AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0867890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867890 MtrunA17_Chr2g0281051 96.369 964 29 4 1 959 1 963 0.0 1911
Msa0867890 MtrunA17_Chr4g0048531 63.978 558 171 7 423 953 725 1279 0.0 714
Msa0867890 MtrunA17_Chr4g0048531 50.000 508 180 12 1 442 1 500 6.14e-127 415
Msa0867890 MtrunA17_Chr7g0275771 35.951 815 443 20 198 953 133 927 2.98e-156 484
Msa0867890 MtrunA17_Chr1g0192011 30.372 968 564 25 12 957 88 967 2.56e-134 428
Msa0867890 MtrunA17_Chr1g0211711 34.980 749 425 15 205 942 343 1040 9.67e-131 421
Msa0867890 MtrunA17_Chr4g0075261 33.460 792 439 18 180 952 144 866 5.05e-128 408
Msa0867890 MtrunA17_Chr1g0183311 35.045 779 440 17 205 955 144 884 4.65e-121 390
Msa0867890 MtrunA17_Chr2g0289121 32.938 759 403 18 203 949 154 818 2.13e-105 347
Msa0867890 MtrunA17_Chr5g0420361 35.441 680 378 22 287 949 157 792 5.27e-99 329
Msa0867890 MtrunA17_Chr1g0211661 33.475 705 389 16 205 893 225 865 5.96e-97 325
Msa0867890 MtrunA17_Chr6g0472441 32.344 674 369 19 287 939 99 706 8.46e-86 291
Msa0867890 MtrunA17_Chr1g0147021 33.658 514 291 14 198 698 863 1339 3.81e-80 286
Msa0867890 MtrunA17_Chr1g0147021 47.594 187 83 1 766 952 1526 1697 4.30e-49 190
Msa0867890 MtrunA17_Chr1g0211691 32.612 647 361 20 205 830 342 934 1.92e-74 264
Msa0867890 MtrunA17_Chr5g0426961 33.208 530 321 14 205 715 140 655 3.62e-73 258
Msa0867890 MtrunA17_Chr5g0426961 49.664 149 75 0 806 954 688 836 1.61e-41 164
Msa0867890 MtrunA17_Chr2g0289031 32.952 437 227 6 523 954 22 397 7.85e-66 226
Msa0867890 MtrunA17_Chr5g0448301 31.325 581 310 17 294 863 129 631 3.00e-59 214
Msa0867890 MtrunA17_Chr1g0211701 51.429 105 51 0 838 942 3 107 2.39e-33 126
Msa0867890 MtrunA17_Chr2g0289091 50.000 110 55 0 806 915 311 420 2.05e-28 119
Msa0867890 MtrunA17_Chr2g0289091 37.778 135 81 2 579 711 20 153 4.74e-17 84.7
Msa0867890 MtrunA17_Chr2g0289041 34.101 217 123 7 226 435 1 204 2.10e-25 105
Msa0867890 MtrunA17_Chr8g0361391 51.020 98 46 2 796 893 42 137 7.66e-25 102
Msa0867890 MtrunA17_Chr8g0361381 32.701 211 134 4 486 693 7 212 1.02e-22 97.4
Msa0867890 MtrunA17_Chr7g0231061 39.286 112 65 2 605 714 48 158 1.64e-15 76.3
Msa0867890 MtrunA17_Chr8g0364421 27.016 248 140 8 315 556 5 217 6.50e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867890 AT4G21430.1 38.454 996 487 23 6 955 2 917 0.0 619
Msa0867890 AT4G00990.1 36.030 791 438 19 198 952 73 831 2.92e-149 463
Msa0867890 AT1G62310.1 35.316 790 413 17 170 939 172 883 2.03e-137 434
Msa0867890 AT4G00990.2 35.479 730 403 19 198 891 73 770 2.34e-128 407
Msa0867890 AT4G00990.3 35.479 730 403 19 198 891 73 770 2.85e-128 406
Msa0867890 AT1G09060.4 29.877 974 554 28 12 957 39 911 6.47e-117 381
Msa0867890 AT1G09060.3 29.877 974 554 28 12 957 39 911 6.47e-117 381
Msa0867890 AT1G09060.2 29.877 974 554 28 12 957 25 897 6.70e-117 380
Msa0867890 AT1G09060.1 29.877 974 554 28 12 957 25 897 6.70e-117 380
Msa0867890 AT1G11950.2 34.686 542 330 11 205 740 193 716 3.80e-87 297
Msa0867890 AT1G11950.2 57.500 80 34 0 804 883 722 801 3.62e-20 97.1
Msa0867890 AT1G11950.1 34.686 542 330 11 205 740 193 716 4.99e-87 298
Msa0867890 AT1G11950.1 53.691 149 69 0 804 952 722 870 6.75e-45 175
Msa0867890 AT1G11950.3 34.686 542 330 11 205 740 193 716 4.99e-87 298
Msa0867890 AT1G11950.3 53.691 149 69 0 804 952 722 870 6.75e-45 175
Msa0867890 AT3G07610.1 35.171 526 266 10 435 949 429 890 5.54e-87 301
Msa0867890 AT3G07610.1 31.515 165 110 3 205 368 155 317 2.40e-18 91.3
Msa0867890 AT3G07610.3 34.470 528 289 11 435 949 429 912 6.40e-82 287
Msa0867890 AT3G07610.3 31.515 165 110 3 205 368 155 317 2.27e-18 91.3
Msa0867890 AT3G07610.2 33.692 279 163 7 435 699 429 699 9.88e-37 149
Msa0867890 AT3G07610.2 31.515 165 110 3 205 368 155 317 7.99e-18 89.4

Find 174 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGAAGTTCCTGAAATTT+TGG 0.135711 6_1:+1139750 Msa0867890:CDS
TCTAGATCAGAGCATCTTTC+TGG 0.167659 6_1:+1141898 Msa0867890:CDS
GTGATTCCAGGTTAATATTA+TGG 0.205887 6_1:+1141333 Msa0867890:intron
GTATTTGATATATATTTATA+TGG 0.228674 6_1:-1137203 None:intergenic
TATTTATTTATTTCAGATTC+AGG 0.243459 6_1:-1142855 None:intergenic
ATATATATTTATATGGGATT+TGG 0.250174 6_1:-1137196 None:intergenic
TTCTGCACATTCTTCTTATT+CGG 0.285729 6_1:-1137711 None:intergenic
GACCCTTCTATCAACATTCT+TGG 0.288257 6_1:-1137913 None:intergenic
AGACTTACTTGAAGCTTGTT+TGG 0.301685 6_1:+1140062 Msa0867890:CDS
CCATATGTATACATTTCTTA+TGG 0.304239 6_1:+1140612 Msa0867890:CDS
TAGCAAGTTCAATCATGTTT+TGG 0.316293 6_1:-1142657 None:intergenic
GACTGAGTTACCTGACAAAA+TGG 0.323753 6_1:+1139492 Msa0867890:CDS
AAATGCTCTTGTCTTCTAAA+AGG 0.324737 6_1:-1139540 None:intergenic
ATTTCTTCGATCCAGCTTAT+CGG 0.342412 6_1:-1139697 None:intergenic
CATGAGACGCTGAAACTAAA+TGG 0.343510 6_1:+1140432 Msa0867890:CDS
TTGTTACACCACCTTACTTC+AGG 0.344307 6_1:+1137889 Msa0867890:CDS
GAAACTGTTCTTTGAATAGT+TGG 0.351565 6_1:-1140467 None:intergenic
GGCTCTTCATAGCATGGATA+TGG 0.356860 6_1:+1142602 Msa0867890:CDS
TTGCTCAGTGGGATGTCTTC+CGG 0.358224 6_1:+1141692 Msa0867890:CDS
AAGATGCTCTGATCTAGAAT+TGG 0.360917 6_1:-1141893 None:intergenic
ATGAAAACAGGTGAAGAAAA+TGG 0.371127 6_1:+1142581 Msa0867890:intron
TTTGGTCTGTATGCTCCTTC+CGG 0.375126 6_1:+1139038 Msa0867890:CDS
AGAATTGCCCAATGGGGTTA+TGG 0.377287 6_1:+1137791 Msa0867890:CDS
GACGTTTGCACCGCCATTGT+CGG 0.389619 6_1:-1137434 None:intergenic
CTGGATGTCCATACCAGATT+AGG 0.389865 6_1:+1142096 Msa0867890:CDS
GGTCCAAGAATGTTGATAGA+AGG 0.390687 6_1:+1137910 Msa0867890:CDS
GATATCAGACCTTACTTTCA+CGG 0.390688 6_1:-1138881 None:intergenic
AACTGATACGTCAATGTTGC+TGG 0.394642 6_1:+1139576 Msa0867890:CDS
GAACAAGTTCCTCGACAAAC+TGG 0.395372 6_1:-1138825 None:intergenic
ATGAGACTGAAGGAGGAGTT+TGG 0.403179 6_1:+1141935 Msa0867890:CDS
CCATAAGAAATGTATACATA+TGG 0.404527 6_1:-1140612 None:intergenic
AGACCTTAGAATTCCTAATC+TGG 0.404706 6_1:-1142109 None:intergenic
CTCTGAAGCTTCAACGACTC+TGG 0.404970 6_1:-1137531 None:intergenic
CGATGCTGTTGATGTGCAAT+TGG 0.407019 6_1:+1137641 Msa0867890:CDS
TACTTGAAGCTTGTTTGGAT+TGG 0.411244 6_1:+1140067 Msa0867890:CDS
ACGTCGTTGAGGTTGAAATT+AGG 0.411680 6_1:+1137586 Msa0867890:CDS
TGCAGAAGACGCGGAACAAA+AGG 0.411789 6_1:+1141459 Msa0867890:CDS
GCAGAATGTTGATGAAGAAT+TGG 0.414276 6_1:+1137728 Msa0867890:CDS
TATTTGATATATATTTATAT+GGG 0.415608 6_1:-1137202 None:intergenic
AGAACCACATTCTCCATTGC+TGG 0.416045 6_1:-1141596 None:intergenic
GATGGATCTCATCGGTCAAT+TGG 0.419978 6_1:-1142409 None:intergenic
GGAGAATTTATATGCTCAAA+GGG 0.425573 6_1:-1139466 None:intergenic
TCACGACGTGAAGTCGAAAC+AGG 0.425913 6_1:-1137822 None:intergenic
TTTACTGTAGATACTTCAAT+TGG 0.428309 6_1:+1142779 Msa0867890:three_prime_UTR
CCTTCAGAGCTAGGTGGTTG+TGG 0.433804 6_1:+1139643 Msa0867890:CDS
CCCACTTGAAAATTATCATA+AGG 0.434928 6_1:-1137936 None:intergenic
GATAAGCTGGATCGAAGAAA+TGG 0.436682 6_1:+1139699 Msa0867890:CDS
TTGAGGTATTCTAAAAGCTT+CGG 0.437209 6_1:-1141727 None:intergenic
CAACGAGTATGACAGCAATA+AGG 0.437898 6_1:+1141777 Msa0867890:CDS
TGTTGATGAAGAATTGGAAT+TGG 0.439901 6_1:+1137734 Msa0867890:CDS
TTGAAGCTTGTTTGGATTGG+TGG 0.446072 6_1:+1140070 Msa0867890:CDS
AGCAATGGAGAATGTGGTTC+TGG 0.446783 6_1:+1141598 Msa0867890:CDS
GCACAGAACTCTGTGTCAAA+GGG 0.448957 6_1:+1141420 Msa0867890:CDS
TGTTCTGTGCTTATCTTGAA+AGG 0.451673 6_1:+1140013 Msa0867890:CDS
TGAGGAAAGAATTGCCCAAT+GGG 0.453383 6_1:+1137784 Msa0867890:CDS
AGAGCAGCAATACATGATAA+AGG 0.454792 6_1:+1140588 Msa0867890:CDS
GCCATTGTCGGCCGTCGGTA+CGG 0.461722 6_1:-1137422 None:intergenic
AATGTCCACCGGACCATCTC+CGG 0.464613 6_1:+1137394 Msa0867890:CDS
TTGTAACAGGATTGTTTGGC+TGG 0.465255 6_1:+1138979 Msa0867890:intron
GTATTGTGTTCAAGTGGTAT+TGG 0.466768 6_1:+1142352 Msa0867890:intron
ATACCAGATTAGGAATTCTA+AGG 0.467888 6_1:+1142106 Msa0867890:CDS
TTGTCAGGTAACTCAGTCAA+TGG 0.467994 6_1:-1139487 None:intergenic
CTGTTTCTAGCTCTGCATGC+TGG 0.468543 6_1:-1139083 None:intergenic
GTGTAAAGACCGTGAAAGTA+AGG 0.471686 6_1:+1138872 Msa0867890:CDS
GCAATTTCCATAACCCCATT+GGG 0.475334 6_1:-1137798 None:intergenic
AGATGCTCTGATCTAGAATT+GGG 0.475458 6_1:-1141892 None:intergenic
AGCAATTTCCATAACCCCAT+TGG 0.477634 6_1:-1137799 None:intergenic
CCTTCGCTTACAATACTCTC+TGG 0.479033 6_1:-1141484 None:intergenic
CAGTGCTTTGATCTGTCTTG+TGG 0.480515 6_1:-1141657 None:intergenic
CGGCTGCACCGGAGATGGTC+CGG 0.480955 6_1:-1137402 None:intergenic
GTAGGAGGAAGAAGTGTCAT+TGG 0.481387 6_1:+1138084 Msa0867890:CDS
ATAGACTGTAGGAACAGTTA+AGG 0.484995 6_1:-1139408 None:intergenic
TTAGAATTCCTAATCTGGTA+TGG 0.487915 6_1:-1142104 None:intergenic
CCACTTGAAAATTATCATAA+GGG 0.488219 6_1:-1137935 None:intergenic
AAAACTAAGTTGGGATCCTC+TGG 0.488482 6_1:+1139987 Msa0867890:CDS
TCTGAGATATAGAAAAGAAA+AGG 0.490747 6_1:-1137255 None:intergenic
GGCCGTCGGTACGGCTGCAC+CGG 0.494483 6_1:-1137413 None:intergenic
TGTGGTTCTCTGGAAGCAGA+TGG 0.496122 6_1:-1142427 None:intergenic
AAACTGTTCTTTGAATAGTT+GGG 0.497020 6_1:-1140466 None:intergenic
AGCACAGAACTCTGTGTCAA+AGG 0.497022 6_1:+1141419 Msa0867890:CDS
TCATGCCCTCCTTCAGAGCT+AGG 0.498248 6_1:+1139634 Msa0867890:CDS
GTGGGATGTCTTCCGGAGAC+AGG 0.500947 6_1:+1141699 Msa0867890:CDS
CTTATTGCTGTCATACTCGT+TGG 0.501448 6_1:-1141776 None:intergenic
TGAAGCTTGTTTGGATTGGT+GGG 0.502278 6_1:+1140071 Msa0867890:CDS
GAATACATGAATCCGAGGTT+CGG 0.506022 6_1:+1140531 Msa0867890:CDS
AATGTATTCTGTTGCTCAGT+GGG 0.508686 6_1:+1141681 Msa0867890:CDS
GTAAGATGTTCTGTAGAGAC+AGG 0.508727 6_1:-1141373 None:intergenic
TCGTACTTCGGAGCACGTCT+CGG 0.510020 6_1:-1139963 None:intergenic
CACTCAAAATGAGGTTAAGA+AGG 0.510187 6_1:+1138797 Msa0867890:CDS
CATAAGAAATGTATACATAT+GGG 0.512294 6_1:-1140611 None:intergenic
GGTCTTTACACTGACTTGCT+CGG 0.516495 6_1:-1138860 None:intergenic
CTTCTGTGAAGATTCAGAAT+AGG 0.519354 6_1:-1139382 None:intergenic
AAGAATGGTGTTACAGAGAG+AGG 0.520069 6_1:+1137671 Msa0867890:CDS
ACATTCTTGGACCTGAAGTA+AGG 0.520627 6_1:-1137900 None:intergenic
GCAATTGGATTTGATAAGAA+TGG 0.521348 6_1:+1137656 Msa0867890:CDS
GAAGCTATCATCATTCCTGC+TGG 0.521605 6_1:+1142077 Msa0867890:CDS
CTGGTACAAGCAGAGTTGAT+AGG 0.525136 6_1:+1138998 Msa0867890:CDS
GTATTTCGACACTCAAAATG+AGG 0.531795 6_1:+1138788 Msa0867890:CDS
ATCATCTTCAACTTCAACAT+CGG 0.533036 6_1:+1137490 Msa0867890:CDS
CGGTACGGCTGCACCGGAGA+TGG 0.535565 6_1:-1137407 None:intergenic
TGGAGAATTTATATGCTCAA+AGG 0.536643 6_1:-1139467 None:intergenic
ATTACTTCAGCAAAATGAGC+TGG 0.538244 6_1:-1140489 None:intergenic
CCACAACCACCTAGCTCTGA+AGG 0.546033 6_1:-1139643 None:intergenic
ATTTATTTCAGATTCAGGTA+AGG 0.547813 6_1:-1142850 None:intergenic
AGCACGTCTCGGACTACTAC+AGG 0.549686 6_1:-1139952 None:intergenic
GCTTCGGTACATCCTGTCTC+CGG 0.550177 6_1:-1141711 None:intergenic
GAGAACAATACTTCCAGCAA+TGG 0.551966 6_1:+1141583 Msa0867890:CDS
GGATTCATGTATTCTTGAAG+TGG 0.553713 6_1:-1140522 None:intergenic
GAAAATGGCTCTTCATAGCA+TGG 0.555007 6_1:+1142596 Msa0867890:CDS
GAAGCAAAACGACGTCGTTG+AGG 0.556259 6_1:+1137575 Msa0867890:CDS
CTCCGGTGCAGCCGTACCGA+CGG 0.558644 6_1:+1137411 Msa0867890:CDS
TCAATGTTGCTGGATTCGAC+TGG 0.558744 6_1:+1139586 Msa0867890:CDS
GTCCAAGAATGTTGATAGAA+GGG 0.559262 6_1:+1137911 Msa0867890:CDS
TGGACGTTTGAGCAACATGT+TGG 0.562317 6_1:+1142053 Msa0867890:CDS
GCACCGCCATTGTCGGCCGT+CGG 0.566484 6_1:-1137427 None:intergenic
TAGAATACCTCAAAAGACAC+AGG 0.568733 6_1:+1141737 Msa0867890:CDS
ATTATAGTGAAGGTGAATTG+AGG 0.570035 6_1:+1137766 Msa0867890:CDS
GATCGAAGAAATGGAAGCTA+AGG 0.571565 6_1:+1139708 Msa0867890:CDS
ATCTGGTATGGACATCCAGC+AGG 0.572299 6_1:-1142092 None:intergenic
CTTTGATCTGTCTTGTGGAA+AGG 0.572886 6_1:-1141652 None:intergenic
CAATTGATGTCGAAAACTGT+AGG 0.580782 6_1:-1139886 None:intergenic
ATTGACTCTCCTGTAAAAGT+CGG 0.580898 6_1:-1141509 None:intergenic
ATTTGGATCCTCTACGACTG+TGG 0.580941 6_1:-1137179 None:intergenic
ACATGTTGCTCAAACGTCCA+TGG 0.584025 6_1:-1142050 None:intergenic
GCGGTGCAAACGTCGAGCGA+TGG 0.586207 6_1:+1137443 Msa0867890:CDS
ACTTCCAGCAATGGAGAATG+TGG 0.590983 6_1:+1141592 Msa0867890:CDS
GCCGTACCGACGGCCGACAA+TGG 0.594074 6_1:+1137421 Msa0867890:CDS
TACTCACAAAATGAGACTGA+AGG 0.605524 6_1:+1141925 Msa0867890:CDS
CTCTTATGACTCGTATGATG+TGG 0.606375 6_1:+1140671 Msa0867890:CDS
AGCTTGTTTGGATTGGTGGG+AGG 0.607427 6_1:+1140074 Msa0867890:CDS
GATACACTCAGCAACACTCT+CGG 0.607490 6_1:-1142387 None:intergenic
AGACGCTGAAACTAAATGGA+TGG 0.607729 6_1:+1140436 Msa0867890:CDS
AGCAAAAGTAGACAAGATTG+AGG 0.607925 6_1:+1142451 Msa0867890:CDS
TTAGCTGCAAATATGACAGA+GGG 0.613711 6_1:+1140564 Msa0867890:CDS
TTTCTGGGTAAATTATGCAG+AGG 0.614277 6_1:-1137293 None:intergenic
ACATCTTAAGCATAGACTGT+AGG 0.615809 6_1:-1139419 None:intergenic
TTGAGGAAAGAATTGCCCAA+TGG 0.623011 6_1:+1137783 Msa0867890:CDS
GCATGGATTGCATTAAACAA+CGG 0.627109 6_1:+1138168 Msa0867890:CDS
CCAGAGAGTATTGTAAGCGA+AGG 0.628849 6_1:+1141484 Msa0867890:CDS
TTATGCAGAGGAAAGTGAAG+AGG 0.629597 6_1:-1137281 None:intergenic
GTACCGACGGCCGACAATGG+CGG 0.630524 6_1:+1137424 Msa0867890:CDS
ATCGCATACCACAGTCGTAG+AGG 0.633364 6_1:+1137171 Msa0867890:five_prime_UTR
ACTGCAATGAGAAAATTGAC+TGG 0.635322 6_1:+1139252 Msa0867890:CDS
AAACTCGTAAAGATCTAGCA+AGG 0.635952 6_1:+1142739 Msa0867890:three_prime_UTR
TGGAAGCAGATGGATCTCAT+CGG 0.640711 6_1:-1142417 None:intergenic
CCTGCAGTATTGTGTTCAAG+TGG 0.641105 6_1:+1142346 Msa0867890:intron
AACCACCTAGCTCTGAAGGA+GGG 0.641948 6_1:-1139639 None:intergenic
TTCAAGAATACATGAATCCG+AGG 0.642282 6_1:+1140526 Msa0867890:CDS
AACGAAGGAAGAATGTCCAC+CGG 0.642524 6_1:+1137383 Msa0867890:CDS
CAACCACCTAGCTCTGAAGG+AGG 0.643011 6_1:-1139640 None:intergenic
AAAACGAATACATGTTCTGG+AGG 0.643807 6_1:-1142697 None:intergenic
TGCCCTCCTTCAGAGCTAGG+TGG 0.645107 6_1:+1139637 Msa0867890:CDS
TGTTGTCAGACATTAAGTCA+AGG 0.648902 6_1:+1139439 Msa0867890:CDS
CACAGAACTCTGTGTCAAAG+GGG 0.648989 6_1:+1141421 Msa0867890:CDS
GCTCTCTTAAATATCAACCT+CGG 0.654056 6_1:+1140397 Msa0867890:CDS
GACTGAAAATGCAGAAGACG+CGG 0.655292 6_1:+1141450 Msa0867890:CDS
TCATTCCAGAAATCGAACCA+TGG 0.660202 6_1:+1142033 Msa0867890:intron
AGAATACCTCAAAAGACACA+GGG 0.667044 6_1:+1141738 Msa0867890:CDS
GAGAATTTATATGCTCAAAG+GGG 0.668555 6_1:-1139465 None:intergenic
AAATGTATTCTGTTGCTCAG+TGG 0.670307 6_1:+1141680 Msa0867890:CDS
TTTAGCTGCAAATATGACAG+AGG 0.672392 6_1:+1140563 Msa0867890:CDS
CGTCTCGGACTACTACAGGA+TGG 0.673684 6_1:-1139948 None:intergenic
TGTAGAGACAGGAACATCTG+TGG 0.673825 6_1:-1141362 None:intergenic
GTGAAAGTGAATTATAGTGA+AGG 0.674635 6_1:+1137756 Msa0867890:CDS
ACATCGGCAGAAGAAAGTGA+AGG 0.675093 6_1:+1137506 Msa0867890:CDS
AAATTCAGAAGACCGAACCT+CGG 0.675191 6_1:-1140543 None:intergenic
TTCTTGGACCTGAAGTAAGG+TGG 0.676401 6_1:-1137897 None:intergenic
AAGGCGTGTCCAGTTTGTCG+AGG 0.678559 6_1:+1138816 Msa0867890:CDS
ACAGAACTCTGTGTCAAAGG+GGG 0.691218 6_1:+1141422 Msa0867890:CDS
TCACAAAATGAGACTGAAGG+AGG 0.693419 6_1:+1141928 Msa0867890:CDS
CTGCACCGGAGATGGTCCGG+TGG 0.701773 6_1:-1137399 None:intergenic
TAAGCACAGAACAAGACCAG+AGG 0.721315 6_1:-1140003 None:intergenic
GAGGAAAGAATTGCCCAATG+GGG 0.722744 6_1:+1137785 Msa0867890:CDS
TAGCTGCAAATATGACAGAG+GGG 0.735019 6_1:+1140565 Msa0867890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTTGATATATATTTATA+TGG - chr6_1:1137206-1137225 None:intergenic 10.0%
!!! AAAGGATTTTTTTTTTTTTA+GGG - chr6_1:1137240-1137259 None:intergenic 10.0%
!!! AAAAGGATTTTTTTTTTTTT+AGG - chr6_1:1137241-1137260 None:intergenic 10.0%
!! TTTATTCATTATACTTAATA+AGG + chr6_1:1138580-1138599 Msa0867890:intron 10.0%
!! TATGTTCTTAATAATTATAA+TGG + chr6_1:1140280-1140299 Msa0867890:intron 10.0%
!! ATATATATTTATATGGGATT+TGG - chr6_1:1137199-1137218 None:intergenic 15.0%
!!! TTTTTATCAATTTTTCTGAT+GGG - chr6_1:1137334-1137353 None:intergenic 15.0%
!!! ATTTTTATCAATTTTTCTGA+TGG - chr6_1:1137335-1137354 None:intergenic 15.0%
!!! AAAATTCAATTTTTTTCTCA+TGG + chr6_1:1137350-1137369 Msa0867890:exon 15.0%
!! ATAATGAATAAATATAAGCA+AGG - chr6_1:1138572-1138591 None:intergenic 15.0%
!!! AATTTGTTTCAACAAAAAAT+TGG - chr6_1:1138765-1138784 None:intergenic 15.0%
!!! TTTTTTGTTGAAACAAATTT+AGG + chr6_1:1138766-1138785 Msa0867890:intron 15.0%
!!! ATTGCTAAAGTATATTATTT+TGG + chr6_1:1140326-1140345 Msa0867890:intron 15.0%
!! AGTAAAAAAAATTAAGGTTT+AGG - chr6_1:1140758-1140777 None:intergenic 15.0%
!! CAAGAAAGTAAAAAAAATTA+AGG - chr6_1:1140764-1140783 None:intergenic 15.0%
!!! TCAAATTTTACATTTGTTTT+TGG + chr6_1:1141040-1141059 Msa0867890:intron 15.0%
!! TTATATTATAGGAATATGAT+AGG - chr6_1:1141996-1142015 None:intergenic 15.0%
!! AGTCAATCTATTTATATTAT+AGG - chr6_1:1142007-1142026 None:intergenic 15.0%
!!! AATTAGGGTTTTTTTTTTCT+GGG - chr6_1:1137311-1137330 None:intergenic 20.0%
!!! GTGTAGATTATAGTATATTT+TGG + chr6_1:1138339-1138358 Msa0867890:intron 20.0%
!! TTCAATGTTAACATATGTAT+CGG - chr6_1:1138487-1138506 None:intergenic 20.0%
!!! GATAGTTTTTTTTTCTTTAG+CGG + chr6_1:1138927-1138946 Msa0867890:intron 20.0%
!!! AATTTATCTTGTTTTGTAAC+AGG + chr6_1:1138966-1138985 Msa0867890:intron 20.0%
!!! GATATTGCATTTTCATTATT+TGG + chr6_1:1139020-1139039 Msa0867890:CDS 20.0%
!!! TATATGATTTTATGTTTGAC+AGG + chr6_1:1139188-1139207 Msa0867890:intron 20.0%
!!! ATATGATTTTATGTTTGACA+GGG + chr6_1:1139189-1139208 Msa0867890:intron 20.0%
!! AAATACTAATTATGTTAGCA+AGG - chr6_1:1139328-1139347 None:intergenic 20.0%
!! ATTATCAATAGCAATAACTA+TGG - chr6_1:1140211-1140230 None:intergenic 20.0%
!!! TAGTTATTGCTATTGATAAT+TGG + chr6_1:1140211-1140230 Msa0867890:intron 20.0%
!! ATAATAGAATTGAACAAACA+AGG - chr6_1:1140259-1140278 None:intergenic 20.0%
!!! ATACTTTAGCAATGTTTTTT+TGG - chr6_1:1140319-1140338 None:intergenic 20.0%
!! CATAAGAAATGTATACATAT+GGG - chr6_1:1140614-1140633 None:intergenic 20.0%
!! AATGCATAAAATATGATCAT+GGG - chr6_1:1140827-1140846 None:intergenic 20.0%
!! AAATGCATAAAATATGATCA+TGG - chr6_1:1140828-1140847 None:intergenic 20.0%
!! TTTCCTTATTATAACTTATG+AGG + chr6_1:1140994-1141013 Msa0867890:intron 20.0%
!! TATAAACCATAATATTAACC+TGG - chr6_1:1141342-1141361 None:intergenic 20.0%
!!! TTTTTTTAGGGCTAAAAGAT+GGG - chr6_1:1137228-1137247 None:intergenic 25.0%
!!! TTTTTTTTAGGGCTAAAAGA+TGG - chr6_1:1137229-1137248 None:intergenic 25.0%
!! TCTGAGATATAGAAAAGAAA+AGG - chr6_1:1137258-1137277 None:intergenic 25.0%
!!! GAATTAGGGTTTTTTTTTTC+TGG - chr6_1:1137312-1137331 None:intergenic 25.0%
!! AATTTTTCTGATGGGAATTA+GGG - chr6_1:1137326-1137345 None:intergenic 25.0%
! CCACTTGAAAATTATCATAA+GGG - chr6_1:1137938-1137957 None:intergenic 25.0%
!!! CCTTATGATAATTTTCAAGT+GGG + chr6_1:1137936-1137955 Msa0867890:intron 25.0%
! TGAGTATGAATTAGATATTC+TGG + chr6_1:1138229-1138248 Msa0867890:intron 25.0%
!! ATAACTTCTATACCAGTTTT+GGG + chr6_1:1138651-1138670 Msa0867890:intron 25.0%
!!! TTATTTGTTTTATTACCGGA+AGG - chr6_1:1139056-1139075 None:intergenic 25.0%
!!! TCGCTTATTTGTTTTATTAC+CGG - chr6_1:1139060-1139079 None:intergenic 25.0%
!! TATGATTTTATGTTTGACAG+GGG + chr6_1:1139190-1139209 Msa0867890:intron 25.0%
!! GAGTTTTTATCCAAAATTTC+AGG - chr6_1:1139763-1139782 None:intergenic 25.0%
!!! AACTTAGTTTTTTCGTACTT+CGG - chr6_1:1139978-1139997 None:intergenic 25.0%
! AAGTACGAAAAAACTAAGTT+GGG + chr6_1:1139978-1139997 Msa0867890:CDS 25.0%
!! TATTGATAATTGGAATGCAT+TGG + chr6_1:1140221-1140240 Msa0867890:intron 25.0%
! AAACTGTTCTTTGAATAGTT+GGG - chr6_1:1140469-1140488 None:intergenic 25.0%
! CCATAAGAAATGTATACATA+TGG - chr6_1:1140615-1140634 None:intergenic 25.0%
! CCATATGTATACATTTCTTA+TGG + chr6_1:1140612-1140631 Msa0867890:CDS 25.0%
! AAAATATGATCATGGGAATT+CGG - chr6_1:1140820-1140839 None:intergenic 25.0%
! AAAAATATGTACAAGGAACA+GGG - chr6_1:1140944-1140963 None:intergenic 25.0%
! AACAATAATATAAGATGCAG+CGG - chr6_1:1141021-1141040 None:intergenic 25.0%
! ATGATTCAACCATTGAATAA+TGG - chr6_1:1141214-1141233 None:intergenic 25.0%
! TCAAGAACAGTTGAAATATT+TGG - chr6_1:1142197-1142216 None:intergenic 25.0%
! AAAAAAACGAATACATGTTC+TGG - chr6_1:1142703-1142722 None:intergenic 25.0%
! TTTACTGTAGATACTTCAAT+TGG + chr6_1:1142779-1142798 Msa0867890:three_prime_UTR 25.0%
! ATTTATTTCAGATTCAGGTA+AGG - chr6_1:1142853-1142872 None:intergenic 25.0%
! CAATTTTTCTGATGGGAATT+AGG - chr6_1:1137327-1137346 None:intergenic 30.0%
ATCATCTTCAACTTCAACAT+CGG + chr6_1:1137490-1137509 Msa0867890:CDS 30.0%
GCAATTGGATTTGATAAGAA+TGG + chr6_1:1137656-1137675 Msa0867890:CDS 30.0%
TTCTGCACATTCTTCTTATT+CGG - chr6_1:1137714-1137733 None:intergenic 30.0%
! TGTTGATGAAGAATTGGAAT+TGG + chr6_1:1137734-1137753 Msa0867890:CDS 30.0%
GTGAAAGTGAATTATAGTGA+AGG + chr6_1:1137756-1137775 Msa0867890:CDS 30.0%
ATTATAGTGAAGGTGAATTG+AGG + chr6_1:1137766-1137785 Msa0867890:CDS 30.0%
!!! GTTGTTGATTTTCACTGTAA+TGG + chr6_1:1137858-1137877 Msa0867890:CDS 30.0%
!! CCCTTATGATAATTTTCAAG+TGG + chr6_1:1137935-1137954 Msa0867890:intron 30.0%
CCCACTTGAAAATTATCATA+AGG - chr6_1:1137939-1137958 None:intergenic 30.0%
TGTTGTTGTGTACTAATGTT+TGG + chr6_1:1138012-1138031 Msa0867890:intron 30.0%
!!! TTTGGTTGTTTTGTTGTTGT+TGG + chr6_1:1138030-1138049 Msa0867890:intron 30.0%
!!! TTGGTTGTTTTGTTGTTGTT+GGG + chr6_1:1138031-1138050 Msa0867890:intron 30.0%
!!! TTGGGTTTCTGTGTTTTTTA+AGG + chr6_1:1138049-1138068 Msa0867890:intron 30.0%
!!! TTAAGGTTTTGAAGAAGTGT+AGG + chr6_1:1138066-1138085 Msa0867890:intron 30.0%
TATTGTCTGTTGTGCATATA+TGG + chr6_1:1138256-1138275 Msa0867890:intron 30.0%
!!! TGTGTTTTGATTTGTAAGCA+CGG + chr6_1:1138391-1138410 Msa0867890:intron 30.0%
TATAGAAGTTATCATGGAGT+TGG - chr6_1:1138643-1138662 None:intergenic 30.0%
AACTGGTATAGAAGTTATCA+TGG - chr6_1:1138649-1138668 None:intergenic 30.0%
! GATAACTTCTATACCAGTTT+TGG + chr6_1:1138650-1138669 Msa0867890:intron 30.0%
! TGTTTTGTAACAGGATTGTT+TGG + chr6_1:1138975-1138994 Msa0867890:intron 30.0%
GAAACAGAAGCGAAAAATAA+AGG + chr6_1:1139099-1139118 Msa0867890:CDS 30.0%
GAGAATTTATATGCTCAAAG+GGG - chr6_1:1139468-1139487 None:intergenic 30.0%
GGAGAATTTATATGCTCAAA+GGG - chr6_1:1139469-1139488 None:intergenic 30.0%
TGGAGAATTTATATGCTCAA+AGG - chr6_1:1139470-1139489 None:intergenic 30.0%
AAATGCTCTTGTCTTCTAAA+AGG - chr6_1:1139543-1139562 None:intergenic 30.0%
GAAAAACACATCTCAAATCA+AGG - chr6_1:1139678-1139697 None:intergenic 30.0%
! CTATGAAGTTCCTGAAATTT+TGG + chr6_1:1139750-1139769 Msa0867890:CDS 30.0%
TTGAACACTTTCAAAAACAC+TGG + chr6_1:1139917-1139936 Msa0867890:CDS 30.0%
TGAACACTTTCAAAAACACT+GGG + chr6_1:1139918-1139937 Msa0867890:CDS 30.0%
GAAGTACGAAAAAACTAAGT+TGG + chr6_1:1139977-1139996 Msa0867890:CDS 30.0%
!!! AGCAATGTTTTTTTGGTTCA+TGG - chr6_1:1140312-1140331 None:intergenic 30.0%
!!! TTATTTTGGAACTCTTACTC+TGG + chr6_1:1140340-1140359 Msa0867890:intron 30.0%
! AACATTAGACAGCATTTTAC+TGG + chr6_1:1140375-1140394 Msa0867890:CDS 30.0%
GAAACTGTTCTTTGAATAGT+TGG - chr6_1:1140470-1140489 None:intergenic 30.0%
TTTCTTGAATATATCTGCTC+TGG + chr6_1:1140721-1140740 Msa0867890:intron 30.0%
GCATTTATCTTGTGATAACT+CGG + chr6_1:1140842-1140861 Msa0867890:intron 30.0%
CAAAAATATGTACAAGGAAC+AGG - chr6_1:1140945-1140964 None:intergenic 30.0%
! CTGTTCCTTGTACATATTTT+TGG + chr6_1:1140943-1140962 Msa0867890:intron 30.0%
ACAATAATATAAGATGCAGC+GGG - chr6_1:1141020-1141039 None:intergenic 30.0%
!!! TTTTGGTCTTATTAGTCATG+TGG + chr6_1:1141057-1141076 Msa0867890:intron 30.0%
! TTTGTCTCTTTTTGTCAAAC+TGG + chr6_1:1141182-1141201 Msa0867890:intron 30.0%
AATTATCTGACGAAGTACAA+TGG - chr6_1:1141275-1141294 None:intergenic 30.0%
! TATGTATGATTTGTGATTCC+AGG + chr6_1:1141321-1141340 Msa0867890:intron 30.0%
GTGATTCCAGGTTAATATTA+TGG + chr6_1:1141333-1141352 Msa0867890:intron 30.0%
! TTGAGGTATTCTAAAAGCTT+CGG - chr6_1:1141730-1141749 None:intergenic 30.0%
ACTCAAACAAGATCATGTTA+AGG - chr6_1:1141832-1141851 None:intergenic 30.0%
TTAGAATTCCTAATCTGGTA+TGG - chr6_1:1142107-1142126 None:intergenic 30.0%
ATACCAGATTAGGAATTCTA+AGG + chr6_1:1142106-1142125 Msa0867890:CDS 30.0%
ACTTCGAAATTATACACTTC+TGG + chr6_1:1142223-1142242 Msa0867890:intron 30.0%
TCATAGAAGAAAGCAAGAAT+TGG - chr6_1:1142518-1142537 None:intergenic 30.0%
ATGAAAACAGGTGAAGAAAA+TGG + chr6_1:1142581-1142600 Msa0867890:intron 30.0%
!! AGTTCAATCATGTTTTGGAT+TGG - chr6_1:1142655-1142674 None:intergenic 30.0%
! TAGCAAGTTCAATCATGTTT+TGG - chr6_1:1142660-1142679 None:intergenic 30.0%
TTTCTGGGTAAATTATGCAG+AGG - chr6_1:1137296-1137315 None:intergenic 35.0%
CATGGTGAAAAAATCAACGA+AGG + chr6_1:1137368-1137387 Msa0867890:exon 35.0%
! GCAGAATGTTGATGAAGAAT+TGG + chr6_1:1137728-1137747 Msa0867890:CDS 35.0%
! GTCCAAGAATGTTGATAGAA+GGG + chr6_1:1137911-1137930 Msa0867890:CDS 35.0%
! GCATGGATTGCATTAAACAA+CGG + chr6_1:1138168-1138187 Msa0867890:CDS 35.0%
!! CATATGTATCGGTGTTTTGT+TGG - chr6_1:1138476-1138495 None:intergenic 35.0%
TCACTGTCTCCGATTATTAT+CGG + chr6_1:1138512-1138531 Msa0867890:intron 35.0%
AGTTGGATGTACAAAACACA+GGG - chr6_1:1138626-1138645 None:intergenic 35.0%
TGGTCAAATATCAAACAGTG+CGG - chr6_1:1138687-1138706 None:intergenic 35.0%
ACAGGTGACAGAAATCATAT+TGG - chr6_1:1138707-1138726 None:intergenic 35.0%
GATTATGAGCATACAAGTAC+AGG - chr6_1:1138725-1138744 None:intergenic 35.0%
GTATTTCGACACTCAAAATG+AGG + chr6_1:1138788-1138807 Msa0867890:CDS 35.0%
CACTCAAAATGAGGTTAAGA+AGG + chr6_1:1138797-1138816 Msa0867890:CDS 35.0%
GATATCAGACCTTACTTTCA+CGG - chr6_1:1138884-1138903 None:intergenic 35.0%
ACTGCAATGAGAAAATTGAC+TGG + chr6_1:1139252-1139271 Msa0867890:CDS 35.0%
CTTCTGTGAAGATTCAGAAT+AGG - chr6_1:1139385-1139404 None:intergenic 35.0%
ATAGACTGTAGGAACAGTTA+AGG - chr6_1:1139411-1139430 None:intergenic 35.0%
ACATCTTAAGCATAGACTGT+AGG - chr6_1:1139422-1139441 None:intergenic 35.0%
TGTTGTCAGACATTAAGTCA+AGG + chr6_1:1139439-1139458 Msa0867890:CDS 35.0%
ATTTCTTCGATCCAGCTTAT+CGG - chr6_1:1139700-1139719 None:intergenic 35.0%
CAATTGATGTCGAAAACTGT+AGG - chr6_1:1139889-1139908 None:intergenic 35.0%
GAACACTTTCAAAAACACTG+GGG + chr6_1:1139919-1139938 Msa0867890:CDS 35.0%
AACACTTTCAAAAACACTGG+GGG + chr6_1:1139920-1139939 Msa0867890:CDS 35.0%
TGTTCTGTGCTTATCTTGAA+AGG + chr6_1:1140013-1140032 Msa0867890:CDS 35.0%
! AGACTTACTTGAAGCTTGTT+TGG + chr6_1:1140062-1140081 Msa0867890:CDS 35.0%
! TACTTGAAGCTTGTTTGGAT+TGG + chr6_1:1140067-1140086 Msa0867890:CDS 35.0%
GCTCTCTTAAATATCAACCT+CGG + chr6_1:1140397-1140416 Msa0867890:CDS 35.0%
ATCAACCTCGGAAAAATGAT+TGG + chr6_1:1140409-1140428 Msa0867890:CDS 35.0%
ATTACTTCAGCAAAATGAGC+TGG - chr6_1:1140492-1140511 None:intergenic 35.0%
! GCTCATTTTGCTGAAGTAAT+TGG + chr6_1:1140492-1140511 Msa0867890:CDS 35.0%
GGATTCATGTATTCTTGAAG+TGG - chr6_1:1140525-1140544 None:intergenic 35.0%
TTCAAGAATACATGAATCCG+AGG + chr6_1:1140526-1140545 Msa0867890:CDS 35.0%
TTTAGCTGCAAATATGACAG+AGG + chr6_1:1140563-1140582 Msa0867890:CDS 35.0%
TTAGCTGCAAATATGACAGA+GGG + chr6_1:1140564-1140583 Msa0867890:CDS 35.0%
AGAGCAGCAATACATGATAA+AGG + chr6_1:1140588-1140607 Msa0867890:CDS 35.0%
! TAACTCGGTATCTCATCTTT+TGG + chr6_1:1140857-1140876 Msa0867890:intron 35.0%
!! TGGAATAAAAAGCATCCTCT+TGG + chr6_1:1140877-1140896 Msa0867890:intron 35.0%
TCTTGGAATGCTTCTTACTT+GGG + chr6_1:1140894-1140913 Msa0867890:intron 35.0%
! GGGTTTTCATCATATACAAG+TGG - chr6_1:1140924-1140943 None:intergenic 35.0%
GGGCCTCATAAGTTATAATA+AGG - chr6_1:1141000-1141019 None:intergenic 35.0%
! ATTGACTCTCCTGTAAAAGT+CGG - chr6_1:1141512-1141531 None:intergenic 35.0%
AAATGTATTCTGTTGCTCAG+TGG + chr6_1:1141680-1141699 Msa0867890:CDS 35.0%
AATGTATTCTGTTGCTCAGT+GGG + chr6_1:1141681-1141700 Msa0867890:CDS 35.0%
TAGAATACCTCAAAAGACAC+AGG + chr6_1:1141737-1141756 Msa0867890:CDS 35.0%
AGAATACCTCAAAAGACACA+GGG + chr6_1:1141738-1141757 Msa0867890:CDS 35.0%
! AGATGCTCTGATCTAGAATT+GGG - chr6_1:1141895-1141914 None:intergenic 35.0%
! AAGATGCTCTGATCTAGAAT+TGG - chr6_1:1141896-1141915 None:intergenic 35.0%
TACTCACAAAATGAGACTGA+AGG + chr6_1:1141925-1141944 Msa0867890:CDS 35.0%
! TACAAATGCATGGGTTATTG+TGG - chr6_1:1141970-1141989 None:intergenic 35.0%
GATAGGTGATACAAATGCAT+GGG - chr6_1:1141979-1141998 None:intergenic 35.0%
TGATAGGTGATACAAATGCA+TGG - chr6_1:1141980-1141999 None:intergenic 35.0%
AGACCTTAGAATTCCTAATC+TGG - chr6_1:1142112-1142131 None:intergenic 35.0%
GTATTGTGTTCAAGTGGTAT+TGG + chr6_1:1142352-1142371 Msa0867890:intron 35.0%
!! TCTTGTCTACTTTTGCTTTG+TGG - chr6_1:1142448-1142467 None:intergenic 35.0%
AGCAAAAGTAGACAAGATTG+AGG + chr6_1:1142451-1142470 Msa0867890:CDS 35.0%
AGAAGAAAGCAAGAATTGGA+AGG - chr6_1:1142514-1142533 None:intergenic 35.0%
AAAACGAATACATGTTCTGG+AGG - chr6_1:1142700-1142719 None:intergenic 35.0%
AAACTCGTAAAGATCTAGCA+AGG + chr6_1:1142739-1142758 Msa0867890:three_prime_UTR 35.0%
TTATGCAGAGGAAAGTGAAG+AGG - chr6_1:1137284-1137303 None:intergenic 40.0%
ACGTCGTTGAGGTTGAAATT+AGG + chr6_1:1137586-1137605 Msa0867890:CDS 40.0%
!! AAGAATGGTGTTACAGAGAG+AGG + chr6_1:1137671-1137690 Msa0867890:CDS 40.0%
TTGAGGAAAGAATTGCCCAA+TGG + chr6_1:1137783-1137802 Msa0867890:CDS 40.0%
TGAGGAAAGAATTGCCCAAT+GGG + chr6_1:1137784-1137803 Msa0867890:CDS 40.0%
GCAATTTCCATAACCCCATT+GGG - chr6_1:1137801-1137820 None:intergenic 40.0%
AGCAATTTCCATAACCCCAT+TGG - chr6_1:1137802-1137821 None:intergenic 40.0%
TTGTTACACCACCTTACTTC+AGG + chr6_1:1137889-1137908 Msa0867890:CDS 40.0%
ACATTCTTGGACCTGAAGTA+AGG - chr6_1:1137903-1137922 None:intergenic 40.0%
! GGTCCAAGAATGTTGATAGA+AGG + chr6_1:1137910-1137929 Msa0867890:CDS 40.0%
GACCCTTCTATCAACATTCT+TGG - chr6_1:1137916-1137935 None:intergenic 40.0%
!!! AGGTTTTGAAGAAGTGTAGG+AGG + chr6_1:1138069-1138088 Msa0867890:intron 40.0%
CCATGCAGAAAAACTCTTTC+TGG - chr6_1:1138154-1138173 None:intergenic 40.0%
! CCAGAAAGAGTTTTTCTGCA+TGG + chr6_1:1138151-1138170 Msa0867890:CDS 40.0%
GGATTGCATTAAACAACGGT+TGG + chr6_1:1138172-1138191 Msa0867890:intron 40.0%
ACGTCGACACCGATAATAAT+CGG - chr6_1:1138524-1138543 None:intergenic 40.0%
TATAAGCAAGGACACAGACA+CGG - chr6_1:1138560-1138579 None:intergenic 40.0%
TACAAAACACAGGGGTGAAA+TGG - chr6_1:1138617-1138636 None:intergenic 40.0%
GTTGGATGTACAAAACACAG+GGG - chr6_1:1138625-1138644 None:intergenic 40.0%
GAGTTGGATGTACAAAACAC+AGG - chr6_1:1138627-1138646 None:intergenic 40.0%
GGTACTAGTATTCCCAAAAC+TGG - chr6_1:1138666-1138685 None:intergenic 40.0%
GTGTAAAGACCGTGAAAGTA+AGG + chr6_1:1138872-1138891 Msa0867890:CDS 40.0%
TTGTAACAGGATTGTTTGGC+TGG + chr6_1:1138979-1138998 Msa0867890:intron 40.0%
TTGTCAGGTAACTCAGTCAA+TGG - chr6_1:1139490-1139509 None:intergenic 40.0%
GACTGAGTTACCTGACAAAA+TGG + chr6_1:1139492-1139511 Msa0867890:CDS 40.0%
! ATGCAAGTGTCCATTTTGTC+AGG - chr6_1:1139505-1139524 None:intergenic 40.0%
AACTGATACGTCAATGTTGC+TGG + chr6_1:1139576-1139595 Msa0867890:CDS 40.0%
!!! CTGGATTCGACTGGTTTTAA+CGG + chr6_1:1139595-1139614 Msa0867890:CDS 40.0%
! GATGTGTTTTTCCGATAAGC+TGG + chr6_1:1139686-1139705 Msa0867890:CDS 40.0%
GATAAGCTGGATCGAAGAAA+TGG + chr6_1:1139699-1139718 Msa0867890:CDS 40.0%
GATCGAAGAAATGGAAGCTA+AGG + chr6_1:1139708-1139727 Msa0867890:CDS 40.0%
TTTCAAAAACACTGGGGGAA+AGG + chr6_1:1139925-1139944 Msa0867890:CDS 40.0%
! AAAACTAAGTTGGGATCCTC+TGG + chr6_1:1139987-1140006 Msa0867890:CDS 40.0%
! TTGAAGCTTGTTTGGATTGG+TGG + chr6_1:1140070-1140089 Msa0867890:CDS 40.0%
!! TGAAGCTTGTTTGGATTGGT+GGG + chr6_1:1140071-1140090 Msa0867890:CDS 40.0%
!! TCATGCCAATCATTTTTCCG+AGG - chr6_1:1140417-1140436 None:intergenic 40.0%
CATGAGACGCTGAAACTAAA+TGG + chr6_1:1140432-1140451 Msa0867890:CDS 40.0%
AGACGCTGAAACTAAATGGA+TGG + chr6_1:1140436-1140455 Msa0867890:CDS 40.0%
GAATACATGAATCCGAGGTT+CGG + chr6_1:1140531-1140550 Msa0867890:CDS 40.0%
AAATTCAGAAGACCGAACCT+CGG - chr6_1:1140546-1140565 None:intergenic 40.0%
TAGCTGCAAATATGACAGAG+GGG + chr6_1:1140565-1140584 Msa0867890:CDS 40.0%
CTCTTATGACTCGTATGATG+TGG + chr6_1:1140671-1140690 Msa0867890:CDS 40.0%
CATGGGAATTCGGTTGTATT+TGG - chr6_1:1140810-1140829 None:intergenic 40.0%
!! CAAGTAAGAAGCATTCCAAG+AGG - chr6_1:1140895-1140914 None:intergenic 40.0%
CTCTTGGAATGCTTCTTACT+TGG + chr6_1:1140893-1140912 Msa0867890:intron 40.0%
GCTCGCCAAAAATATGTACA+AGG - chr6_1:1140951-1140970 None:intergenic 40.0%
TGGCGTGTACCATTATTCAA+TGG + chr6_1:1141202-1141221 Msa0867890:intron 40.0%
!! ATGGAGTACTGCTATTTGAC+AGG - chr6_1:1141248-1141267 None:intergenic 40.0%
TATCTGACGAAGTACAATGG+AGG - chr6_1:1141272-1141291 None:intergenic 40.0%
GTAAGATGTTCTGTAGAGAC+AGG - chr6_1:1141376-1141395 None:intergenic 40.0%
GAGAACAATACTTCCAGCAA+TGG + chr6_1:1141583-1141602 Msa0867890:CDS 40.0%
CTTTGATCTGTCTTGTGGAA+AGG - chr6_1:1141655-1141674 None:intergenic 40.0%
! ATTCATCCCTGTGTCTTTTG+AGG - chr6_1:1141747-1141766 None:intergenic 40.0%
CTTATTGCTGTCATACTCGT+TGG - chr6_1:1141779-1141798 None:intergenic 40.0%
CAACGAGTATGACAGCAATA+AGG + chr6_1:1141777-1141796 Msa0867890:CDS 40.0%
! TCTAGATCAGAGCATCTTTC+TGG + chr6_1:1141898-1141917 Msa0867890:CDS 40.0%
TCACAAAATGAGACTGAAGG+AGG + chr6_1:1141928-1141947 Msa0867890:CDS 40.0%
TCATTCCAGAAATCGAACCA+TGG + chr6_1:1142033-1142052 Msa0867890:intron 40.0%
! ACTTTTGCTTTGTGGTTCTC+TGG - chr6_1:1142440-1142459 None:intergenic 40.0%
TCTTTCGTGCACATGAAAAC+AGG + chr6_1:1142569-1142588 Msa0867890:intron 40.0%
GAAAATGGCTCTTCATAGCA+TGG + chr6_1:1142596-1142615 Msa0867890:CDS 40.0%
ATTTGGATCCTCTACGACTG+TGG - chr6_1:1137182-1137201 None:intergenic 45.0%
AACGAAGGAAGAATGTCCAC+CGG + chr6_1:1137383-1137402 Msa0867890:CDS 45.0%
ACATCGGCAGAAGAAAGTGA+AGG + chr6_1:1137506-1137525 Msa0867890:CDS 45.0%
CGATGCTGTTGATGTGCAAT+TGG + chr6_1:1137641-1137660 Msa0867890:CDS 45.0%
GAGGAAAGAATTGCCCAATG+GGG + chr6_1:1137785-1137804 Msa0867890:CDS 45.0%
AGAATTGCCCAATGGGGTTA+TGG + chr6_1:1137791-1137810 Msa0867890:CDS 45.0%
TTCTTGGACCTGAAGTAAGG+TGG - chr6_1:1137900-1137919 None:intergenic 45.0%
!! GTAGGAGGAAGAAGTGTCAT+TGG + chr6_1:1138084-1138103 Msa0867890:CDS 45.0%
TTGTAAGCACGGACACTTCT+CGG + chr6_1:1138402-1138421 Msa0867890:intron 45.0%
!! TATCGGTGTTTTGTTGGTGC+TGG - chr6_1:1138470-1138489 None:intergenic 45.0%
GAACAAGTTCCTCGACAAAC+TGG - chr6_1:1138828-1138847 None:intergenic 45.0%
!! GGTCTTTACACTGACTTGCT+CGG - chr6_1:1138863-1138882 None:intergenic 45.0%
! CTGGTACAAGCAGAGTTGAT+AGG + chr6_1:1138998-1139017 Msa0867890:CDS 45.0%
TTTGGTCTGTATGCTCCTTC+CGG + chr6_1:1139038-1139057 Msa0867890:CDS 45.0%
TCAATGTTGCTGGATTCGAC+TGG + chr6_1:1139586-1139605 Msa0867890:CDS 45.0%
TAAGCACAGAACAAGACCAG+AGG - chr6_1:1140006-1140025 None:intergenic 45.0%
! TTTGGAACTCTTACTCTGGC+AGG + chr6_1:1140344-1140363 Msa0867890:intron 45.0%
TGTAGAGACAGGAACATCTG+TGG - chr6_1:1141365-1141384 None:intergenic 45.0%
AGCACAGAACTCTGTGTCAA+AGG + chr6_1:1141419-1141438 Msa0867890:CDS 45.0%
GCACAGAACTCTGTGTCAAA+GGG + chr6_1:1141420-1141439 Msa0867890:CDS 45.0%
CACAGAACTCTGTGTCAAAG+GGG + chr6_1:1141421-1141440 Msa0867890:CDS 45.0%
ACAGAACTCTGTGTCAAAGG+GGG + chr6_1:1141422-1141441 Msa0867890:CDS 45.0%
! GCGTCTTCTGCATTTTCAGT+CGG - chr6_1:1141451-1141470 None:intergenic 45.0%
GACTGAAAATGCAGAAGACG+CGG + chr6_1:1141450-1141469 Msa0867890:CDS 45.0%
CCTTCGCTTACAATACTCTC+TGG - chr6_1:1141487-1141506 None:intergenic 45.0%
!! CCAGAGAGTATTGTAAGCGA+AGG + chr6_1:1141484-1141503 Msa0867890:CDS 45.0%
ACTTCCAGCAATGGAGAATG+TGG + chr6_1:1141592-1141611 Msa0867890:CDS 45.0%
AGAACCACATTCTCCATTGC+TGG - chr6_1:1141599-1141618 None:intergenic 45.0%
AGCAATGGAGAATGTGGTTC+TGG + chr6_1:1141598-1141617 Msa0867890:CDS 45.0%
CAGTGCTTTGATCTGTCTTG+TGG - chr6_1:1141660-1141679 None:intergenic 45.0%
ATGAGACTGAAGGAGGAGTT+TGG + chr6_1:1141935-1141954 Msa0867890:CDS 45.0%
AACGTCCATGGTTCGATTTC+TGG - chr6_1:1142041-1142060 None:intergenic 45.0%
ACATGTTGCTCAAACGTCCA+TGG - chr6_1:1142053-1142072 None:intergenic 45.0%
TGGACGTTTGAGCAACATGT+TGG + chr6_1:1142053-1142072 Msa0867890:CDS 45.0%
GAAGCTATCATCATTCCTGC+TGG + chr6_1:1142077-1142096 Msa0867890:CDS 45.0%
CTGGATGTCCATACCAGATT+AGG + chr6_1:1142096-1142115 Msa0867890:CDS 45.0%
CCACTTGAACACAATACTGC+AGG - chr6_1:1142349-1142368 None:intergenic 45.0%
CCTGCAGTATTGTGTTCAAG+TGG + chr6_1:1142346-1142365 Msa0867890:intron 45.0%
GATACACTCAGCAACACTCT+CGG - chr6_1:1142390-1142409 None:intergenic 45.0%
GATGGATCTCATCGGTCAAT+TGG - chr6_1:1142412-1142431 None:intergenic 45.0%
TGGAAGCAGATGGATCTCAT+CGG - chr6_1:1142420-1142439 None:intergenic 45.0%
GGCTCTTCATAGCATGGATA+TGG + chr6_1:1142602-1142621 Msa0867890:CDS 45.0%
!! TATTTGATATATATTTATAT+GGG - chr6_1:1137205-1137224 None:intergenic 5.0%
!!! TATTATTTTTATTTTTTTTG+CGG + chr6_1:1142816-1142835 Msa0867890:three_prime_UTR 5.0%
ATCGCATACCACAGTCGTAG+AGG + chr6_1:1137171-1137190 Msa0867890:five_prime_UTR 50.0%
!! CTCTGAAGCTTCAACGACTC+TGG - chr6_1:1137534-1137553 None:intergenic 50.0%
GAAGCAAAACGACGTCGTTG+AGG + chr6_1:1137575-1137594 Msa0867890:CDS 50.0%
TCACGACGTGAAGTCGAAAC+AGG - chr6_1:1137825-1137844 None:intergenic 50.0%
!! CTGTTTCTAGCTCTGCATGC+TGG - chr6_1:1139086-1139105 None:intergenic 50.0%
!! AACCACCTAGCTCTGAAGGA+GGG - chr6_1:1139642-1139661 None:intergenic 50.0%
!! AGCTTGTTTGGATTGGTGGG+AGG + chr6_1:1140074-1140093 Msa0867890:CDS 50.0%
GACGAAGTACAATGGAGGCA+TGG - chr6_1:1141267-1141286 None:intergenic 50.0%
TGCAGAAGACGCGGAACAAA+AGG + chr6_1:1141459-1141478 Msa0867890:CDS 50.0%
!! GCGAAGGAACCGACTTTTAC+AGG + chr6_1:1141500-1141519 Msa0867890:CDS 50.0%
TTGCTCAGTGGGATGTCTTC+CGG + chr6_1:1141692-1141711 Msa0867890:CDS 50.0%
ATCTGGTATGGACATCCAGC+AGG - chr6_1:1142095-1142114 None:intergenic 50.0%
! TGTGGTTCTCTGGAAGCAGA+TGG - chr6_1:1142430-1142449 None:intergenic 50.0%
AATGTCCACCGGACCATCTC+CGG + chr6_1:1137394-1137413 Msa0867890:CDS 55.0%
GACGTTTGCACCGCCATTGT+CGG - chr6_1:1137437-1137456 None:intergenic 55.0%
ACACAGACACGGACACGACA+CGG - chr6_1:1138549-1138568 None:intergenic 55.0%
AAGGCGTGTCCAGTTTGTCG+AGG + chr6_1:1138816-1138835 Msa0867890:CDS 55.0%
TCATGCCCTCCTTCAGAGCT+AGG + chr6_1:1139634-1139653 Msa0867890:CDS 55.0%
!! CAACCACCTAGCTCTGAAGG+AGG - chr6_1:1139643-1139662 None:intergenic 55.0%
!! CCACAACCACCTAGCTCTGA+AGG - chr6_1:1139646-1139665 None:intergenic 55.0%
CCTTCAGAGCTAGGTGGTTG+TGG + chr6_1:1139643-1139662 Msa0867890:CDS 55.0%
CGTCTCGGACTACTACAGGA+TGG - chr6_1:1139951-1139970 None:intergenic 55.0%
AGCACGTCTCGGACTACTAC+AGG - chr6_1:1139955-1139974 None:intergenic 55.0%
TCGTACTTCGGAGCACGTCT+CGG - chr6_1:1139966-1139985 None:intergenic 55.0%
GCTTCGGTACATCCTGTCTC+CGG - chr6_1:1141714-1141733 None:intergenic 55.0%
GCACGGACACTTCTCGGAGT+AGG + chr6_1:1138408-1138427 Msa0867890:intron 60.0%
ACCGACGCGTGTCCAACATC+GGG - chr6_1:1138445-1138464 None:intergenic 60.0%
CACCGACGCGTGTCCAACAT+CGG - chr6_1:1138446-1138465 None:intergenic 60.0%
TGCCCTCCTTCAGAGCTAGG+TGG + chr6_1:1139637-1139656 Msa0867890:CDS 60.0%
GTGGGATGTCTTCCGGAGAC+AGG + chr6_1:1141699-1141718 Msa0867890:CDS 60.0%
GCCATTGTCGGCCGTCGGTA+CGG - chr6_1:1137425-1137444 None:intergenic 65.0%
! GTACCGACGGCCGACAATGG+CGG + chr6_1:1137424-1137443 Msa0867890:CDS 65.0%
GCGGTGCAAACGTCGAGCGA+TGG + chr6_1:1137443-1137462 Msa0867890:CDS 65.0%
GCGTGTCGTGTCCCCGATGT+TGG + chr6_1:1138430-1138449 Msa0867890:intron 65.0%
CCGACGCGTGTCCAACATCG+GGG - chr6_1:1138444-1138463 None:intergenic 65.0%
CCCCGATGTTGGACACGCGT+CGG + chr6_1:1138441-1138460 Msa0867890:intron 65.0%
CTGCACCGGAGATGGTCCGG+TGG - chr6_1:1137402-1137421 None:intergenic 70.0%
CGGCTGCACCGGAGATGGTC+CGG - chr6_1:1137405-1137424 None:intergenic 70.0%
CGGTACGGCTGCACCGGAGA+TGG - chr6_1:1137410-1137429 None:intergenic 70.0%
CTCCGGTGCAGCCGTACCGA+CGG + chr6_1:1137411-1137430 Msa0867890:CDS 70.0%
! GCCGTACCGACGGCCGACAA+TGG + chr6_1:1137421-1137440 Msa0867890:CDS 70.0%
GCACCGCCATTGTCGGCCGT+CGG - chr6_1:1137430-1137449 None:intergenic 70.0%
GGCCGTCGGTACGGCTGCAC+CGG - chr6_1:1137416-1137435 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 1137168 1142872 1137168 ID=Msa0867890;Name=Msa0867890
chr6_1 mRNA 1137168 1142872 1137168 ID=Msa0867890-mRNA-1;Parent=Msa0867890;Name=Msa0867890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=201|1|1|1|1|1|12|201|959
chr6_1 exon 1137168 1137953 1137168 ID=Msa0867890-mRNA-1:exon:276;Parent=Msa0867890-mRNA-1
chr6_1 exon 1138071 1138189 1138071 ID=Msa0867890-mRNA-1:exon:277;Parent=Msa0867890-mRNA-1
chr6_1 exon 1138788 1138893 1138788 ID=Msa0867890-mRNA-1:exon:278;Parent=Msa0867890-mRNA-1
chr6_1 exon 1138988 1139120 1138988 ID=Msa0867890-mRNA-1:exon:279;Parent=Msa0867890-mRNA-1
chr6_1 exon 1139210 1139273 1139210 ID=Msa0867890-mRNA-1:exon:280;Parent=Msa0867890-mRNA-1
chr6_1 exon 1139366 1140095 1139366 ID=Msa0867890-mRNA-1:exon:281;Parent=Msa0867890-mRNA-1
chr6_1 exon 1140366 1140692 1140366 ID=Msa0867890-mRNA-1:exon:282;Parent=Msa0867890-mRNA-1
chr6_1 exon 1141343 1141798 1141343 ID=Msa0867890-mRNA-1:exon:283;Parent=Msa0867890-mRNA-1
chr6_1 exon 1141884 1141956 1141884 ID=Msa0867890-mRNA-1:exon:284;Parent=Msa0867890-mRNA-1
chr6_1 exon 1142042 1142127 1142042 ID=Msa0867890-mRNA-1:exon:285;Parent=Msa0867890-mRNA-1
chr6_1 exon 1142353 1142472 1142353 ID=Msa0867890-mRNA-1:exon:286;Parent=Msa0867890-mRNA-1
chr6_1 exon 1142591 1142872 1142591 ID=Msa0867890-mRNA-1:exon:287;Parent=Msa0867890-mRNA-1
chr6_1 five_prime_UTR 1137168 1137368 1137168 ID=Msa0867890-mRNA-1:five_prime_utr;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1137369 1137953 1137369 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1138071 1138189 1138071 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1138788 1138893 1138788 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1138988 1139120 1138988 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1139210 1139273 1139210 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1139366 1140095 1139366 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1140366 1140692 1140366 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1141343 1141798 1141343 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1141884 1141956 1141884 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1142042 1142127 1142042 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1142353 1142472 1142353 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 CDS 1142591 1142671 1142591 ID=Msa0867890-mRNA-1:cds;Parent=Msa0867890-mRNA-1
chr6_1 three_prime_UTR 1142672 1142872 1142672 ID=Msa0867890-mRNA-1:three_prime_utr;Parent=Msa0867890-mRNA-1
Gene Sequence

>Msa0867890

ATGGTGAAAAAATCAACGAAGGAAGAATGTCCACCGGACCATCTCCGGTGCAGCCGTACCGACGGCCGACAATGGCGGTGCAAACGTCGAGCGATGGAAAACGTGAAGTTATGCGAAGTTCATCATCTTCAACTTCAACATCGGCAGAAGAAAGTGAAGGTTCCAGAGTCGTTGAAGCTTCAGAGAAATATGAAGATGAAGAAGAAGAAGCAAAACGACGTCGTTGAGGTTGAAATTAGGTCAAAGAAGAAAAAGAAGAAGAGTAAGAAAAACGATGCTGTTGATGTGCAATTGGATTTGATAAGAATGGTGTTACAGAGAGAGGTTGAGAAGAAGAAGAATCCGAATAAGAAGAATGTGCAGAATGTTGATGAAGAATTGGAATTGGTGAAAGTGAATTATAGTGAAGGTGAATTGAGGAAAGAATTGCCCAATGGGGTTATGGAAATTGCTCCTGTTTCGACTTCACGTCGTGATGATGATGATGATGTTGTTGATTTTCACTGTAATGGTAAAGCTGTTGTTACACCACCTTACTTCAGGTCCAAGAATGTTGATAGAAGGGTCCCTTATGATAATTTTCAAGTTTTGAAGAAGTGTAGGAGGAAGAAGTGTCATTGGTGTCAGAGTAGTGATTCTTTGAATTTGATCAAGTGTAACAACTGCCAGAAAGAGTTTTTCTGCATGGATTGCATTAAACAACGGTATTTCGACACTCAAAATGAGGTTAAGAAGGCGTGTCCAGTTTGTCGAGGAACTTGTTCATGTAAAGATTGCCGAGCAAGTCAGTGTAAAGACCGTGAAAGTAAGGATTGTTTGGCTGGTACAAGCAGAGTTGATAGGATATTGCATTTTCATTATTTGGTCTGTATGCTCCTTCCGGTAATAAAACAAATAAGCGAAGACCAGCATGCAGAGCTAGAAACAGAAGCGAAAAATAAAGGGGAAAGTATTTCTGATATTCTCATCAAGCAAATCGAATTTGACTGCAATGAGAAAATTGACTGCAACTACTGCAAAACACCTATTCTGAATCTTCACAGAAGCTGCCTTAACTGTTCCTACAGTCTATGCTTAAGATGTTGTCAGACATTAAGTCAAGGAAGCCCCTTTGAGCATATAAATTCTCCATTGACTGAGTTACCTGACAAAATGGACACTTGCATTGCTGATGAAAGTTGCCTTTTAGAAGACAAGAGCATTTCTAGCGACAATGAAACTGATACGTCAATGTTGCTGGATTCGACTGGTTTTAACGGTACAACTGACAGTATATCATGCCCTCCTTCAGAGCTAGGTGGTTGTGGTAATGACAACCTTGATTTGAGATGTGTTTTTCCGATAAGCTGGATCGAAGAAATGGAAGCTAAGGCAGAAGAGATAGTTTGCAGCTATGAAGTTCCTGAAATTTTGGATAAAAACTCAAGTTGCTCACTTTGTATTGACAAAGATCATAAAACTAAGAGACATAAGCAATTTGAAGATGCTGCTCGAAGAGAAGATTCTAATGATAATTGCTTATTTTATCCTACAGTTTTCGACATCAATTGCGATCATTTTGAACACTTTCAAAAACACTGGGGGAAAGGCCATCCTGTAGTAGTCCGAGACGTGCTCCGAAGTACGAAAAAACTAAGTTGGGATCCTCTGGTCTTGTTCTGTGCTTATCTTGAAAGGAGCATTGCAAGATATGAGAATAATAAAGACTTACTTGAAGCTTGTTTGGATTGGTGGGAGGTTGAAATTAACATTAGACAGCATTTTACTGGCTCTCTTAAATATCAACCTCGGAAAAATGATTGGCATGAGACGCTGAAACTAAATGGATGGTTATCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTAATTGGTGCTCTTCCACTTCAAGAATACATGAATCCGAGGTTCGGTCTTCTGAATTTAGCTGCAAATATGACAGAGGGGAGAGCAGCAATACATGATAAAGGCCCATATGTATACATTTCTTATGGCTGTGCTGACAACAAAGCTTATTCTGTGCTAAATCTCTCTTATGACTCGTATGATGTGGTTAATATTATGGTTTATACCACAGATGTTCCTGTCTCTACAGAACATCTTACTAAAATAACTAAGTTATTGAAGAAGCACAGAACTCTGTGTCAAAGGGGGTCACCGACTGAAAATGCAGAAGACGCGGAACAAAAGGAACCAGAGAGTATTGTAAGCGAAGGAACCGACTTTTACAGGAGAGTCAATAGAACATCTTACATCTCTACTGAAGTGAAAGCAATAGCTAGTCAAAGTTTAGAGAACAATACTTCCAGCAATGGAGAATGTGGTTCTGGTTCTGATGCTGAAAAAACAGAAAGCTCTTTACCTTTCCACAAGACAGATCAAAGCACTGAAATGTATTCTGTTGCTCAGTGGGATGTCTTCCGGAGACAGGATGTACCGAAGCTTTTAGAATACCTCAAAAGACACAGGGATGAATTTTCTTTTACCAACGAGTATGACAGCAATAAGATAGTTCACCCAATTCTAGATCAGAGCATCTTTCTGGACAATACTCACAAAATGAGACTGAAGGAGGAGTTTGAAATCGAACCATGGACGTTTGAGCAACATGTTGGAGAAGCTATCATCATTCCTGCTGGATGTCCATACCAGATTAGGAATTCTAAGTATTGTGTTCAAGTGGTATTGGAATTTATGTCTTCCGAGAGTGTTGCTGAGTGTATCCAATTGACCGATGAGATCCATCTGCTTCCAGAGAACCACAAAGCAAAAGTAGACAAGATTGAGGTGAAGAAAATGGCTCTTCATAGCATGGATATGGCGATAAAAGAAATACGCGAGCTCACTTCCAATCCAAAACATGATTGA
Protein sequence

>Msa0867890

MVKKSTKEECPPDHLRCSRTDGRQWRCKRRAMENVKLCEVHHLQLQHRQKKVKVPESLKLQRNMKMKKKKQNDVVEVEIRSKKKKKKSKKNDAVDVQLDLIRMVLQREVEKKKNPNKKNVQNVDEELELVKVNYSEGELRKELPNGVMEIAPVSTSRRDDDDDVVDFHCNGKAVVTPPYFRSKNVDRRVPYDNFQVLKKCRRKKCHWCQSSDSLNLIKCNNCQKEFFCMDCIKQRYFDTQNEVKKACPVCRGTCSCKDCRASQCKDRESKDCLAGTSRVDRILHFHYLVCMLLPVIKQISEDQHAELETEAKNKGESISDILIKQIEFDCNEKIDCNYCKTPILNLHRSCLNCSYSLCLRCCQTLSQGSPFEHINSPLTELPDKMDTCIADESCLLEDKSISSDNETDTSMLLDSTGFNGTTDSISCPPSELGGCGNDNLDLRCVFPISWIEEMEAKAEEIVCSYEVPEILDKNSSCSLCIDKDHKTKRHKQFEDAARREDSNDNCLFYPTVFDINCDHFEHFQKHWGKGHPVVVRDVLRSTKKLSWDPLVLFCAYLERSIARYENNKDLLEACLDWWEVEINIRQHFTGSLKYQPRKNDWHETLKLNGWLSSQLFKEQFPAHFAEVIGALPLQEYMNPRFGLLNLAANMTEGRAAIHDKGPYVYISYGCADNKAYSVLNLSYDSYDVVNIMVYTTDVPVSTEHLTKITKLLKKHRTLCQRGSPTENAEDAEQKEPESIVSEGTDFYRRVNRTSYISTEVKAIASQSLENNTSSNGECGSGSDAEKTESSLPFHKTDQSTEMYSVAQWDVFRRQDVPKLLEYLKRHRDEFSFTNEYDSNKIVHPILDQSIFLDNTHKMRLKEEFEIEPWTFEQHVGEAIIIPAGCPYQIRNSKYCVQVVLEFMSSESVAECIQLTDEIHLLPENHKAKVDKIEVKKMALHSMDMAIKEIRELTSNPKHD*