAATGCAAGCAACAA+TGG 0.600153 4_2:-44013753 Msa0601410:CDS
TGGCTGAACTTTGATGACGA+TGG 0.600447 4_2:-44013579 Msa0601410:CDS
AATTAGAGCAAACACTCAAG+AGG 0.600835 4_2:-44019114 Msa0601410:intron
CTGAGAAACAAGTCAGCAGA+AGG 0.601009 4_2:+44022778 None:intergenic
GATGCATCATCCGAGCTGAT+GGG 0.601367 4_2:+44017556 None:intergenic
CCGACTTGGGTTCATCAAAG+TGG 0.601580 4_2:+44017082 None:intergenic
TAAACTCAAAGAAGCGACAA+AGG 0.603321 4_2:-44021900 Msa0601410:CDS
ATTGGAATCAACAAATCTGA+GGG 0.606976 4_2:-44019426 Msa0601410:CDS
CCAAGAGATGAATCAGGAGA+TGG 0.607486 4_2:-44018513 Msa0601410:CDS
CAATGGGCCCAGGAGCCTCA+GGG 0.607986 4_2:-44022531 Msa0601410:CDS
AATTGAATATGCTTATGTGA+AGG 0.608801 4_2:-44013500 Msa0601410:exon
TGATAGTCACCATCAGGAGA+AGG 0.609762 4_2:+44016619 None:intergenic
TCCAAAAGAATGGTCTTCTG+AGG 0.611438 4_2:+44022570 None:intergenic
GACCAGGCCTTCCATTAGGG+AGG 0.614364 4_2:-44018446 Msa0601410:CDS
ACTTCTCCCTCCCTAATGGA+AGG 0.615017 4_2:+44018439 None:intergenic
ATAAAGAAGAGGAGGTCTGT+CGG 0.616351 4_2:-44021161 Msa0601410:CDS
GATGATCAAGGGGAAGAAGA+GGG 0.617206 4_2:-44014075 Msa0601410:CDS
CAGATGCTCACTGAGAAGGA+TGG 0.622542 4_2:-44021275 Msa0601410:CDS
TATTCTCACAGGGAGGGACA+TGG 0.624358 4_2:-44016212 Msa0601410:CDS
CAACCTGGGAAACTTCCGGC+AGG 0.625362 4_2:+44018993 None:intergenic
ATGGATTCGGTGAACCTGGT+GGG 0.626783 4_2:-44013423 Msa0601410:three_prime_UTR
TGGCAAATTCTCCAAGTCAG+TGG 0.626827 4_2:+44013674 None:intergenic
TAAGCATATTCAATTCCGAT+AGG 0.628658 4_2:+44013508 None:intergenic
ATGGGTCTGTGATGATCAAG+GGG 0.631928 4_2:-44014085 Msa0601410:CDS
GCGAAGAAGAGCGTGAATTG+GGG 0.634006 4_2:+44023780 None:intergenic
ACCAGGCCTTCCATTAGGGA+GGG 0.634224 4_2:-44018445 Msa0601410:CDS
TGCCATTGATCATGATACGT+TGG 0.634680 4_2:-44017354 Msa0601410:intron
ATGATTTATCAAGTGAAAGG+GGG 0.635832 4_2:-44021876 Msa0601410:CDS
ACAGAGTTATAACTGGTGAG+AGG 0.636696 4_2:-44021127 Msa0601410:CDS
CCACTTTGATGAACCCAAGT+CGG 0.638705 4_2:-44017082 Msa0601410:CDS
CTGAACTTCAAGGTTGCGTG+AGG 0.639067 4_2:+44018809 None:intergenic
CATCCAATGACCCAGTGGGG+TGG 0.639332 4_2:-44018885 Msa0601410:CDS
AAAACCACTCAAGGTTCACA+GGG 0.640738 4_2:-44017117 Msa0601410:CDS
CATGGATTCGGTGAACCTGG+TGG 0.641228 4_2:-44013424 Msa0601410:three_prime_UTR
AGTCGGAGGCTGTAGGTGGG+AGG 0.641838 4_2:-44017065 Msa0601410:CDS
CCTAGGGCATGACTTTGGCA+CGG 0.641897 4_2:+44013115 None:intergenic
GTACCTCGGTGGCAGACATG+CGG 0.643774 4_2:-44021744 Msa0601410:CDS
TCAGCTGGATTATGCAGACA+GGG 0.644809 4_2:-44014165 Msa0601410:CDS
GGAATCTGAAGTTGAATCGG+AGG 0.644911 4_2:-44016863 Msa0601410:CDS
GCAAGGTGCCTCTCTTCACA+GGG 0.645965 4_2:-44019355 Msa0601410:CDS
TCAAGACCGTGATGTAACCT+GGG 0.646381 4_2:-44013398 Msa0601410:three_prime_UTR
TATCAAAAGGAGAATTCACA+TGG 0.646510 4_2:-44013442 Msa0601410:three_prime_UTR
AATTTATCGTCAATAAGACC+AGG 0.647670 4_2:-44018462 Msa0601410:CDS
AATGGGCCCAGGAGCCTCAG+GGG 0.648009 4_2:-44022530 Msa0601410:CDS
TGGAGCTATTCTCACAGGGA+GGG 0.652213 4_2:-44016218 Msa0601410:CDS
AAGAAGTCTTTGGAATAATG+GGG 0.653326 4_2:+44017029 None:intergenic
CTTTGATGAACCCAAGTCGG+AGG 0.654764 4_2:-44017079 Msa0601410:CDS
TAAACGGCAGCAGCACAAGT+GGG 0.661699 4_2:-44022711 Msa0601410:CDS
CAACAATGGCAGTAAAGACG+GGG 0.663869 4_2:-44013739 Msa0601410:CDS
CCAAGTCGGAGGCTGTAGGT+GGG 0.664282 4_2:-44017068 Msa0601410:CDS
GGAGATGGTATGCAGAGACA+AGG 0.670588 4_2:-44018498 Msa0601410:CDS
AGAGACAAGGAAGACCTGGA+AGG 0.675333 4_2:-44018485 Msa0601410:CDS
ATGGAGCTATTCTCACAGGG+AGG 0.678973 4_2:-44016219 Msa0601410:CDS
GGTGTGAGTGATATCAGAGA+TGG 0.681108 4_2:+44016702 None:intergenic
TCTTCTGAGGTGTTTCCAGG+AGG 0.682843 4_2:+44022583 None:intergenic
GCTAGTGATGATTCTCACTG+TGG 0.685426 4_2:-44016931 Msa0601410:CDS
ACATGCAGATTACCTGCTGG+AGG 0.689653 4_2:-44021203 Msa0601410:CDS
TTGATGGAGCTATTCTCACA+GGG 0.690493 4_2:-44016222 Msa0601410:CDS
TCTGATTCAGACACTTAGTG+GGG 0.693406 4_2:-44021249 Msa0601410:CDS
CTGATTCAGACACTTAGTGG+GGG 0.696973 4_2:-44021248 Msa0601410:CDS
CTATACATCCAATGACCCAG+TGG 0.697474 4_2:-44018890 Msa0601410:CDS
ATATACGGGAGAGCTAAAGA+GGG 0.697624 4_2:-44022617 Msa0601410:CDS
GAGGGATAGAAATCAGACCC+GGG 0.700022 4_2:-44013949 Msa0601410:CDS
TAAATTGGATGGGTATACGG+AGG 0.700414 4_2:-44021926 Msa0601410:CDS
GTGATGCTTACAGATGAGCA+AGG 0.700918 4_2:-44019372 Msa0601410:CDS
GAACAAGCGAATTCGTACCT+CGG 0.701214 4_2:-44021758 Msa0601410:CDS
CCTACAGTGATCAAATCTAG+CGG 0.703492 4_2:+44022649 None:intergenic
TGTAGGTGGGAGGAATGACA+AGG 0.704711 4_2:-44017055 Msa0601410:CDS
TACCCGCATGTCTGCCACCG+AGG 0.705277 4_2:+44021741 None:intergenic
CAAGCGAATTCGTACCTCGG+TGG 0.708557 4_2:-44021755 Msa0601410:CDS
AAGAAACCCAGGTTACATCA+CGG 0.709116 4_2:+44013392 None:intergenic
CAGCTGGATTATGCAGACAG+GGG 0.722689 4_2:-44014164 Msa0601410:CDS
AAATCTAGCGGCAAACACTG+GGG 0.728638 4_2:+44022661 None:intergenic
ACAGCGCCAAGTGATAACAT+GGG 0.731333 4_2:+44012999 None:intergenic
ATACATCCAATGACCCAGTG+GGG 0.772374 4_2:-44018888 Msa0601410:CDS
GTGCCCAAGAAAATCAAACG+GGG 0.777553 4_2:+44022813 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTCGTTTTTAATTCAAT+AGG - chr4_2:44013044-44013063 Msa0601410:three_prime_UTR 15.0%
!! TGTAGGAAATAAAAAATATA+CGG - chr4_2:44014091-44014110 Msa0601410:CDS 15.0%
!! TGCCATAAAAAATTTATATT+CGG - chr4_2:44014401-44014420 Msa0601410:intron 15.0%
!!! AAATGTTCAAATATTTTCAT+AGG - chr4_2:44014493-44014512 Msa0601410:CDS 15.0%
!! AAAATATATCTAAATTGGAT+GGG - chr4_2:44014787-44014806 Msa0601410:intron 15.0%
!! AAAATTTATTCCATATTGTA+GGG + chr4_2:44015083-44015102 None:intergenic 15.0%
!! TTTATTATTTGAATTACACA+TGG + chr4_2:44016901-44016920 None:intergenic 15.0%
!!! TTTTACTAATAATCTTTTTG+TGG - chr4_2:44017247-44017266 Msa0601410:intron 15.0%
!! AAAACAAAATAAAAGAGAAA+GGG - chr4_2:44018112-44018131 Msa0601410:intron 15.0%
!!! CTGTTTTTTTTTTTAAATGT+CGG + chr4_2:44020799-44020818 None:intergenic 15.0%
!! ATTTAAAAAAAAAAACAGCA+TGG - chr4_2:44020801-44020820 Msa0601410:intron 15.0%
!!! TTTAAGTATCGTTTAAAATT+AGG + chr4_2:44021290-44021309 None:intergenic 15.0%
!!! AAAAAAACATGAAATTTTCA+AGG + chr4_2:44021456-44021475 None:intergenic 15.0%
!! CAATATAATTTCTAAATAAG+AGG + chr4_2:44021550-44021569 None:intergenic 15.0%
!!! CTCTTATTTAGAAATTATAT+TGG - chr4_2:44021548-44021567 Msa0601410:intron 15.0%
!! AAAAAAAAAAAATACTGTTC+CGG + chr4_2:44021780-44021799 None:intergenic 15.0%
!! AACTAAAAAAAGTAAGCAAT+GGG + chr4_2:44013006-44013025 None:intergenic 20.0%
!! ACTTACTTAAACTACTAAAT+CGG + chr4_2:44013406-44013425 None:intergenic 20.0%
!! AAAAATGTGGTTAATTTAGT+TGG - chr4_2:44013664-44013683 Msa0601410:CDS 20.0%
!! AAAATGTGGTTAATTTAGTT+GGG - chr4_2:44013665-44013684 Msa0601410:CDS 20.0%
!! AGTTAATTTAGTTGAGTATA+TGG + chr4_2:44013776-44013795 None:intergenic 20.0%
!!! TTTAACATGTGATTTACTTT+TGG - chr4_2:44013874-44013893 Msa0601410:CDS 20.0%
!! GTAGGAAATAAAAAATATAC+GGG - chr4_2:44014092-44014111 Msa0601410:CDS 20.0%
!!! ATTCTATTTGAAATGATGAA+TGG - chr4_2:44014321-44014340 Msa0601410:intron 20.0%
!! GCCATAAAAAATTTATATTC+GGG - chr4_2:44014402-44014421 Msa0601410:intron 20.0%
!! CCATAAAAAATTTATATTCG+GGG - chr4_2:44014403-44014422 Msa0601410:intron 20.0%
!! CATAAAAAATTTATATTCGG+GGG - chr4_2:44014404-44014423 Msa0601410:intron 20.0%
!! ATAAAAAATTTATATTCGGG+GGG - chr4_2:44014405-44014424 Msa0601410:intron 20.0%
!! ACACTGTATCATAAAATAAT+AGG + chr4_2:44014696-44014715 None:intergenic 20.0%
!! TGAGGAAAATATATCTAAAT+TGG - chr4_2:44014782-44014801 Msa0601410:intron 20.0%
!! GAAAATATATCTAAATTGGA+TGG - chr4_2:44014786-44014805 Msa0601410:intron 20.0%
!!! ATTTTAAGCTATTGTTACTA+AGG - chr4_2:44015006-44015025 Msa0601410:intron 20.0%
!! CAAAATTTATTCCATATTGT+AGG + chr4_2:44015084-44015103 None:intergenic 20.0%
!! AGTCATATCTAACTTAAAAT+CGG - chr4_2:44015261-44015280 Msa0601410:intron 20.0%
!! TCATGAAAAAAGAATGAAAA+TGG + chr4_2:44015370-44015389 None:intergenic 20.0%
!! TAGATCAAAAAATAAAGAAG+AGG - chr4_2:44015551-44015570 Msa0601410:intron 20.0%
!!! CTGTAATATTGAATTCTTTT+AGG - chr4_2:44016970-44016989 Msa0601410:CDS 20.0%
!! TATTTAATCCTGATTACAAT+AGG + chr4_2:44017042-44017061 None:intergenic 20.0%
!! AAACAAACAATATAATTCAG+AGG + chr4_2:44017083-44017102 None:intergenic 20.0%
!!! ATACCTTGTTTTTAATTGTT+GGG + chr4_2:44017654-44017673 None:intergenic 20.0%
!! GAAAACAAAATAAAAGAGAA+AGG - chr4_2:44018111-44018130 Msa0601410:intron 20.0%
!! AAACAAAATAAAAGAGAAAG+GGG - chr4_2:44018113-44018132 Msa0601410:intron 20.0%
!!! TACGTTTTATTCTTATCATT+AGG + chr4_2:44018351-44018370 None:intergenic 20.0%
!! AAAAACAAGATGAAAGATAT+AGG + chr4_2:44019422-44019441 None:intergenic 20.0%
!! ATAAATAATAAAACCACTCA+AGG - chr4_2:44019597-44019616 Msa0601410:intron 20.0%
!! AAACTAGGATTATATAATTC+AGG + chr4_2:44020083-44020102 None:intergenic 20.0%
!!! GTAGGGATTTATTTTATATA+TGG - chr4_2:44020194-44020213 Msa0601410:intron 20.0%
!! AGTTATAATTCAAGATATTG+TGG - chr4_2:44020315-44020334 Msa0601410:intron 20.0%
!! TAAATGTGGTTAATTTAACA+AGG + chr4_2:44020387-44020406 None:intergenic 20.0%
!! TATTAGTCAAACAAAATAAC+GGG + chr4_2:44020449-44020468 None:intergenic 20.0%
!! CTATTAGTCAAACAAAATAA+CGG + chr4_2:44020450-44020469 None:intergenic 20.0%
!!! ATTTTGTTTGACTAATAGAA+TGG - chr4_2:44020452-44020471 Msa0601410:intron 20.0%
!! ACATAATAAAAGATCACAAA+GGG + chr4_2:44020580-44020599 None:intergenic 20.0%
!! AACATAATAAAAGATCACAA+AGG + chr4_2:44020581-44020600 None:intergenic 20.0%
!!! TTTTTTTTAAATGTCGGTAA+AGG + chr4_2:44020793-44020812 None:intergenic 20.0%
!! TACAAGTAAAAGAAATGATA+TGG + chr4_2:44021040-44021059 None:intergenic 20.0%
!! TTTAAAAAACTGAAACGAAT+GGG - chr4_2:44021510-44021529 Msa0601410:intron 20.0%
!! GGTAAAATATTGTGTAATTT+AGG - chr4_2:44021635-44021654 Msa0601410:intron 20.0%
!! ATCAATCTCCATAATTTAAT+TGG - chr4_2:44023514-44023533 Msa0601410:intron 20.0%
!! CAGTAAAACCAATTAAATTA+TGG + chr4_2:44023525-44023544 None:intergenic 20.0%
!! ATGTCATTCATTTAGTTAAA+AGG - chr4_2:44023679-44023698 Msa0601410:intron 20.0%
! CAACTAAAAAAAGTAAGCAA+TGG + chr4_2:44013007-44013026 None:intergenic 25.0%
! CCATTTCCTTAAATTAAAAC+CGG + chr4_2:44013216-44013235 None:intergenic 25.0%
! TCTGTTCTTTATCAATTGTT+TGG - chr4_2:44013467-44013486 Msa0601410:three_prime_UTR 25.0%
!!! CCCCGAATATAAATTTTTTA+TGG + chr4_2:44014406-44014425 None:intergenic 25.0%
!! TACAGTGTATTCATTCATTT+TGG - chr4_2:44014708-44014727 Msa0601410:intron 25.0%
! GAATGATTTATCAAGTGAAA+GGG - chr4_2:44014845-44014864 Msa0601410:intron 25.0%
! AATGATTTATCAAGTGAAAG+GGG - chr4_2:44014846-44014865 Msa0601410:intron 25.0%
! TTGGAGTCATATTATCATTT+GGG + chr4_2:44014917-44014936 None:intergenic 25.0%
! CAACTTAATATATAGCATCT+TGG + chr4_2:44015054-44015073 None:intergenic 25.0%
!! CTGATGTTTCAACATATTTT+GGG - chr4_2:44015134-44015153 Msa0601410:intron 25.0%
! ATCAAAAAATAAAGAAGAGG+AGG - chr4_2:44015554-44015573 Msa0601410:intron 25.0%
! AATTTAGATGAAGAATGTGT+TGG - chr4_2:44015745-44015764 Msa0601410:intron 25.0%
! TGTCACAATATTGATACAAA+TGG - chr4_2:44015872-44015891 Msa0601410:intron 25.0%
!! TATTGATACAAATGGTGTTA+TGG - chr4_2:44015880-44015899 Msa0601410:intron 25.0%
!! AATTGAATAGAAGTATAGAC+TGG - chr4_2:44016038-44016057 Msa0601410:intron 25.0%
!! ATTGAATAGAAGTATAGACT+GGG - chr4_2:44016039-44016058 Msa0601410:intron 25.0%
!! CAAAAATCAGAGCTTTTATT+TGG - chr4_2:44016087-44016106 Msa0601410:intron 25.0%
!! GTTTGGTAGAAATTGATTTA+GGG - chr4_2:44016541-44016560 Msa0601410:intron 25.0%
! AAAGTTCTTGGAAAATAGAA+AGG - chr4_2:44016610-44016629 Msa0601410:CDS 25.0%
!! CATGAGTAATTTTCATAGTA+TGG + chr4_2:44016747-44016766 None:intergenic 25.0%
! TTATTTGAATTACACATGGA+GGG + chr4_2:44016897-44016916 None:intergenic 25.0%
! ATTATTTGAATTACACATGG+AGG + chr4_2:44016898-44016917 None:intergenic 25.0%
! TTAACTAACCTATTGTAATC+AGG - chr4_2:44017031-44017050 Msa0601410:CDS 25.0%
! AAAGAGGTTAATAAATAACC+GGG + chr4_2:44017130-44017149 None:intergenic 25.0%
! CAAAGAGGTTAATAAATAAC+CGG + chr4_2:44017131-44017150 None:intergenic 25.0%
! AATAATTATGTCAGACCATT+CGG + chr4_2:44017200-44017219 None:intergenic 25.0%
! AATTGACTGGTAAAAAAACT+AGG + chr4_2:44017483-44017502 None:intergenic 25.0%
! CAACATATACGAATGTAAAT+AGG + chr4_2:44017553-44017572 None:intergenic 25.0%
!!! GATACCTTGTTTTTAATTGT+TGG + chr4_2:44017655-44017674 None:intergenic 25.0%
!! CAATTAAAAACAAGGTATCT+CGG - chr4_2:44017656-44017675 Msa0601410:intron 25.0%
!! AATTAAAAACAAGGTATCTC+GGG - chr4_2:44017657-44017676 Msa0601410:intron 25.0%
! TAAAAGCTTTCAATATCTGT+AGG - chr4_2:44017805-44017824 Msa0601410:intron 25.0%
! ATGAAGAAAACCCAATTTAT+CGG + chr4_2:44018812-44018831 None:intergenic 25.0%
! ATCTTGAAATAAGAGTAGAA+TGG + chr4_2:44019021-44019040 None:intergenic 25.0%
! TAACTTCAAATTTCCAGAAA+AGG + chr4_2:44019238-44019257 None:intergenic 25.0%
! TTTCAGACAAGGAAATTTAA+TGG + chr4_2:44019501-44019520 None:intergenic 25.0%
!! TTTCCTTGTCTGAAATATAA+CGG - chr4_2:44019506-44019525 Msa0601410:intron 25.0%
!!! AGCAAATTTTTATTTCCTCA+GGG - chr4_2:44019567-44019586 Msa0601410:intron 25.0%
!!! AAAGAAGTCTTTGGAATAAT+GGG + chr4_2:44019698-44019717 None:intergenic 25.0%
! ATATGCAATTCTTCTGAATA+TGG + chr4_2:44019893-44019912 None:intergenic 25.0%
! TATTCAGAAGAATTGCATAT+TGG - chr4_2:44019893-44019912 Msa0601410:intron 25.0%
! ATCATTTGAACATATTTCAC+TGG + chr4_2:44020045-44020064 None:intergenic 25.0%
! TGGTTTATATCCAGAAATAA+TGG - chr4_2:44020172-44020191 Msa0601410:intron 25.0%
! TTATATCCAGAAATAATGGT+AGG - chr4_2:44020176-44020195 Msa0601410:intron 25.0%
! TATATCCAGAAATAATGGTA+GGG - chr4_2:44020177-44020196 Msa0601410:intron 25.0%
! ATATGGAATTACAAATGTCA+CGG - chr4_2:44020211-44020230 Msa0601410:intron 25.0%
! TACCAGAAAATGAAGAAATT+AGG + chr4_2:44020613-44020632 None:intergenic 25.0%
! TGCTTAAATAGAATCTTTGT+TGG - chr4_2:44021161-44021180 Msa0601410:CDS 25.0%
! GCTTAAATAGAATCTTTGTT+GGG - chr4_2:44021162-44021181 Msa0601410:CDS 25.0%
! AAAATCTCTACACTGAAATT+AGG + chr4_2:44021213-44021232 None:intergenic 25.0%
! GTTTAAAAAACTGAAACGAA+TGG - chr4_2:44021509-44021528 Msa0601410:intron 25.0%
! ATGATCGAATAAGGATTATT+GGG + chr4_2:44021836-44021855 None:intergenic 25.0%
! TATGATCGAATAAGGATTAT+TGG + chr4_2:44021837-44021856 None:intergenic 25.0%
! ATAGTGAATATGATCGAATA+AGG + chr4_2:44021845-44021864 None:intergenic 25.0%
!! TCACTATATTTTGTGTGATT+AGG - chr4_2:44021858-44021877 Msa0601410:CDS 25.0%
!! CACTATATTTTGTGTGATTA+GGG - chr4_2:44021859-44021878 Msa0601410:CDS 25.0%
!!! ATTTTTTCTGTTGAAGAATG+AGG - chr4_2:44021955-44021974 Msa0601410:CDS 25.0%
! AAATTTGAGTAGAAAACACA+TGG + chr4_2:44022002-44022021 None:intergenic 25.0%
!! TGTGTTTTCTACTCAAATTT+TGG - chr4_2:44022002-44022021 Msa0601410:intron 25.0%
!! TTTTTGAATTTCTGCTTTCA+CGG + chr4_2:44022036-44022055 None:intergenic 25.0%
!!! AACATTATATTTTGGAGAGT+CGG + chr4_2:44022163-44022182 None:intergenic 25.0%
! TTGCTAATGTTAGGTATTTA+TGG - chr4_2:44022438-44022457 Msa0601410:intron 25.0%
! TGCTAATGTTAGGTATTTAT+GGG - chr4_2:44022439-44022458 Msa0601410:intron 25.0%
! GATAGACTAGAATCATAAAT+AGG + chr4_2:44022949-44022968 None:intergenic 25.0%
! TTAAGTTCAATAGACGAATT+TGG - chr4_2:44023081-44023100 Msa0601410:intron 25.0%
! CAAGAACATGATTGTATTAT+GGG - chr4_2:44023171-44023190 Msa0601410:intron 25.0%
! AATTGAATATGCTTATGTGA+AGG - chr4_2:44023223-44023242 Msa0601410:intron 25.0%
!!! AGAATTTTGATCCAATTGTT+TGG - chr4_2:44023382-44023401 Msa0601410:intron 25.0%
! TTTCGTAGAAAGTTGTATAT+AGG - chr4_2:44023425-44023444 Msa0601410:intron 25.0%
!! TGGAGATTGATAATAAGAAA+GGG + chr4_2:44023505-44023524 None:intergenic 25.0%
!! ATGGAGATTGATAATAAGAA+AGG + chr4_2:44023506-44023525 None:intergenic 25.0%
! ATATACATCTTTGTATCTGA+CGG + chr4_2:44023800-44023819 None:intergenic 25.0%
AATTCAACACTCTACTATCT+AGG - chr4_2:44012910-44012929 Msa0601410:three_prime_UTR 30.0%
ATTCAACACTCTACTATCTA+GGG - chr4_2:44012911-44012930 Msa0601410:three_prime_UTR 30.0%
! ATCAAGTTGTTCATGTACAT+TGG - chr4_2:44013148-44013167 Msa0601410:three_prime_UTR 30.0%
!!! CCGGTTTTAATTTAAGGAAA+TGG - chr4_2:44013213-44013232 Msa0601410:three_prime_UTR 30.0%
ACTTAAACTACTAAATCGGT+TGG + chr4_2:44013402-44013421 None:intergenic 30.0%
CAATTGTTTGGAGATACATA+TGG - chr4_2:44013479-44013498 Msa0601410:three_prime_UTR 30.0%
TACCTAATCATATGATGTGT+TGG - chr4_2:44013568-44013587 Msa0601410:CDS 30.0%
CCAAGTGTGTAAGAAAAAAT+GGG + chr4_2:44013626-44013645 None:intergenic 30.0%
TCCAAGTGTGTAAGAAAAAA+TGG + chr4_2:44013627-44013646 None:intergenic 30.0%
TCAATTCACTGCAAAATTTG+TGG - chr4_2:44013700-44013719 Msa0601410:CDS 30.0%
TAGATCACATTGTGAAATTG+TGG + chr4_2:44013747-44013766 None:intergenic 30.0%
!! ATTTACTTTTGGCAGGAATT+TGG - chr4_2:44013885-44013904 Msa0601410:CDS 30.0%
AGTTCTGTGAGTAACTTAAA+CGG - chr4_2:44013996-44014015 Msa0601410:CDS 30.0%
TTCAACTCATTTGATCTTGT+CGG + chr4_2:44014458-44014477 None:intergenic 30.0%
!!! ACTGCCCTTATTTTTCTTTT+GGG - chr4_2:44014552-44014571 Msa0601410:CDS 30.0%
CAGACCCAAAAGAAAAATAA+GGG + chr4_2:44014559-44014578 None:intergenic 30.0%
ACAGACCCAAAAGAAAAATA+AGG + chr4_2:44014560-44014579 None:intergenic 30.0%
ATGTATTTGACTAACCCTAA+GGG + chr4_2:44014619-44014638 None:intergenic 30.0%
ATCTAAATTGGATGGGTATA+CGG - chr4_2:44014794-44014813 Msa0601410:intron 30.0%
GGAATGATTTATCAAGTGAA+AGG - chr4_2:44014844-44014863 Msa0601410:intron 30.0%
ATGATTTATCAAGTGAAAGG+GGG - chr4_2:44014847-44014866 Msa0601410:intron 30.0%
TGGAGTAAAGTTAACAAAGA+TGG - chr4_2:44014872-44014891 Msa0601410:intron 30.0%
GGAGTAAAGTTAACAAAGAT+GGG - chr4_2:44014873-44014892 Msa0601410:intron 30.0%
CTTGGAGTCATATTATCATT+TGG + chr4_2:44014918-44014937 None:intergenic 30.0%
CCAAAATATGTTGAAACATC+AGG + chr4_2:44015136-44015155 None:intergenic 30.0%
! CCTGATGTTTCAACATATTT+TGG - chr4_2:44015133-44015152 Msa0601410:intron 30.0%
!! TTTCTTTTGAGAAGCAAAAG+TGG + chr4_2:44015160-44015179 None:intergenic 30.0%
! TAAGTTAGATATGACTTGCA+TGG + chr4_2:44015257-44015276 None:intergenic 30.0%
TTCAAATCAGCATTTCCATT+TGG + chr4_2:44015643-44015662 None:intergenic 30.0%
AATATTGTGACACATGGTAT+TGG + chr4_2:44015864-44015883 None:intergenic 30.0%
TGTATCAATATTGTGACACA+TGG + chr4_2:44015870-44015889 None:intergenic 30.0%
!! TTGTTTTCTTGTTTAGAAGC+CGG - chr4_2:44015977-44015996 Msa0601410:CDS 30.0%
TTCAAGTAGGAAATTGTTTC+CGG + chr4_2:44015999-44016018 None:intergenic 30.0%
! TTGAATAGAAGTATAGACTG+GGG - chr4_2:44016040-44016059 Msa0601410:intron 30.0%
CCAAACAAAACAACGAAAAA+AGG + chr4_2:44016067-44016086 None:intergenic 30.0%
!!! CCTTTTTTCGTTGTTTTGTT+TGG - chr4_2:44016064-44016083 Msa0601410:intron 30.0%
!! AAATCAGAGCTTTTATTTGG+AGG - chr4_2:44016090-44016109 Msa0601410:intron 30.0%
CTTTGAACAATCACCAAATA+GGG + chr4_2:44016160-44016179 None:intergenic 30.0%
ACTTTGAACAATCACCAAAT+AGG + chr4_2:44016161-44016180 None:intergenic 30.0%
TCGTAAAAGCTACATATTCA+GGG + chr4_2:44016224-44016243 None:intergenic 30.0%
ATCGTAAAAGCTACATATTC+AGG + chr4_2:44016225-44016244 None:intergenic 30.0%
! GAATATGTAGCTTTTACGAT+TGG - chr4_2:44016225-44016244 Msa0601410:CDS 30.0%
! GCTTTTACGATTGGAAAATT+TGG - chr4_2:44016234-44016253 Msa0601410:CDS 30.0%
ATTTCTACCAAACCGATTAA+GGG + chr4_2:44016534-44016553 None:intergenic 30.0%
AATTTCTACCAAACCGATTA+AGG + chr4_2:44016535-44016554 None:intergenic 30.0%
! GGTTTGGTAGAAATTGATTT+AGG - chr4_2:44016540-44016559 Msa0601410:intron 30.0%
! GTAGAAATTGATTTAGGGAT+TGG - chr4_2:44016546-44016565 Msa0601410:intron 30.0%
TTTCCATTCCGAATTAACAA+GGG + chr4_2:44016572-44016591 None:intergenic 30.0%
TTCCAGAAAGAAAAAGTTCT+TGG - chr4_2:44016598-44016617 Msa0601410:CDS 30.0%
!! TTCCAAGAACTTTTTCTTTC+TGG + chr4_2:44016603-44016622 None:intergenic 30.0%
TTCTTGGAAAATAGAAAGGA+AGG - chr4_2:44016614-44016633 Msa0601410:CDS 30.0%
ACTAATAGGAGATCTTTACT+GGG + chr4_2:44016649-44016668 None:intergenic 30.0%
TTGAAAAGGTGATTATCAGA+AGG + chr4_2:44016683-44016702 None:intergenic 30.0%
!!! ATTCTGGTTTTGCATTGAAA+AGG + chr4_2:44016697-44016716 None:intergenic 30.0%
TTTCAATGCAAAACCAGAAT+TGG - chr4_2:44016697-44016716 Msa0601410:CDS 30.0%
AAGATATTCAAGGCTTAAAG+TGG + chr4_2:44016779-44016798 None:intergenic 30.0%
TTTAAGCCTTGAATATCTTC+TGG - chr4_2:44016780-44016799 Msa0601410:CDS 30.0%
GAGTGAAATAATCACACAAA+TGG - chr4_2:44016802-44016821 Msa0601410:CDS 30.0%
ATGTATATCAAGCTCTCTAT+TGG + chr4_2:44016843-44016862 None:intergenic 30.0%
TATTTGAATTACACATGGAG+GGG + chr4_2:44016896-44016915 None:intergenic 30.0%
AAGAGGTTAATAAATAACCG+GGG + chr4_2:44017129-44017148 None:intergenic 30.0%
AACAAACACAACATTCAAAG+AGG + chr4_2:44017146-44017165 None:intergenic 30.0%
TTGTGTTTGTTTACTTCACT+TGG - chr4_2:44017155-44017174 Msa0601410:intron 30.0%
TGTGTTTGTTTACTTCACTT+GGG - chr4_2:44017156-44017175 Msa0601410:intron 30.0%
TATTGGAATCAACAAATCTG+AGG - chr4_2:44017296-44017315 Msa0601410:intron 30.0%
ATTGGAATCAACAAATCTGA+GGG - chr4_2:44017297-44017316 Msa0601410:intron 30.0%
! TTTTACCAGTCAATTTTGTG+AGG - chr4_2:44017488-44017507 Msa0601410:intron 30.0%
TAAAACCTCACAAAATTGAC+TGG + chr4_2:44017496-44017515 None:intergenic 30.0%
!! TGTTTTTAATTGTTGGGCTA+GGG + chr4_2:44017648-44017667 None:intergenic 30.0%
!!! TTGTTTTTAATTGTTGGGCT+AGG + chr4_2:44017649-44017668 None:intergenic 30.0%
TAGCCCAACAATTAAAAACA+AGG - chr4_2:44017648-44017667 Msa0601410:intron 30.0%
! GTCATGATGATTAGTTAGTA+TGG - chr4_2:44017775-44017794 Msa0601410:CDS 30.0%
AATGTTAAAGCTTCTTCTGT+TGG - chr4_2:44017970-44017989 Msa0601410:intron 30.0%
AAGGGAGAAAAAATATCATC+TGG + chr4_2:44018057-44018076 None:intergenic 30.0%
!!! GATGATATTTTTTCTCCCTT+TGG - chr4_2:44018057-44018076 Msa0601410:intron 30.0%
TCACTTTCAGATAATCCAAA+GGG + chr4_2:44018075-44018094 None:intergenic 30.0%
TTCACTTTCAGATAATCCAA+AGG + chr4_2:44018076-44018095 None:intergenic 30.0%
TTATCTGAAAGTGAAGAATC+TGG - chr4_2:44018081-44018100 Msa0601410:intron 30.0%
AATTTATCGTCAATAAGACC+AGG - chr4_2:44018261-44018280 Msa0601410:CDS 30.0%
AGTTGAAAACAGAAGTAGAA+AGG + chr4_2:44018403-44018422 None:intergenic 30.0%
! GTTGTTATTGCAGCAAATAT+GGG - chr4_2:44018436-44018455 Msa0601410:CDS 30.0%
GTGAATAATTTAGCAGCTTA+TGG + chr4_2:44018602-44018621 None:intergenic 30.0%
CTAATATCACTACCATGTAT+AGG + chr4_2:44018629-44018648 None:intergenic 30.0%
GTGTTATGACATGATAACTT+GGG + chr4_2:44018683-44018702 None:intergenic 30.0%
AGTGTTATGACATGATAACT+TGG + chr4_2:44018684-44018703 None:intergenic 30.0%
AACATGTTCTTCCGATAAAT+TGG - chr4_2:44018798-44018817 Msa0601410:CDS 30.0%
ACATGTTCTTCCGATAAATT+GGG - chr4_2:44018799-44018818 Msa0601410:CDS 30.0%
! AATTGGGTTTTCTTCATTTC+TGG - chr4_2:44018815-44018834 Msa0601410:CDS 30.0%
AACCAAAAGTAGAAACGTAA+TGG + chr4_2:44019057-44019076 None:intergenic 30.0%
TTCAAATTTCCAGAAAAGGA+AGG + chr4_2:44019234-44019253 None:intergenic 30.0%
! TTCCTTGTCTGAAATATAAC+GGG - chr4_2:44019507-44019526 Msa0601410:intron 30.0%
!! GAGCAAATTTTTATTTCCTC+AGG - chr4_2:44019566-44019585 Msa0601410:intron 30.0%
TTATTTATAACAACACCCTG+AGG + chr4_2:44019585-44019604 None:intergenic 30.0%
!! AAGAAGTCTTTGGAATAATG+GGG + chr4_2:44019697-44019716 None:intergenic 30.0%
!! CAAAGAAGTCTTTGGAATAA+TGG + chr4_2:44019699-44019718 None:intergenic 30.0%
! AATGGAATCTGAAGTTGAAT+CGG - chr4_2:44019857-44019876 Msa0601410:intron 30.0%
TAAATCCCTACCATTATTTC+TGG + chr4_2:44020185-44020204 None:intergenic 30.0%
!! AATGTAAGAATGGACTGAAT+TGG + chr4_2:44020422-44020441 None:intergenic 30.0%
AACGGGTAATAATGTAAGAA+TGG + chr4_2:44020432-44020451 None:intergenic 30.0%
TGTTTGACTAATAGAATGGA+AGG - chr4_2:44020456-44020475 Msa0601410:intron 30.0%
AGAAACTTGGACAAAATTGA+TGG - chr4_2:44020485-44020504 Msa0601410:intron 30.0%
! GTCCTAATTTCTTCATTTTC+TGG - chr4_2:44020608-44020627 Msa0601410:intron 30.0%
AATTTCCATTTCTCGAGTTT+GGG - chr4_2:44020650-44020669 Msa0601410:intron 30.0%
!! CAAACACAACAAGTTGATAA+AGG + chr4_2:44021000-44021019 None:intergenic 30.0%
ATATGGAAGTTTGTAGATCT+CGG + chr4_2:44021023-44021042 None:intergenic 30.0%
ATTGCAATTTGAATCGTGTT+TGG - chr4_2:44021581-44021600 Msa0601410:intron 30.0%
!!! GTGTTTGGTTTTCTCTTTTT+TGG - chr4_2:44021596-44021615 Msa0601410:intron 30.0%
! TTTTACCCACATAAACTTGT+CGG + chr4_2:44021622-44021641 None:intergenic 30.0%
GAAGTTATTACTAACCCTAT+GGG + chr4_2:44021741-44021760 None:intergenic 30.0%
AGAAGTTATTACTAACCCTA+TGG + chr4_2:44021742-44021761 None:intergenic 30.0%
AGACAATTTCATGAGATCAT+GGG - chr4_2:44021891-44021910 Msa0601410:CDS 30.0%
!! TTTTCTACTCAAATTTTGGC+AGG - chr4_2:44022006-44022025 Msa0601410:intron 30.0%
! GAGGGGAAAACATTATATTT+TGG + chr4_2:44022171-44022190 None:intergenic 30.0%
CAAATTGAAGCGAGAAAATT+AGG - chr4_2:44022271-44022290 Msa0601410:intron 30.0%
ATAACATGGCAAAGATTTCT+AGG + chr4_2:44022370-44022389 None:intergenic 30.0%
AAACAGTACTTACATGATCA+AGG + chr4_2:44022404-44022423 None:intergenic 30.0%
ATAACAATTGTTCTGATGAG+TGG + chr4_2:44022612-44022631 None:intergenic 30.0%
AACAATTGTTATCCCAGAAT+GGG - chr4_2:44022620-44022639 Msa0601410:CDS 30.0%
TCAAGAACATCAAATCTTGA+CGG - chr4_2:44022715-44022734 Msa0601410:CDS 30.0%
TTATGATTCTAGTCTATCTG+TGG - chr4_2:44022951-44022970 Msa0601410:intron 30.0%
ATTGAACTTAAATCAGGTAG+TGG + chr4_2:44023072-44023091 None:intergenic 30.0%
TCGTCTATTGAACTTAAATC+AGG + chr4_2:44023078-44023097 None:intergenic 30.0%
GCAAGAACATGATTGTATTA+TGG - chr4_2:44023170-44023189 Msa0601410:intron 30.0%
TAAGCATATTCAATTCCGAT+AGG + chr4_2:44023218-44023237 None:intergenic 30.0%
AATATGCTTATGTGAAGGAA+TGG - chr4_2:44023228-44023247 Msa0601410:intron 30.0%
! TTTTGATAGAGATGTCTCAT+AGG + chr4_2:44023269-44023288 None:intergenic 30.0%
TATGAGACATCTCTATCAAA+AGG - chr4_2:44023268-44023287 Msa0601410:intron 30.0%
TATCAAAAGGAGAATTCACA+TGG - chr4_2:44023281-44023300 Msa0601410:intron 30.0%
TTTCTACGAAAATACCAACT+TGG + chr4_2:44023416-44023435 None:intergenic 30.0%
! TTGATAATAAGAAAGGGATC+TGG + chr4_2:44023499-44023518 None:intergenic 30.0%
! TCTGCATTTTTGAATCCAAT+TGG - chr4_2:44023580-44023599 Msa0601410:intron 30.0%
AAGTTGTTCATGTACATTGG+AGG - chr4_2:44013151-44013170 Msa0601410:three_prime_UTR 35.0%
CACCAACACATCATATGATT+AGG + chr4_2:44013573-44013592 None:intergenic 35.0%
! ATATGATGTGTTGGTGCATT+TGG - chr4_2:44013577-44013596 Msa0601410:CDS 35.0%
!!! CCCATTTTTTCTTACACACT+TGG - chr4_2:44013623-44013642 Msa0601410:CDS 35.0%
GTTAGTCACGGTAAAAAATG+TGG - chr4_2:44013651-44013670 Msa0601410:CDS 35.0%
GGTTAATTTAGTTGGGTAGA+TGG - chr4_2:44013672-44013691 Msa0601410:CDS 35.0%
ACCGATATAAGATGTCTCAT+GGG + chr4_2:44013851-44013870 None:intergenic 35.0%
TACCGATATAAGATGTCTCA+TGG + chr4_2:44013852-44013871 None:intergenic 35.0%
!! ACATGTGATTTACTTTTGGC+AGG - chr4_2:44013878-44013897 Msa0601410:CDS 35.0%
TTGTGCCCAAGAAAATCAAA+CGG + chr4_2:44013915-44013934 None:intergenic 35.0%
!! TTTGATTTTCTTGGGCACAA+GGG - chr4_2:44013915-44013934 Msa0601410:CDS 35.0%
AGTTCCACATCCTAAATCAA+TGG - chr4_2:44014175-44014194 Msa0601410:CDS 35.0%
GTTCCACATCCTAAATCAAT+GGG - chr4_2:44014176-44014195 Msa0601410:CDS 35.0%
AGGGGAGTTAAAACACATAA+AGG - chr4_2:44014211-44014230 Msa0601410:intron 35.0%
!! AATCATGTACCTAGCCTTTT+TGG + chr4_2:44014255-44014274 None:intergenic 35.0%
AGAACTTGATAGAGCTAACT+AGG + chr4_2:44014288-44014307 None:intergenic 35.0%
!! GTTAGCTCTATCAAGTTCTT+CGG - chr4_2:44014289-44014308 Msa0601410:intron 35.0%
GATGAATGGTGACAAACATT+AGG - chr4_2:44014335-44014354 Msa0601410:intron 35.0%
AATGGTGACAAACATTAGGA+TGG - chr4_2:44014339-44014358 Msa0601410:intron 35.0%
CAAAAGAAAAATAAGGGCAG+TGG + chr4_2:44014553-44014572 None:intergenic 35.0%
!!! CACTGCCCTTATTTTTCTTT+TGG - chr4_2:44014551-44014570 Msa0601410:CDS 35.0%
!! TTCTTTTGGGTCTGTTTTTC+AGG - chr4_2:44014565-44014584 Msa0601410:CDS 35.0%
!! TCTTTTGGGTCTGTTTTTCA+GGG - chr4_2:44014566-44014585 Msa0601410:CDS 35.0%
GGGTGTATGGCATTTAAAAA+AGG + chr4_2:44014599-44014618 None:intergenic 35.0%
TTTAAATGCCATACACCCTT+AGG - chr4_2:44014601-44014620 Msa0601410:CDS 35.0%
TTAAATGCCATACACCCTTA+GGG - chr4_2:44014602-44014621 Msa0601410:CDS 35.0%
CATGTATTTGACTAACCCTA+AGG + chr4_2:44014620-44014639 None:intergenic 35.0%
GCACATTACACACTACTATT+AGG + chr4_2:44014737-44014756 None:intergenic 35.0%
! AAGCATTTTTGATCTATCCC+TGG + chr4_2:44014763-44014782 None:intergenic 35.0%
GGATAGATCAAAAATGCTTG+AGG - chr4_2:44014764-44014783 Msa0601410:intron 35.0%
! TTGTCGCTTCTTTGAGTTTA+AGG + chr4_2:44014823-44014842 None:intergenic 35.0%
TAAACTCAAAGAAGCGACAA+AGG - chr4_2:44014823-44014842 Msa0601410:intron 35.0%
!! CATTTGGGATTTTGTGAATC+TGG + chr4_2:44014902-44014921 None:intergenic 35.0%
!!! CTTGTTCAGCATTGATTTTG+GGG + chr4_2:44014952-44014971 None:intergenic 35.0%
!!! GCTTGTTCAGCATTGATTTT+GGG + chr4_2:44014953-44014972 None:intergenic 35.0%
TGTTAAGAGCCTAACAAGAA+TGG - chr4_2:44015102-44015121 Msa0601410:intron 35.0%
GCAGATAATCCATTCTTGTT+AGG + chr4_2:44015114-44015133 None:intergenic 35.0%
AATCTGATTCAGACACTTAG+TGG - chr4_2:44015472-44015491 Msa0601410:intron 35.0%
ATCTGATTCAGACACTTAGT+GGG - chr4_2:44015473-44015492 Msa0601410:intron 35.0%
GTAGGAAACAGAGTTATAAC+TGG - chr4_2:44015589-44015608 Msa0601410:intron 35.0%
ATCAGCATTTCCATTTGGAA+GGG + chr4_2:44015638-44015657 None:intergenic 35.0%
AATCAGCATTTCCATTTGGA+AGG + chr4_2:44015639-44015658 None:intergenic 35.0%
ATGCGATTTAATGATGCTCA+GGG - chr4_2:44015664-44015683 Msa0601410:intron 35.0%
TTAGATGAAGAATGTGTTGG+AGG - chr4_2:44015748-44015767 Msa0601410:intron 35.0%
TAGATGAAGAATGTGTTGGA+GGG - chr4_2:44015749-44015768 Msa0601410:intron 35.0%
! ATTCACCATCTCCATGTTTT+AGG - chr4_2:44015810-44015829 Msa0601410:intron 35.0%
CAACAGAATACTGAATACAC+TGG + chr4_2:44015929-44015948 None:intergenic 35.0%
CCAGTTAAGAGAATTCAAGT+AGG + chr4_2:44016012-44016031 None:intergenic 35.0%
CCTACTTGAATTCTCTTAAC+TGG - chr4_2:44016009-44016028 Msa0601410:intron 35.0%
! TGAATAGAAGTATAGACTGG+GGG - chr4_2:44016041-44016060 Msa0601410:intron 35.0%
! TCTGTGCATTTTTCCCTATT+TGG - chr4_2:44016144-44016163 Msa0601410:intron 35.0%
! GAAGGGAACTAATAACTTGT+GGG - chr4_2:44016428-44016447 Msa0601410:CDS 35.0%
CTTTCCATTCCGAATTAACA+AGG + chr4_2:44016573-44016592 None:intergenic 35.0%
CTAATAGGAGATCTTTACTG+GGG + chr4_2:44016648-44016667 None:intergenic 35.0%
GACTAATAGGAGATCTTTAC+TGG + chr4_2:44016650-44016669 None:intergenic 35.0%
AAGATCTCCTATTAGTCATG+TGG - chr4_2:44016653-44016672 Msa0601410:CDS 35.0%
AGTACTTCTTGAACCAATTC+TGG + chr4_2:44016713-44016732 None:intergenic 35.0%
TTCACTCCAGAAGATATTCA+AGG + chr4_2:44016789-44016808 None:intergenic 35.0%
!! TAATCACACAAATGGATTGC+TGG - chr4_2:44016810-44016829 Msa0601410:CDS 35.0%
AGAGGTTAATAAATAACCGG+GGG + chr4_2:44017128-44017147 None:intergenic 35.0%
TTTGTTTACTTCACTTGGGT+AGG - chr4_2:44017160-44017179 Msa0601410:intron 35.0%
AAGTCAATTCCTGGATCTAT+TGG - chr4_2:44017279-44017298 Msa0601410:intron 35.0%
!! TTGTTGATTCCAATAGATCC+AGG + chr4_2:44017291-44017310 None:intergenic 35.0%
TTGTAGCAAAAGGAAACAAC+AGG - chr4_2:44017412-44017431 Msa0601410:intron 35.0%
TAACATTTCTTGTCACGTCA+TGG - chr4_2:44017438-44017457 Msa0601410:intron 35.0%
GATCAGACTTAATGCTTAGT+GGG + chr4_2:44017531-44017550 None:intergenic 35.0%
AATTAGAGCAAACACTCAAG+AGG - chr4_2:44017609-44017628 Msa0601410:intron 35.0%
! TCTGGTGGTCTTTTGTATTT+TGG + chr4_2:44018039-44018058 None:intergenic 35.0%
GGAGAAAAAATATCATCTGG+TGG + chr4_2:44018054-44018073 None:intergenic 35.0%
TTCTTCCTCATTTGTAACAG+AGG + chr4_2:44018183-44018202 None:intergenic 35.0%
AAAATGCCAAGAGATGAATC+AGG - chr4_2:44018204-44018223 Msa0601410:CDS 35.0%
ATTGACGATAAATTCCTTCC+AGG + chr4_2:44018255-44018274 None:intergenic 35.0%
! TTTTCAACTGTCATCATACC+TGG - chr4_2:44018414-44018433 Msa0601410:CDS 35.0%
! TATTTGCTGCAATAACAACC+AGG + chr4_2:44018435-44018454 None:intergenic 35.0%
! GGTTGTTATTGCAGCAAATA+TGG - chr4_2:44018435-44018454 Msa0601410:CDS 35.0%
!!! TCTTTCTGGTTTTTTGAAGG+AGG + chr4_2:44018465-44018484 None:intergenic 35.0%
!!! CGTTCTTTCTGGTTTTTTGA+AGG + chr4_2:44018468-44018487 None:intergenic 35.0%
AAAAAACCAGAAAGAACGCA+AGG - chr4_2:44018470-44018489 Msa0601410:CDS 35.0%
!!! AACATTGGTTCTCCTGATTT+TGG - chr4_2:44018519-44018538 Msa0601410:CDS 35.0%
! AAAACTATGCCTTGTTCATC+TGG - chr4_2:44018560-44018579 Msa0601410:CDS 35.0%
! AAACTATGCCTTGTTCATCT+GGG - chr4_2:44018561-44018580 Msa0601410:CDS 35.0%
CTATAATTCCCAGATGAACA+AGG + chr4_2:44018572-44018591 None:intergenic 35.0%
TTATTCACACTGCCTATACA+TGG - chr4_2:44018614-44018633 Msa0601410:CDS 35.0%
GGTAGTGATATTAGTGTGTT+AGG - chr4_2:44018635-44018654 Msa0601410:CDS 35.0%
!!! TGTGTTAGGTTTTTTCCAAC+TGG - chr4_2:44018649-44018668 Msa0601410:CDS 35.0%
ACTTGGGAAAATATTCCAGT+TGG + chr4_2:44018667-44018686 None:intergenic 35.0%
CATAACACTATGAGTCATTC+AGG - chr4_2:44018695-44018714 Msa0601410:CDS 35.0%
! CTCCATTACGTTTCTACTTT+TGG - chr4_2:44019052-44019071 Msa0601410:CDS 35.0%
!!! AGGTCCATTTTGGAGTAAAA+TGG - chr4_2:44019130-44019149 Msa0601410:intron 35.0%
! CACTCCATTTTACTCCAAAA+TGG + chr4_2:44019137-44019156 None:intergenic 35.0%
!! TATTTTTACTCCCATCAGCT+CGG - chr4_2:44019157-44019176 Msa0601410:intron 35.0%
TTGAATAGTTTCTGACGTAC+TGG - chr4_2:44019277-44019296 Msa0601410:intron 35.0%
TGAATAGTTTCTGACGTACT+GGG - chr4_2:44019278-44019297 Msa0601410:intron 35.0%
TACCAACGTATCATGATCAA+TGG + chr4_2:44019374-44019393 None:intergenic 35.0%
TTCCCGTTATATTTCAGACA+AGG + chr4_2:44019512-44019531 None:intergenic 35.0%
TTAGAGCACAAAGAAGTCTT+TGG + chr4_2:44019707-44019726 None:intergenic 35.0%
TATTCTTTGCTTCACTTTGC+TGG + chr4_2:44019758-44019777 None:intergenic 35.0%
TGAGAAAGCTCTATATGAAC+AGG - chr4_2:44020342-44020361 Msa0601410:intron 35.0%
GGAAGACAACTAGATAAATG+TGG + chr4_2:44020401-44020420 None:intergenic 35.0%
GAATTTCCATTTCTCGAGTT+TGG - chr4_2:44020649-44020668 Msa0601410:intron 35.0%
GATTAATGTGCTTACTTTGC+AGG - chr4_2:44020698-44020717 Msa0601410:intron 35.0%
ATTTGACCAACTTACCGAAA+TGG - chr4_2:44020738-44020757 Msa0601410:intron 35.0%
TCTCTTTCTGTAAGCCATTT+CGG + chr4_2:44020755-44020774 None:intergenic 35.0%
AATGGCTTACAGAAAGAGAT+TGG - chr4_2:44020756-44020775 Msa0601410:intron 35.0%
GTCTACAACAAACCTACAAT+GGG + chr4_2:44020871-44020890 None:intergenic 35.0%
TGTCTACAACAAACCTACAA+TGG + chr4_2:44020872-44020891 None:intergenic 35.0%
!! ACAAGTTGATAAAGGAGTGA+GGG + chr4_2:44020992-44021011 None:intergenic 35.0%
!! AACAAGTTGATAAAGGAGTG+AGG + chr4_2:44020993-44021012 None:intergenic 35.0%
AATTGTCACATTCTAACCAC+AGG - chr4_2:44021109-44021128 Msa0601410:CDS 35.0%
ATTGTCACATTCTAACCACA+GGG - chr4_2:44021110-44021129 Msa0601410:CDS 35.0%
CAGACAATTTCATGAGATCA+TGG - chr4_2:44021890-44021909 Msa0601410:CDS 35.0%
TTTCTGTTGAAGAATGAGGT+AGG - chr4_2:44021959-44021978 Msa0601410:CDS 35.0%
!! TTCAAAAAGCACTGTTCAGA+AGG - chr4_2:44022048-44022067 Msa0601410:intron 35.0%
TGTAGAAGATATGAAGAAGC+TGG - chr4_2:44022118-44022137 Msa0601410:intron 35.0%
AGCTTTGCTACATGTATTAC+TGG + chr4_2:44022245-44022264 None:intergenic 35.0%
AAAGGGTAACAACACATCTA+CGG + chr4_2:44022334-44022353 None:intergenic 35.0%
! TAGATGTGTTGTTACCCTTT+CGG - chr4_2:44022334-44022353 Msa0601410:intron 35.0%
! TCATGTAAGTACTGTTTCAC+TGG - chr4_2:44022407-44022426 Msa0601410:intron 35.0%
GCTGTATCTTTGCTAATGTT+AGG - chr4_2:44022429-44022448 Msa0601410:intron 35.0%
TGTTAGGTATTTATGGGTGT+TGG - chr4_2:44022445-44022464 Msa0601410:intron 35.0%
TGAGAAATATGATAGTCAGC+TGG - chr4_2:44022543-44022562 Msa0601410:CDS 35.0%
GAACAATTGTTATCCCAGAA+TGG - chr4_2:44022619-44022638 Msa0601410:CDS 35.0%
! TCTGGAATTAGAATTTGGTC+TGG + chr4_2:44022806-44022825 None:intergenic 35.0%
! TTTTGTTACTGTCCAATGAC+AGG + chr4_2:44022837-44022856 None:intergenic 35.0%
!! TTTTGCTTTGGCTTAGCTTT+TGG + chr4_2:44022871-44022890 None:intergenic 35.0%
TGATAGATTCATGGAAGCAA+AGG - chr4_2:44022909-44022928 Msa0601410:intron 35.0%
!! ATAGACGAATTTGGTGTATC+TGG - chr4_2:44023090-44023109 Msa0601410:intron 35.0%
AAGGAGAATTCACATGGATT+CGG - chr4_2:44023287-44023306 Msa0601410:intron 35.0%
TTTCTTGGAGTGGAGAAATT+TGG - chr4_2:44023348-44023367 Msa0601410:intron 35.0%
!! TGGTTGGTTTACCAAACAAT+TGG + chr4_2:44023396-44023415 None:intergenic 35.0%
TACGAAAATACCAACTTGGT+TGG + chr4_2:44023412-44023431 None:intergenic 35.0%
CCCAAAAAATTGCATTCCTA+GGG + chr4_2:44023627-44023646 None:intergenic 35.0%
!!! CCCTAGGAATGCAATTTTTT+GGG - chr4_2:44023624-44023643 Msa0601410:intron 35.0%
TCCCAAAAAATTGCATTCCT+AGG + chr4_2:44023628-44023647 None:intergenic 35.0%
!! GTTAAAAGGTGCCTAAAGTA+TGG - chr4_2:44023693-44023712 Msa0601410:intron 35.0%
! TTTTTGCCCATGTTATCACT+TGG - chr4_2:44023718-44023737 Msa0601410:intron 35.0%
!!! TCGGCACCGGTTTTAATTTA+AGG - chr4_2:44013207-44013226 Msa0601410:three_prime_UTR 40.0%
CATGAACATATGTTCGACAC+TGG - chr4_2:44013273-44013292 Msa0601410:three_prime_UTR 40.0%
!! CACCTTTTGATCAGAAGTGT+CGG - chr4_2:44013299-44013318 Msa0601410:three_prime_UTR 40.0%
TGTAGTTAACCAGATGTCTC+AGG - chr4_2:44013807-44013826 Msa0601410:CDS 40.0%
TCTCAGGTGTAGGGAAAATT+AGG - chr4_2:44013823-44013842 Msa0601410:CDS 40.0%
GCCCATGAGACATCTTATAT+CGG - chr4_2:44013847-44013866 Msa0601410:CDS 40.0%
!! GTACCCCGTTTGATTTTCTT+GGG - chr4_2:44013907-44013926 Msa0601410:CDS 40.0%
TGTGCCCAAGAAAATCAAAC+GGG + chr4_2:44013914-44013933 None:intergenic 40.0%
!! GTTTGATTTTCTTGGGCACA+AGG - chr4_2:44013914-44013933 Msa0601410:CDS 40.0%
!! CTGACTTGTTTCTCAGCATT+AGG - chr4_2:44013952-44013971 Msa0601410:CDS 40.0%
! CTTGTTTCTCAGCATTAGGA+AGG - chr4_2:44013956-44013975 Msa0601410:CDS 40.0%
CACAAGTGGGATAACTTCAT+CGG - chr4_2:44014025-44014044 Msa0601410:CDS 40.0%
CCTACAGTGATCAAATCTAG+CGG + chr4_2:44014077-44014096 None:intergenic 40.0%
AATATACGGGAGAGCTAAAG+AGG - chr4_2:44014105-44014124 Msa0601410:CDS 40.0%
ATATACGGGAGAGCTAAAGA+GGG - chr4_2:44014106-44014125 Msa0601410:CDS 40.0%
! ACCTCAGAAGACCATTCTTT+TGG - chr4_2:44014152-44014171 Msa0601410:CDS 40.0%
TCCAAAAGAATGGTCTTCTG+AGG + chr4_2:44014156-44014175 None:intergenic 40.0%
GATGTGGAACTCCAAAAGAA+TGG + chr4_2:44014166-44014185 None:intergenic 40.0%
!!! TATGTGTTTTAACTCCCCTG+AGG + chr4_2:44014210-44014229 None:intergenic 40.0%
TGTTCAAGATGCCTCCAAAA+AGG - chr4_2:44014238-44014257 Msa0601410:intron 40.0%
TAAATTGGATGGGTATACGG+AGG - chr4_2:44014797-44014816 Msa0601410:intron 40.0%
!!! CGCTTGTTCAGCATTGATTT+TGG + chr4_2:44014954-44014973 None:intergenic 40.0%
! GTTGCTTTAGCCCTACAATA+TGG - chr4_2:44015070-44015089 Msa0601410:intron 40.0%
GAAAGTAGGTCTGCTTCTAT+CGG - chr4_2:44015418-44015437 Msa0601410:intron 40.0%
TCTGATTCAGACACTTAGTG+GGG - chr4_2:44015474-44015493 Msa0601410:intron 40.0%
AAAACATGCAGATTACCTGC+TGG - chr4_2:44015517-44015536 Msa0601410:intron 40.0%
ATAAAGAAGAGGAGGTCTGT+CGG - chr4_2:44015562-44015581 Msa0601410:intron 40.0%
ACAGAGTTATAACTGGTGAG+AGG - chr4_2:44015596-44015615 Msa0601410:intron 40.0%
CAGAGTTATAACTGGTGAGA+GGG - chr4_2:44015597-44015616 Msa0601410:intron 40.0%
GATGCGATTTAATGATGCTC+AGG - chr4_2:44015663-44015682 Msa0601410:intron 40.0%
TTAATGATGCTCAGGGTTTC+AGG - chr4_2:44015671-44015690 Msa0601410:intron 40.0%
! AGAATGTGTTGGAGGGATTT+TGG - chr4_2:44015756-44015775 Msa0601410:intron 40.0%
GTGATCCTAAAACATGGAGA+TGG + chr4_2:44015818-44015837 None:intergenic 40.0%
! GAGGTCTTGTAAAGATCTGA+TGG - chr4_2:44016109-44016128 Msa0601410:intron 40.0%
TATTAGTTCCCTTCCTATCC+CGG + chr4_2:44016422-44016441 None:intergenic 40.0%
GGAAGGGAACTAATAACTTG+TGG - chr4_2:44016427-44016446 Msa0601410:CDS 40.0%
! TCCTCTTGCTGTGATATTTG+TGG - chr4_2:44016499-44016518 Msa0601410:intron 40.0%
AAATAGAAAGGAAGGCTGAG+AGG - chr4_2:44016622-44016641 Msa0601410:CDS 40.0%
TGAATGTGCTTCACTGCTAT+TGG - chr4_2:44016937-44016956 Msa0601410:CDS 40.0%
GAATGTGCTTCACTGCTATT+GGG - chr4_2:44016938-44016957 Msa0601410:CDS 40.0%
GTAGTTACATCATTGCCGAA+TGG - chr4_2:44017182-44017201 Msa0601410:intron 40.0%
TGCAGATTGAAGTCAATTCC+TGG - chr4_2:44017270-44017289 Msa0601410:intron 40.0%
TCTTCAGAGCCTAATATCAC+AGG - chr4_2:44017321-44017340 Msa0601410:intron 40.0%
! TATGTTTTCCCTGTGAAGAG+AGG + chr4_2:44017379-44017398 None:intergenic 40.0%
GGATCAGACTTAATGCTTAG+TGG + chr4_2:44017532-44017551 None:intergenic 40.0%
TTGAAAGCTGTTACCAACCT+GGG + chr4_2:44017747-44017766 None:intergenic 40.0%
TTTGAAAGCTGTTACCAACC+TGG + chr4_2:44017748-44017767 None:intergenic 40.0%
TATACATCCAATGACCCAGT+GGG - chr4_2:44017834-44017853 Msa0601410:intron 40.0%
! CTTCGTGTGCGTGAATTTTT+AGG + chr4_2:44017874-44017893 None:intergenic 40.0%
GATCTCCTCTGTTACAAATG+AGG - chr4_2:44018175-44018194 Msa0601410:intron 40.0%
TCAAAACCTTGCGTTCTTTC+TGG + chr4_2:44018479-44018498 None:intergenic 40.0%
!! ATTGGTTCTCCTGATTTTGG+AGG - chr4_2:44018522-44018541 Msa0601410:CDS 40.0%
TATTGAAACGTGTCTGTCCA+GGG - chr4_2:44018921-44018940 Msa0601410:intron 40.0%
AGCAAAAGCTACACACAAGA+AGG + chr4_2:44019108-44019127 None:intergenic 40.0%
! TTGTGTGTAGCTTTTGCTTC+AGG - chr4_2:44019110-44019129 Msa0601410:CDS 40.0%
! CTTTTGCTTCAGGTCCATTT+TGG - chr4_2:44019120-44019139 Msa0601410:intron 40.0%
! GGATGATGCATCTTTTGTGA+AGG - chr4_2:44019178-44019197 Msa0601410:intron 40.0%
! TGCATCTTTTGTGAAGGAAC+AGG - chr4_2:44019184-44019203 Msa0601410:intron 40.0%
TGAAGGAACAGGTAGCTAAA+CGG - chr4_2:44019195-44019214 Msa0601410:intron 40.0%
! TGAACATTGCCTTCCTTTTC+TGG - chr4_2:44019222-44019241 Msa0601410:intron 40.0%
!!! GACGTACTGGGTTTTGTTTT+TGG - chr4_2:44019290-44019309 Msa0601410:intron 40.0%
GCTCAATATTGCTGACGATT+TGG - chr4_2:44019324-44019343 Msa0601410:CDS 40.0%
TGCCATTGATCATGATACGT+TGG - chr4_2:44019369-44019388 Msa0601410:CDS 40.0%
TAAAACCACTCAAGGTTCAC+AGG - chr4_2:44019605-44019624 Msa0601410:intron 40.0%
AAAACCACTCAAGGTTCACA+GGG - chr4_2:44019606-44019625 Msa0601410:intron 40.0%
! TCGATTTTGAACCGAAAGAC+CGG - chr4_2:44019829-44019848 Msa0601410:intron 40.0%
CTTCAGATTCCATTCTATCC+CGG + chr4_2:44019851-44019870 None:intergenic 40.0%
GTACTGCATCGAACACATTT+AGG - chr4_2:44019937-44019956 Msa0601410:intron 40.0%
ATAAGCTGATAGTCACCATC+AGG + chr4_2:44020113-44020132 None:intergenic 40.0%
TGACTATCAGCTTATGTCTC+TGG - chr4_2:44020118-44020137 Msa0601410:intron 40.0%
GTACAAGCAAAGCAAGTAGA+AGG + chr4_2:44020270-44020289 None:intergenic 40.0%
TCATCTTGCTCTGCTAAATC+AGG + chr4_2:44020295-44020314 None:intergenic 40.0%
TGGAAGGAAGAAGAGAAACT+TGG - chr4_2:44020472-44020491 Msa0601410:intron 40.0%
ATTGATGGAGCTATTCTCAC+AGG - chr4_2:44020500-44020519 Msa0601410:intron 40.0%
TTGATGGAGCTATTCTCACA+GGG - chr4_2:44020501-44020520 Msa0601410:intron 40.0%
TTTAGCCCAAACTCGAGAAA+TGG + chr4_2:44020658-44020677 None:intergenic 40.0%
TGTAAGCCATTTCGGTAAGT+TGG + chr4_2:44020747-44020766 None:intergenic 40.0%
ATAAACCTCTTGTCGTAGCA+TGG - chr4_2:44020828-44020847 Msa0601410:intron 40.0%
CAAAGGATTAGACCCATTGT+AGG - chr4_2:44020856-44020875 Msa0601410:intron 40.0%
ACTTTGCTAGCATTTGCAAG+AGG - chr4_2:44020897-44020916 Msa0601410:intron 40.0%
ATAAAGGAGTGAGGGAACTT+TGG + chr4_2:44020984-44021003 None:intergenic 40.0%
! TTTTGGCCGACAAGTTTATG+TGG - chr4_2:44021613-44021632 Msa0601410:intron 40.0%
TTTGGCCGACAAGTTTATGT+GGG - chr4_2:44021614-44021633 Msa0601410:intron 40.0%
TAACCAAAGCCTATTCCCAT+AGG + chr4_2:44021936-44021955 None:intergenic 40.0%
GGTTTCAACACAAGTTGCTT+TGG - chr4_2:44022069-44022088 Msa0601410:intron 40.0%
TGTTACCCTTTCGGCATATT+AGG - chr4_2:44022343-44022362 Msa0601410:intron 40.0%
TAGGACCTAATATGCCGAAA+GGG + chr4_2:44022351-44022370 None:intergenic 40.0%
AGGAAGACAGTCTGATAACA+TGG + chr4_2:44022384-44022403 None:intergenic 40.0%
! TGTTTTGTGTCTACTGCTAC+AGG - chr4_2:44022502-44022521 Msa0601410:CDS 40.0%
AATGGGTCTGTGATGATCAA+GGG - chr4_2:44022637-44022656 Msa0601410:CDS 40.0%
CTCTTTCCTTTGACTCCAAT+AGG + chr4_2:44022748-44022767 None:intergenic 40.0%
TCAAAGGAAAGAGAAGTGAG+AGG - chr4_2:44022755-44022774 Msa0601410:exon 40.0%
CAAAGGAAAGAGAAGTGAGA+GGG - chr4_2:44022756-44022775 Msa0601410:five_prime_UTR 40.0%
!! CCAGCTCTGGAATTAGAATT+TGG + chr4_2:44022811-44022830 None:intergenic 40.0%
CCAAATTCTAATTCCAGAGC+TGG - chr4_2:44022808-44022827 Msa0601410:five_prime_UTR 40.0%
!!! GCAGCAGTACTTTTTTGCTT+TGG + chr4_2:44022883-44022902 None:intergenic 40.0%
AGCAACAATGGCAGTAAAGA+CGG - chr4_2:44022982-44023001 Msa0601410:intron 40.0%
! AGTAAAGGAATCCACTGACT+TGG - chr4_2:44023038-44023057 Msa0601410:intron 40.0%
TATGGGCCTTGAAATTCCAA+TGG - chr4_2:44023188-44023207 Msa0601410:intron 40.0%
AATTCCAATGGACGACCTAT+CGG - chr4_2:44023200-44023219 Msa0601410:intron 40.0%
AAGAAACCCAGGTTACATCA+CGG + chr4_2:44023334-44023353 None:intergenic 40.0%
! AGTGGAGAAATTTGGTGGTT+AGG - chr4_2:44023356-44023375 Msa0601410:intron 40.0%
GTTTGGTAAACCAACCAAGT+TGG - chr4_2:44023399-44023418 Msa0601410:intron 40.0%
TTTGGCACGGTAAAACCAAT+TGG + chr4_2:44023598-44023617 None:intergenic 40.0%
!!! GCCCTAGGAATGCAATTTTT+TGG - chr4_2:44023623-44023642 Msa0601410:intron 40.0%
GGGCAAAAAAGCCATACTTT+AGG + chr4_2:44023707-44023726 None:intergenic 40.0%
! TGCGAAGAAGAGCGTGAATT+GGG + chr4_2:44012947-44012966 None:intergenic 45.0%
! TTGCGAAGAAGAGCGTGAAT+TGG + chr4_2:44012948-44012967 None:intergenic 45.0%
CACCGACACTTCTGATCAAA+AGG + chr4_2:44013304-44013323 None:intergenic 45.0%
CACTTGGAACACGTTAGTCA+CGG - chr4_2:44013639-44013658 Msa0601410:CDS 45.0%
TAACCAGATGTCTCAGGTGT+AGG - chr4_2:44013813-44013832 Msa0601410:CDS 45.0%
AACCAGATGTCTCAGGTGTA+GGG - chr4_2:44013814-44013833 Msa0601410:CDS 45.0%
!! GGTACCCCGTTTGATTTTCT+TGG - chr4_2:44013906-44013925 Msa0601410:CDS 45.0%
GTGCCCAAGAAAATCAAACG+GGG + chr4_2:44013913-44013932 None:intergenic 45.0%
CTGAGAAACAAGTCAGCAGA+AGG + chr4_2:44013948-44013967 None:intergenic 45.0%
CTCAGCATTAGGAAGGTCAA+CGG - chr4_2:44013963-44013982 Msa0601410:CDS 45.0%
AAATCTAGCGGCAAACACTG+GGG + chr4_2:44014065-44014084 None:intergenic 45.0%
CAAATCTAGCGGCAAACACT+GGG + chr4_2:44014066-44014085 None:intergenic 45.0%
TCAAATCTAGCGGCAAACAC+TGG + chr4_2:44014067-44014086 None:intergenic 45.0%
CCGCTAGATTTGATCACTGT+AGG - chr4_2:44014074-44014093 Msa0601410:CDS 45.0%
AAGATGCCTCCAAAAAGGCT+AGG - chr4_2:44014243-44014262 Msa0601410:intron 45.0%
!! CATGTACCTAGCCTTTTTGG+AGG + chr4_2:44014252-44014271 None:intergenic 45.0%
! TGACTAACCCTAAGGGTGTA+TGG + chr4_2:44014612-44014631 None:intergenic 45.0%
TAGTGTGTAATGTGCTGTCC+AGG - chr4_2:44014742-44014761 Msa0601410:intron 45.0%
AGTGTGTAATGTGCTGTCCA+GGG - chr4_2:44014743-44014762 Msa0601410:intron 45.0%
TTATCAAGTGAAAGGGGGAG+TGG - chr4_2:44014852-44014871 Msa0601410:intron 45.0%
! TTTGGGGTCTTGACTTCTCT+TGG + chr4_2:44014936-44014955 None:intergenic 45.0%
GAACAAGCGAATTCGTACCT+CGG - chr4_2:44014965-44014984 Msa0601410:intron 45.0%
CTGATTCAGACACTTAGTGG+GGG - chr4_2:44015475-44015494 Msa0601410:intron 45.0%
AAACGAGCTACCCTTCCAAA+TGG - chr4_2:44015625-44015644 Msa0601410:intron 45.0%
CAAGGGGTGATCCTAAAACA+TGG + chr4_2:44015824-44015843 None:intergenic 45.0%
AGATCGGACAAGGACTAAGA+TGG - chr4_2:44016322-44016341 Msa0601410:intron 45.0%
GGACTGCGACTTTGCATAAT+GGG - chr4_2:44016363-44016382 Msa0601410:intron 45.0%
ATTAGTTCCCTTCCTATCCC+GGG + chr4_2:44016421-44016440 None:intergenic 45.0%
GCCACAAATATCACAGCAAG+AGG + chr4_2:44016503-44016522 None:intergenic 45.0%
!! GGGATTGGCCCTTGTTAATT+CGG - chr4_2:44016561-44016580 Msa0601410:CDS 45.0%
TGGCCCTTGTTAATTCGGAA+TGG - chr4_2:44016566-44016585 Msa0601410:CDS 45.0%
AGGAGAGCCACATGACTAAT+AGG + chr4_2:44016663-44016682 None:intergenic 45.0%
ACACGCACACCTGTGATATT+AGG + chr4_2:44017333-44017352 None:intergenic 45.0%
GTGATGCTTACAGATGAGCA+AGG - chr4_2:44017351-44017370 Msa0601410:intron 45.0%
! TTCCTTTTGCTACAACGCTC+TGG + chr4_2:44017407-44017426 None:intergenic 45.0%
TTACCAACCTGGGAAACTTC+CGG + chr4_2:44017737-44017756 None:intergenic 45.0%
CTATACATCCAATGACCCAG+TGG - chr4_2:44017833-44017852 Msa0601410:intron 45.0%
ATACATCCAATGACCCAGTG+GGG - chr4_2:44017835-44017854 Msa0601410:intron 45.0%
!! CGTGTGCGTGAATTTTTAGG+TGG + chr4_2:44017871-44017890 None:intergenic 45.0%
CAGATGAGACCTGAACTTCA+AGG + chr4_2:44017927-44017946 None:intergenic 45.0%
GAAGTTCAGGTCTCATCTGA+AGG - chr4_2:44017928-44017947 Msa0601410:intron 45.0%
CTTCTTCTGTTGGCAACGAT+GGG - chr4_2:44017980-44017999 Msa0601410:intron 45.0%
TGTCTACACTGCTAGCTAGT+GGG + chr4_2:44018008-44018027 None:intergenic 45.0%
TTGTCTACACTGCTAGCTAG+TGG + chr4_2:44018009-44018028 None:intergenic 45.0%
GAAAGTGAAGAATCTGGTGC+TGG - chr4_2:44018087-44018106 Msa0601410:intron 45.0%
GAATGCCAGTGACTTTGCTT+TGG - chr4_2:44018137-44018156 Msa0601410:intron 45.0%
ACTTTGCTTTGGCTGCTGAT+AGG - chr4_2:44018148-44018167 Msa0601410:intron 45.0%
CTTTGCTTTGGCTGCTGATA+GGG - chr4_2:44018149-44018168 Msa0601410:intron 45.0%
CCATCTCCTGATTCATCTCT+TGG + chr4_2:44018213-44018232 None:intergenic 45.0%
CCAAGAGATGAATCAGGAGA+TGG - chr4_2:44018210-44018229 Msa0601410:CDS 45.0%
ATAAGACCAGGCCTTCCATT+AGG - chr4_2:44018273-44018292 Msa0601410:CDS 45.0%
TAAGACCAGGCCTTCCATTA+GGG - chr4_2:44018274-44018293 Msa0601410:CDS 45.0%
ACCTATACTGAAGCCAGTTC+AGG - chr4_2:44018317-44018336 Msa0601410:intron 45.0%
! TCCTGAACTGGCTTCAGTAT+AGG + chr4_2:44018321-44018340 None:intergenic 45.0%
TGAAGCCAGTTCAGGAAACA+AGG - chr4_2:44018325-44018344 Msa0601410:intron 45.0%
!! TTAGGCCTTGTTTCCTGAAC+TGG + chr4_2:44018333-44018352 None:intergenic 45.0%
!!! GCAAGGTTTTGACTCGTGTA+GGG - chr4_2:44018487-44018506 Msa0601410:CDS 45.0%
!! TTTTGACTCGTGTAGGGAAG+CGG - chr4_2:44018493-44018512 Msa0601410:CDS 45.0%
!! TCTCCTGATTTTGGAGGTAG+TGG - chr4_2:44018528-44018547 Msa0601410:CDS 45.0%
TCACCACTACCTCCAAAATC+AGG + chr4_2:44018534-44018553 None:intergenic 45.0%
GTATTGAAACGTGTCTGTCC+AGG - chr4_2:44018920-44018939 Msa0601410:intron 45.0%
ATTGAAACGTGTCTGTCCAG+GGG - chr4_2:44018922-44018941 Msa0601410:intron 45.0%
CCACTTTGATGAACCCAAGT+CGG - chr4_2:44019641-44019660 Msa0601410:intron 45.0%
GCTAGTGATGATTCTCACTG+TGG - chr4_2:44019792-44019811 Msa0601410:intron 45.0%
! CGATTTTGAACCGAAAGACC+GGG - chr4_2:44019830-44019849 Msa0601410:intron 45.0%
TCCATTCTATCCCGGTCTTT+CGG + chr4_2:44019843-44019862 None:intergenic 45.0%
! GGAATCTGAAGTTGAATCGG+AGG - chr4_2:44019860-44019879 Msa0601410:intron 45.0%
! ATCTGAAGTTGAATCGGAGG+TGG - chr4_2:44019863-44019882 Msa0601410:intron 45.0%
GTAAAGGACTGGATGTGTCT+GGG + chr4_2:44019965-44019984 None:intergenic 45.0%
TGTAAAGGACTGGATGTGTC+TGG + chr4_2:44019966-44019985 None:intergenic 45.0%
TCCAGTCCTTTACAAAGCAC+CGG - chr4_2:44019972-44019991 Msa0601410:intron 45.0%
CAAACTCCGGTGCTTTGTAA+AGG + chr4_2:44019981-44020000 None:intergenic 45.0%
!! CTTTACAAAGCACCGGAGTT+TGG - chr4_2:44019979-44019998 Msa0601410:intron 45.0%
GGTGTGAGTGATATCAGAGA+TGG + chr4_2:44020024-44020043 None:intergenic 45.0%
CCATCAGGAGAAGGAAAACT+AGG + chr4_2:44020098-44020117 None:intergenic 45.0%
!! CCTAGTTTTCCTTCTCCTGA+TGG - chr4_2:44020095-44020114 Msa0601410:intron 45.0%
TGATAGTCACCATCAGGAGA+AGG + chr4_2:44020107-44020126 None:intergenic 45.0%
CACGGTTACTTGAAGCTTAC+TGG - chr4_2:44020229-44020248 Msa0601410:intron 45.0%
TTAGACCATGCTACGACAAG+AGG + chr4_2:44020836-44020855 None:intergenic 45.0%
GTCGTAGCATGGTCTAACAA+AGG - chr4_2:44020839-44020858 Msa0601410:intron 45.0%
CCAAATATGTTGCTCTGCGT+TGG + chr4_2:44021069-44021088 None:intergenic 45.0%
CCAACGCAGAGCAACATATT+TGG - chr4_2:44021066-44021085 Msa0601410:CDS 45.0%
ACATTCTAACCACAGGGATG+AGG - chr4_2:44021116-44021135 Msa0601410:CDS 45.0%
CATTCTAACCACAGGGATGA+GGG - chr4_2:44021117-44021136 Msa0601410:CDS 45.0%
!! TGTTGGGCTAGTTTCAATGC+AGG - chr4_2:44021178-44021197 Msa0601410:CDS 45.0%
!! GGCTAGTTTCAATGCAGGAA+GGG - chr4_2:44021183-44021202 Msa0601410:CDS 45.0%
CCAACGTCACAAACTGACAA+AGG + chr4_2:44021684-44021703 None:intergenic 45.0%
CCTTTGTCAGTTTGTGACGT+TGG - chr4_2:44021681-44021700 Msa0601410:intron 45.0%
TACTTGCGCATATGACTCTG+GGG + chr4_2:44021717-44021736 None:intergenic 45.0%
CTACTTGCGCATATGACTCT+GGG + chr4_2:44021718-44021737 None:intergenic 45.0%
ATATGCGCAAGTAGCCCATA+GGG - chr4_2:44021724-44021743 Msa0601410:intron 45.0%
TTCTGTAGCAGTTTGACTGC+CGG - chr4_2:44021758-44021777 Msa0601410:CDS 45.0%
ATGATAACACACCCCACCTA+TGG - chr4_2:44021917-44021936 Msa0601410:CDS 45.0%
TGATAACACACCCCACCTAT+GGG - chr4_2:44021918-44021937 Msa0601410:CDS 45.0%
AAAGCCTATTCCCATAGGTG+GGG + chr4_2:44021931-44021950 None:intergenic 45.0%
CAAAGCCTATTCCCATAGGT+GGG + chr4_2:44021932-44021951 None:intergenic 45.0%
CAGGCAGATTGCATTGTTTC+TGG - chr4_2:44022214-44022233 Msa0601410:intron 45.0%
CTAGGACCTAATATGCCGAA+AGG + chr4_2:44022352-44022371 None:intergenic 45.0%
TCAGCTGGATTATGCAGACA+GGG - chr4_2:44022558-44022577 Msa0601410:CDS 45.0%
GATCATCACAGACCCATTCT+GGG + chr4_2:44022635-44022654 None:intergenic 45.0%
TGATCATCACAGACCCATTC+TGG + chr4_2:44022636-44022655 None:intergenic 45.0%
GAATGGGTCTGTGATGATCA+AGG - chr4_2:44022636-44022655 Msa0601410:CDS 45.0%
ATGGGTCTGTGATGATCAAG+GGG - chr4_2:44022638-44022657 Msa0601410:CDS 45.0%
TGATGATCAAGGGGAAGAAG+AGG - chr4_2:44022647-44022666 Msa0601410:CDS 45.0%
GATGATCAAGGGGAAGAAGA+GGG - chr4_2:44022648-44022667 Msa0601410:CDS 45.0%
AAGAGGGAAATGCTGGTCAA+TGG - chr4_2:44022664-44022683 Msa0601410:CDS 45.0%
GCTGTTCCTATTGGAGTCAA+AGG - chr4_2:44022739-44022758 Msa0601410:exon 45.0%
AGAGGGATAGAAATCAGACC+CGG - chr4_2:44022773-44022792 Msa0601410:five_prime_UTR 45.0%
AATTTGGTCTGGACTGATCC+CGG + chr4_2:44022795-44022814 None:intergenic 45.0%
GTGGCTAATGCAAGCAACAA+TGG - chr4_2:44022970-44022989 Msa0601410:intron 45.0%
GCAACAATGGCAGTAAAGAC+GGG - chr4_2:44022983-44023002 Msa0601410:intron 45.0%
CAACAATGGCAGTAAAGACG+GGG - chr4_2:44022984-44023003 Msa0601410:intron 45.0%
! AAAGACGGGGCATCATTATC+TGG - chr4_2:44022997-44023016 Msa0601410:intron 45.0%
GGCATCATTATCTGGTAACC+AGG - chr4_2:44023005-44023024 Msa0601410:intron 45.0%
!! CCTTTACTTGAGAAGTGTCC+TGG + chr4_2:44023026-44023045 None:intergenic 45.0%
CCAGGACACTTCTCAAGTAA+AGG - chr4_2:44023023-44023042 Msa0601410:intron 45.0%
TGGCAAATTCTCCAAGTCAG+TGG + chr4_2:44023052-44023071 None:intergenic 45.0%
GGTGTATCTGGTGAACTTGA+CGG - chr4_2:44023102-44023121 Msa0601410:intron 45.0%
GTGTATCTGGTGAACTTGAC+GGG - chr4_2:44023103-44023122 Msa0601410:intron 45.0%
AGCCAAGAACCAAGATCTTG+TGG + chr4_2:44023129-44023148 None:intergenic 45.0%
!! TGGCTGAACTTTGATGACGA+TGG - chr4_2:44023144-44023163 Msa0601410:intron 45.0%
GGTCGTCCATTGGAATTTCA+AGG + chr4_2:44023197-44023216 None:intergenic 45.0%
AATTCCGATAGGTCGTCCAT+TGG + chr4_2:44023207-44023226 None:intergenic 45.0%
ATCAAGACCGTGATGTAACC+TGG - chr4_2:44023324-44023343 Msa0601410:intron 45.0%
TCAAGACCGTGATGTAACCT+GGG - chr4_2:44023325-44023344 Msa0601410:intron 45.0%
GTGATGTAACCTGGGTTTCT+TGG - chr4_2:44023333-44023352 Msa0601410:intron 45.0%
CTTGGAGTGGAGAAATTTGG+TGG - chr4_2:44023351-44023370 Msa0601410:intron 45.0%
ACAGCGCCAAGTGATAACAT+GGG + chr4_2:44023727-44023746 None:intergenic 45.0%
TTATCACTTGGCGCTGTCTA+CGG - chr4_2:44023730-44023749 Msa0601410:intron 45.0%
! CGGTCTGAAAAACTTGCTCA+CGG + chr4_2:44023780-44023799 None:intergenic 45.0%
!!! TTTTTTTTTATCAAAATAAA+AGG - chr4_2:44021478-44021497 Msa0601410:intron 5.0%
!!! TTTTTTTTATCAAAATAAAA+GGG - chr4_2:44021479-44021498 Msa0601410:intron 5.0%
! GCGAAGAAGAGCGTGAATTG+GGG + chr4_2:44012946-44012965 None:intergenic 50.0%
ATGACACGACACTGACACGT+CGG - chr4_2:44013188-44013207 Msa0601410:three_prime_UTR 50.0%
TTCCCTACACCTGAGACATC+TGG + chr4_2:44013819-44013838 None:intergenic 50.0%
TTAAACGGCAGCAGCACAAG+TGG - chr4_2:44014011-44014030 Msa0601410:CDS 50.0%
TAAACGGCAGCAGCACAAGT+GGG - chr4_2:44014012-44014031 Msa0601410:CDS 50.0%
GGAGAGCTAAAGAGGGTTCT+GGG - chr4_2:44014113-44014132 Msa0601410:CDS 50.0%
!! TCTTCTGAGGTGTTTCCAGG+AGG + chr4_2:44014143-44014162 None:intergenic 50.0%
!! TGGTCTTCTGAGGTGTTTCC+AGG + chr4_2:44014146-44014165 None:intergenic 50.0%
!! GGGCCCATTGATTTAGGATG+TGG + chr4_2:44014182-44014201 None:intergenic 50.0%
CATCCTAAATCAATGGGCCC+AGG - chr4_2:44014182-44014201 Msa0601410:CDS 50.0%
!!! GGGTCTGTTTTTCAGGGTGT+CGG - chr4_2:44014572-44014591 Msa0601410:CDS 50.0%
!!! GGTCTGTTTTTCAGGGTGTC+GGG - chr4_2:44014573-44014592 Msa0601410:CDS 50.0%
AGCAGACCTACTTTCCTCCT+GGG + chr4_2:44015413-44015432 None:intergenic 50.0%
AAGCAGACCTACTTTCCTCC+TGG + chr4_2:44015414-44015433 None:intergenic 50.0%
ACAGCAGATGCTCACTGAGA+AGG - chr4_2:44015444-44015463 Msa0601410:intron 50.0%
CAGATGCTCACTGAGAAGGA+TGG - chr4_2:44015448-44015467 Msa0601410:intron 50.0%
ACATGCAGATTACCTGCTGG+AGG - chr4_2:44015520-44015539 Msa0601410:intron 50.0%
AGATTACCTGCTGGAGGTGA+GGG - chr4_2:44015526-44015545 Msa0601410:intron 50.0%
!! CACATGGTATTGGTGCCCTT+CGG + chr4_2:44015854-44015873 None:intergenic 50.0%
AAACCTAGATAAGCCTCCCC+TGG - chr4_2:44016282-44016301 Msa0601410:intron 50.0%
AACCTAGATAAGCCTCCCCT+GGG - chr4_2:44016283-44016302 Msa0601410:intron 50.0%
TCGGACAAGGACTAAGATGG+TGG - chr4_2:44016325-44016344 Msa0601410:intron 50.0%
CGGACAAGGACTAAGATGGT+GGG - chr4_2:44016326-44016345 Msa0601410:intron 50.0%
GGACAAGGACTAAGATGGTG+GGG - chr4_2:44016327-44016346 Msa0601410:intron 50.0%
! ATGGTGGGGAACAGTGTACA+GGG - chr4_2:44016341-44016360 Msa0601410:intron 50.0%
GGGACTGCGACTTTGCATAA+TGG - chr4_2:44016362-44016381 Msa0601410:intron 50.0%
AACTTGTGGGCGAATCTCGA+CGG - chr4_2:44016441-44016460 Msa0601410:intron 50.0%
TGGCACCTCGATCCCTTAAT+CGG - chr4_2:44016519-44016538 Msa0601410:intron 50.0%
CCAAACCGATTAAGGGATCG+AGG + chr4_2:44016527-44016546 None:intergenic 50.0%
CCTCGATCCCTTAATCGGTT+TGG - chr4_2:44016524-44016543 Msa0601410:intron 50.0%
CTCATGCTAATCTGTTCCCC+CGG - chr4_2:44017109-44017128 Msa0601410:CDS 50.0%
!! GACCAGAGCGTTGTAGCAAA+AGG - chr4_2:44017402-44017421 Msa0601410:intron 50.0%
GCACTAACTGAACCCGTTCT+TGG + chr4_2:44017685-44017704 None:intergenic 50.0%
TCTAACATCCAGTCTCCTGC+CGG - chr4_2:44017715-44017734 Msa0601410:intron 50.0%
CTGAACTTCAAGGTTGCGTG+AGG + chr4_2:44017917-44017936 None:intergenic 50.0%
CTCACGCAACCTTGAAGTTC+AGG - chr4_2:44017915-44017934 Msa0601410:intron 50.0%
GCTTCTTCTGTTGGCAACGA+TGG - chr4_2:44017979-44017998 Msa0601410:intron 50.0%
AGCAGCCAAAGCAAAGTCAC+TGG + chr4_2:44018145-44018164 None:intergenic 50.0%
GGAGATGGTATGCAGAGACA+AGG - chr4_2:44018225-44018244 Msa0601410:CDS 50.0%
ATGCAGAGACAAGGAAGACC+TGG - chr4_2:44018234-44018253 Msa0601410:CDS 50.0%
AGAGACAAGGAAGACCTGGA+AGG - chr4_2:44018238-44018257 Msa0601410:CDS 50.0%
ACTTCTCCCTCCCTAATGGA+AGG + chr4_2:44018287-44018306 None:intergenic 50.0%
TCAGACTTCTCCCTCCCTAA+TGG + chr4_2:44018291-44018310 None:intergenic 50.0%
!!! CGCAAGGTTTTGACTCGTGT+AGG - chr4_2:44018486-44018505 Msa0601410:CDS 50.0%
GATGCATCATCCGAGCTGAT+GGG + chr4_2:44019170-44019189 None:intergenic 50.0%
AGATGCATCATCCGAGCTGA+TGG + chr4_2:44019171-44019190 None:intergenic 50.0%
TCTACCCTGTGAACCTTGAG+TGG + chr4_2:44019613-44019632 None:intergenic 50.0%
CTCAAGGTTCACAGGGTAGA+AGG - chr4_2:44019613-44019632 Msa0601410:intron 50.0%
!! CCGACTTGGGTTCATCAAAG+TGG + chr4_2:44019644-44019663 None:intergenic 50.0%
CTTTGATGAACCCAAGTCGG+AGG - chr4_2:44019644-44019663 Msa0601410:intron 50.0%
TGTAGGTGGGAGGAATGACA+AGG - chr4_2:44019668-44019687 Msa0601410:intron 50.0%
ACCGAAAGACCGGGATAGAA+TGG - chr4_2:44019839-44019858 Msa0601410:intron 50.0%
TCCGGTGCTTTGTAAAGGAC+TGG + chr4_2:44019976-44019995 None:intergenic 50.0%
TTCATCTCCCTGCCAAACTC+CGG + chr4_2:44019994-44020013 None:intergenic 50.0%
! CTGCTTGAGTTGCAGAGCAT+TGG - chr4_2:44020152-44020171 Msa0601410:intron 50.0%
ATGGAGCTATTCTCACAGGG+AGG - chr4_2:44020504-44020523 Msa0601410:intron 50.0%
TGGAGCTATTCTCACAGGGA+GGG - chr4_2:44020505-44020524 Msa0601410:intron 50.0%
TATTCTCACAGGGAGGGACA+TGG - chr4_2:44020511-44020530 Msa0601410:intron 50.0%
CAGGGAGGGACATGGAAAAA+CGG - chr4_2:44020519-44020538 Msa0601410:intron 50.0%
!! GGGCTAGTTTCAATGCAGGA+AGG - chr4_2:44021182-44021201 Msa0601410:CDS 50.0%
GCTACTTGCGCATATGACTC+TGG + chr4_2:44021719-44021738 None:intergenic 50.0%
CATATGCGCAAGTAGCCCAT+AGG - chr4_2:44021723-44021742 Msa0601410:intron 50.0%
CCAAAGCCTATTCCCATAGG+TGG + chr4_2:44021933-44021952 None:intergenic 50.0%
CCACCTATGGGAATAGGCTT+TGG - chr4_2:44021930-44021949 Msa0601410:CDS 50.0%
ACCATTCTCGCGTGAATGAG+GGG + chr4_2:44022188-44022207 None:intergenic 50.0%
CACCATTCTCGCGTGAATGA+GGG + chr4_2:44022189-44022208 None:intergenic 50.0%
GTCAGCTGGATTATGCAGAC+AGG - chr4_2:44022557-44022576 Msa0601410:CDS 50.0%
CAGCTGGATTATGCAGACAG+GGG - chr4_2:44022559-44022578 Msa0601410:CDS 50.0%
!! CTGGTCAATGGTGTCGTCAA+TGG - chr4_2:44022676-44022695 Msa0601410:CDS 50.0%
!! GTCGTCAATGGTGTCGTCAA+TGG - chr4_2:44022688-44022707 Msa0601410:CDS 50.0%
!! CTTGACGGTGCTGTTCCTAT+TGG - chr4_2:44022730-44022749 Msa0601410:CDS 50.0%
GAGGGATAGAAATCAGACCC+GGG - chr4_2:44022774-44022793 Msa0601410:five_prime_UTR 50.0%
ATTTGGTCTGGACTGATCCC+GGG + chr4_2:44022794-44022813 None:intergenic 50.0%
! GGCCACAAGATCTTGGTTCT+TGG - chr4_2:44023124-44023143 Msa0601410:intron 50.0%
!! TCACATGGATTCGGTGAACC+TGG - chr4_2:44023296-44023315 Msa0601410:intron 50.0%
!! ATGGATTCGGTGAACCTGGT+GGG - chr4_2:44023300-44023319 Msa0601410:intron 50.0%
GTAACCTGGGTTTCTTGGAG+TGG - chr4_2:44023338-44023357 Msa0601410:intron 50.0%
TTCTCCACTCCAAGAAACCC+AGG + chr4_2:44023345-44023364 None:intergenic 50.0%
GCATTCCTAGGGCATGACTT+TGG + chr4_2:44023616-44023635 None:intergenic 50.0%
GACAGCGCCAAGTGATAACA+TGG + chr4_2:44023728-44023747 None:intergenic 50.0%
GGGAGAGCTAAAGAGGGTTC+TGG - chr4_2:44014112-44014131 Msa0601410:CDS 55.0%
!! GCTCCTGGGCCCATTGATTT+AGG + chr4_2:44014188-44014207 None:intergenic 55.0%
TTAACTCCCCTGAGGCTCCT+GGG + chr4_2:44014202-44014221 None:intergenic 55.0%
TTTAACTCCCCTGAGGCTCC+TGG + chr4_2:44014203-44014222 None:intergenic 55.0%
CAAGCGAATTCGTACCTCGG+TGG - chr4_2:44014968-44014987 Msa0601410:intron 55.0%
TGTTCATTTGCCCTGCTCCC+AGG - chr4_2:44015393-44015412 Msa0601410:intron 55.0%
CTACTTTCCTCCTGGGAGCA+GGG + chr4_2:44015406-44015425 None:intergenic 55.0%
CAGATTACCTGCTGGAGGTG+AGG - chr4_2:44015525-44015544 Msa0601410:intron 55.0%
TCTAATCCCTCACCTCCAGC+AGG + chr4_2:44015535-44015554 None:intergenic 55.0%
AGGAGGTCTGTCGGAACAGT+AGG - chr4_2:44015571-44015590 Msa0601410:intron 55.0%
! TATTGGTGCCCTTCGGATGC+TGG + chr4_2:44015847-44015866 None:intergenic 55.0%
ACCTAGATAAGCCTCCCCTG+GGG - chr4_2:44016284-44016303 Msa0601410:intron 55.0%
AAGGAGGAGCAGATCGGACA+AGG - chr4_2:44016312-44016331 Msa0601410:intron 55.0%
!! GATGGTGGGGAACAGTGTAC+AGG - chr4_2:44016340-44016359 Msa0601410:intron 55.0%
TGGTGGGGAACAGTGTACAG+GGG - chr4_2:44016342-44016361 Msa0601410:intron 55.0%
AGTCGTTCCCTGTTGAGACC+CGG - chr4_2:44016400-44016419 Msa0601410:CDS 55.0%
TCCTATCCCGGGTCTCAACA+GGG + chr4_2:44016410-44016429 None:intergenic 55.0%
TTCCTATCCCGGGTCTCAAC+AGG + chr4_2:44016411-44016430 None:intergenic 55.0%
TGTTGAGACCCGGGATAGGA+AGG - chr4_2:44016410-44016429 Msa0601410:CDS 55.0%
GTTGAGACCCGGGATAGGAA+GGG - chr4_2:44016411-44016430 Msa0601410:CDS 55.0%
! TGTTTGCTGCAGCGAACGTG+CGG + chr4_2:44016472-44016491 None:intergenic 55.0%
! AGCAAGGTGCCTCTCTTCAC+AGG - chr4_2:44017367-44017386 Msa0601410:CDS 55.0%
! GCAAGGTGCCTCTCTTCACA+GGG - chr4_2:44017368-44017387 Msa0601410:CDS 55.0%
GGTATCTCGGGCACCAAGAA+CGG - chr4_2:44017669-44017688 Msa0601410:intron 55.0%
GTATCTCGGGCACCAAGAAC+GGG - chr4_2:44017670-44017689 Msa0601410:intron 55.0%
TGGTCTTTGTCCACCCCACT+GGG + chr4_2:44017851-44017870 None:intergenic 55.0%
ACTTCAAGGTTGCGTGAGGC+AGG + chr4_2:44017913-44017932 None:intergenic 55.0%
GCTTTGGCTGCTGATAGGGA+TGG - chr4_2:44018153-44018172 Msa0601410:intron 55.0%
ACCAGGCCTTCCATTAGGGA+GGG - chr4_2:44018278-44018297 Msa0601410:intron 55.0%
GTAGGGAAGCGGCTGAACAT+TGG - chr4_2:44018504-44018523 Msa0601410:CDS 55.0%
! ACGTGTCTGTCCAGGGGTAT+CGG - chr4_2:44018928-44018947 Msa0601410:intron 55.0%
CGATCATCATCCGATACCCC+TGG + chr4_2:44018941-44018960 None:intergenic 55.0%
!! ACAAAGCACCGGAGTTTGGC+AGG - chr4_2:44019983-44020002 Msa0601410:intron 55.0%
!! CAAAGCACCGGAGTTTGGCA+GGG - chr4_2:44019984-44020003 Msa0601410:intron 55.0%
CACACCCCACCTATGGGAAT+AGG - chr4_2:44021924-44021943 Msa0601410:CDS 55.0%
TCCCCTCATTCACGCGAGAA+TGG - chr4_2:44022184-44022203 Msa0601410:intron 55.0%
GCACCATTCTCGCGTGAATG+AGG + chr4_2:44022190-44022209 None:intergenic 55.0%
GGATTATGCAGACAGGGGAC+TGG - chr4_2:44022564-44022583 Msa0601410:CDS 55.0%
GGGGAAGAAGAGGGAAATGC+TGG - chr4_2:44022657-44022676 Msa0601410:CDS 55.0%
CAATGACAGGCAACCAGCTC+TGG + chr4_2:44022824-44022843 None:intergenic 55.0%
CAGAGCTGGTTGCCTGTCAT+TGG - chr4_2:44022822-44022841 Msa0601410:five_prime_UTR 55.0%
! CTTGACGGGCCACAAGATCT+TGG - chr4_2:44023117-44023136 Msa0601410:intron 55.0%
!! CATGGATTCGGTGAACCTGG+TGG - chr4_2:44023299-44023318 Msa0601410:intron 55.0%
CCTAGGGCATGACTTTGGCA+CGG + chr4_2:44023611-44023630 None:intergenic 55.0%
GGCAAACACTGGGGCAAAGG+TGG + chr4_2:44014056-44014075 None:intergenic 60.0%
AGCGGCAAACACTGGGGCAA+AGG + chr4_2:44014059-44014078 None:intergenic 60.0%
!! AGGGTTCTGGGTGTTCCTCC+TGG - chr4_2:44014125-44014144 Msa0601410:CDS 60.0%
GTACCTCGGTGGCAGACATG+CGG - chr4_2:44014979-44014998 Msa0601410:intron 60.0%
TACCTCGGTGGCAGACATGC+GGG - chr4_2:44014980-44014999 Msa0601410:intron 60.0%
TCATTTGCCCTGCTCCCAGG+AGG - chr4_2:44015396-44015415 Msa0601410:intron 60.0%
CCTACTTTCCTCCTGGGAGC+AGG + chr4_2:44015407-44015426 None:intergenic 60.0%
CCTGCTCCCAGGAGGAAAGT+AGG - chr4_2:44015404-44015423 Msa0601410:intron 60.0%
ACCCCTTGCCAGCATCCGAA+GGG - chr4_2:44015836-44015855 Msa0601410:intron 60.0%
TGCCCTTCGGATGCTGGCAA+GGG + chr4_2:44015841-44015860 None:intergenic 60.0%
TCCCCAGGGGAGGCTTATCT+AGG + chr4_2:44016288-44016307 None:intergenic 60.0%
TAGATAAGCCTCCCCTGGGG+AGG - chr4_2:44016287-44016306 Msa0601410:intron 60.0%
AGATAAGCCTCCCCTGGGGA+GGG - chr4_2:44016288-44016307 Msa0601410:intron 60.0%
GAGGGCAAGGAGGAGCAGAT+CGG - chr4_2:44016306-44016325 Msa0601410:intron 60.0%
GTCGTTCCCTGTTGAGACCC+GGG - chr4_2:44016401-44016420 Msa0601410:CDS 60.0%
TCCCTGTTGAGACCCGGGAT+AGG - chr4_2:44016406-44016425 Msa0601410:CDS 60.0%
! GTTGGGCTAGGGCTGCTTGT+TGG + chr4_2:44017637-44017656 None:intergenic 60.0%
GGAAACTTCCGGCAGGAGAC+TGG + chr4_2:44017726-44017745 None:intergenic 60.0%
TCTCCTGCCGGAAGTTTCCC+AGG - chr4_2:44017727-44017746 Msa0601410:intron 60.0%
CAACCTGGGAAACTTCCGGC+AGG + chr4_2:44017733-44017752 None:intergenic 60.0%
CTGCCGGAAGTTTCCCAGGT+TGG - chr4_2:44017731-44017750 Msa0601410:intron 60.0%
CATCCAATGACCCAGTGGGG+TGG - chr4_2:44017838-44017857 Msa0601410:intron 60.0%
TGTCCACCCCACTGGGTCAT+TGG + chr4_2:44017844-44017863 None:intergenic 60.0%
GTGGTCTTTGTCCACCCCAC+TGG + chr4_2:44017852-44017871 None:intergenic 60.0%
GACCAGGCCTTCCATTAGGG+AGG - chr4_2:44018277-44018296 Msa0601410:CDS 60.0%
TCCCTCCCTAATGGAAGGCC+TGG + chr4_2:44018282-44018301 None:intergenic 60.0%
GAACCCAAGTCGGAGGCTGT+AGG - chr4_2:44019651-44019670 Msa0601410:intron 60.0%
CCACCTACAGCCTCCGACTT+GGG + chr4_2:44019657-44019676 None:intergenic 60.0%
CCAAGTCGGAGGCTGTAGGT+GGG - chr4_2:44019655-44019674 Msa0601410:intron 60.0%
!! CCACAGGGATGAGGGTGCTA+CGG - chr4_2:44021125-44021144 Msa0601410:CDS 60.0%
!! AGGGATGAGGGTGCTACGGT+TGG - chr4_2:44021129-44021148 Msa0601410:CDS 60.0%
ACGCGAGAATGGTGCACGAC+AGG - chr4_2:44022195-44022214 Msa0601410:intron 60.0%
TCACGGTCTTGATGCCCACC+AGG + chr4_2:44023317-44023336 None:intergenic 60.0%
CCGTGCCAAAGTCATGCCCT+AGG - chr4_2:44023608-44023627 Msa0601410:intron 60.0%
TCACTTGGCGCTGTCTACGG+TGG - chr4_2:44023733-44023752 Msa0601410:intron 60.0%
CACTTGGCGCTGTCTACGGT+GGG - chr4_2:44023734-44023753 Msa0601410:intron 60.0%
CGACACTGACACGTCGGCAC+CGG - chr4_2:44013194-44013213 Msa0601410:three_prime_UTR 65.0%
TCAATGGGCCCAGGAGCCTC+AGG - chr4_2:44014191-44014210 Msa0601410:CDS 65.0%
CAATGGGCCCAGGAGCCTCA+GGG - chr4_2:44014192-44014211 Msa0601410:CDS 65.0%
AATGGGCCCAGGAGCCTCAG+GGG - chr4_2:44014193-44014212 Msa0601410:CDS 65.0%
TACCCGCATGTCTGCCACCG+AGG + chr4_2:44014985-44015004 None:intergenic 65.0%
CACCCCTTGCCAGCATCCGA+AGG - chr4_2:44015835-44015854 Msa0601410:intron 65.0%
GCCCTTCGGATGCTGGCAAG+GGG + chr4_2:44015840-44015859 None:intergenic 65.0%
GTGCCCTTCGGATGCTGGCA+AGG + chr4_2:44015842-44015861 None:intergenic 65.0%
CCCAAGTCGGAGGCTGTAGG+TGG - chr4_2:44019654-44019673 Msa0601410:intron 65.0%
CCCACCTACAGCCTCCGACT+TGG + chr4_2:44019658-44019677 None:intergenic 65.0%
AGTCGGAGGCTGTAGGTGGG+AGG - chr4_2:44019658-44019677 Msa0601410:intron 65.0%
CCGTAGCACCCTCATCCCTG+TGG + chr4_2:44021128-44021147 None:intergenic 65.0%
CTCCTCCTTGCCCTCCCCAG+GGG + chr4_2:44016301-44016320 None:intergenic 70.0%
GCTCCTCCTTGCCCTCCCCA+GGG + chr4_2:44016302-44016321 None:intergenic 70.0%
TGCTCCTCCTTGCCCTCCCC+AGG + chr4_2:44016303-44016322 None:intergenic 70.0%
AGCCTCCCCTGGGGAGGGCA+AGG - chr4_2:44016293-44016312 Msa0601410:intron 75.0%
CTCCTTGCCCTCCCCAGGGG+AGG + chr4_2:44016298-44016317 None:intergenic 75.0%
CTCCCCTGGGGAGGGCAAGG+AGG - chr4_2:44016296-44016315 Msa0601410:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 44012906 44023839 44012906 ID=Msa0601410;Name=Msa0601410
chr4_2 mRNA 44012906 44023839 44012906 ID=Msa0601410-mRNA-1;Parent=Msa0601410;Name=Msa0601410-mRNA-1;_AED=0.06;_eAED=0.06;_QI=171|1|1|1|0.87|0.94|17|597|1243
chr4_2 exon 44012906 44014221 44012906 ID=Msa0601410-mRNA-1:exon:9690;Parent=Msa0601410-mRNA-1
chr4_2 exon 44014453 44014717 44014453 ID=Msa0601410-mRNA-1:exon:9689;Parent=Msa0601410-mRNA-1
chr4_2 exon 44015968 44016025 44015968 ID=Msa0601410-mRNA-1:exon:9688;Parent=Msa0601410-mRNA-1
chr4_2 exon 44016205 44016275 44016205 ID=Msa0601410-mRNA-1:exon:9687;Parent=Msa0601410-mRNA-1
chr4_2 exon 44016382 44016453 44016382 ID=Msa0601410-mRNA-1:exon:9686;Parent=Msa0601410-mRNA-1
chr4_2 exon 44016552 44017157 44016552 ID=Msa0601410-mRNA-1:exon:9685;Parent=Msa0601410-mRNA-1
chr4_2 exon 44017355 44017420 44017355 ID=Msa0601410-mRNA-1:exon:9684;Parent=Msa0601410-mRNA-1
chr4_2 exon 44017540 44017625 44017540 ID=Msa0601410-mRNA-1:exon:9683;Parent=Msa0601410-mRNA-1
chr4_2 exon 44017741 44017803 44017741 ID=Msa0601410-mRNA-1:exon:9682;Parent=Msa0601410-mRNA-1
chr4_2 exon 44018196 44018296 44018196 ID=Msa0601410-mRNA-1:exon:9681;Parent=Msa0601410-mRNA-1
chr4_2 exon 44018378 44018918 44018378 ID=Msa0601410-mRNA-1:exon:9680;Parent=Msa0601410-mRNA-1
chr4_2 exon 44018997 44019130 44018997 ID=Msa0601410-mRNA-1:exon:9679;Parent=Msa0601410-mRNA-1
chr4_2 exon 44019312 44019470 44019312 ID=Msa0601410-mRNA-1:exon:9678;Parent=Msa0601410-mRNA-1
chr4_2 exon 44021053 44021330 44021053 ID=Msa0601410-mRNA-1:exon:9677;Parent=Msa0601410-mRNA-1
chr4_2 exon 44021744 44021981 44021744 ID=Msa0601410-mRNA-1:exon:9676;Parent=Msa0601410-mRNA-1
chr4_2 exon 44022481 44022845 44022481 ID=Msa0601410-mRNA-1:exon:9675;Parent=Msa0601410-mRNA-1
chr4_2 exon 44023759 44023839 44023759 ID=Msa0601410-mRNA-1:exon:9674;Parent=Msa0601410-mRNA-1
chr4_2 five_prime_UTR 44023759 44023839 44023759 ID=Msa0601410-mRNA-1:five_prime_utr;Parent=Msa0601410-mRNA-1
chr4_2 five_prime_UTR 44022756 44022845 44022756 ID=Msa0601410-mRNA-1:five_prime_utr;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44022481 44022755 44022481 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44021744 44021981 44021744 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44021053 44021330 44021053 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44019312 44019470 44019312 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44018997 44019130 44018997 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44018378 44018918 44018378 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44018196 44018296 44018196 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44017741 44017803 44017741 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44017540 44017625 44017540 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44017355 44017420 44017355 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44016552 44017157 44016552 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44016382 44016453 44016382 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44016205 44016275 44016205 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44015968 44016025 44015968 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44014453 44014717 44014453 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 CDS 44013503 44014221 44013503 ID=Msa0601410-mRNA-1:cds;Parent=Msa0601410-mRNA-1
chr4_2 three_prime_UTR 44012906 44013502 44012906 ID=Msa0601410-mRNA-1:three_prime_utr;Parent=Msa0601410-mRNA-1
Gene Sequence

>Msa0601410

ATGTTGAGTTCTGTGAGTAACTTAAACGGCAGCAGCACAAGTGGGATAACTTCATCGGATATGCCACCTTTGCCCCAGTGTTTGCCGCTAGATTTGATCACTGTAGGAAATAAAAAATATACGGGAGAGCTAAAGAGGGTTCTGGGTGTTCCTCCTGGAAACACCTCAGAAGACCATTCTTTTGGAGTTCCACATCCTAAATCAATGGGCCCAGGAGCCTCAGGGGAGTTAAAACACATAAAGGAAAGTGTTCAAGATGCCTCCAAAAAGGCTAGGGATAGATCAAAAATGCTTGAGGAAAATATATCTAAATTGGATGGGTATACGGAGGCCTTAAACTCAAAGAAGCGACAAAGGAATGATTTATCAAGTGAAAGGGGGAGTGGAGTAAAGTTAACAAAGATGGGAAGCCAGATTCACAAAATCCCAAATGATAATATGACTCCAAGAGAAGTCAAGACCCCAAAATCAATGCTGAACAAGCGAATTCGTACCTCGGTGGCAGACATGCGGGAGGAAAGTAGGTCTGCTTCTATCGGAAGACAGCAGATGCTCACTGAGAAGGATGGAAATCTGATTCAGACACTTAGTGGGGGCTCTGTTCGAACTGAAGATAAAACATGCAGATTACCTGCTGGAGGTGAGGGATTAGATCAAAAAATAAAGAAGAGGAGGTCTGTCGGAACAGTAGGAAACAGAGTTATAACTGGTGAGAGGGACATAAAACGAGCTACCCTTCCAAATGGAAATGCTGATTTGAAGATGCGATTTAATGATGCTCAGGGTTTCAGATTGAAGTCAATTCCTGGATCTATTGGAATCAACAAATCTGAGGGCTCTTCAGAGCCTAATATCACAGGTGTGCGTGTGATGCTTACAGATGAGCAAGGTGCCTCTCTTCACAGGGAAAACATAGCTGACCAGAGCGTTGTAGCAAAAGGAAACAACAGAGCAAACACTCAAGAGGAGCCAACAAGCAGCCCTAGCCCAACAATTAAAAACAAGGTATCTCGGGCACCAAGAACGGGTTCAGTTAGTGCGCTAGAGTTGTCTAACATCCAGTCTCCTGCCGGAAGTTTCCCAGGTTCTTCTATACATCCAATGACCCAGTGGGGTGGACAAAGACCACCTAAAAATTCACGCACACGAAGAGTGAAAGTAGTTTCTCCTGCCTCACGCAACCTTGAAGTTCAGGTCTCATCTGAAGGCTGTCTAACTTCTGATTTCAATGTTAAAGCTTCTTCTGTTGGCAACGATGGGTTCCCACTAGCTAGCAGTGTAGACAACAGTACACCAAAATACAAAAGACCACCAGATGATATTTTTTCTCCCTTTGGATTATCTGAAAGTGAAGAATCTGGTGCTGGTGAAAACAAAATAAAAGAGAAAGGGGTGAATGCCAGTGACTTTGCTTTGGCTGCTGATAGGGATGGATCTCCTCTGTTACAAATGAGGAAGAATAAAATGCCAAGAGATGAATCAGGAGATGGTATGCAGAGACAAGGAAGACCTGGAAGGAATTTATCGTCAATAAGACCAGGCCTTCCATTAGGGAGGGAGAAGTCTGAGAATGTACCTATACTGAAGCCAGTTCAGGAAACAAGGCCTAATGATAAGAATAAAACCAAATATGGGCGTCCTCCTTCAAAAAACCAGAAAGAACGCAAGGTTTTGACTCGTGTAGGGAAGCGGCTGAACATTGGTTCTCCTGATTTTGGAGGTAGTGGGGTATCGGATGATGATCGTGAAGAATTGTATAAAGCTGCTAATGCTGCTCTTAATGCAAGCACTTTTGCTTCAGGTCCATTTTGGAGTAAAATGGAGTGTATTTTTACTCCCATCAGCTCGGATGATGCATCTTTTGTGAAGGAACAGCTCAATATTGCTGACGATTTGGAGAAAAGTTCATCTCATATGTTTGCCATTGATCATGATACGTTGGGTGTTGTTATAAATAATAAAACCACTCAAGGTTCACAGGGTAGAAGGAGAAGCCACTTTGATGAACCCAAGTCGGAGGCTGTAGGTGGGAGGAATGACAAGGTTACCCCATTATTCCAAAGACTTCTTTGTGCTCTAATTGAAGAAGACGAAAATGAAGAATCATACCAGCAAAGTGAAGCAAAGAATATATCTAGACAGTGTGCTAGTGATGATTCTCACTGTGGTTCTTGTAATCAAGTCGATTTTGAACCGAAAGACCGGGATAGAATGGAATCTGAAGTTGAATCGGAGGTGGATTTCCATATTCAGAAGAATTGCATATTGGACAGACTATCTTGCGATAAGAGTACTGCATCGAACACATTTAGGTACCCAGACACATCCAGTCCTTTACAAAGCACCGGAGTTTGGCAGGGAGATGAAGAATTGTCCATCTCTGATATCACTCACACCAGTGAAATATGTTCAAATGATCTTGATCAACTGCAACCTGAATTATATAATCCTAGTTTTCCTTCTCCTGATGGTGACTATCAGCTTATGTCTCTGGATGACAGACTGCTGCTTGAGTTGCAGAGCATTGGTTTATATCCAGAAATAATGCCTGATTTAGCAGAGCAAGATGAAGTTATAATTCAAGATATTGTGGAACTTGAGAAAGCTCTATATGAACAGAATGGAAGGAAGAAGAGAAACTTGGACAAAATTGATGGAGCTATTCTCACAGGGAGGGACATGGAAAAACGGAAGATTGAGCAAGCTGCATTTGACCAACTTACCGAAATGGCTTACAGAAAGAGATTGGCATGCCGTGAAAGCAGAAATTCAAAAAGCACTGTTCAGAAGGTTTCAACACAAGTTGCTTTGGCTTTTATTAAACGTACTCTTGCAAGATGTAGAAGATATGAAGAAGCTGGCGTTAGCTGCTTTAGTGAACCGACTCTCCAAAATATAATGTTTTCCCCTCATTCACGCGAGAATGGTGCACGACAGGCAGATTGCATTGTTTCTGGCACAGCCAGTAATACATGTAGCAAAGCTTTGCATCAAATTGAAGCGAGAAAATTAGGTGCTGTTTCGAGTGCTTCTGAGAAATATGATAGTCAGCTGGATTATGCAGACAGGGGACTGGTTGATTCTTTTCAAAGTTCAATCCACTCATCAGAACAATTGTTATCCCAGAATGGGTCTGTGATGATCAAGGGGAAGAAGAGGGAAATGCTGGTCAATGGTGTCGTCAATGGTGTCGTCAATGGTTCTTCAAGAACATCAAATCTTGACGGTGCTGTTCCTATTGGAGTCAAAGGAAAGAGAAGTGAGAGGGATAGAAATCAGACCCGGGATCAGTCCAGACCAAATTCTAATTCCAGAGCTGGTTGCCTGTCATTGGACAGTAACAAAAATGAGAACAAGCCAAAAGCTAAGCCAAAGCAAAAAAGTACTGCTGCTGGACATGATAGATTCATGGAAGCAAAGGAATCTGTGTGTATACCTATTTATGATTCTAGTCTATCTGTGGCTAATGCAAGCAACAATGGCAGTAAAGACGGGGCATCATTATCTGGTAACCAGGACACTTCTCAAGTAAAGGAATCCACTGACTTGGAGAATTTGCCACTACCTGATTTAAGTTCAATAGACGAATTTGGTGTATCTGGTGAACTTGACGGGCCACAAGATCTTGGTTCTTGGCTGAACTTTGATGACGATGGTTTGCAAGAACATGATTGTATTATGGGCCTTGAAATTCCAATGGACGACCTATCGGAATTGAATATGCTTATGTGA
Protein sequence

>Msa0601410

MLSSVSNLNGSSTSGITSSDMPPLPQCLPLDLITVGNKKYTGELKRVLGVPPGNTSEDHSFGVPHPKSMGPGASGELKHIKESVQDASKKARDRSKMLEENISKLDGYTEALNSKKRQRNDLSSERGSGVKLTKMGSQIHKIPNDNMTPREVKTPKSMLNKRIRTSVADMREESRSASIGRQQMLTEKDGNLIQTLSGGSVRTEDKTCRLPAGGEGLDQKIKKRRSVGTVGNRVITGERDIKRATLPNGNADLKMRFNDAQGFRLKSIPGSIGINKSEGSSEPNITGVRVMLTDEQGASLHRENIADQSVVAKGNNRANTQEEPTSSPSPTIKNKVSRAPRTGSVSALELSNIQSPAGSFPGSSIHPMTQWGGQRPPKNSRTRRVKVVSPASRNLEVQVSSEGCLTSDFNVKASSVGNDGFPLASSVDNSTPKYKRPPDDIFSPFGLSESEESGAGENKIKEKGVNASDFALAADRDGSPLLQMRKNKMPRDESGDGMQRQGRPGRNLSSIRPGLPLGREKSENVPILKPVQETRPNDKNKTKYGRPPSKNQKERKVLTRVGKRLNIGSPDFGGSGVSDDDREELYKAANAALNASTFASGPFWSKMECIFTPISSDDASFVKEQLNIADDLEKSSSHMFAIDHDTLGVVINNKTTQGSQGRRRSHFDEPKSEAVGGRNDKVTPLFQRLLCALIEEDENEESYQQSEAKNISRQCASDDSHCGSCNQVDFEPKDRDRMESEVESEVDFHIQKNCILDRLSCDKSTASNTFRYPDTSSPLQSTGVWQGDEELSISDITHTSEICSNDLDQLQPELYNPSFPSPDGDYQLMSLDDRLLLELQSIGLYPEIMPDLAEQDEVIIQDIVELEKALYEQNGRKKRNLDKIDGAILTGRDMEKRKIEQAAFDQLTEMAYRKRLACRESRNSKSTVQKVSTQVALAFIKRTLARCRRYEEAGVSCFSEPTLQNIMFSPHSRENGARQADCIVSGTASNTCSKALHQIEARKLGAVSSASEKYDSQLDYADRGLVDSFQSSIHSSEQLLSQNGSVMIKGKKREMLVNGVVNGVVNGSSRTSNLDGAVPIGVKGKRSERDRNQTRDQSRPNSNSRAGCLSLDSNKNENKPKAKPKQKSTAAGHDRFMEAKESVCIPIYDSSLSVANASNNGSKDGASLSGNQDTSQVKESTDLENLPLPDLSSIDEFGVSGELDGPQDLGSWLNFDDDGLQEHDCIMGLEIPMDDLSELNMLM*