AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0829620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829620 MtrunA17_Chr2g0281051 96.369 964 29 4 1 959 1 963 0.0 1911
Msa0829620 MtrunA17_Chr4g0048531 63.978 558 171 7 423 953 725 1279 0.0 714
Msa0829620 MtrunA17_Chr4g0048531 50.000 508 180 12 1 442 1 500 6.14e-127 415
Msa0829620 MtrunA17_Chr7g0275771 35.951 815 443 20 198 953 133 927 2.98e-156 484
Msa0829620 MtrunA17_Chr1g0192011 30.372 968 564 25 12 957 88 967 2.56e-134 428
Msa0829620 MtrunA17_Chr1g0211711 34.980 749 425 15 205 942 343 1040 9.67e-131 421
Msa0829620 MtrunA17_Chr4g0075261 33.460 792 439 18 180 952 144 866 5.05e-128 408
Msa0829620 MtrunA17_Chr1g0183311 35.045 779 440 17 205 955 144 884 4.65e-121 390
Msa0829620 MtrunA17_Chr2g0289121 32.938 759 403 18 203 949 154 818 2.13e-105 347
Msa0829620 MtrunA17_Chr5g0420361 35.441 680 378 22 287 949 157 792 5.27e-99 329
Msa0829620 MtrunA17_Chr1g0211661 33.475 705 389 16 205 893 225 865 5.96e-97 325
Msa0829620 MtrunA17_Chr6g0472441 32.344 674 369 19 287 939 99 706 8.46e-86 291
Msa0829620 MtrunA17_Chr1g0147021 33.658 514 291 14 198 698 863 1339 3.81e-80 286
Msa0829620 MtrunA17_Chr1g0147021 47.594 187 83 1 766 952 1526 1697 4.30e-49 190
Msa0829620 MtrunA17_Chr1g0211691 32.612 647 361 20 205 830 342 934 1.92e-74 264
Msa0829620 MtrunA17_Chr5g0426961 33.208 530 321 14 205 715 140 655 3.62e-73 258
Msa0829620 MtrunA17_Chr5g0426961 49.664 149 75 0 806 954 688 836 1.61e-41 164
Msa0829620 MtrunA17_Chr2g0289031 32.952 437 227 6 523 954 22 397 7.85e-66 226
Msa0829620 MtrunA17_Chr5g0448301 31.325 581 310 17 294 863 129 631 3.00e-59 214
Msa0829620 MtrunA17_Chr1g0211701 51.429 105 51 0 838 942 3 107 2.39e-33 126
Msa0829620 MtrunA17_Chr2g0289091 50.000 110 55 0 806 915 311 420 2.05e-28 119
Msa0829620 MtrunA17_Chr2g0289091 37.778 135 81 2 579 711 20 153 4.74e-17 84.7
Msa0829620 MtrunA17_Chr2g0289041 34.101 217 123 7 226 435 1 204 2.10e-25 105
Msa0829620 MtrunA17_Chr8g0361391 51.020 98 46 2 796 893 42 137 7.66e-25 102
Msa0829620 MtrunA17_Chr8g0361381 32.701 211 134 4 486 693 7 212 1.02e-22 97.4
Msa0829620 MtrunA17_Chr7g0231061 39.286 112 65 2 605 714 48 158 1.64e-15 76.3
Msa0829620 MtrunA17_Chr8g0364421 27.016 248 140 8 315 556 5 217 6.50e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829620 AT4G21430.1 38.454 996 487 23 6 955 2 917 0.0 619
Msa0829620 AT4G00990.1 36.030 791 438 19 198 952 73 831 2.92e-149 463
Msa0829620 AT1G62310.1 35.316 790 413 17 170 939 172 883 2.03e-137 434
Msa0829620 AT4G00990.2 35.479 730 403 19 198 891 73 770 2.34e-128 407
Msa0829620 AT4G00990.3 35.479 730 403 19 198 891 73 770 2.85e-128 406
Msa0829620 AT1G09060.4 29.877 974 554 28 12 957 39 911 6.47e-117 381
Msa0829620 AT1G09060.3 29.877 974 554 28 12 957 39 911 6.47e-117 381
Msa0829620 AT1G09060.2 29.877 974 554 28 12 957 25 897 6.70e-117 380
Msa0829620 AT1G09060.1 29.877 974 554 28 12 957 25 897 6.70e-117 380
Msa0829620 AT1G11950.2 34.686 542 330 11 205 740 193 716 3.80e-87 297
Msa0829620 AT1G11950.2 57.500 80 34 0 804 883 722 801 3.62e-20 97.1
Msa0829620 AT1G11950.1 34.686 542 330 11 205 740 193 716 4.99e-87 298
Msa0829620 AT1G11950.1 53.691 149 69 0 804 952 722 870 6.75e-45 175
Msa0829620 AT1G11950.3 34.686 542 330 11 205 740 193 716 4.99e-87 298
Msa0829620 AT1G11950.3 53.691 149 69 0 804 952 722 870 6.75e-45 175
Msa0829620 AT3G07610.1 35.171 526 266 10 435 949 429 890 5.54e-87 301
Msa0829620 AT3G07610.1 31.515 165 110 3 205 368 155 317 2.40e-18 91.3
Msa0829620 AT3G07610.3 34.470 528 289 11 435 949 429 912 6.40e-82 287
Msa0829620 AT3G07610.3 31.515 165 110 3 205 368 155 317 2.27e-18 91.3
Msa0829620 AT3G07610.2 33.692 279 163 7 435 699 429 699 9.88e-37 149
Msa0829620 AT3G07610.2 31.515 165 110 3 205 368 155 317 7.99e-18 89.4

Find 174 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGAAGTTCCTGAAATTT+TGG 0.135711 5_4:-2659798 Msa0829620:CDS
TCTAGATCAGAGCATCTTTC+TGG 0.167659 5_4:-2657650 Msa0829620:CDS
GTGATTCCAGGTTAATATTA+TGG 0.205887 5_4:-2658215 Msa0829620:intron
GTATTTGATATATATTTATA+TGG 0.228674 5_4:+2662345 None:intergenic
TATTTATTTATTTCAGATTC+AGG 0.243459 5_4:+2656693 None:intergenic
ATATATATTTATATGGGATT+TGG 0.250174 5_4:+2662352 None:intergenic
TTCTGCACATTCTTCTTATT+CGG 0.285729 5_4:+2661837 None:intergenic
GACCCTTCTATCAACATTCT+TGG 0.288257 5_4:+2661635 None:intergenic
AGACTTACTTGAAGCTTGTT+TGG 0.301685 5_4:-2659486 Msa0829620:CDS
CCATATGTATACATTTCTTA+TGG 0.304239 5_4:-2658936 Msa0829620:CDS
TAGCAAGTTCAATCATGTTT+TGG 0.316293 5_4:+2656891 None:intergenic
GACTGAGTTACCTGACAAAA+TGG 0.323753 5_4:-2660056 Msa0829620:CDS
AAATGCTCTTGTCTTCTAAA+AGG 0.324737 5_4:+2660008 None:intergenic
ATTTCTTCGATCCAGCTTAT+CGG 0.342412 5_4:+2659851 None:intergenic
CATGAGACGCTGAAACTAAA+TGG 0.343510 5_4:-2659116 Msa0829620:CDS
TTGTTACACCACCTTACTTC+AGG 0.344307 5_4:-2661659 Msa0829620:CDS
GAAACTGTTCTTTGAATAGT+TGG 0.351565 5_4:+2659081 None:intergenic
GGCTCTTCATAGCATGGATA+TGG 0.356860 5_4:-2656946 Msa0829620:CDS
TTGCTCAGTGGGATGTCTTC+CGG 0.358224 5_4:-2657856 Msa0829620:CDS
AAGATGCTCTGATCTAGAAT+TGG 0.360917 5_4:+2657655 None:intergenic
ATGAAAACAGGTGAAGAAAA+TGG 0.371127 5_4:-2656967 Msa0829620:intron
TTTGGTCTGTATGCTCCTTC+CGG 0.375126 5_4:-2660510 Msa0829620:CDS
AGAATTGCCCAATGGGGTTA+TGG 0.377287 5_4:-2661757 Msa0829620:CDS
GACGTTTGCACCGCCATTGT+CGG 0.389619 5_4:+2662114 None:intergenic
CTGGATGTCCATACCAGATT+AGG 0.389865 5_4:-2657452 Msa0829620:CDS
GGTCCAAGAATGTTGATAGA+AGG 0.390687 5_4:-2661638 Msa0829620:CDS
GATATCAGACCTTACTTTCA+CGG 0.390688 5_4:+2660667 None:intergenic
AACTGATACGTCAATGTTGC+TGG 0.394642 5_4:-2659972 Msa0829620:CDS
GAACAAGTTCCTCGACAAAC+TGG 0.395372 5_4:+2660723 None:intergenic
ATGAGACTGAAGGAGGAGTT+TGG 0.403179 5_4:-2657613 Msa0829620:intron
CCATAAGAAATGTATACATA+TGG 0.404527 5_4:+2658936 None:intergenic
AGACCTTAGAATTCCTAATC+TGG 0.404706 5_4:+2657439 None:intergenic
CTCTGAAGCTTCAACGACTC+TGG 0.404970 5_4:+2662017 None:intergenic
CGATGCTGTTGATGTGCAAT+TGG 0.407019 5_4:-2661907 Msa0829620:CDS
TACTTGAAGCTTGTTTGGAT+TGG 0.411244 5_4:-2659481 Msa0829620:CDS
ACGTCGTTGAGGTTGAAATT+AGG 0.411680 5_4:-2661962 Msa0829620:CDS
TGCAGAAGACGCGGAACAAA+AGG 0.411789 5_4:-2658089 Msa0829620:CDS
GCAGAATGTTGATGAAGAAT+TGG 0.414276 5_4:-2661820 Msa0829620:CDS
TATTTGATATATATTTATAT+GGG 0.415608 5_4:+2662346 None:intergenic
AGAACCACATTCTCCATTGC+TGG 0.416045 5_4:+2657952 None:intergenic
GATGGATCTCATCGGTCAAT+TGG 0.419978 5_4:+2657139 None:intergenic
GGAGAATTTATATGCTCAAA+GGG 0.425573 5_4:+2660082 None:intergenic
TCACGACGTGAAGTCGAAAC+AGG 0.425913 5_4:+2661726 None:intergenic
TTTACTGTAGATACTTCAAT+TGG 0.428309 5_4:-2656769 Msa0829620:three_prime_UTR
CCTTCAGAGCTAGGTGGTTG+TGG 0.433804 5_4:-2659905 Msa0829620:CDS
CCCACTTGAAAATTATCATA+AGG 0.434928 5_4:+2661612 None:intergenic
GATAAGCTGGATCGAAGAAA+TGG 0.436682 5_4:-2659849 Msa0829620:CDS
TTGAGGTATTCTAAAAGCTT+CGG 0.437209 5_4:+2657821 None:intergenic
CAACGAGTATGACAGCAATA+AGG 0.437898 5_4:-2657771 Msa0829620:intron
TGTTGATGAAGAATTGGAAT+TGG 0.439901 5_4:-2661814 Msa0829620:CDS
TTGAAGCTTGTTTGGATTGG+TGG 0.446072 5_4:-2659478 Msa0829620:CDS
AGCAATGGAGAATGTGGTTC+TGG 0.446783 5_4:-2657950 Msa0829620:CDS
GCACAGAACTCTGTGTCAAA+GGG 0.448957 5_4:-2658128 Msa0829620:CDS
TGTTCTGTGCTTATCTTGAA+AGG 0.451673 5_4:-2659535 Msa0829620:CDS
TGAGGAAAGAATTGCCCAAT+GGG 0.453383 5_4:-2661764 Msa0829620:CDS
AGAGCAGCAATACATGATAA+AGG 0.454792 5_4:-2658960 Msa0829620:CDS
GCCATTGTCGGCCGTCGGTA+CGG 0.461722 5_4:+2662126 None:intergenic
AATGTCCACCGGACCATCTC+CGG 0.464613 5_4:-2662154 Msa0829620:CDS
TTGTAACAGGATTGTTTGGC+TGG 0.465255 5_4:-2660569 Msa0829620:intron
GTATTGTGTTCAAGTGGTAT+TGG 0.466768 5_4:-2657196 Msa0829620:CDS
ATACCAGATTAGGAATTCTA+AGG 0.467888 5_4:-2657442 Msa0829620:intron
TTGTCAGGTAACTCAGTCAA+TGG 0.467994 5_4:+2660061 None:intergenic
CTGTTTCTAGCTCTGCATGC+TGG 0.468543 5_4:+2660465 None:intergenic
GTGTAAAGACCGTGAAAGTA+AGG 0.471686 5_4:-2660676 Msa0829620:intron
GCAATTTCCATAACCCCATT+GGG 0.475334 5_4:+2661750 None:intergenic
AGATGCTCTGATCTAGAATT+GGG 0.475458 5_4:+2657656 None:intergenic
AGCAATTTCCATAACCCCAT+TGG 0.477634 5_4:+2661749 None:intergenic
CCTTCGCTTACAATACTCTC+TGG 0.479033 5_4:+2658064 None:intergenic
CAGTGCTTTGATCTGTCTTG+TGG 0.480515 5_4:+2657891 None:intergenic
CGGCTGCACCGGAGATGGTC+CGG 0.480955 5_4:+2662146 None:intergenic
GTAGGAGGAAGAAGTGTCAT+TGG 0.481387 5_4:-2661464 Msa0829620:CDS
ATAGACTGTAGGAACAGTTA+AGG 0.484995 5_4:+2660140 None:intergenic
TTAGAATTCCTAATCTGGTA+TGG 0.487915 5_4:+2657444 None:intergenic
CCACTTGAAAATTATCATAA+GGG 0.488219 5_4:+2661613 None:intergenic
AAAACTAAGTTGGGATCCTC+TGG 0.488482 5_4:-2659561 Msa0829620:CDS
TCTGAGATATAGAAAAGAAA+AGG 0.490747 5_4:+2662293 None:intergenic
GGCCGTCGGTACGGCTGCAC+CGG 0.494483 5_4:+2662135 None:intergenic
TGTGGTTCTCTGGAAGCAGA+TGG 0.496122 5_4:+2657121 None:intergenic
AAACTGTTCTTTGAATAGTT+GGG 0.497020 5_4:+2659082 None:intergenic
AGCACAGAACTCTGTGTCAA+AGG 0.497022 5_4:-2658129 Msa0829620:CDS
TCATGCCCTCCTTCAGAGCT+AGG 0.498248 5_4:-2659914 Msa0829620:CDS
GTGGGATGTCTTCCGGAGAC+AGG 0.500947 5_4:-2657849 Msa0829620:CDS
CTTATTGCTGTCATACTCGT+TGG 0.501448 5_4:+2657772 None:intergenic
TGAAGCTTGTTTGGATTGGT+GGG 0.502278 5_4:-2659477 Msa0829620:CDS
GAATACATGAATCCGAGGTT+CGG 0.506022 5_4:-2659017 Msa0829620:CDS
AATGTATTCTGTTGCTCAGT+GGG 0.508686 5_4:-2657867 Msa0829620:CDS
GTAAGATGTTCTGTAGAGAC+AGG 0.508727 5_4:+2658175 None:intergenic
TCGTACTTCGGAGCACGTCT+CGG 0.510020 5_4:+2659585 None:intergenic
CACTCAAAATGAGGTTAAGA+AGG 0.510187 5_4:-2660751 Msa0829620:CDS
CATAAGAAATGTATACATAT+GGG 0.512294 5_4:+2658937 None:intergenic
GGTCTTTACACTGACTTGCT+CGG 0.516495 5_4:+2660688 None:intergenic
CTTCTGTGAAGATTCAGAAT+AGG 0.519354 5_4:+2660166 None:intergenic
AAGAATGGTGTTACAGAGAG+AGG 0.520069 5_4:-2661877 Msa0829620:CDS
ACATTCTTGGACCTGAAGTA+AGG 0.520627 5_4:+2661648 None:intergenic
GCAATTGGATTTGATAAGAA+TGG 0.521348 5_4:-2661892 Msa0829620:CDS
GAAGCTATCATCATTCCTGC+TGG 0.521605 5_4:-2657471 Msa0829620:CDS
CTGGTACAAGCAGAGTTGAT+AGG 0.525136 5_4:-2660550 Msa0829620:CDS
GTATTTCGACACTCAAAATG+AGG 0.531795 5_4:-2660760 Msa0829620:CDS
ATCATCTTCAACTTCAACAT+CGG 0.533036 5_4:-2662058 Msa0829620:CDS
CGGTACGGCTGCACCGGAGA+TGG 0.535565 5_4:+2662141 None:intergenic
TGGAGAATTTATATGCTCAA+AGG 0.536643 5_4:+2660081 None:intergenic
ATTACTTCAGCAAAATGAGC+TGG 0.538244 5_4:+2659059 None:intergenic
CCACAACCACCTAGCTCTGA+AGG 0.546033 5_4:+2659905 None:intergenic
ATTTATTTCAGATTCAGGTA+AGG 0.547813 5_4:+2656698 None:intergenic
AGCACGTCTCGGACTACTAC+AGG 0.549686 5_4:+2659596 None:intergenic
GCTTCGGTACATCCTGTCTC+CGG 0.550177 5_4:+2657837 None:intergenic
GAGAACAATACTTCCAGCAA+TGG 0.551966 5_4:-2657965 Msa0829620:CDS
GGATTCATGTATTCTTGAAG+TGG 0.553713 5_4:+2659026 None:intergenic
GAAAATGGCTCTTCATAGCA+TGG 0.555007 5_4:-2656952 Msa0829620:CDS
GAAGCAAAACGACGTCGTTG+AGG 0.556259 5_4:-2661973 Msa0829620:CDS
CTCCGGTGCAGCCGTACCGA+CGG 0.558644 5_4:-2662137 Msa0829620:CDS
TCAATGTTGCTGGATTCGAC+TGG 0.558744 5_4:-2659962 Msa0829620:CDS
GTCCAAGAATGTTGATAGAA+GGG 0.559262 5_4:-2661637 Msa0829620:CDS
TGGACGTTTGAGCAACATGT+TGG 0.562317 5_4:-2657495 Msa0829620:CDS
GCACCGCCATTGTCGGCCGT+CGG 0.566484 5_4:+2662121 None:intergenic
TAGAATACCTCAAAAGACAC+AGG 0.568733 5_4:-2657811 Msa0829620:CDS
ATTATAGTGAAGGTGAATTG+AGG 0.570035 5_4:-2661782 Msa0829620:CDS
GATCGAAGAAATGGAAGCTA+AGG 0.571565 5_4:-2659840 Msa0829620:CDS
ATCTGGTATGGACATCCAGC+AGG 0.572299 5_4:+2657456 None:intergenic
CTTTGATCTGTCTTGTGGAA+AGG 0.572886 5_4:+2657896 None:intergenic
CAATTGATGTCGAAAACTGT+AGG 0.580782 5_4:+2659662 None:intergenic
ATTGACTCTCCTGTAAAAGT+CGG 0.580898 5_4:+2658039 None:intergenic
ATTTGGATCCTCTACGACTG+TGG 0.580941 5_4:+2662369 None:intergenic
ACATGTTGCTCAAACGTCCA+TGG 0.584025 5_4:+2657498 None:intergenic
GCGGTGCAAACGTCGAGCGA+TGG 0.586207 5_4:-2662105 Msa0829620:CDS
ACTTCCAGCAATGGAGAATG+TGG 0.590983 5_4:-2657956 Msa0829620:CDS
GCCGTACCGACGGCCGACAA+TGG 0.594074 5_4:-2662127 Msa0829620:CDS
TACTCACAAAATGAGACTGA+AGG 0.605524 5_4:-2657623 Msa0829620:CDS
CTCTTATGACTCGTATGATG+TGG 0.606375 5_4:-2658877 Msa0829620:intron
AGCTTGTTTGGATTGGTGGG+AGG 0.607427 5_4:-2659474 Msa0829620:intron
GATACACTCAGCAACACTCT+CGG 0.607490 5_4:+2657161 None:intergenic
AGACGCTGAAACTAAATGGA+TGG 0.607729 5_4:-2659112 Msa0829620:CDS
AGCAAAAGTAGACAAGATTG+AGG 0.607925 5_4:-2657097 Msa0829620:intron
TTAGCTGCAAATATGACAGA+GGG 0.613711 5_4:-2658984 Msa0829620:CDS
TTTCTGGGTAAATTATGCAG+AGG 0.614277 5_4:+2662255 None:intergenic
ACATCTTAAGCATAGACTGT+AGG 0.615809 5_4:+2660129 None:intergenic
TTGAGGAAAGAATTGCCCAA+TGG 0.623011 5_4:-2661765 Msa0829620:CDS
GCATGGATTGCATTAAACAA+CGG 0.627109 5_4:-2661380 Msa0829620:intron
CCAGAGAGTATTGTAAGCGA+AGG 0.628849 5_4:-2658064 Msa0829620:CDS
TTATGCAGAGGAAAGTGAAG+AGG 0.629597 5_4:+2662267 None:intergenic
GTACCGACGGCCGACAATGG+CGG 0.630524 5_4:-2662124 Msa0829620:CDS
ATCGCATACCACAGTCGTAG+AGG 0.633364 5_4:-2662377 Msa0829620:five_prime_UTR
ACTGCAATGAGAAAATTGAC+TGG 0.635322 5_4:-2660296 Msa0829620:intron
AAACTCGTAAAGATCTAGCA+AGG 0.635952 5_4:-2656809 Msa0829620:three_prime_UTR
TGGAAGCAGATGGATCTCAT+CGG 0.640711 5_4:+2657131 None:intergenic
CCTGCAGTATTGTGTTCAAG+TGG 0.641105 5_4:-2657202 Msa0829620:intron
AACCACCTAGCTCTGAAGGA+GGG 0.641948 5_4:+2659909 None:intergenic
TTCAAGAATACATGAATCCG+AGG 0.642282 5_4:-2659022 Msa0829620:CDS
AACGAAGGAAGAATGTCCAC+CGG 0.642524 5_4:-2662165 Msa0829620:CDS
CAACCACCTAGCTCTGAAGG+AGG 0.643011 5_4:+2659908 None:intergenic
AAAACGAATACATGTTCTGG+AGG 0.643807 5_4:+2656851 None:intergenic
TGCCCTCCTTCAGAGCTAGG+TGG 0.645107 5_4:-2659911 Msa0829620:CDS
TGTTGTCAGACATTAAGTCA+AGG 0.648902 5_4:-2660109 Msa0829620:CDS
CACAGAACTCTGTGTCAAAG+GGG 0.648989 5_4:-2658127 Msa0829620:CDS
GCTCTCTTAAATATCAACCT+CGG 0.654056 5_4:-2659151 Msa0829620:CDS
GACTGAAAATGCAGAAGACG+CGG 0.655292 5_4:-2658098 Msa0829620:CDS
TCATTCCAGAAATCGAACCA+TGG 0.660202 5_4:-2657515 Msa0829620:intron
AGAATACCTCAAAAGACACA+GGG 0.667044 5_4:-2657810 Msa0829620:CDS
GAGAATTTATATGCTCAAAG+GGG 0.668555 5_4:+2660083 None:intergenic
AAATGTATTCTGTTGCTCAG+TGG 0.670307 5_4:-2657868 Msa0829620:CDS
TTTAGCTGCAAATATGACAG+AGG 0.672392 5_4:-2658985 Msa0829620:CDS
CGTCTCGGACTACTACAGGA+TGG 0.673684 5_4:+2659600 None:intergenic
TGTAGAGACAGGAACATCTG+TGG 0.673825 5_4:+2658186 None:intergenic
GTGAAAGTGAATTATAGTGA+AGG 0.674635 5_4:-2661792 Msa0829620:CDS
ACATCGGCAGAAGAAAGTGA+AGG 0.675093 5_4:-2662042 Msa0829620:CDS
AAATTCAGAAGACCGAACCT+CGG 0.675191 5_4:+2659005 None:intergenic
TTCTTGGACCTGAAGTAAGG+TGG 0.676401 5_4:+2661651 None:intergenic
AAGGCGTGTCCAGTTTGTCG+AGG 0.678559 5_4:-2660732 Msa0829620:CDS
ACAGAACTCTGTGTCAAAGG+GGG 0.691218 5_4:-2658126 Msa0829620:CDS
TCACAAAATGAGACTGAAGG+AGG 0.693419 5_4:-2657620 Msa0829620:CDS
CTGCACCGGAGATGGTCCGG+TGG 0.701773 5_4:+2662149 None:intergenic
TAAGCACAGAACAAGACCAG+AGG 0.721315 5_4:+2659545 None:intergenic
GAGGAAAGAATTGCCCAATG+GGG 0.722744 5_4:-2661763 Msa0829620:CDS
TAGCTGCAAATATGACAGAG+GGG 0.735019 5_4:-2658983 Msa0829620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATTTGATATATATTTATA+TGG + chr5_4:2656736-2656755 None:intergenic 10.0%
!!! AAAGGATTTTTTTTTTTTTA+GGG + chr5_4:2656770-2656789 None:intergenic 10.0%
!!! AAAAGGATTTTTTTTTTTTT+AGG + chr5_4:2656771-2656790 None:intergenic 10.0%
!! TTTATTCATTATACTTAATA+AGG - chr5_4:2658110-2658129 Msa0829620:CDS 10.0%
!! TATGTTCTTAATAATTATAA+TGG - chr5_4:2659810-2659829 Msa0829620:CDS 10.0%
!! ATATATATTTATATGGGATT+TGG + chr5_4:2656729-2656748 None:intergenic 15.0%
!!! TTTTTATCAATTTTTCTGAT+GGG + chr5_4:2656864-2656883 None:intergenic 15.0%
!!! ATTTTTATCAATTTTTCTGA+TGG + chr5_4:2656865-2656884 None:intergenic 15.0%
!!! AAAATTCAATTTTTTTCTCA+TGG - chr5_4:2656880-2656899 Msa0829620:exon 15.0%
!! ATAATGAATAAATATAAGCA+AGG + chr5_4:2658102-2658121 None:intergenic 15.0%
!!! AATTTGTTTCAACAAAAAAT+TGG + chr5_4:2658295-2658314 None:intergenic 15.0%
!!! TTTTTTGTTGAAACAAATTT+AGG - chr5_4:2658296-2658315 Msa0829620:intron 15.0%
!!! ATTGCTAAAGTATATTATTT+TGG - chr5_4:2659856-2659875 Msa0829620:CDS 15.0%
!! AGTAAAAAAAATTAAGGTTT+AGG + chr5_4:2660288-2660307 None:intergenic 15.0%
!! CAAGAAAGTAAAAAAAATTA+AGG + chr5_4:2660294-2660313 None:intergenic 15.0%
!!! TCAAATTTTACATTTGTTTT+TGG - chr5_4:2660570-2660589 Msa0829620:intron 15.0%
!! TTATATTATAGGAATATGAT+AGG + chr5_4:2661526-2661545 None:intergenic 15.0%
!! AGTCAATCTATTTATATTAT+AGG + chr5_4:2661537-2661556 None:intergenic 15.0%
!!! AATTAGGGTTTTTTTTTTCT+GGG + chr5_4:2656841-2656860 None:intergenic 20.0%
!!! GTGTAGATTATAGTATATTT+TGG - chr5_4:2657869-2657888 Msa0829620:CDS 20.0%
!! TTCAATGTTAACATATGTAT+CGG + chr5_4:2658017-2658036 None:intergenic 20.0%
!!! GATAGTTTTTTTTTCTTTAG+CGG - chr5_4:2658457-2658476 Msa0829620:intron 20.0%
!!! AATTTATCTTGTTTTGTAAC+AGG - chr5_4:2658496-2658515 Msa0829620:intron 20.0%
!!! GATATTGCATTTTCATTATT+TGG - chr5_4:2658550-2658569 Msa0829620:intron 20.0%
!!! TATATGATTTTATGTTTGAC+AGG - chr5_4:2658718-2658737 Msa0829620:intron 20.0%
!!! ATATGATTTTATGTTTGACA+GGG - chr5_4:2658719-2658738 Msa0829620:intron 20.0%
!! AAATACTAATTATGTTAGCA+AGG + chr5_4:2658858-2658877 None:intergenic 20.0%
!! ATTATCAATAGCAATAACTA+TGG + chr5_4:2659741-2659760 None:intergenic 20.0%
!!! TAGTTATTGCTATTGATAAT+TGG - chr5_4:2659741-2659760 Msa0829620:CDS 20.0%
!! ATAATAGAATTGAACAAACA+AGG + chr5_4:2659789-2659808 None:intergenic 20.0%
!!! ATACTTTAGCAATGTTTTTT+TGG + chr5_4:2659849-2659868 None:intergenic 20.0%
!! CATAAGAAATGTATACATAT+GGG + chr5_4:2660144-2660163 None:intergenic 20.0%
!! AATGCATAAAATATGATCAT+GGG + chr5_4:2660357-2660376 None:intergenic 20.0%
!! AAATGCATAAAATATGATCA+TGG + chr5_4:2660358-2660377 None:intergenic 20.0%
!! TTTCCTTATTATAACTTATG+AGG - chr5_4:2660524-2660543 Msa0829620:CDS 20.0%
!! TATAAACCATAATATTAACC+TGG + chr5_4:2660872-2660891 None:intergenic 20.0%
!!! TTTTTTTAGGGCTAAAAGAT+GGG + chr5_4:2656758-2656777 None:intergenic 25.0%
!!! TTTTTTTTAGGGCTAAAAGA+TGG + chr5_4:2656759-2656778 None:intergenic 25.0%
!! TCTGAGATATAGAAAAGAAA+AGG + chr5_4:2656788-2656807 None:intergenic 25.0%
!!! GAATTAGGGTTTTTTTTTTC+TGG + chr5_4:2656842-2656861 None:intergenic 25.0%
!! AATTTTTCTGATGGGAATTA+GGG + chr5_4:2656856-2656875 None:intergenic 25.0%
! CCACTTGAAAATTATCATAA+GGG + chr5_4:2657468-2657487 None:intergenic 25.0%
!!! CCTTATGATAATTTTCAAGT+GGG - chr5_4:2657466-2657485 Msa0829620:CDS 25.0%
! TGAGTATGAATTAGATATTC+TGG - chr5_4:2657759-2657778 Msa0829620:intron 25.0%
!! ATAACTTCTATACCAGTTTT+GGG - chr5_4:2658181-2658200 Msa0829620:CDS 25.0%
!!! TTATTTGTTTTATTACCGGA+AGG + chr5_4:2658586-2658605 None:intergenic 25.0%
!!! TCGCTTATTTGTTTTATTAC+CGG + chr5_4:2658590-2658609 None:intergenic 25.0%
!! TATGATTTTATGTTTGACAG+GGG - chr5_4:2658720-2658739 Msa0829620:intron 25.0%
!! GAGTTTTTATCCAAAATTTC+AGG + chr5_4:2659293-2659312 None:intergenic 25.0%
!!! AACTTAGTTTTTTCGTACTT+CGG + chr5_4:2659508-2659527 None:intergenic 25.0%
! AAGTACGAAAAAACTAAGTT+GGG - chr5_4:2659508-2659527 Msa0829620:CDS 25.0%
!! TATTGATAATTGGAATGCAT+TGG - chr5_4:2659751-2659770 Msa0829620:CDS 25.0%
! AAACTGTTCTTTGAATAGTT+GGG + chr5_4:2659999-2660018 None:intergenic 25.0%
! CCATAAGAAATGTATACATA+TGG + chr5_4:2660145-2660164 None:intergenic 25.0%
! CCATATGTATACATTTCTTA+TGG - chr5_4:2660142-2660161 Msa0829620:CDS 25.0%
! AAAATATGATCATGGGAATT+CGG + chr5_4:2660350-2660369 None:intergenic 25.0%
! AAAAATATGTACAAGGAACA+GGG + chr5_4:2660474-2660493 None:intergenic 25.0%
! AACAATAATATAAGATGCAG+CGG + chr5_4:2660551-2660570 None:intergenic 25.0%
! ATGATTCAACCATTGAATAA+TGG + chr5_4:2660744-2660763 None:intergenic 25.0%
! TCAAGAACAGTTGAAATATT+TGG + chr5_4:2661727-2661746 None:intergenic 25.0%
! AAAAAAACGAATACATGTTC+TGG + chr5_4:2662233-2662252 None:intergenic 25.0%
! TTTACTGTAGATACTTCAAT+TGG - chr5_4:2662309-2662328 Msa0829620:five_prime_UTR 25.0%
! ATTTATTTCAGATTCAGGTA+AGG + chr5_4:2662383-2662402 None:intergenic 25.0%
! CAATTTTTCTGATGGGAATT+AGG + chr5_4:2656857-2656876 None:intergenic 30.0%
ATCATCTTCAACTTCAACAT+CGG - chr5_4:2657020-2657039 Msa0829620:intron 30.0%
GCAATTGGATTTGATAAGAA+TGG - chr5_4:2657186-2657205 Msa0829620:CDS 30.0%
TTCTGCACATTCTTCTTATT+CGG + chr5_4:2657244-2657263 None:intergenic 30.0%
! TGTTGATGAAGAATTGGAAT+TGG - chr5_4:2657264-2657283 Msa0829620:intron 30.0%
GTGAAAGTGAATTATAGTGA+AGG - chr5_4:2657286-2657305 Msa0829620:intron 30.0%
ATTATAGTGAAGGTGAATTG+AGG - chr5_4:2657296-2657315 Msa0829620:intron 30.0%
!!! GTTGTTGATTTTCACTGTAA+TGG - chr5_4:2657388-2657407 Msa0829620:intron 30.0%
!! CCCTTATGATAATTTTCAAG+TGG - chr5_4:2657465-2657484 Msa0829620:CDS 30.0%
CCCACTTGAAAATTATCATA+AGG + chr5_4:2657469-2657488 None:intergenic 30.0%
TGTTGTTGTGTACTAATGTT+TGG - chr5_4:2657542-2657561 Msa0829620:intron 30.0%
!!! TTTGGTTGTTTTGTTGTTGT+TGG - chr5_4:2657560-2657579 Msa0829620:intron 30.0%
!!! TTGGTTGTTTTGTTGTTGTT+GGG - chr5_4:2657561-2657580 Msa0829620:intron 30.0%
!!! TTGGGTTTCTGTGTTTTTTA+AGG - chr5_4:2657579-2657598 Msa0829620:intron 30.0%
!!! TTAAGGTTTTGAAGAAGTGT+AGG - chr5_4:2657596-2657615 Msa0829620:intron 30.0%
TATTGTCTGTTGTGCATATA+TGG - chr5_4:2657786-2657805 Msa0829620:CDS 30.0%
!!! TGTGTTTTGATTTGTAAGCA+CGG - chr5_4:2657921-2657940 Msa0829620:CDS 30.0%
TATAGAAGTTATCATGGAGT+TGG + chr5_4:2658173-2658192 None:intergenic 30.0%
AACTGGTATAGAAGTTATCA+TGG + chr5_4:2658179-2658198 None:intergenic 30.0%
! GATAACTTCTATACCAGTTT+TGG - chr5_4:2658180-2658199 Msa0829620:CDS 30.0%
! TGTTTTGTAACAGGATTGTT+TGG - chr5_4:2658505-2658524 Msa0829620:intron 30.0%
GAAACAGAAGCGAAAAATAA+AGG - chr5_4:2658629-2658648 Msa0829620:intron 30.0%
GAGAATTTATATGCTCAAAG+GGG + chr5_4:2658998-2659017 None:intergenic 30.0%
GGAGAATTTATATGCTCAAA+GGG + chr5_4:2658999-2659018 None:intergenic 30.0%
TGGAGAATTTATATGCTCAA+AGG + chr5_4:2659000-2659019 None:intergenic 30.0%
AAATGCTCTTGTCTTCTAAA+AGG + chr5_4:2659073-2659092 None:intergenic 30.0%
GAAAAACACATCTCAAATCA+AGG + chr5_4:2659208-2659227 None:intergenic 30.0%
! CTATGAAGTTCCTGAAATTT+TGG - chr5_4:2659280-2659299 Msa0829620:intron 30.0%
TTGAACACTTTCAAAAACAC+TGG - chr5_4:2659447-2659466 Msa0829620:intron 30.0%
TGAACACTTTCAAAAACACT+GGG - chr5_4:2659448-2659467 Msa0829620:intron 30.0%
GAAGTACGAAAAAACTAAGT+TGG - chr5_4:2659507-2659526 Msa0829620:CDS 30.0%
!!! AGCAATGTTTTTTTGGTTCA+TGG + chr5_4:2659842-2659861 None:intergenic 30.0%
!!! TTATTTTGGAACTCTTACTC+TGG - chr5_4:2659870-2659889 Msa0829620:CDS 30.0%
! AACATTAGACAGCATTTTAC+TGG - chr5_4:2659905-2659924 Msa0829620:CDS 30.0%
GAAACTGTTCTTTGAATAGT+TGG + chr5_4:2660000-2660019 None:intergenic 30.0%
TTTCTTGAATATATCTGCTC+TGG - chr5_4:2660251-2660270 Msa0829620:intron 30.0%
GCATTTATCTTGTGATAACT+CGG - chr5_4:2660372-2660391 Msa0829620:intron 30.0%
CAAAAATATGTACAAGGAAC+AGG + chr5_4:2660475-2660494 None:intergenic 30.0%
! CTGTTCCTTGTACATATTTT+TGG - chr5_4:2660473-2660492 Msa0829620:CDS 30.0%
ACAATAATATAAGATGCAGC+GGG + chr5_4:2660550-2660569 None:intergenic 30.0%
!!! TTTTGGTCTTATTAGTCATG+TGG - chr5_4:2660587-2660606 Msa0829620:intron 30.0%
! TTTGTCTCTTTTTGTCAAAC+TGG - chr5_4:2660712-2660731 Msa0829620:CDS 30.0%
AATTATCTGACGAAGTACAA+TGG + chr5_4:2660805-2660824 None:intergenic 30.0%
! TATGTATGATTTGTGATTCC+AGG - chr5_4:2660851-2660870 Msa0829620:intron 30.0%
GTGATTCCAGGTTAATATTA+TGG - chr5_4:2660863-2660882 Msa0829620:intron 30.0%
! TTGAGGTATTCTAAAAGCTT+CGG + chr5_4:2661260-2661279 None:intergenic 30.0%
ACTCAAACAAGATCATGTTA+AGG + chr5_4:2661362-2661381 None:intergenic 30.0%
TTAGAATTCCTAATCTGGTA+TGG + chr5_4:2661637-2661656 None:intergenic 30.0%
ATACCAGATTAGGAATTCTA+AGG - chr5_4:2661636-2661655 Msa0829620:CDS 30.0%
ACTTCGAAATTATACACTTC+TGG - chr5_4:2661753-2661772 Msa0829620:CDS 30.0%
TCATAGAAGAAAGCAAGAAT+TGG + chr5_4:2662048-2662067 None:intergenic 30.0%
ATGAAAACAGGTGAAGAAAA+TGG - chr5_4:2662111-2662130 Msa0829620:CDS 30.0%
!! AGTTCAATCATGTTTTGGAT+TGG + chr5_4:2662185-2662204 None:intergenic 30.0%
! TAGCAAGTTCAATCATGTTT+TGG + chr5_4:2662190-2662209 None:intergenic 30.0%
TTTCTGGGTAAATTATGCAG+AGG + chr5_4:2656826-2656845 None:intergenic 35.0%
CATGGTGAAAAAATCAACGA+AGG - chr5_4:2656898-2656917 Msa0829620:exon 35.0%
! GCAGAATGTTGATGAAGAAT+TGG - chr5_4:2657258-2657277 Msa0829620:intron 35.0%
! GTCCAAGAATGTTGATAGAA+GGG - chr5_4:2657441-2657460 Msa0829620:intron 35.0%
! GCATGGATTGCATTAAACAA+CGG - chr5_4:2657698-2657717 Msa0829620:intron 35.0%
!! CATATGTATCGGTGTTTTGT+TGG + chr5_4:2658006-2658025 None:intergenic 35.0%
TCACTGTCTCCGATTATTAT+CGG - chr5_4:2658042-2658061 Msa0829620:CDS 35.0%
AGTTGGATGTACAAAACACA+GGG + chr5_4:2658156-2658175 None:intergenic 35.0%
TGGTCAAATATCAAACAGTG+CGG + chr5_4:2658217-2658236 None:intergenic 35.0%
ACAGGTGACAGAAATCATAT+TGG + chr5_4:2658237-2658256 None:intergenic 35.0%
GATTATGAGCATACAAGTAC+AGG + chr5_4:2658255-2658274 None:intergenic 35.0%
GTATTTCGACACTCAAAATG+AGG - chr5_4:2658318-2658337 Msa0829620:intron 35.0%
CACTCAAAATGAGGTTAAGA+AGG - chr5_4:2658327-2658346 Msa0829620:intron 35.0%
GATATCAGACCTTACTTTCA+CGG + chr5_4:2658414-2658433 None:intergenic 35.0%
ACTGCAATGAGAAAATTGAC+TGG - chr5_4:2658782-2658801 Msa0829620:intron 35.0%
CTTCTGTGAAGATTCAGAAT+AGG + chr5_4:2658915-2658934 None:intergenic 35.0%
ATAGACTGTAGGAACAGTTA+AGG + chr5_4:2658941-2658960 None:intergenic 35.0%
ACATCTTAAGCATAGACTGT+AGG + chr5_4:2658952-2658971 None:intergenic 35.0%
TGTTGTCAGACATTAAGTCA+AGG - chr5_4:2658969-2658988 Msa0829620:CDS 35.0%
ATTTCTTCGATCCAGCTTAT+CGG + chr5_4:2659230-2659249 None:intergenic 35.0%
CAATTGATGTCGAAAACTGT+AGG + chr5_4:2659419-2659438 None:intergenic 35.0%
GAACACTTTCAAAAACACTG+GGG - chr5_4:2659449-2659468 Msa0829620:intron 35.0%
AACACTTTCAAAAACACTGG+GGG - chr5_4:2659450-2659469 Msa0829620:intron 35.0%
TGTTCTGTGCTTATCTTGAA+AGG - chr5_4:2659543-2659562 Msa0829620:CDS 35.0%
! AGACTTACTTGAAGCTTGTT+TGG - chr5_4:2659592-2659611 Msa0829620:CDS 35.0%
! TACTTGAAGCTTGTTTGGAT+TGG - chr5_4:2659597-2659616 Msa0829620:CDS 35.0%
GCTCTCTTAAATATCAACCT+CGG - chr5_4:2659927-2659946 Msa0829620:CDS 35.0%
ATCAACCTCGGAAAAATGAT+TGG - chr5_4:2659939-2659958 Msa0829620:CDS 35.0%
ATTACTTCAGCAAAATGAGC+TGG + chr5_4:2660022-2660041 None:intergenic 35.0%
! GCTCATTTTGCTGAAGTAAT+TGG - chr5_4:2660022-2660041 Msa0829620:CDS 35.0%
GGATTCATGTATTCTTGAAG+TGG + chr5_4:2660055-2660074 None:intergenic 35.0%
TTCAAGAATACATGAATCCG+AGG - chr5_4:2660056-2660075 Msa0829620:CDS 35.0%
TTTAGCTGCAAATATGACAG+AGG - chr5_4:2660093-2660112 Msa0829620:CDS 35.0%
TTAGCTGCAAATATGACAGA+GGG - chr5_4:2660094-2660113 Msa0829620:CDS 35.0%
AGAGCAGCAATACATGATAA+AGG - chr5_4:2660118-2660137 Msa0829620:CDS 35.0%
! TAACTCGGTATCTCATCTTT+TGG - chr5_4:2660387-2660406 Msa0829620:intron 35.0%
!! TGGAATAAAAAGCATCCTCT+TGG - chr5_4:2660407-2660426 Msa0829620:intron 35.0%
TCTTGGAATGCTTCTTACTT+GGG - chr5_4:2660424-2660443 Msa0829620:intron 35.0%
! GGGTTTTCATCATATACAAG+TGG + chr5_4:2660454-2660473 None:intergenic 35.0%
GGGCCTCATAAGTTATAATA+AGG + chr5_4:2660530-2660549 None:intergenic 35.0%
! ATTGACTCTCCTGTAAAAGT+CGG + chr5_4:2661042-2661061 None:intergenic 35.0%
AAATGTATTCTGTTGCTCAG+TGG - chr5_4:2661210-2661229 Msa0829620:intron 35.0%
AATGTATTCTGTTGCTCAGT+GGG - chr5_4:2661211-2661230 Msa0829620:intron 35.0%
TAGAATACCTCAAAAGACAC+AGG - chr5_4:2661267-2661286 Msa0829620:intron 35.0%
AGAATACCTCAAAAGACACA+GGG - chr5_4:2661268-2661287 Msa0829620:intron 35.0%
! AGATGCTCTGATCTAGAATT+GGG + chr5_4:2661425-2661444 None:intergenic 35.0%
! AAGATGCTCTGATCTAGAAT+TGG + chr5_4:2661426-2661445 None:intergenic 35.0%
TACTCACAAAATGAGACTGA+AGG - chr5_4:2661455-2661474 Msa0829620:CDS 35.0%
! TACAAATGCATGGGTTATTG+TGG + chr5_4:2661500-2661519 None:intergenic 35.0%
GATAGGTGATACAAATGCAT+GGG + chr5_4:2661509-2661528 None:intergenic 35.0%
TGATAGGTGATACAAATGCA+TGG + chr5_4:2661510-2661529 None:intergenic 35.0%
AGACCTTAGAATTCCTAATC+TGG + chr5_4:2661642-2661661 None:intergenic 35.0%
GTATTGTGTTCAAGTGGTAT+TGG - chr5_4:2661882-2661901 Msa0829620:CDS 35.0%
!! TCTTGTCTACTTTTGCTTTG+TGG + chr5_4:2661978-2661997 None:intergenic 35.0%
AGCAAAAGTAGACAAGATTG+AGG - chr5_4:2661981-2662000 Msa0829620:CDS 35.0%
AGAAGAAAGCAAGAATTGGA+AGG + chr5_4:2662044-2662063 None:intergenic 35.0%
AAAACGAATACATGTTCTGG+AGG + chr5_4:2662230-2662249 None:intergenic 35.0%
AAACTCGTAAAGATCTAGCA+AGG - chr5_4:2662269-2662288 Msa0829620:five_prime_UTR 35.0%
TTATGCAGAGGAAAGTGAAG+AGG + chr5_4:2656814-2656833 None:intergenic 40.0%
ACGTCGTTGAGGTTGAAATT+AGG - chr5_4:2657116-2657135 Msa0829620:CDS 40.0%
!! AAGAATGGTGTTACAGAGAG+AGG - chr5_4:2657201-2657220 Msa0829620:intron 40.0%
TTGAGGAAAGAATTGCCCAA+TGG - chr5_4:2657313-2657332 Msa0829620:intron 40.0%
TGAGGAAAGAATTGCCCAAT+GGG - chr5_4:2657314-2657333 Msa0829620:intron 40.0%
GCAATTTCCATAACCCCATT+GGG + chr5_4:2657331-2657350 None:intergenic 40.0%
AGCAATTTCCATAACCCCAT+TGG + chr5_4:2657332-2657351 None:intergenic 40.0%
TTGTTACACCACCTTACTTC+AGG - chr5_4:2657419-2657438 Msa0829620:intron 40.0%
ACATTCTTGGACCTGAAGTA+AGG + chr5_4:2657433-2657452 None:intergenic 40.0%
! GGTCCAAGAATGTTGATAGA+AGG - chr5_4:2657440-2657459 Msa0829620:intron 40.0%
GACCCTTCTATCAACATTCT+TGG + chr5_4:2657446-2657465 None:intergenic 40.0%
!!! AGGTTTTGAAGAAGTGTAGG+AGG - chr5_4:2657599-2657618 Msa0829620:intron 40.0%
CCATGCAGAAAAACTCTTTC+TGG + chr5_4:2657684-2657703 None:intergenic 40.0%
! CCAGAAAGAGTTTTTCTGCA+TGG - chr5_4:2657681-2657700 Msa0829620:intron 40.0%
GGATTGCATTAAACAACGGT+TGG - chr5_4:2657702-2657721 Msa0829620:intron 40.0%
ACGTCGACACCGATAATAAT+CGG + chr5_4:2658054-2658073 None:intergenic 40.0%
TATAAGCAAGGACACAGACA+CGG + chr5_4:2658090-2658109 None:intergenic 40.0%
TACAAAACACAGGGGTGAAA+TGG + chr5_4:2658147-2658166 None:intergenic 40.0%
GTTGGATGTACAAAACACAG+GGG + chr5_4:2658155-2658174 None:intergenic 40.0%
GAGTTGGATGTACAAAACAC+AGG + chr5_4:2658157-2658176 None:intergenic 40.0%
GGTACTAGTATTCCCAAAAC+TGG + chr5_4:2658196-2658215 None:intergenic 40.0%
GTGTAAAGACCGTGAAAGTA+AGG - chr5_4:2658402-2658421 Msa0829620:intron 40.0%
TTGTAACAGGATTGTTTGGC+TGG - chr5_4:2658509-2658528 Msa0829620:intron 40.0%
TTGTCAGGTAACTCAGTCAA+TGG + chr5_4:2659020-2659039 None:intergenic 40.0%
GACTGAGTTACCTGACAAAA+TGG - chr5_4:2659022-2659041 Msa0829620:CDS 40.0%
! ATGCAAGTGTCCATTTTGTC+AGG + chr5_4:2659035-2659054 None:intergenic 40.0%
AACTGATACGTCAATGTTGC+TGG - chr5_4:2659106-2659125 Msa0829620:CDS 40.0%
!!! CTGGATTCGACTGGTTTTAA+CGG - chr5_4:2659125-2659144 Msa0829620:CDS 40.0%
! GATGTGTTTTTCCGATAAGC+TGG - chr5_4:2659216-2659235 Msa0829620:intron 40.0%
GATAAGCTGGATCGAAGAAA+TGG - chr5_4:2659229-2659248 Msa0829620:intron 40.0%
GATCGAAGAAATGGAAGCTA+AGG - chr5_4:2659238-2659257 Msa0829620:intron 40.0%
TTTCAAAAACACTGGGGGAA+AGG - chr5_4:2659455-2659474 Msa0829620:intron 40.0%
! AAAACTAAGTTGGGATCCTC+TGG - chr5_4:2659517-2659536 Msa0829620:CDS 40.0%
! TTGAAGCTTGTTTGGATTGG+TGG - chr5_4:2659600-2659619 Msa0829620:CDS 40.0%
!! TGAAGCTTGTTTGGATTGGT+GGG - chr5_4:2659601-2659620 Msa0829620:CDS 40.0%
!! TCATGCCAATCATTTTTCCG+AGG + chr5_4:2659947-2659966 None:intergenic 40.0%
CATGAGACGCTGAAACTAAA+TGG - chr5_4:2659962-2659981 Msa0829620:CDS 40.0%
AGACGCTGAAACTAAATGGA+TGG - chr5_4:2659966-2659985 Msa0829620:CDS 40.0%
GAATACATGAATCCGAGGTT+CGG - chr5_4:2660061-2660080 Msa0829620:CDS 40.0%
AAATTCAGAAGACCGAACCT+CGG + chr5_4:2660076-2660095 None:intergenic 40.0%
TAGCTGCAAATATGACAGAG+GGG - chr5_4:2660095-2660114 Msa0829620:CDS 40.0%
CTCTTATGACTCGTATGATG+TGG - chr5_4:2660201-2660220 Msa0829620:intron 40.0%
CATGGGAATTCGGTTGTATT+TGG + chr5_4:2660340-2660359 None:intergenic 40.0%
!! CAAGTAAGAAGCATTCCAAG+AGG + chr5_4:2660425-2660444 None:intergenic 40.0%
CTCTTGGAATGCTTCTTACT+TGG - chr5_4:2660423-2660442 Msa0829620:intron 40.0%
GCTCGCCAAAAATATGTACA+AGG + chr5_4:2660481-2660500 None:intergenic 40.0%
TGGCGTGTACCATTATTCAA+TGG - chr5_4:2660732-2660751 Msa0829620:CDS 40.0%
!! ATGGAGTACTGCTATTTGAC+AGG + chr5_4:2660778-2660797 None:intergenic 40.0%
TATCTGACGAAGTACAATGG+AGG + chr5_4:2660802-2660821 None:intergenic 40.0%
GTAAGATGTTCTGTAGAGAC+AGG + chr5_4:2660906-2660925 None:intergenic 40.0%
GAGAACAATACTTCCAGCAA+TGG - chr5_4:2661113-2661132 Msa0829620:intron 40.0%
CTTTGATCTGTCTTGTGGAA+AGG + chr5_4:2661185-2661204 None:intergenic 40.0%
! ATTCATCCCTGTGTCTTTTG+AGG + chr5_4:2661277-2661296 None:intergenic 40.0%
CTTATTGCTGTCATACTCGT+TGG + chr5_4:2661309-2661328 None:intergenic 40.0%
CAACGAGTATGACAGCAATA+AGG - chr5_4:2661307-2661326 Msa0829620:intron 40.0%
! TCTAGATCAGAGCATCTTTC+TGG - chr5_4:2661428-2661447 Msa0829620:CDS 40.0%
TCACAAAATGAGACTGAAGG+AGG - chr5_4:2661458-2661477 Msa0829620:CDS 40.0%
TCATTCCAGAAATCGAACCA+TGG - chr5_4:2661563-2661582 Msa0829620:intron 40.0%
! ACTTTTGCTTTGTGGTTCTC+TGG + chr5_4:2661970-2661989 None:intergenic 40.0%
TCTTTCGTGCACATGAAAAC+AGG - chr5_4:2662099-2662118 Msa0829620:CDS 40.0%
GAAAATGGCTCTTCATAGCA+TGG - chr5_4:2662126-2662145 Msa0829620:CDS 40.0%
ATTTGGATCCTCTACGACTG+TGG + chr5_4:2656712-2656731 None:intergenic 45.0%
AACGAAGGAAGAATGTCCAC+CGG - chr5_4:2656913-2656932 Msa0829620:CDS 45.0%
ACATCGGCAGAAGAAAGTGA+AGG - chr5_4:2657036-2657055 Msa0829620:intron 45.0%
CGATGCTGTTGATGTGCAAT+TGG - chr5_4:2657171-2657190 Msa0829620:CDS 45.0%
GAGGAAAGAATTGCCCAATG+GGG - chr5_4:2657315-2657334 Msa0829620:intron 45.0%
AGAATTGCCCAATGGGGTTA+TGG - chr5_4:2657321-2657340 Msa0829620:intron 45.0%
TTCTTGGACCTGAAGTAAGG+TGG + chr5_4:2657430-2657449 None:intergenic 45.0%
!! GTAGGAGGAAGAAGTGTCAT+TGG - chr5_4:2657614-2657633 Msa0829620:CDS 45.0%
TTGTAAGCACGGACACTTCT+CGG - chr5_4:2657932-2657951 Msa0829620:CDS 45.0%
!! TATCGGTGTTTTGTTGGTGC+TGG + chr5_4:2658000-2658019 None:intergenic 45.0%
GAACAAGTTCCTCGACAAAC+TGG + chr5_4:2658358-2658377 None:intergenic 45.0%
!! GGTCTTTACACTGACTTGCT+CGG + chr5_4:2658393-2658412 None:intergenic 45.0%
! CTGGTACAAGCAGAGTTGAT+AGG - chr5_4:2658528-2658547 Msa0829620:intron 45.0%
TTTGGTCTGTATGCTCCTTC+CGG - chr5_4:2658568-2658587 Msa0829620:intron 45.0%
TCAATGTTGCTGGATTCGAC+TGG - chr5_4:2659116-2659135 Msa0829620:CDS 45.0%
TAAGCACAGAACAAGACCAG+AGG + chr5_4:2659536-2659555 None:intergenic 45.0%
! TTTGGAACTCTTACTCTGGC+AGG - chr5_4:2659874-2659893 Msa0829620:CDS 45.0%
TGTAGAGACAGGAACATCTG+TGG + chr5_4:2660895-2660914 None:intergenic 45.0%
AGCACAGAACTCTGTGTCAA+AGG - chr5_4:2660949-2660968 Msa0829620:intron 45.0%
GCACAGAACTCTGTGTCAAA+GGG - chr5_4:2660950-2660969 Msa0829620:intron 45.0%
CACAGAACTCTGTGTCAAAG+GGG - chr5_4:2660951-2660970 Msa0829620:intron 45.0%
ACAGAACTCTGTGTCAAAGG+GGG - chr5_4:2660952-2660971 Msa0829620:intron 45.0%
! GCGTCTTCTGCATTTTCAGT+CGG + chr5_4:2660981-2661000 None:intergenic 45.0%
GACTGAAAATGCAGAAGACG+CGG - chr5_4:2660980-2660999 Msa0829620:intron 45.0%
CCTTCGCTTACAATACTCTC+TGG + chr5_4:2661017-2661036 None:intergenic 45.0%
!! CCAGAGAGTATTGTAAGCGA+AGG - chr5_4:2661014-2661033 Msa0829620:intron 45.0%
ACTTCCAGCAATGGAGAATG+TGG - chr5_4:2661122-2661141 Msa0829620:intron 45.0%
AGAACCACATTCTCCATTGC+TGG + chr5_4:2661129-2661148 None:intergenic 45.0%
AGCAATGGAGAATGTGGTTC+TGG - chr5_4:2661128-2661147 Msa0829620:intron 45.0%
CAGTGCTTTGATCTGTCTTG+TGG + chr5_4:2661190-2661209 None:intergenic 45.0%
ATGAGACTGAAGGAGGAGTT+TGG - chr5_4:2661465-2661484 Msa0829620:CDS 45.0%
AACGTCCATGGTTCGATTTC+TGG + chr5_4:2661571-2661590 None:intergenic 45.0%
ACATGTTGCTCAAACGTCCA+TGG + chr5_4:2661583-2661602 None:intergenic 45.0%
TGGACGTTTGAGCAACATGT+TGG - chr5_4:2661583-2661602 Msa0829620:intron 45.0%
GAAGCTATCATCATTCCTGC+TGG - chr5_4:2661607-2661626 Msa0829620:intron 45.0%
CTGGATGTCCATACCAGATT+AGG - chr5_4:2661626-2661645 Msa0829620:CDS 45.0%
CCACTTGAACACAATACTGC+AGG + chr5_4:2661879-2661898 None:intergenic 45.0%
CCTGCAGTATTGTGTTCAAG+TGG - chr5_4:2661876-2661895 Msa0829620:CDS 45.0%
GATACACTCAGCAACACTCT+CGG + chr5_4:2661920-2661939 None:intergenic 45.0%
GATGGATCTCATCGGTCAAT+TGG + chr5_4:2661942-2661961 None:intergenic 45.0%
TGGAAGCAGATGGATCTCAT+CGG + chr5_4:2661950-2661969 None:intergenic 45.0%
GGCTCTTCATAGCATGGATA+TGG - chr5_4:2662132-2662151 Msa0829620:CDS 45.0%
!! TATTTGATATATATTTATAT+GGG + chr5_4:2656735-2656754 None:intergenic 5.0%
!!! TATTATTTTTATTTTTTTTG+CGG - chr5_4:2662346-2662365 Msa0829620:five_prime_UTR 5.0%
ATCGCATACCACAGTCGTAG+AGG - chr5_4:2656701-2656720 Msa0829620:three_prime_UTR 50.0%
!! CTCTGAAGCTTCAACGACTC+TGG + chr5_4:2657064-2657083 None:intergenic 50.0%
GAAGCAAAACGACGTCGTTG+AGG - chr5_4:2657105-2657124 Msa0829620:CDS 50.0%
TCACGACGTGAAGTCGAAAC+AGG + chr5_4:2657355-2657374 None:intergenic 50.0%
!! CTGTTTCTAGCTCTGCATGC+TGG + chr5_4:2658616-2658635 None:intergenic 50.0%
!! AACCACCTAGCTCTGAAGGA+GGG + chr5_4:2659172-2659191 None:intergenic 50.0%
!! AGCTTGTTTGGATTGGTGGG+AGG - chr5_4:2659604-2659623 Msa0829620:CDS 50.0%
GACGAAGTACAATGGAGGCA+TGG + chr5_4:2660797-2660816 None:intergenic 50.0%
TGCAGAAGACGCGGAACAAA+AGG - chr5_4:2660989-2661008 Msa0829620:intron 50.0%
!! GCGAAGGAACCGACTTTTAC+AGG - chr5_4:2661030-2661049 Msa0829620:intron 50.0%
TTGCTCAGTGGGATGTCTTC+CGG - chr5_4:2661222-2661241 Msa0829620:intron 50.0%
ATCTGGTATGGACATCCAGC+AGG + chr5_4:2661625-2661644 None:intergenic 50.0%
! TGTGGTTCTCTGGAAGCAGA+TGG + chr5_4:2661960-2661979 None:intergenic 50.0%
AATGTCCACCGGACCATCTC+CGG - chr5_4:2656924-2656943 Msa0829620:CDS 55.0%
GACGTTTGCACCGCCATTGT+CGG + chr5_4:2656967-2656986 None:intergenic 55.0%
ACACAGACACGGACACGACA+CGG + chr5_4:2658079-2658098 None:intergenic 55.0%
AAGGCGTGTCCAGTTTGTCG+AGG - chr5_4:2658346-2658365 Msa0829620:intron 55.0%
TCATGCCCTCCTTCAGAGCT+AGG - chr5_4:2659164-2659183 Msa0829620:CDS 55.0%
!! CAACCACCTAGCTCTGAAGG+AGG + chr5_4:2659173-2659192 None:intergenic 55.0%
!! CCACAACCACCTAGCTCTGA+AGG + chr5_4:2659176-2659195 None:intergenic 55.0%
CCTTCAGAGCTAGGTGGTTG+TGG - chr5_4:2659173-2659192 Msa0829620:CDS 55.0%
CGTCTCGGACTACTACAGGA+TGG + chr5_4:2659481-2659500 None:intergenic 55.0%
AGCACGTCTCGGACTACTAC+AGG + chr5_4:2659485-2659504 None:intergenic 55.0%
TCGTACTTCGGAGCACGTCT+CGG + chr5_4:2659496-2659515 None:intergenic 55.0%
GCTTCGGTACATCCTGTCTC+CGG + chr5_4:2661244-2661263 None:intergenic 55.0%
GCACGGACACTTCTCGGAGT+AGG - chr5_4:2657938-2657957 Msa0829620:CDS 60.0%
ACCGACGCGTGTCCAACATC+GGG + chr5_4:2657975-2657994 None:intergenic 60.0%
CACCGACGCGTGTCCAACAT+CGG + chr5_4:2657976-2657995 None:intergenic 60.0%
TGCCCTCCTTCAGAGCTAGG+TGG - chr5_4:2659167-2659186 Msa0829620:CDS 60.0%
GTGGGATGTCTTCCGGAGAC+AGG - chr5_4:2661229-2661248 Msa0829620:intron 60.0%
GCCATTGTCGGCCGTCGGTA+CGG + chr5_4:2656955-2656974 None:intergenic 65.0%
! GTACCGACGGCCGACAATGG+CGG - chr5_4:2656954-2656973 Msa0829620:CDS 65.0%
GCGGTGCAAACGTCGAGCGA+TGG - chr5_4:2656973-2656992 Msa0829620:intron 65.0%
GCGTGTCGTGTCCCCGATGT+TGG - chr5_4:2657960-2657979 Msa0829620:CDS 65.0%
CCGACGCGTGTCCAACATCG+GGG + chr5_4:2657974-2657993 None:intergenic 65.0%
CCCCGATGTTGGACACGCGT+CGG - chr5_4:2657971-2657990 Msa0829620:CDS 65.0%
CTGCACCGGAGATGGTCCGG+TGG + chr5_4:2656932-2656951 None:intergenic 70.0%
CGGCTGCACCGGAGATGGTC+CGG + chr5_4:2656935-2656954 None:intergenic 70.0%
CGGTACGGCTGCACCGGAGA+TGG + chr5_4:2656940-2656959 None:intergenic 70.0%
CTCCGGTGCAGCCGTACCGA+CGG - chr5_4:2656941-2656960 Msa0829620:CDS 70.0%
! GCCGTACCGACGGCCGACAA+TGG - chr5_4:2656951-2656970 Msa0829620:CDS 70.0%
GCACCGCCATTGTCGGCCGT+CGG + chr5_4:2656960-2656979 None:intergenic 70.0%
GGCCGTCGGTACGGCTGCAC+CGG + chr5_4:2656946-2656965 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 2656698 2662402 2656698 ID=Msa0829620;Name=Msa0829620
chr5_4 mRNA 2656698 2662402 2656698 ID=Msa0829620-mRNA-1;Parent=Msa0829620;Name=Msa0829620-mRNA-1;_AED=0.09;_eAED=0.09;_QI=201|1|1|1|1|1|12|201|959
chr5_4 exon 2656698 2656979 2656698 ID=Msa0829620-mRNA-1:exon:925;Parent=Msa0829620-mRNA-1
chr5_4 exon 2657098 2657217 2657098 ID=Msa0829620-mRNA-1:exon:924;Parent=Msa0829620-mRNA-1
chr5_4 exon 2657443 2657528 2657443 ID=Msa0829620-mRNA-1:exon:923;Parent=Msa0829620-mRNA-1
chr5_4 exon 2657614 2657686 2657614 ID=Msa0829620-mRNA-1:exon:922;Parent=Msa0829620-mRNA-1
chr5_4 exon 2657772 2658227 2657772 ID=Msa0829620-mRNA-1:exon:921;Parent=Msa0829620-mRNA-1
chr5_4 exon 2658878 2659204 2658878 ID=Msa0829620-mRNA-1:exon:920;Parent=Msa0829620-mRNA-1
chr5_4 exon 2659475 2660204 2659475 ID=Msa0829620-mRNA-1:exon:919;Parent=Msa0829620-mRNA-1
chr5_4 exon 2660297 2660360 2660297 ID=Msa0829620-mRNA-1:exon:918;Parent=Msa0829620-mRNA-1
chr5_4 exon 2660450 2660582 2660450 ID=Msa0829620-mRNA-1:exon:917;Parent=Msa0829620-mRNA-1
chr5_4 exon 2660677 2660782 2660677 ID=Msa0829620-mRNA-1:exon:916;Parent=Msa0829620-mRNA-1
chr5_4 exon 2661381 2661499 2661381 ID=Msa0829620-mRNA-1:exon:915;Parent=Msa0829620-mRNA-1
chr5_4 exon 2661617 2662402 2661617 ID=Msa0829620-mRNA-1:exon:914;Parent=Msa0829620-mRNA-1
chr5_4 five_prime_UTR 2662202 2662402 2662202 ID=Msa0829620-mRNA-1:five_prime_utr;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2661617 2662201 2661617 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2661381 2661499 2661381 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2660677 2660782 2660677 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2660450 2660582 2660450 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2660297 2660360 2660297 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2659475 2660204 2659475 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2658878 2659204 2658878 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2657772 2658227 2657772 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2657614 2657686 2657614 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2657443 2657528 2657443 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2657098 2657217 2657098 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 CDS 2656899 2656979 2656899 ID=Msa0829620-mRNA-1:cds;Parent=Msa0829620-mRNA-1
chr5_4 three_prime_UTR 2656698 2656898 2656698 ID=Msa0829620-mRNA-1:three_prime_utr;Parent=Msa0829620-mRNA-1
Gene Sequence

>Msa0829620

ATGGTGAAAAAATCAACGAAGGAAGAATGTCCACCGGACCATCTCCGGTGCAGCCGTACCGACGGCCGACAATGGCGGTGCAAACGTCGAGCGATGGAAAACGTGAAGTTATGCGAAGTTCATCATCTTCAACTTCAACATCGGCAGAAGAAAGTGAAGGTTCCAGAGTCGTTGAAGCTTCAGAGAAATATGAAGATGAAGAAGAAGAAGCAAAACGACGTCGTTGAGGTTGAAATTAGGTCAAAGAAGAAAAAGAAGAAGAGTAAGAAAAACGATGCTGTTGATGTGCAATTGGATTTGATAAGAATGGTGTTACAGAGAGAGGTTGAGAAGAAGAAGAATCCGAATAAGAAGAATGTGCAGAATGTTGATGAAGAATTGGAATTGGTGAAAGTGAATTATAGTGAAGGTGAATTGAGGAAAGAATTGCCCAATGGGGTTATGGAAATTGCTCCTGTTTCGACTTCACGTCGTGATGATGATGATGATGTTGTTGATTTTCACTGTAATGGTAAAGCTGTTGTTACACCACCTTACTTCAGGTCCAAGAATGTTGATAGAAGGGTCCCTTATGATAATTTTCAAGTTTTGAAGAAGTGTAGGAGGAAGAAGTGTCATTGGTGTCAGAGTAGTGATTCTTTGAATTTGATCAAGTGTAACAACTGCCAGAAAGAGTTTTTCTGCATGGATTGCATTAAACAACGGTATTTCGACACTCAAAATGAGGTTAAGAAGGCGTGTCCAGTTTGTCGAGGAACTTGTTCATGTAAAGATTGCCGAGCAAGTCAGTGTAAAGACCGTGAAAGTAAGGATTGTTTGGCTGGTACAAGCAGAGTTGATAGGATATTGCATTTTCATTATTTGGTCTGTATGCTCCTTCCGGTAATAAAACAAATAAGCGAAGACCAGCATGCAGAGCTAGAAACAGAAGCGAAAAATAAAGGGGAAAGTATTTCTGATATTCTCATCAAGCAAATCGAATTTGACTGCAATGAGAAAATTGACTGCAACTACTGCAAAACACCTATTCTGAATCTTCACAGAAGCTGCCTTAACTGTTCCTACAGTCTATGCTTAAGATGTTGTCAGACATTAAGTCAAGGAAGCCCCTTTGAGCATATAAATTCTCCATTGACTGAGTTACCTGACAAAATGGACACTTGCATTGCTGATGAAAGTTGCCTTTTAGAAGACAAGAGCATTTCTAGCGACAATGAAACTGATACGTCAATGTTGCTGGATTCGACTGGTTTTAACGGTACAACTGACAGTATATCATGCCCTCCTTCAGAGCTAGGTGGTTGTGGTAATGACAACCTTGATTTGAGATGTGTTTTTCCGATAAGCTGGATCGAAGAAATGGAAGCTAAGGCAGAAGAGATAGTTTGCAGCTATGAAGTTCCTGAAATTTTGGATAAAAACTCAAGTTGCTCACTTTGTATTGACAAAGATCATAAAACTAAGAGACATAAGCAATTTGAAGATGCTGCTCGAAGAGAAGATTCTAATGATAATTGCTTATTTTATCCTACAGTTTTCGACATCAATTGCGATCATTTTGAACACTTTCAAAAACACTGGGGGAAAGGCCATCCTGTAGTAGTCCGAGACGTGCTCCGAAGTACGAAAAAACTAAGTTGGGATCCTCTGGTCTTGTTCTGTGCTTATCTTGAAAGGAGCATTGCAAGATATGAGAATAATAAAGACTTACTTGAAGCTTGTTTGGATTGGTGGGAGGTTGAAATTAACATTAGACAGCATTTTACTGGCTCTCTTAAATATCAACCTCGGAAAAATGATTGGCATGAGACGCTGAAACTAAATGGATGGTTATCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTAATTGGTGCTCTTCCACTTCAAGAATACATGAATCCGAGGTTCGGTCTTCTGAATTTAGCTGCAAATATGACAGAGGGGAGAGCAGCAATACATGATAAAGGCCCATATGTATACATTTCTTATGGCTGTGCTGACAACAAAGCTTATTCTGTGCTAAATCTCTCTTATGACTCGTATGATGTGGTTAATATTATGGTTTATACCACAGATGTTCCTGTCTCTACAGAACATCTTACTAAAATAACTAAGTTATTGAAGAAGCACAGAACTCTGTGTCAAAGGGGGTCACCGACTGAAAATGCAGAAGACGCGGAACAAAAGGAACCAGAGAGTATTGTAAGCGAAGGAACCGACTTTTACAGGAGAGTCAATAGAACATCTTACATCTCTACTGAAGTGAAAGCAATAGCTAGTCAAAGTTTAGAGAACAATACTTCCAGCAATGGAGAATGTGGTTCTGGTTCTGATGCTGAAAAAACAGAAAGCTCTTTACCTTTCCACAAGACAGATCAAAGCACTGAAATGTATTCTGTTGCTCAGTGGGATGTCTTCCGGAGACAGGATGTACCGAAGCTTTTAGAATACCTCAAAAGACACAGGGATGAATTTTCTTTTACCAACGAGTATGACAGCAATAAGATAGTTCACCCAATTCTAGATCAGAGCATCTTTCTGGACAATACTCACAAAATGAGACTGAAGGAGGAGTTTGAAATCGAACCATGGACGTTTGAGCAACATGTTGGAGAAGCTATCATCATTCCTGCTGGATGTCCATACCAGATTAGGAATTCTAAGTATTGTGTTCAAGTGGTATTGGAATTTATGTCTTCCGAGAGTGTTGCTGAGTGTATCCAATTGACCGATGAGATCCATCTGCTTCCAGAGAACCACAAAGCAAAAGTAGACAAGATTGAGGTGAAGAAAATGGCTCTTCATAGCATGGATATGGCGATAAAAGAAATACGCGAGCTCACTTCCAATCCAAAACATGATTGA

Protein sequence

>Msa0829620

MVKKSTKEECPPDHLRCSRTDGRQWRCKRRAMENVKLCEVHHLQLQHRQKKVKVPESLKLQRNMKMKKKKQNDVVEVEIRSKKKKKKSKKNDAVDVQLDLIRMVLQREVEKKKNPNKKNVQNVDEELELVKVNYSEGELRKELPNGVMEIAPVSTSRRDDDDDVVDFHCNGKAVVTPPYFRSKNVDRRVPYDNFQVLKKCRRKKCHWCQSSDSLNLIKCNNCQKEFFCMDCIKQRYFDTQNEVKKACPVCRGTCSCKDCRASQCKDRESKDCLAGTSRVDRILHFHYLVCMLLPVIKQISEDQHAELETEAKNKGESISDILIKQIEFDCNEKIDCNYCKTPILNLHRSCLNCSYSLCLRCCQTLSQGSPFEHINSPLTELPDKMDTCIADESCLLEDKSISSDNETDTSMLLDSTGFNGTTDSISCPPSELGGCGNDNLDLRCVFPISWIEEMEAKAEEIVCSYEVPEILDKNSSCSLCIDKDHKTKRHKQFEDAARREDSNDNCLFYPTVFDINCDHFEHFQKHWGKGHPVVVRDVLRSTKKLSWDPLVLFCAYLERSIARYENNKDLLEACLDWWEVEINIRQHFTGSLKYQPRKNDWHETLKLNGWLSSQLFKEQFPAHFAEVIGALPLQEYMNPRFGLLNLAANMTEGRAAIHDKGPYVYISYGCADNKAYSVLNLSYDSYDVVNIMVYTTDVPVSTEHLTKITKLLKKHRTLCQRGSPTENAEDAEQKEPESIVSEGTDFYRRVNRTSYISTEVKAIASQSLENNTSSNGECGSGSDAEKTESSLPFHKTDQSTEMYSVAQWDVFRRQDVPKLLEYLKRHRDEFSFTNEYDSNKIVHPILDQSIFLDNTHKMRLKEEFEIEPWTFEQHVGEAIIIPAGCPYQIRNSKYCVQVVLEFMSSESVAECIQLTDEIHLLPENHKAKVDKIEVKKMALHSMDMAIKEIRELTSNPKHD*