AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0612080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612080 MtrunA17_Chr4g0045641 98.127 534 10 0 1 534 1 534 0.0 1068
Msa0612080 MtrunA17_Chr6g0462191 36.127 346 176 14 140 474 101 412 5.03e-39 147
Msa0612080 MtrunA17_Chr7g0263731 33.989 356 184 11 146 474 108 439 9.76e-37 142
Msa0612080 MtrunA17_Chr1g0181581 31.356 354 189 10 144 474 114 436 2.70e-34 135
Msa0612080 MtrunA17_Chr4g0020671 25.933 536 269 19 3 522 4 427 9.33e-33 130
Msa0612080 MtrunA17_Chr8g0346021 27.947 526 284 17 1 472 1 485 2.55e-32 130
Msa0612080 MtrunA17_Chr1g0200161 37.297 185 107 4 144 327 139 315 1.12e-31 127
Msa0612080 MtrunA17_Chr7g0273861 28.235 340 181 10 142 476 121 402 3.98e-28 116
Msa0612080 MtrunA17_Chr4g0025441 33.724 341 170 17 148 479 98 391 2.01e-24 105
Msa0612080 MtrunA17_Chr2g0316401 31.351 185 107 5 137 316 65 234 4.41e-20 91.3
Msa0612080 MtrunA17_Chr3g0135851 27.869 366 199 12 111 445 55 386 5.53e-20 92.8
Msa0612080 MtrunA17_Chr2g0283321 32.402 179 106 7 147 324 64 228 1.17e-18 86.7
Msa0612080 MtrunA17_Chr1g0146931 30.938 320 156 10 148 442 124 403 8.11e-18 86.3
Msa0612080 MtrunA17_Chr6g0472551 43.038 79 45 0 142 220 113 191 1.18e-16 82.4
Msa0612080 MtrunA17_Chr3g0126901 27.215 316 164 8 148 454 114 372 5.20e-15 77.4
Msa0612080 MtrunA17_Chr1g0203711 44.776 67 37 0 145 211 114 180 1.35e-14 76.3
Msa0612080 MtrunA17_Chr4g0060381 49.206 63 32 0 148 210 102 164 8.08e-14 74.3
Msa0612080 MtrunA17_Chr8g0389781 41.667 84 43 1 144 221 124 207 8.12e-14 73.6
Msa0612080 MtrunA17_Chr7g0273951 46.970 66 35 0 148 213 108 173 3.78e-13 71.2
Msa0612080 MtrunA17_Chr1g0204901 42.647 68 39 0 145 212 135 202 5.76e-13 71.2
Msa0612080 MtrunA17_Chr1g0172611 30.496 141 87 3 147 282 106 240 8.08e-13 70.1
Msa0612080 MtrunA17_Chr8g0340761 47.541 61 32 0 148 208 128 188 2.01e-12 69.3
Msa0612080 MtrunA17_Chr2g0330921 50.000 62 31 0 147 208 98 159 2.53e-12 68.6
Msa0612080 MtrunA17_Chr4g0057321 50.820 61 30 0 148 208 90 150 5.28e-12 67.8
Msa0612080 MtrunA17_Chr8g0371131 48.387 62 32 0 148 209 73 134 6.23e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0612080 AT3G59690.2 51.232 568 190 18 1 533 1 516 3.07e-160 466
Msa0612080 AT3G59690.1 51.232 568 190 18 1 533 1 516 3.07e-160 466
Msa0612080 AT2G43680.4 52.550 451 140 16 92 534 284 668 9.92e-124 378
Msa0612080 AT2G43680.4 58.696 138 41 5 1 126 1 134 2.09e-25 110
Msa0612080 AT2G43680.2 52.550 451 140 16 92 534 284 668 9.92e-124 378
Msa0612080 AT2G43680.2 58.696 138 41 5 1 126 1 134 2.09e-25 110
Msa0612080 AT2G43680.3 52.550 451 140 16 92 534 284 668 9.92e-124 378
Msa0612080 AT2G43680.3 58.696 138 41 5 1 126 1 134 2.09e-25 110
Msa0612080 AT2G43680.5 52.550 451 140 16 92 534 284 668 9.92e-124 378
Msa0612080 AT2G43680.5 58.696 138 41 5 1 126 1 134 2.09e-25 110
Msa0612080 AT2G43680.1 52.550 451 140 16 92 534 285 669 1.31e-123 377
Msa0612080 AT2G43680.1 55.396 139 45 5 1 126 1 135 1.75e-25 111
Msa0612080 AT5G03040.1 29.608 510 252 18 1 477 1 436 6.23e-40 151
Msa0612080 AT5G03040.3 29.608 510 252 18 1 477 1 436 6.23e-40 151
Msa0612080 AT5G03040.2 29.608 510 252 18 1 477 1 436 6.23e-40 151
Msa0612080 AT3G52290.1 33.550 307 170 10 145 444 107 386 1.15e-38 147
Msa0612080 AT1G01110.2 28.283 495 261 20 1 449 1 447 3.13e-31 127
Msa0612080 AT5G13460.1 29.819 332 163 10 118 449 90 351 1.46e-28 118
Msa0612080 AT3G49260.1 29.139 302 175 6 148 441 122 392 2.51e-26 112
Msa0612080 AT3G49260.4 29.139 302 175 6 148 441 122 392 2.51e-26 112
Msa0612080 AT3G49260.2 29.139 302 175 6 148 441 122 392 2.51e-26 112
Msa0612080 AT3G49260.3 28.146 302 179 5 148 441 122 393 3.25e-26 112
Msa0612080 AT4G00820.1 31.319 364 194 15 145 473 131 473 9.95e-26 111
Msa0612080 AT2G26410.2 36.464 181 90 6 145 316 147 311 1.28e-25 110
Msa0612080 AT2G26410.1 36.464 181 90 6 145 316 147 311 1.28e-25 110
Msa0612080 AT3G09710.1 37.427 171 96 4 145 314 107 267 3.97e-24 105
Msa0612080 AT2G26180.1 31.132 212 110 6 148 341 86 279 2.50e-23 102
Msa0612080 AT3G09710.2 35.955 178 103 4 145 314 107 281 4.38e-23 102
Msa0612080 AT3G22190.3 38.172 186 90 6 148 325 90 258 7.24e-23 101
Msa0612080 AT3G22190.2 38.172 186 90 6 148 325 90 258 7.24e-23 101
Msa0612080 AT3G22190.4 38.172 186 90 6 148 325 90 258 7.24e-23 101
Msa0612080 AT3G22190.1 38.172 186 90 6 148 325 90 258 7.24e-23 101
Msa0612080 AT2G33990.1 32.127 221 121 9 148 363 49 245 2.57e-21 94.4
Msa0612080 AT1G72670.1 29.469 207 95 6 142 326 89 266 1.48e-18 88.6
Msa0612080 AT4G10640.1 33.939 165 82 4 140 283 94 252 1.64e-18 88.6
Msa0612080 AT1G17480.1 36.296 135 67 2 148 282 96 211 3.12e-18 87.0
Msa0612080 AT3G15050.1 32.308 195 112 7 131 316 27 210 4.09e-17 81.6
Msa0612080 AT5G03960.1 33.577 137 86 1 146 282 107 238 1.11e-14 76.6
Msa0612080 AT5G03960.3 33.577 137 86 1 146 282 108 239 1.12e-14 76.6
Msa0612080 AT5G03960.2 33.577 137 86 1 146 282 108 239 1.12e-14 76.6
Msa0612080 AT4G14750.1 47.059 68 36 0 145 212 104 171 1.60e-14 75.9
Msa0612080 AT4G14750.3 47.059 68 36 0 145 212 163 230 2.55e-14 75.9
Msa0612080 AT4G14750.2 49.231 65 33 0 148 212 166 230 2.83e-14 75.5
Msa0612080 AT3G16490.1 50.000 62 31 0 148 209 109 170 5.82e-14 74.3
Msa0612080 AT5G62070.1 51.786 56 27 0 145 200 116 171 2.44e-13 72.4
Msa0612080 AT5G07240.1 46.774 62 33 0 145 206 105 166 3.58e-13 72.0
Msa0612080 AT5G07240.2 46.774 62 33 0 145 206 151 212 4.27e-13 72.0
Msa0612080 AT1G18840.1 43.077 65 37 0 145 209 108 172 6.19e-13 71.6
Msa0612080 AT1G18840.3 43.077 65 37 0 145 209 108 172 6.19e-13 71.6
Msa0612080 AT1G18840.2 43.077 65 37 0 145 209 108 172 6.19e-13 71.6
Msa0612080 AT3G49380.1 37.634 93 55 1 145 234 109 201 7.98e-13 70.5
Msa0612080 AT4G29150.1 45.312 64 35 0 145 208 130 193 1.35e-12 70.1
Msa0612080 AT1G74690.1 27.059 170 87 4 145 309 112 249 4.78e-12 68.9
Msa0612080 AT1G51960.1 42.857 77 39 1 148 224 102 173 5.15e-12 67.8
Msa0612080 AT3G51380.1 41.429 70 41 0 140 209 31 100 9.82e-12 62.0
Msa0612080 AT1G01110.1 25.424 295 171 12 191 449 3 284 2.21e-11 65.9

Find 179 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAGCATTGAGAAAATATT+TGG 0.147656 4_2:+60458130 Msa0612080:CDS
ATAGTCGATCTTGTTGATTT+TGG 0.221689 4_2:-60459683 None:intergenic
AATCACACAAATCTTGTAAA+AGG 0.233035 4_2:-60460181 None:intergenic
GGCTTTCTTTCAACCCTTGC+AGG 0.240511 4_2:-60460160 None:intergenic
ACAGGCGTTTGAGTTGATTT+TGG 0.283729 4_2:-60459458 None:intergenic
TTTCCTTGTGGAGTTCTAAA+TGG 0.286373 4_2:-60459737 None:intergenic
TCAAGTGACTGGTATTTATC+TGG 0.291478 4_2:-60460097 None:intergenic
GTCAATGTTCTCTAGAAATA+AGG 0.300536 4_2:+60460051 Msa0612080:CDS
TAATTATAAACTCCATAAAA+AGG 0.305338 4_2:+60455991 Msa0612080:five_prime_UTR
TTTCCTTTGTCACAAGGAAT+AGG 0.310912 4_2:+60460007 Msa0612080:CDS
CACACCACCAAGACCTTATT+CGG 0.317722 4_2:+60459586 Msa0612080:CDS
GGGTCATTCAAATGGAATAA+AGG 0.327034 4_2:+60460028 Msa0612080:CDS
GTGTGAATTGGAAATTCTTC+AGG 0.333924 4_2:-60459568 None:intergenic
CTCTTGGAATCAGTGCTTGT+TGG 0.334476 4_2:-60459974 None:intergenic
TTCAACTAACTTTACTTCAA+TGG 0.337534 4_2:-60455846 None:intergenic
TGAGAGCTTGAGCCAGGTCT+TGG 0.341364 4_2:-60459623 None:intergenic
CTCTAAGAATCCAATTCCTT+TGG 0.348787 4_2:-60456046 None:intergenic
TACCAGTCACTTGAATCTAT+TGG 0.350119 4_2:+60460106 Msa0612080:CDS
ACAGTTGGAGCCATGTAGTT+TGG 0.351130 4_2:-60459875 None:intergenic
GGCTGCTTACAGAGGTTATA+TGG 0.351906 4_2:+60458426 Msa0612080:CDS
CTCCTTGCCGTCGATCGTTC+TGG 0.357847 4_2:+60456907 Msa0612080:five_prime_UTR
TTCCTTTGTCACAAGGAATA+GGG 0.362580 4_2:+60460008 Msa0612080:CDS
CAGAGCTCTAAAACTCTTCC+TGG 0.366223 4_2:-60458743 None:intergenic
ACCTTTCGACGTACCATTGA+AGG 0.378126 4_2:+60459814 Msa0612080:CDS
TTCCGCGAAGATGCCGCTTT+CGG 0.379549 4_2:-60458325 None:intergenic
GCAGCATTGAGAAAATATTT+GGG 0.385983 4_2:+60458131 Msa0612080:CDS
TGGTTCTGTAAAGTTGGTTC+TGG 0.389882 4_2:-60458379 None:intergenic
TAACAGCTGCATGTGTTTCA+TGG 0.394012 4_2:-60458830 None:intergenic
GGTCATTCAAATGGAATAAA+GGG 0.400507 4_2:+60460029 Msa0612080:CDS
TTTAGGAGTTATTGTAACTT+TGG 0.403066 4_2:+60456213 Msa0612080:five_prime_UTR
CTAAATGGAGGAGTTCTAGA+TGG 0.403634 4_2:-60459722 None:intergenic
GGCCTTTGAGAGCTTGAGCC+AGG 0.404316 4_2:-60459629 None:intergenic
AAAGGTTTGGTAAGGCTTCA+AGG 0.407441 4_2:+60458766 Msa0612080:CDS
AAGGTCTTGGTGGTGTGAAT+TGG 0.407818 4_2:-60459580 None:intergenic
AATGAAGCTGGAAGTACCTT+GGG 0.409619 4_2:+60458931 Msa0612080:CDS
AAGTAACAAACCAAAGGAAT+TGG 0.409738 4_2:+60456036 Msa0612080:five_prime_UTR
TCAACTAACTTTACTTCAAT+GGG 0.411536 4_2:-60455845 None:intergenic
AACAACAAGTACTTGCAATT+AGG 0.413110 4_2:+60458167 Msa0612080:CDS
TGCTACTGAGATGGGAAAGA+AGG 0.416486 4_2:+60457167 Msa0612080:exon
TGGTACGTCGAAAGGTGAAT+TGG 0.417209 4_2:-60459807 None:intergenic
CCACCGCCAAATCTTTCTCT+TGG 0.423496 4_2:-60459932 None:intergenic
ACCTTGGGGAAAAGTGCTTT+AGG 0.429209 4_2:+60458946 Msa0612080:CDS
TTAAACTTACAGGAAGAAAC+AGG 0.431182 4_2:+60457142 Msa0612080:intron
TTATAGCATAGCAACACATT+AGG 0.434484 4_2:-60460409 None:intergenic
AGAGAAAGAGAAAATAAAGA+AGG 0.437285 4_2:-60455902 None:intergenic
AGGCAGGTAACAATGAAGAT+TGG 0.438407 4_2:+60459141 Msa0612080:CDS
AGTAATCCAAGAGAAAGATT+TGG 0.440973 4_2:+60459926 Msa0612080:CDS
TTTGGTCGCTCGGGAGGTGT+GGG 0.442251 4_2:-60458193 None:intergenic
AAGGAATAGGGTCATTCAAA+TGG 0.447925 4_2:+60460020 Msa0612080:CDS
GCCCTTGGAGATGGATCCCT+TGG 0.448654 4_2:-60458280 None:intergenic
ACTCGGCTTGATATCGTGCC+TGG 0.450049 4_2:-60458903 None:intergenic
TATGATTGAGAGTGTATTAG+TGG 0.456025 4_2:+60460281 Msa0612080:three_prime_UTR
GGCATTTGCATATTCACATC+AGG 0.465718 4_2:+60459247 Msa0612080:CDS
AGGAAATGAGACTCTCCTCT+TGG 0.466551 4_2:-60459990 None:intergenic
GGCAGGTAACAATGAAGATT+GGG 0.469502 4_2:+60459142 Msa0612080:CDS
GGCTTAGGAGAAGGAGGCCT+AGG 0.481446 4_2:-60458250 None:intergenic
TCCAGCTTCATTCTTGTACT+CGG 0.482184 4_2:-60458920 None:intergenic
GATTCCCATGGTGGTGGAAC+TGG 0.486021 4_2:+60459501 Msa0612080:CDS
AAACAGGAATGCTACTGAGA+TGG 0.487048 4_2:+60457158 Msa0612080:exon
TCCTTCAATGGTACGTCGAA+AGG 0.487272 4_2:-60459815 None:intergenic
GAGCTCTGAAAGGTTTGGTA+AGG 0.487495 4_2:+60458758 Msa0612080:CDS
GCGTGACGTCAAAATATTCA+AGG 0.487546 4_2:+60459768 Msa0612080:CDS
CTCCGAAAGCGGCATCTTCG+CGG 0.487625 4_2:+60458323 Msa0612080:CDS
GGAGAAGCGGCCCTTGGAGA+TGG 0.488016 4_2:-60458289 None:intergenic
AGATGGGAAAGAAGGGGAGT+TGG 0.488180 4_2:+60457175 Msa0612080:exon
TGCTGCTTGGTTCTCTGAAG+AGG 0.488717 4_2:-60458114 None:intergenic
TCTTTCAACCCTTGCAGGCA+AGG 0.489990 4_2:-60460155 None:intergenic
GAAGTATTATGTGGTACTGC+TGG 0.491815 4_2:+60456080 Msa0612080:five_prime_UTR
TCCCTTGGAGAAGGAGGCTT+AGG 0.492264 4_2:-60458265 None:intergenic
TGTCTCGGCGACTAAGATCC+AGG 0.493274 4_2:+60458405 Msa0612080:CDS
AGAGAAAATAAAGAAGGGTA+TGG 0.495233 4_2:-60455896 None:intergenic
CTCCTAAGCCTCCTTCTCCA+AGG 0.498883 4_2:+60458263 Msa0612080:CDS
TTGAACATTGAGTGAGAAAG+TGG 0.499614 4_2:+60455864 Msa0612080:five_prime_UTR
GCCGAGTACAAGAATGAAGC+TGG 0.501793 4_2:+60458919 Msa0612080:CDS
CTCCTAGAGTTGCTTCTCCT+AGG 0.502361 4_2:+60458233 Msa0612080:CDS
AACAGGAATGCTACTGAGAT+GGG 0.502497 4_2:+60457159 Msa0612080:exon
ACATGCTGGTTCTGTAAAGT+TGG 0.510843 4_2:-60458385 None:intergenic
ACTCGCGGAGAAGCGGCCCT+TGG 0.513311 4_2:-60458295 None:intergenic
GAATGAAGCTGGAAGTACCT+TGG 0.515373 4_2:+60458930 Msa0612080:CDS
GAGAAAGAGAAAATAAAGAA+GGG 0.516242 4_2:-60455901 None:intergenic
AGGCTTCAAGGAGTGGTAAG+AGG 0.518282 4_2:+60458778 Msa0612080:CDS
GGTCGCTCGGGAGGTGTGGG+AGG 0.522529 4_2:-60458190 None:intergenic
AGACTGTCATCGTCCTTCAA+TGG 0.522835 4_2:-60459827 None:intergenic
AAAGAAGGGTATGGTATGGT+TGG 0.523898 4_2:-60455887 None:intergenic
TATTCAAGGCCAAGGGGAGT+AGG 0.527231 4_2:+60459782 Msa0612080:CDS
AGCACAAAAGAGAAGAAGAA+AGG 0.528405 4_2:+60458049 Msa0612080:CDS
CCAACCAGTTCCACCACCAT+GGG 0.530319 4_2:-60459505 None:intergenic
GAATTGGATCCTACTCCCCT+TGG 0.530551 4_2:-60459791 None:intergenic
CTCGATCGCGTATCTGTCAC+AGG 0.530625 4_2:-60459476 None:intergenic
GACCCTATTCCTTGTGACAA+AGG 0.531331 4_2:-60460010 None:intergenic
TGTTCCGAATAAGGTCTTGG+TGG 0.535259 4_2:-60459590 None:intergenic
CGTCAAAATATTCAAGGCCA+AGG 0.538050 4_2:+60459774 Msa0612080:CDS
GCTACTGAGATGGGAAAGAA+GGG 0.538126 4_2:+60457168 Msa0612080:exon
TTCCAATAGATTCAAGTGAC+TGG 0.538161 4_2:-60460108 None:intergenic
AGAAAGAGAGAAGTATTATG+TGG 0.540070 4_2:+60456071 Msa0612080:five_prime_UTR
TCCTAAGCCTCCTTCTCCAA+GGG 0.542552 4_2:+60458264 Msa0612080:CDS
AGCAGTATCCTTGCCTGCAA+GGG 0.545645 4_2:+60460147 Msa0612080:CDS
ACTTCAATGGGAAGACTATG+TGG 0.546156 4_2:-60455833 None:intergenic
ATTACTACTAGCGCGTACTT+TGG 0.546568 4_2:-60459909 None:intergenic
GCTGCTTGGTTCTCTGAAGA+GGG 0.546752 4_2:-60458113 None:intergenic
GTCTCATTTCCTTTGTCACA+AGG 0.546913 4_2:+60460001 Msa0612080:CDS
AGAAGCGAGGTTGCAGAGGA+AGG 0.547317 4_2:+60459193 Msa0612080:CDS
TCCATGTTATCAAAGGCAAA+AGG 0.548096 4_2:-60459650 None:intergenic
CGAGCGGATTCCCATGGTGG+TGG 0.550081 4_2:+60459495 Msa0612080:CDS
TCTTAGTCGCCGAGACATGC+TGG 0.550419 4_2:-60458399 None:intergenic
TTGGCCTTGGCAGAAACAGT+TGG 0.550995 4_2:-60459890 None:intergenic
TGATAGCTTACTGACAAAAG+AGG 0.552866 4_2:+60459166 Msa0612080:CDS
ACGCTTGAAGTGTTTCCTTG+TGG 0.554504 4_2:-60459749 None:intergenic
AAGTAGAAGCGAGGTTGCAG+AGG 0.554875 4_2:+60459189 Msa0612080:CDS
CAGCAGTATCCTTGCCTGCA+AGG 0.555494 4_2:+60460146 Msa0612080:CDS
TACACACCACTCTAAGGGGA+AGG 0.556316 4_2:+60457221 Msa0612080:CDS
GATGGATCCCTTGGAGAAGG+AGG 0.557622 4_2:-60458271 None:intergenic
AATCCAGATGTTAGAAAACC+AGG 0.559159 4_2:+60458885 Msa0612080:CDS
ACTAGCGCGTACTTTGGCCT+TGG 0.561095 4_2:-60459903 None:intergenic
AGGATTCTCATGGCTCTCAC+AGG 0.561873 4_2:+60460071 Msa0612080:CDS
CTAGGAGAAGCAACTCTAGG+AGG 0.564157 4_2:-60458232 None:intergenic
TATAACCTCTGTAAGCAGCC+TGG 0.564353 4_2:-60458423 None:intergenic
AAAGAGAAGAAGAAAGGTGT+AGG 0.565399 4_2:+60458055 Msa0612080:CDS
GGCTCCAACTGTTTCTGCCA+AGG 0.565988 4_2:+60459886 Msa0612080:CDS
CATCAAAAGAGAGAGATCAA+TGG 0.567226 4_2:+60459226 Msa0612080:CDS
CCTTGTGGAGTTCTAAATGG+AGG 0.567299 4_2:-60459734 None:intergenic
TGGTACTGCTGGAAAGAAGA+AGG 0.567381 4_2:+60456091 Msa0612080:five_prime_UTR
AGATTTGGCGGTGGTAGTAG+TGG 0.568746 4_2:+60459941 Msa0612080:CDS
ATGTAGTTTGGAACGGAGAA+CGG 0.569098 4_2:-60459863 None:intergenic
GGGAAAAGTGCTTTAGGACA+TGG 0.569234 4_2:+60458952 Msa0612080:CDS
GTCAAAATATTCAAGGCCAA+GGG 0.570622 4_2:+60459775 Msa0612080:CDS
TTTGGTAAGGCTTCAAGGAG+TGG 0.571343 4_2:+60458771 Msa0612080:CDS
AATCCAAGAGAAAGATTTGG+CGG 0.577080 4_2:+60459929 Msa0612080:CDS
GGAGATGGATCCCTTGGAGA+AGG 0.577659 4_2:-60458274 None:intergenic
TGCTTGGTTCTCTGAAGAGG+GGG 0.580393 4_2:-60458111 None:intergenic
CTCCAAGGGATCCATCTCCA+AGG 0.580760 4_2:+60458278 Msa0612080:CDS
GGTGTAGGAAAACTAAAGCA+TGG 0.583060 4_2:+60458070 Msa0612080:CDS
AAATAAAGAAGGGTATGGTA+TGG 0.583286 4_2:-60455891 None:intergenic
AGAGGTAACTCGCGGAGAAG+CGG 0.585392 4_2:-60458302 None:intergenic
TCCAACCAGTTCCACCACCA+TGG 0.585925 4_2:-60459506 None:intergenic
TGGTGTATCCATGTTATCAA+AGG 0.590388 4_2:-60459657 None:intergenic
GGAGAAGGAGGCTTAGGAGA+AGG 0.593364 4_2:-60458259 None:intergenic
TGGAGCCATGTAGTTTGGAA+CGG 0.593443 4_2:-60459870 None:intergenic
GGCCTAGGAGAAGCAACTCT+AGG 0.595533 4_2:-60458235 None:intergenic
GACCTGGCTCAAGCTCTCAA+AGG 0.598818 4_2:+60459627 Msa0612080:CDS
TCCAAGGGATCCATCTCCAA+GGG 0.601031 4_2:+60458279 Msa0612080:CDS
TAGGAGAAGCAACTCTAGGA+GGG 0.605104 4_2:-60458231 None:intergenic
CACCAGAACGATCGACGGCA+AGG 0.605791 4_2:-60456909 None:intergenic
CCTCCATTTAGAACTCCACA+AGG 0.606509 4_2:+60459734 Msa0612080:CDS
GAAGGAGGCTTAGGAGAAGG+AGG 0.609274 4_2:-60458256 None:intergenic
TTTACAGAACCAGCATGTCT+CGG 0.610936 4_2:+60458390 Msa0612080:CDS
TCTAGAAATAAGGATTCTCA+TGG 0.612036 4_2:+60460061 Msa0612080:CDS
GTTCTCCGTTCCAAACTACA+TGG 0.616839 4_2:+60459865 Msa0612080:CDS
CGCGATCGAGCGGATTCCCA+TGG 0.617077 4_2:+60459489 Msa0612080:CDS
AAATTACCTTCCCCTTAGAG+TGG 0.617889 4_2:-60457227 None:intergenic
ATCTATTGGAAATGTGAGTG+TGG 0.620035 4_2:+60460120 Msa0612080:CDS
ACTCTAGGAGGGACGAAAGG+TGG 0.620082 4_2:-60458220 None:intergenic
ACTATGTTAACAGTTATGGA+AGG 0.620863 4_2:+60459430 Msa0612080:intron
AAGCTCACCAGAACGATCGA+CGG 0.622940 4_2:-60456914 None:intergenic
CCAAGAGAAAGATTTGGCGG+TGG 0.631411 4_2:+60459932 Msa0612080:CDS
CAAAAGACAAGTCCAAGACC+TGG 0.632412 4_2:+60459611 Msa0612080:CDS
CAGCATTGAGAAAATATTTG+GGG 0.632868 4_2:+60458132 Msa0612080:CDS
GCGAGTTACCTCTCCGAAAG+CGG 0.633756 4_2:+60458312 Msa0612080:CDS
CAAGAAAAGTAACAAACCAA+AGG 0.635461 4_2:+60456030 Msa0612080:five_prime_UTR
GATCGAGCGGATTCCCATGG+TGG 0.638826 4_2:+60459492 Msa0612080:CDS
CTGCTTGGTTCTCTGAAGAG+GGG 0.639910 4_2:-60458112 None:intergenic
GCAACTCTAGGAGGGACGAA+AGG 0.644669 4_2:-60458223 None:intergenic
AAGCTCTGTGACAACTAACA+AGG 0.646533 4_2:+60456236 Msa0612080:five_prime_UTR
AAGATCCAGGCTGCTTACAG+AGG 0.646831 4_2:+60458418 Msa0612080:CDS
TAAGAGGACAGAATGTGAAG+AGG 0.651089 4_2:+60458794 Msa0612080:CDS
TCAAAATATTCAAGGCCAAG+GGG 0.659140 4_2:+60459776 Msa0612080:CDS
CAACAAGCACTGATTCCAAG+AGG 0.666446 4_2:+60459975 Msa0612080:CDS
GTGACAGATACGCGATCGAG+CGG 0.669089 4_2:+60459479 Msa0612080:CDS
CCCATGGTGGTGGAACTGGT+TGG 0.672536 4_2:+60459505 Msa0612080:CDS
CGAAGATGCCGCTTTCGGAG+AGG 0.682021 4_2:-60458320 None:intergenic
ATGAAGCTGGAAGTACCTTG+GGG 0.697268 4_2:+60458932 Msa0612080:CDS
GCGGAATGTTCATCAACACA+AGG 0.697723 4_2:+60458342 Msa0612080:CDS
CAAAAGAGGAAGTAGAAGCG+AGG 0.699187 4_2:+60459180 Msa0612080:CDS
TAGTTTGGAACGGAGAACGG+TGG 0.711322 4_2:-60459860 None:intergenic
TACTGCTGGAAAGAAGAAGG+AGG 0.712671 4_2:+60456094 Msa0612080:five_prime_UTR
CTACTGAGATGGGAAAGAAG+GGG 0.714772 4_2:+60457169 Msa0612080:exon
CAGAACGATCGACGGCAAGG+AGG 0.716975 4_2:-60456906 None:intergenic
GCTTTCGGAGAGGTAACTCG+CGG 0.724827 4_2:-60458310 None:intergenic
GAATGTTCATCAACACAAGG+AGG 0.727547 4_2:+60458345 Msa0612080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTCTTTTTTACTTA+AGG - chr4_2:60456959-60456978 None:intergenic 10.0%
!!! CTAATTTATTTTTGATAATT+TGG + chr4_2:60459101-60459120 Msa0612080:intron 10.0%
!!! TTTTATTTATGCTTTTATTT+TGG + chr4_2:60459293-60459312 Msa0612080:intron 10.0%
!!! TTTTTTTTATTAGTTTACAA+TGG - chr4_2:60460333-60460352 None:intergenic 10.0%
!!! TAAATTCTTTTTCTTTATGT+AGG + chr4_2:60455807-60455826 Msa0612080:five_prime_UTR 15.0%
!!! ATAGTAGTAATTTAGATTTT+TGG - chr4_2:60455947-60455966 None:intergenic 15.0%
!!! TTAATTTTCTTTGTATTTGT+GGG - chr4_2:60455974-60455993 None:intergenic 15.0%
!!! ATTAATTTTCTTTGTATTTG+TGG - chr4_2:60455975-60455994 None:intergenic 15.0%
!! TAATTATAAACTCCATAAAA+AGG + chr4_2:60455991-60456010 Msa0612080:five_prime_UTR 15.0%
!! TTGGATATAATTGAATTAAA+AGG - chr4_2:60456470-60456489 None:intergenic 15.0%
!! AAAAATGAAAGATGAATTAT+TGG - chr4_2:60456611-60456630 None:intergenic 15.0%
!! ACATATTAAAACAATGAATA+AGG - chr4_2:60457007-60457026 None:intergenic 15.0%
!! GTTTAAATTAAGATATAGTA+AGG - chr4_2:60457128-60457147 None:intergenic 15.0%
!! ATATCTTAATTTAAACTTAC+AGG + chr4_2:60457132-60457151 Msa0612080:intron 15.0%
!!! TTTTATAATTGGTTTTCTTA+TGG + chr4_2:60457333-60457352 Msa0612080:intron 15.0%
!!! AATTTTCTTAATATTACCAA+AGG - chr4_2:60457590-60457609 None:intergenic 15.0%
!!! ATTATTTGAAATATTGCAAA+AGG + chr4_2:60457749-60457768 Msa0612080:intron 15.0%
!! TAAGATAAGTATTAAGTATT+TGG + chr4_2:60458612-60458631 Msa0612080:intron 15.0%
!!! GTTACTTTATATAAAATTGA+TGG - chr4_2:60459008-60459027 None:intergenic 15.0%
!!! AATTAGTCTGATTTATATAA+AGG - chr4_2:60459087-60459106 None:intergenic 15.0%
!!! ATGAATATGCTATTTAAAAT+AGG - chr4_2:60459340-60459359 None:intergenic 15.0%
!! AAACATTAGACAAATAAAAA+TGG - chr4_2:60460225-60460244 None:intergenic 15.0%
!!! TTTTTATTTGTCTAATGTTT+TGG + chr4_2:60460225-60460244 Msa0612080:three_prime_UTR 15.0%
!! AAAAACATAATAGGAAATAA+TGG + chr4_2:60460350-60460369 Msa0612080:three_prime_UTR 15.0%
!!! GAAGATATAGCTTTTAATTA+AGG + chr4_2:60456309-60456328 Msa0612080:intron 20.0%
!! TATTGAATTCCTCATATATT+TGG + chr4_2:60457042-60457061 Msa0612080:intron 20.0%
!! TAAGATATAGTAAGGATTTA+AGG - chr4_2:60457120-60457139 None:intergenic 20.0%
!!! TTTTTTGTCAATAACAGTTT+AGG - chr4_2:60457527-60457546 None:intergenic 20.0%
!!! AAGTATTTGGTTTCTAAATT+TGG + chr4_2:60458625-60458644 Msa0612080:intron 20.0%
!! AAAAAAGCTGGTAAAATTAA+TGG - chr4_2:60458666-60458685 None:intergenic 20.0%
!! AAAGCATAAATAAAAAGTCT+AGG - chr4_2:60459288-60459307 None:intergenic 20.0%
!!! AATATGCTATTTAAAATAGG+TGG - chr4_2:60459337-60459356 None:intergenic 20.0%
! TCAACTAACTTTACTTCAAT+GGG - chr4_2:60455848-60455867 None:intergenic 25.0%
! TTCAACTAACTTTACTTCAA+TGG - chr4_2:60455849-60455868 None:intergenic 25.0%
! GAGAAAGAGAAAATAAAGAA+GGG - chr4_2:60455904-60455923 None:intergenic 25.0%
! AGAGAAAGAGAAAATAAAGA+AGG - chr4_2:60455905-60455924 None:intergenic 25.0%
! TTTAGGAGTTATTGTAACTT+TGG + chr4_2:60456213-60456232 Msa0612080:five_prime_UTR 25.0%
!! AATTATTGGTCTAGAAACAA+AGG - chr4_2:60456597-60456616 None:intergenic 25.0%
!!! TTCATTTTTCAATTCTTCTC+AGG + chr4_2:60456622-60456641 Msa0612080:intron 25.0%
! ATCTTTAATTGATCATGTGA+TGG + chr4_2:60456685-60456704 Msa0612080:intron 25.0%
!!! TTTCTTGTTTTGCATAAAGA+AGG + chr4_2:60456766-60456785 Msa0612080:intron 25.0%
!! TAAAGAAGGTTCTTTTCTTA+AGG + chr4_2:60456780-60456799 Msa0612080:intron 25.0%
!!! AGCATCTCTATTTTATTTTC+AGG - chr4_2:60456885-60456904 None:intergenic 25.0%
! ATTAAGCATTTCACATTTCT+TGG - chr4_2:60457281-60457300 None:intergenic 25.0%
!! GTTGTGGTTCTTTTTATAAT+TGG + chr4_2:60457322-60457341 Msa0612080:intron 25.0%
! GAACCTTGATATGAATTAAA+AGG - chr4_2:60457673-60457692 None:intergenic 25.0%
!! GAAATATTGCAAAAGGTTTT+AGG + chr4_2:60457756-60457775 Msa0612080:intron 25.0%
! AAGTATGATGTAAGAATGAT+GGG - chr4_2:60457800-60457819 None:intergenic 25.0%
!!! TCTTTATTTTACTACGAATC+CGG + chr4_2:60457898-60457917 Msa0612080:intron 25.0%
! AACTGAAACAAGTTCAAATT+CGG - chr4_2:60457967-60457986 None:intergenic 25.0%
!!! AATAGAATTTAGCCTTTTTG+AGG + chr4_2:60458480-60458499 Msa0612080:intron 25.0%
! CTTAATACTTATCTTAGATG+AGG - chr4_2:60458608-60458627 None:intergenic 25.0%
! TAGCATATTCATTAATGATG+TGG + chr4_2:60459348-60459367 Msa0612080:intron 25.0%
! AATCACACAAATCTTGTAAA+AGG - chr4_2:60460184-60460203 None:intergenic 25.0%
!!! TTATTTGTCTAATGTTTTGG+TGG + chr4_2:60460228-60460247 Msa0612080:three_prime_UTR 25.0%
! AAATAAAGAAGGGTATGGTA+TGG - chr4_2:60455894-60455913 None:intergenic 30.0%
AGAGAAAATAAAGAAGGGTA+TGG - chr4_2:60455899-60455918 None:intergenic 30.0%
AAACTCCATAAAAAGGTGAA+AGG + chr4_2:60455998-60456017 Msa0612080:five_prime_UTR 30.0%
CAAGAAAAGTAACAAACCAA+AGG + chr4_2:60456030-60456049 Msa0612080:five_prime_UTR 30.0%
AAGTAACAAACCAAAGGAAT+TGG + chr4_2:60456036-60456055 Msa0612080:five_prime_UTR 30.0%
!! AGAAAGAGAGAAGTATTATG+TGG + chr4_2:60456071-60456090 Msa0612080:five_prime_UTR 30.0%
!!! AGAGAGAGTTTCTTCTTTTT+TGG + chr4_2:60456164-60456183 Msa0612080:five_prime_UTR 30.0%
! GTAACTTTGACAGTACTTTT+AGG + chr4_2:60456196-60456215 Msa0612080:five_prime_UTR 30.0%
TGTTATGAATCATGTTGTGT+TGG + chr4_2:60456366-60456385 Msa0612080:intron 30.0%
! AACAATAACTGACTTTACCT+CGG + chr4_2:60456441-60456460 Msa0612080:intron 30.0%
TGATACATAAATCTTCTGAC+AGG - chr4_2:60456493-60456512 None:intergenic 30.0%
TTATGAACATGTGAAAGAGA+AGG - chr4_2:60456552-60456571 None:intergenic 30.0%
TTGTTTAGACAACCAATCTA+AGG - chr4_2:60456713-60456732 None:intergenic 30.0%
AGGATATACAACAATCAACA+TGG - chr4_2:60456987-60457006 None:intergenic 30.0%
TGAATTCCTCATATATTTGG+AGG + chr4_2:60457045-60457064 Msa0612080:intron 30.0%
TTAAACTTACAGGAAGAAAC+AGG + chr4_2:60457142-60457161 Msa0612080:intron 30.0%
!! TTGGTTTTCAGCAATCAAAA+GGG + chr4_2:60457194-60457213 Msa0612080:CDS 30.0%
CCAAAATGGTTAACCATTTA+CGG + chr4_2:60457365-60457384 Msa0612080:intron 30.0%
ATATGTGTCATATCCGTAAA+TGG - chr4_2:60457381-60457400 None:intergenic 30.0%
TGGAATGTTCATAACTCATA+AGG - chr4_2:60457616-60457635 None:intergenic 30.0%
!! AATCAACCGGAATTTTGATA+CGG - chr4_2:60457648-60457667 None:intergenic 30.0%
!! TGGCCTTTTAATTCATATCA+AGG + chr4_2:60457667-60457686 Msa0612080:intron 30.0%
CAAGTATGATGTAAGAATGA+TGG - chr4_2:60457801-60457820 None:intergenic 30.0%
AAACAAAGTTCAGACAAAAG+AGG - chr4_2:60457852-60457871 None:intergenic 30.0%
!! TTTTGTCTGAACTTTGTTTC+TGG + chr4_2:60457853-60457872 Msa0612080:intron 30.0%
AGAACTTAATGCAACTTCAA+AGG - chr4_2:60457940-60457959 None:intergenic 30.0%
ATCATGCTTATTAACATAGC+AGG + chr4_2:60458012-60458031 Msa0612080:intron 30.0%
! AATATTTTCTCAATGCTGCT+TGG - chr4_2:60458130-60458149 None:intergenic 30.0%
! AGCAGCATTGAGAAAATATT+TGG + chr4_2:60458130-60458149 Msa0612080:CDS 30.0%
! GCAGCATTGAGAAAATATTT+GGG + chr4_2:60458131-60458150 Msa0612080:CDS 30.0%
! CAGCATTGAGAAAATATTTG+GGG + chr4_2:60458132-60458151 Msa0612080:CDS 30.0%
AACAACAAGTACTTGCAATT+AGG + chr4_2:60458167-60458186 Msa0612080:CDS 30.0%
GTTCTCCTTACAAACATATT+CGG + chr4_2:60458504-60458523 Msa0612080:intron 30.0%
TTCTCCTTACAAACATATTC+GGG + chr4_2:60458505-60458524 Msa0612080:intron 30.0%
AATTCCCGAATATGTTTGTA+AGG - chr4_2:60458512-60458531 None:intergenic 30.0%
! GGTAAAATTAATGGATCAAG+CGG - chr4_2:60458657-60458676 None:intergenic 30.0%
TTCATGATCGATAAAAAAGC+TGG - chr4_2:60458678-60458697 None:intergenic 30.0%
AGTATCCTAACTGTAATATG+TGG + chr4_2:60458703-60458722 Msa0612080:intron 30.0%
AAGTACCACATATTACAGTT+AGG - chr4_2:60458711-60458730 None:intergenic 30.0%
ATGTGGTACTTGCAATATAT+AGG + chr4_2:60458720-60458739 Msa0612080:intron 30.0%
! TGGAATTTTTGTAAAGTCTG+AGG + chr4_2:60459121-60459140 Msa0612080:intron 30.0%
GTTGACTATGTTAACAGTTA+TGG + chr4_2:60459426-60459445 Msa0612080:intron 30.0%
ACTATGTTAACAGTTATGGA+AGG + chr4_2:60459430-60459449 Msa0612080:intron 30.0%
!!! ATAGTCGATCTTGTTGATTT+TGG - chr4_2:60459686-60459705 None:intergenic 30.0%
AGTAATCCAAGAGAAAGATT+TGG + chr4_2:60459926-60459945 Msa0612080:CDS 30.0%
GGTCATTCAAATGGAATAAA+GGG + chr4_2:60460029-60460048 Msa0612080:CDS 30.0%
! GTCAATGTTCTCTAGAAATA+AGG + chr4_2:60460051-60460070 Msa0612080:CDS 30.0%
TCTAGAAATAAGGATTCTCA+TGG + chr4_2:60460061-60460080 Msa0612080:CDS 30.0%
! TATGATTGAGAGTGTATTAG+TGG + chr4_2:60460281-60460300 Msa0612080:three_prime_UTR 30.0%
TTGAACATTGAGTGAGAAAG+TGG + chr4_2:60455864-60455883 Msa0612080:five_prime_UTR 35.0%
! AGCAACCTTTCACCTTTTTA+TGG - chr4_2:60456006-60456025 None:intergenic 35.0%
! CTCTAAGAATCCAATTCCTT+TGG - chr4_2:60456049-60456068 None:intergenic 35.0%
! ACAATAACTGACTTTACCTC+GGG + chr4_2:60456442-60456461 Msa0612080:intron 35.0%
ATTGAATTAAAAGGATCCCG+AGG - chr4_2:60456461-60456480 None:intergenic 35.0%
ACATAAATCTTCTGACAGGT+TGG - chr4_2:60456489-60456508 None:intergenic 35.0%
TTCCTCATATATTTGGAGGT+AGG + chr4_2:60457049-60457068 Msa0612080:intron 35.0%
!!! GTTGGTTTTCAGCAATCAAA+AGG + chr4_2:60457193-60457212 Msa0612080:CDS 35.0%
! GTTTTTACACACCACTCTAA+GGG + chr4_2:60457216-60457235 Msa0612080:CDS 35.0%
! TTTTTACACACCACTCTAAG+GGG + chr4_2:60457217-60457236 Msa0612080:CDS 35.0%
TTGGAACAGACATTGTAAGA+AGG - chr4_2:60457262-60457281 None:intergenic 35.0%
TATGGCATTAGATGCCAAAA+TGG + chr4_2:60457351-60457370 Msa0612080:intron 35.0%
! CCGTAAATGGTTAACCATTT+TGG - chr4_2:60457368-60457387 None:intergenic 35.0%
GATTCAAACCATGTTCTTGA+GGG - chr4_2:60457404-60457423 None:intergenic 35.0%
AGATTCAAACCATGTTCTTG+AGG - chr4_2:60457405-60457424 None:intergenic 35.0%
TGTAGCCAATTTGATGAGAA+TGG + chr4_2:60457549-60457568 Msa0612080:intron 35.0%
ACAGTCCATTCTCATCAAAT+TGG - chr4_2:60457557-60457576 None:intergenic 35.0%
!! TTGATGAGAATGGACTGTAA+TGG + chr4_2:60457559-60457578 Msa0612080:intron 35.0%
! TTTTGATACGGTAGAAGCTT+TGG - chr4_2:60457636-60457655 None:intergenic 35.0%
CTTCTACCGTATCAAAATTC+CGG + chr4_2:60457639-60457658 Msa0612080:intron 35.0%
GTATCAAAATTCCGGTTGAT+TGG + chr4_2:60457647-60457666 Msa0612080:intron 35.0%
GAATTAAAAGGCCAATCAAC+CGG - chr4_2:60457661-60457680 None:intergenic 35.0%
CAACTTCAAAGGCAGAATTA+TGG - chr4_2:60457929-60457948 None:intergenic 35.0%
AGCACAAAAGAGAAGAAGAA+AGG + chr4_2:60458049-60458068 Msa0612080:CDS 35.0%
! AAAGAGAAGAAGAAAGGTGT+AGG + chr4_2:60458055-60458074 Msa0612080:CDS 35.0%
!!! AAGAGTTTTAGAGCTCTGAA+AGG + chr4_2:60458748-60458767 Msa0612080:CDS 35.0%
!!! TTTTAGAGCTCTGAAAGGTT+TGG + chr4_2:60458753-60458772 Msa0612080:CDS 35.0%
AATCCAGATGTTAGAAAACC+AGG + chr4_2:60458885-60458904 Msa0612080:CDS 35.0%
!! ATTTTTGTAAAGTCTGAGGC+AGG + chr4_2:60459125-60459144 Msa0612080:intron 35.0%
TGATAGCTTACTGACAAAAG+AGG + chr4_2:60459166-60459185 Msa0612080:CDS 35.0%
CATCAAAAGAGAGAGATCAA+TGG + chr4_2:60459226-60459245 Msa0612080:CDS 35.0%
ATAAAAAGTCTAGGCTGTGT+TGG - chr4_2:60459279-60459298 None:intergenic 35.0%
ATCAAACCCACAAGAAAAAC+AGG + chr4_2:60459544-60459563 Msa0612080:CDS 35.0%
GTGTGAATTGGAAATTCTTC+AGG - chr4_2:60459571-60459590 None:intergenic 35.0%
! TTTTGTTCCGAATAAGGTCT+TGG - chr4_2:60459596-60459615 None:intergenic 35.0%
! CTTGTCTTTTGTTCCGAATA+AGG - chr4_2:60459602-60459621 None:intergenic 35.0%
TCCATGTTATCAAAGGCAAA+AGG - chr4_2:60459653-60459672 None:intergenic 35.0%
TGGTGTATCCATGTTATCAA+AGG - chr4_2:60459660-60459679 None:intergenic 35.0%
!!! GATCTTGTTGATTTTGGAGT+TGG - chr4_2:60459680-60459699 None:intergenic 35.0%
!!! GTTCTAGATGGTTTTGAAGA+TGG - chr4_2:60459713-60459732 None:intergenic 35.0%
!! TTTCCTTGTGGAGTTCTAAA+TGG - chr4_2:60459740-60459759 None:intergenic 35.0%
GTCAAAATATTCAAGGCCAA+GGG + chr4_2:60459775-60459794 Msa0612080:CDS 35.0%
TCAAAATATTCAAGGCCAAG+GGG + chr4_2:60459776-60459795 Msa0612080:CDS 35.0%
AATCCAAGAGAAAGATTTGG+CGG + chr4_2:60459929-60459948 Msa0612080:CDS 35.0%
TTTCCTTTGTCACAAGGAAT+AGG + chr4_2:60460007-60460026 Msa0612080:CDS 35.0%
TTCCTTTGTCACAAGGAATA+GGG + chr4_2:60460008-60460027 Msa0612080:CDS 35.0%
AAGGAATAGGGTCATTCAAA+TGG + chr4_2:60460020-60460039 Msa0612080:CDS 35.0%
GGGTCATTCAAATGGAATAA+AGG + chr4_2:60460028-60460047 Msa0612080:CDS 35.0%
TCAAGTGACTGGTATTTATC+TGG - chr4_2:60460100-60460119 None:intergenic 35.0%
TACCAGTCACTTGAATCTAT+TGG + chr4_2:60460106-60460125 Msa0612080:CDS 35.0%
TTCCAATAGATTCAAGTGAC+TGG - chr4_2:60460111-60460130 None:intergenic 35.0%
ATCTATTGGAAATGTGAGTG+TGG + chr4_2:60460120-60460139 Msa0612080:CDS 35.0%
ACTTCAATGGGAAGACTATG+TGG - chr4_2:60455836-60455855 None:intergenic 40.0%
! AAAGAAGGGTATGGTATGGT+TGG - chr4_2:60455890-60455909 None:intergenic 40.0%
! GAAGTATTATGTGGTACTGC+TGG + chr4_2:60456080-60456099 Msa0612080:five_prime_UTR 40.0%
AAGCTCTGTGACAACTAACA+AGG + chr4_2:60456236-60456255 Msa0612080:five_prime_UTR 40.0%
! TGAATCATGTTGTGTTGGCA+TGG + chr4_2:60456371-60456390 Msa0612080:intron 40.0%
!! CATGTGATGGATCCTTAGAT+TGG + chr4_2:60456698-60456717 Msa0612080:intron 40.0%
CACCTACCTCCAAATATATG+AGG - chr4_2:60457054-60457073 None:intergenic 40.0%
AAACAGGAATGCTACTGAGA+TGG + chr4_2:60457158-60457177 Msa0612080:exon 40.0%
AACAGGAATGCTACTGAGAT+GGG + chr4_2:60457159-60457178 Msa0612080:exon 40.0%
! GGTTTTTACACACCACTCTA+AGG + chr4_2:60457215-60457234 Msa0612080:CDS 40.0%
AAATTACCTTCCCCTTAGAG+TGG - chr4_2:60457230-60457249 None:intergenic 40.0%
TTTGTACGTTGTTCTCGTTG+TGG + chr4_2:60457306-60457325 Msa0612080:intron 40.0%
ACACATATCCCTCAAGAACA+TGG + chr4_2:60457393-60457412 Msa0612080:intron 40.0%
AAAGTCTCAGCTCAGAAAAC+AGG - chr4_2:60457471-60457490 None:intergenic 40.0%
AACGAGACTCTCAATGTGAT+TGG - chr4_2:60457496-60457515 None:intergenic 40.0%
!! GACTGTAATGGATAGACCTT+TGG + chr4_2:60457571-60457590 Msa0612080:intron 40.0%
AGGCAGAATTATGGAAACAC+CGG - chr4_2:60457920-60457939 None:intergenic 40.0%
GGTGTAGGAAAACTAAAGCA+TGG + chr4_2:60458070-60458089 Msa0612080:CDS 40.0%
GAATGTTCATCAACACAAGG+AGG + chr4_2:60458345-60458364 Msa0612080:CDS 40.0%
! TGGTTCTGTAAAGTTGGTTC+TGG - chr4_2:60458382-60458401 None:intergenic 40.0%
!! ACATGCTGGTTCTGTAAAGT+TGG - chr4_2:60458388-60458407 None:intergenic 40.0%
TTTACAGAACCAGCATGTCT+CGG + chr4_2:60458390-60458409 Msa0612080:CDS 40.0%
GTAAGGAGAACACCTCAAAA+AGG - chr4_2:60458495-60458514 None:intergenic 40.0%
GTACTTGCAATATATAGGCC+AGG + chr4_2:60458725-60458744 Msa0612080:intron 40.0%
! AAAGGTTTGGTAAGGCTTCA+AGG + chr4_2:60458766-60458785 Msa0612080:CDS 40.0%
TAAGAGGACAGAATGTGAAG+AGG + chr4_2:60458794-60458813 Msa0612080:CDS 40.0%
TAACAGCTGCATGTGTTTCA+TGG - chr4_2:60458833-60458852 None:intergenic 40.0%
TCCAGCTTCATTCTTGTACT+CGG - chr4_2:60458923-60458942 None:intergenic 40.0%
!! AATGAAGCTGGAAGTACCTT+GGG + chr4_2:60458931-60458950 Msa0612080:CDS 40.0%
AGGCAGGTAACAATGAAGAT+TGG + chr4_2:60459141-60459160 Msa0612080:CDS 40.0%
GGCAGGTAACAATGAAGATT+GGG + chr4_2:60459142-60459161 Msa0612080:CDS 40.0%
GGCATTTGCATATTCACATC+AGG + chr4_2:60459247-60459266 Msa0612080:CDS 40.0%
!!! CGTTTGAGTTGATTTTGGAG+TGG - chr4_2:60459456-60459475 None:intergenic 40.0%
!!! ACAGGCGTTTGAGTTGATTT+TGG - chr4_2:60459461-60459480 None:intergenic 40.0%
! TTTTCTTGTGGGTTTGATGC+AGG - chr4_2:60459542-60459561 None:intergenic 40.0%
!! TCAGGACCTGTTTTTCTTGT+GGG - chr4_2:60459553-60459572 None:intergenic 40.0%
!! TTCAGGACCTGTTTTTCTTG+TGG - chr4_2:60459554-60459573 None:intergenic 40.0%
!! GCCTTTTGCCTTTGATAACA+TGG + chr4_2:60459649-60459668 Msa0612080:CDS 40.0%
!! CTAAATGGAGGAGTTCTAGA+TGG - chr4_2:60459725-60459744 None:intergenic 40.0%
GCGTGACGTCAAAATATTCA+AGG + chr4_2:60459768-60459787 Msa0612080:CDS 40.0%
CGTCAAAATATTCAAGGCCA+AGG + chr4_2:60459774-60459793 Msa0612080:CDS 40.0%
! ATGTAGTTTGGAACGGAGAA+CGG - chr4_2:60459866-60459885 None:intergenic 40.0%
ATTACTACTAGCGCGTACTT+TGG - chr4_2:60459912-60459931 None:intergenic 40.0%
GTCTCATTTCCTTTGTCACA+AGG + chr4_2:60460001-60460020 Msa0612080:CDS 40.0%
TGGTACTGCTGGAAAGAAGA+AGG + chr4_2:60456091-60456110 Msa0612080:five_prime_UTR 45.0%
TACTGCTGGAAAGAAGAAGG+AGG + chr4_2:60456094-60456113 Msa0612080:five_prime_UTR 45.0%
TGCTACTGAGATGGGAAAGA+AGG + chr4_2:60457167-60457186 Msa0612080:exon 45.0%
GCTACTGAGATGGGAAAGAA+GGG + chr4_2:60457168-60457187 Msa0612080:exon 45.0%
CTACTGAGATGGGAAAGAAG+GGG + chr4_2:60457169-60457188 Msa0612080:exon 45.0%
GAAGAGGGGGATGAAAGAAT+TGG - chr4_2:60458101-60458120 None:intergenic 45.0%
! TAGGAGAAGCAACTCTAGGA+GGG - chr4_2:60458234-60458253 None:intergenic 45.0%
GCGGAATGTTCATCAACACA+AGG + chr4_2:60458342-60458361 Msa0612080:CDS 45.0%
TATAACCTCTGTAAGCAGCC+TGG - chr4_2:60458426-60458445 None:intergenic 45.0%
GGCTGCTTACAGAGGTTATA+TGG + chr4_2:60458426-60458445 Msa0612080:CDS 45.0%
!! CAGAGCTCTAAAACTCTTCC+TGG - chr4_2:60458746-60458765 None:intergenic 45.0%
!! GAGCTCTGAAAGGTTTGGTA+AGG + chr4_2:60458758-60458777 Msa0612080:CDS 45.0%
TTTGGTAAGGCTTCAAGGAG+TGG + chr4_2:60458771-60458790 Msa0612080:CDS 45.0%
!! GTGCCTGGTTTTCTAACATC+TGG - chr4_2:60458891-60458910 None:intergenic 45.0%
!! GAATGAAGCTGGAAGTACCT+TGG + chr4_2:60458930-60458949 Msa0612080:CDS 45.0%
!! ATGAAGCTGGAAGTACCTTG+GGG + chr4_2:60458932-60458951 Msa0612080:CDS 45.0%
!! ACCTTGGGGAAAAGTGCTTT+AGG + chr4_2:60458946-60458965 Msa0612080:CDS 45.0%
!! TCCTAAAGCACTTTTCCCCA+AGG - chr4_2:60458950-60458969 None:intergenic 45.0%
!! GGGAAAAGTGCTTTAGGACA+TGG + chr4_2:60458952-60458971 Msa0612080:CDS 45.0%
CAAAAGAGGAAGTAGAAGCG+AGG + chr4_2:60459180-60459199 Msa0612080:CDS 45.0%
! AAAGTCTAGGCTGTGTTGGT+GGG - chr4_2:60459275-60459294 None:intergenic 45.0%
AAAAGTCTAGGCTGTGTTGG+TGG - chr4_2:60459276-60459295 None:intergenic 45.0%
!! AAGGTCTTGGTGGTGTGAAT+TGG - chr4_2:60459583-60459602 None:intergenic 45.0%
CACACCACCAAGACCTTATT+CGG + chr4_2:60459586-60459605 Msa0612080:CDS 45.0%
TGTTCCGAATAAGGTCTTGG+TGG - chr4_2:60459593-60459612 None:intergenic 45.0%
CAAAAGACAAGTCCAAGACC+TGG + chr4_2:60459611-60459630 Msa0612080:CDS 45.0%
!! CCTTGTGGAGTTCTAAATGG+AGG - chr4_2:60459737-60459756 None:intergenic 45.0%
! CCTCCATTTAGAACTCCACA+AGG + chr4_2:60459734-60459753 Msa0612080:CDS 45.0%
! ACGCTTGAAGTGTTTCCTTG+TGG - chr4_2:60459752-60459771 None:intergenic 45.0%
TGGTACGTCGAAAGGTGAAT+TGG - chr4_2:60459810-60459829 None:intergenic 45.0%
ACCTTTCGACGTACCATTGA+AGG + chr4_2:60459814-60459833 Msa0612080:CDS 45.0%
TCCTTCAATGGTACGTCGAA+AGG - chr4_2:60459818-60459837 None:intergenic 45.0%
AGACTGTCATCGTCCTTCAA+TGG - chr4_2:60459830-60459849 None:intergenic 45.0%
GTTCTCCGTTCCAAACTACA+TGG + chr4_2:60459865-60459884 Msa0612080:CDS 45.0%
TGGAGCCATGTAGTTTGGAA+CGG - chr4_2:60459873-60459892 None:intergenic 45.0%
ACAGTTGGAGCCATGTAGTT+TGG - chr4_2:60459878-60459897 None:intergenic 45.0%
CTCTTGGAATCAGTGCTTGT+TGG - chr4_2:60459977-60459996 None:intergenic 45.0%
!! CAACAAGCACTGATTCCAAG+AGG + chr4_2:60459975-60459994 Msa0612080:CDS 45.0%
AGGAAATGAGACTCTCCTCT+TGG - chr4_2:60459993-60460012 None:intergenic 45.0%
GACCCTATTCCTTGTGACAA+AGG - chr4_2:60460013-60460032 None:intergenic 45.0%
!!! TGTTTTTTTAATTATTATTA+TGG + chr4_2:60456340-60456359 Msa0612080:intron 5.0%
!!! TTATTTATTCAATTAATTTT+TGG + chr4_2:60456849-60456868 Msa0612080:intron 5.0%
!!! TATAAAAAATAAAAGTATTT+AGG + chr4_2:60458548-60458567 Msa0612080:intron 5.0%
!! TAATAAAAAAAAAACATAAT+AGG + chr4_2:60460341-60460360 Msa0612080:three_prime_UTR 5.0%
AAGCTCACCAGAACGATCGA+CGG - chr4_2:60456917-60456936 None:intergenic 50.0%
AGATGGGAAAGAAGGGGAGT+TGG + chr4_2:60457175-60457194 Msa0612080:exon 50.0%
! TACACACCACTCTAAGGGGA+AGG + chr4_2:60457221-60457240 Msa0612080:CDS 50.0%
! TGCTTGGTTCTCTGAAGAGG+GGG - chr4_2:60458114-60458133 None:intergenic 50.0%
! CTGCTTGGTTCTCTGAAGAG+GGG - chr4_2:60458115-60458134 None:intergenic 50.0%
! GCTGCTTGGTTCTCTGAAGA+GGG - chr4_2:60458116-60458135 None:intergenic 50.0%
! TGCTGCTTGGTTCTCTGAAG+AGG - chr4_2:60458117-60458136 None:intergenic 50.0%
CTAGGAGAAGCAACTCTAGG+AGG - chr4_2:60458235-60458254 None:intergenic 50.0%
CTCCTAGAGTTGCTTCTCCT+AGG + chr4_2:60458233-60458252 Msa0612080:CDS 50.0%
TCCTAAGCCTCCTTCTCCAA+GGG + chr4_2:60458264-60458283 Msa0612080:CDS 50.0%
TCCAAGGGATCCATCTCCAA+GGG + chr4_2:60458279-60458298 Msa0612080:CDS 50.0%
AAGATCCAGGCTGCTTACAG+AGG + chr4_2:60458418-60458437 Msa0612080:CDS 50.0%
AGGCTTCAAGGAGTGGTAAG+AGG + chr4_2:60458778-60458797 Msa0612080:CDS 50.0%
GCCGAGTACAAGAATGAAGC+TGG + chr4_2:60458919-60458938 Msa0612080:CDS 50.0%
AAGTAGAAGCGAGGTTGCAG+AGG + chr4_2:60459189-60459208 Msa0612080:CDS 50.0%
TATTCAAGGCCAAGGGGAGT+AGG + chr4_2:60459782-60459801 Msa0612080:CDS 50.0%
GAATTGGATCCTACTCCCCT+TGG - chr4_2:60459794-60459813 None:intergenic 50.0%
! TAGTTTGGAACGGAGAACGG+TGG - chr4_2:60459863-60459882 None:intergenic 50.0%
!! TTGGCCTTGGCAGAAACAGT+TGG - chr4_2:60459893-60459912 None:intergenic 50.0%
CCACCGCCAAATCTTTCTCT+TGG - chr4_2:60459935-60459954 None:intergenic 50.0%
CCAAGAGAAAGATTTGGCGG+TGG + chr4_2:60459932-60459951 Msa0612080:CDS 50.0%
AGATTTGGCGGTGGTAGTAG+TGG + chr4_2:60459941-60459960 Msa0612080:CDS 50.0%
AGGATTCTCATGGCTCTCAC+AGG + chr4_2:60460071-60460090 Msa0612080:CDS 50.0%
AGCAGTATCCTTGCCTGCAA+GGG + chr4_2:60460147-60460166 Msa0612080:CDS 50.0%
TCTTTCAACCCTTGCAGGCA+AGG - chr4_2:60460158-60460177 None:intergenic 50.0%
GGCTTTCTTTCAACCCTTGC+AGG - chr4_2:60460163-60460182 None:intergenic 50.0%
!!! AGGTGGCGTTTTTGGTCGCT+CGG - chr4_2:60458206-60458225 None:intergenic 55.0%
! GGGACGAAAGGTGGCGTTTT+TGG - chr4_2:60458214-60458233 None:intergenic 55.0%
! ACTCTAGGAGGGACGAAAGG+TGG - chr4_2:60458223-60458242 None:intergenic 55.0%
! GCAACTCTAGGAGGGACGAA+AGG - chr4_2:60458226-60458245 None:intergenic 55.0%
GGCCTAGGAGAAGCAACTCT+AGG - chr4_2:60458238-60458257 None:intergenic 55.0%
GAAGGAGGCTTAGGAGAAGG+AGG - chr4_2:60458259-60458278 None:intergenic 55.0%
GGAGAAGGAGGCTTAGGAGA+AGG - chr4_2:60458262-60458281 None:intergenic 55.0%
CTCCTAAGCCTCCTTCTCCA+AGG + chr4_2:60458263-60458282 Msa0612080:CDS 55.0%
TCCCTTGGAGAAGGAGGCTT+AGG - chr4_2:60458268-60458287 None:intergenic 55.0%
GATGGATCCCTTGGAGAAGG+AGG - chr4_2:60458274-60458293 None:intergenic 55.0%
GGAGATGGATCCCTTGGAGA+AGG - chr4_2:60458277-60458296 None:intergenic 55.0%
CTCCAAGGGATCCATCTCCA+AGG + chr4_2:60458278-60458297 Msa0612080:CDS 55.0%
AGAGGTAACTCGCGGAGAAG+CGG - chr4_2:60458305-60458324 None:intergenic 55.0%
GCTTTCGGAGAGGTAACTCG+CGG - chr4_2:60458313-60458332 None:intergenic 55.0%
GCGAGTTACCTCTCCGAAAG+CGG + chr4_2:60458312-60458331 Msa0612080:CDS 55.0%
!! TTCCGCGAAGATGCCGCTTT+CGG - chr4_2:60458328-60458347 None:intergenic 55.0%
TCTTAGTCGCCGAGACATGC+TGG - chr4_2:60458402-60458421 None:intergenic 55.0%
TGTCTCGGCGACTAAGATCC+AGG + chr4_2:60458405-60458424 Msa0612080:CDS 55.0%
! ACTCGGCTTGATATCGTGCC+TGG - chr4_2:60458906-60458925 None:intergenic 55.0%
AGAAGCGAGGTTGCAGAGGA+AGG + chr4_2:60459193-60459212 Msa0612080:CDS 55.0%
CTCGATCGCGTATCTGTCAC+AGG - chr4_2:60459479-60459498 None:intergenic 55.0%
GTGACAGATACGCGATCGAG+CGG + chr4_2:60459479-60459498 Msa0612080:CDS 55.0%
!! GATTCCCATGGTGGTGGAAC+TGG + chr4_2:60459501-60459520 Msa0612080:CDS 55.0%
CCAACCAGTTCCACCACCAT+GGG - chr4_2:60459508-60459527 None:intergenic 55.0%
TCCAACCAGTTCCACCACCA+TGG - chr4_2:60459509-60459528 None:intergenic 55.0%
TGAGAGCTTGAGCCAGGTCT+TGG - chr4_2:60459626-60459645 None:intergenic 55.0%
GACCTGGCTCAAGCTCTCAA+AGG + chr4_2:60459627-60459646 Msa0612080:CDS 55.0%
!! GGCTCCAACTGTTTCTGCCA+AGG + chr4_2:60459886-60459905 Msa0612080:CDS 55.0%
ACTAGCGCGTACTTTGGCCT+TGG - chr4_2:60459906-60459925 None:intergenic 55.0%
CAGCAGTATCCTTGCCTGCA+AGG + chr4_2:60460146-60460165 Msa0612080:CDS 55.0%
CAGAACGATCGACGGCAAGG+AGG - chr4_2:60456909-60456928 None:intergenic 60.0%
CTCCTTGCCGTCGATCGTTC+TGG + chr4_2:60456907-60456926 Msa0612080:five_prime_UTR 60.0%
CACCAGAACGATCGACGGCA+AGG - chr4_2:60456912-60456931 None:intergenic 60.0%
! TTTGGTCGCTCGGGAGGTGT+GGG - chr4_2:60458196-60458215 None:intergenic 60.0%
! TTTTGGTCGCTCGGGAGGTG+TGG - chr4_2:60458197-60458216 None:intergenic 60.0%
!!! GGTGGCGTTTTTGGTCGCTC+GGG - chr4_2:60458205-60458224 None:intergenic 60.0%
GGCTTAGGAGAAGGAGGCCT+AGG - chr4_2:60458253-60458272 None:intergenic 60.0%
GCCCTTGGAGATGGATCCCT+TGG - chr4_2:60458283-60458302 None:intergenic 60.0%
!! CGAAGATGCCGCTTTCGGAG+AGG - chr4_2:60458323-60458342 None:intergenic 60.0%
CTCCGAAAGCGGCATCTTCG+CGG + chr4_2:60458323-60458342 Msa0612080:CDS 60.0%
! GATCGAGCGGATTCCCATGG+TGG + chr4_2:60459492-60459511 Msa0612080:CDS 60.0%
!! CCCATGGTGGTGGAACTGGT+TGG + chr4_2:60459505-60459524 Msa0612080:CDS 60.0%
! GGCCTTTGAGAGCTTGAGCC+AGG - chr4_2:60459632-60459651 None:intergenic 60.0%
!!! GGCGTTTTTGGTCGCTCGGG+AGG - chr4_2:60458202-60458221 None:intergenic 65.0%
GGAGAAGCGGCCCTTGGAGA+TGG - chr4_2:60458292-60458311 None:intergenic 65.0%
! CGCGATCGAGCGGATTCCCA+TGG + chr4_2:60459489-60459508 Msa0612080:CDS 65.0%
! CGAGCGGATTCCCATGGTGG+TGG + chr4_2:60459495-60459514 Msa0612080:CDS 65.0%
ACTCGCGGAGAAGCGGCCCT+TGG - chr4_2:60458298-60458317 None:intergenic 70.0%
! GGTCGCTCGGGAGGTGTGGG+AGG - chr4_2:60458193-60458212 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 60455792 60460425 60455792 ID=Msa0612080;Name=Msa0612080
chr4_2 mRNA 60455792 60460425 60455792 ID=Msa0612080-mRNA-1;Parent=Msa0612080;Name=Msa0612080-mRNA-1;_AED=0.12;_eAED=0.12;_QI=536|1|1|1|0.66|0.57|7|224|534
chr4_2 exon 60455792 60456257 60455792 ID=Msa0612080-mRNA-1:exon:16278;Parent=Msa0612080-mRNA-1
chr4_2 exon 60456882 60456928 60456882 ID=Msa0612080-mRNA-1:exon:16279;Parent=Msa0612080-mRNA-1
chr4_2 exon 60457154 60457242 60457154 ID=Msa0612080-mRNA-1:exon:16280;Parent=Msa0612080-mRNA-1
chr4_2 exon 60458034 60458447 60458034 ID=Msa0612080-mRNA-1:exon:16281;Parent=Msa0612080-mRNA-1
chr4_2 exon 60458742 60458975 60458742 ID=Msa0612080-mRNA-1:exon:16282;Parent=Msa0612080-mRNA-1
chr4_2 exon 60459137 60459268 60459137 ID=Msa0612080-mRNA-1:exon:16283;Parent=Msa0612080-mRNA-1
chr4_2 exon 60459443 60460425 60459443 ID=Msa0612080-mRNA-1:exon:16284;Parent=Msa0612080-mRNA-1
chr4_2 five_prime_UTR 60455792 60456257 60455792 ID=Msa0612080-mRNA-1:five_prime_utr;Parent=Msa0612080-mRNA-1
chr4_2 five_prime_UTR 60456882 60456928 60456882 ID=Msa0612080-mRNA-1:five_prime_utr;Parent=Msa0612080-mRNA-1
chr4_2 five_prime_UTR 60457154 60457176 60457154 ID=Msa0612080-mRNA-1:five_prime_utr;Parent=Msa0612080-mRNA-1
chr4_2 CDS 60457177 60457242 60457177 ID=Msa0612080-mRNA-1:cds;Parent=Msa0612080-mRNA-1
chr4_2 CDS 60458034 60458447 60458034 ID=Msa0612080-mRNA-1:cds;Parent=Msa0612080-mRNA-1
chr4_2 CDS 60458742 60458975 60458742 ID=Msa0612080-mRNA-1:cds;Parent=Msa0612080-mRNA-1
chr4_2 CDS 60459137 60459268 60459137 ID=Msa0612080-mRNA-1:cds;Parent=Msa0612080-mRNA-1
chr4_2 CDS 60459443 60460201 60459443 ID=Msa0612080-mRNA-1:cds;Parent=Msa0612080-mRNA-1
chr4_2 three_prime_UTR 60460202 60460425 60460202 ID=Msa0612080-mRNA-1:three_prime_utr;Parent=Msa0612080-mRNA-1
Gene Sequence

>Msa0612080

ATGGGAAAGAAGGGGAGTTGGTTTTCAGCAATCAAAAGGGTTTTTACACACCACTCTAAGGGGAAGGATTCAGAAAACAAAAGCACAAAAGAGAAGAAGAAAGGTGTAGGAAAACTAAAGCATGGAGAGACCAATTCTTTCATCCCCCTCTTCAGAGAACCAAGCAGCATTGAGAAAATATTTGGGGACTTTGAAAGAGAACAACAAGTACTTGCAATTAGGCCTCCCACACCTCCCGAGCGACCAAAAACGCCACCTTTCGTCCCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCTCCTAAGCCTCCTTCTCCAAGGGATCCATCTCCAAGGGCCGCTTCTCCGCGAGTTACCTCTCCGAAAGCGGCATCTTCGCGGAATGTTCATCAACACAAGGAGGTTCGCAACAGACCAGAACCAACTTTACAGAACCAGCATGTCTCGGCGACTAAGATCCAGGCTGCTTACAGAGGTTATATGGCCAGGAAGAGTTTTAGAGCTCTGAAAGGTTTGGTAAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAGTTAATGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAGTCTCAGATTCAATCTCAAAGAATCCAGATGTTAGAAAACCAGGCACGATATCAAGCCGAGTACAAGAATGAAGCTGGAAGTACCTTGGGGAAAAGTGCTTTAGGACATGGTTCTGAGGCAGGTAACAATGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGAAGCGAGGTTGCAGAGGAAGGTTGAAGCAATCATCAAAAGAGAGAGATCAATGGCATTTGCATATTCACATCAGTTATGGAAGGCCACTCCAAAATCAACTCAAACGCCTGTGACAGATACGCGATCGAGCGGATTCCCATGGTGGTGGAACTGGTTGGAAAGACAATTACCTGCATCAAACCCACAAGAAAAACAGGTCCTGAAGAATTTCCAATTCACACCACCAAGACCTTATTCGGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCTCTCAAAGGCCTTTTGCCTTTGATAACATGGATACACCAACTCCAAAATCAACAAGATCGACTATATTTCCATCTTCAAAACCATCTAGAACTCCTCCATTTAGAACTCCACAAGGAAACACTTCAAGCGTGACGTCAAAATATTCAAGGCCAAGGGGAGTAGGATCCAATTCACCTTTCGACGTACCATTGAAGGACGATGACAGTCTCACAAGCTGTCCACCGTTCTCCGTTCCAAACTACATGGCTCCAACTGTTTCTGCCAAGGCCAAAGTACGCGCTAGTAGTAATCCAAGAGAAAGATTTGGCGGTGGTAGTAGTGGCTGTGCAACTCCAACAAGCACTGATTCCAAGAGGAGAGTCTCATTTCCTTTGTCACAAGGAATAGGGTCATTCAAATGGAATAAAGGGTCAATGTTCTCTAGAAATAAGGATTCTCATGGCTCTCACAGGACTCCAGATAAATACCAGTCACTTGAATCTATTGGAAATGTGAGTGTGGATTCAGCAGTATCCTTGCCTGCAAGGGTTGAAAGAAAGCCTTTTACAAGATTTGTGTGA
Protein sequence

>Msa0612080

MGKKGSWFSAIKRVFTHHSKGKDSENKSTKEKKKGVGKLKHGETNSFIPLFREPSSIEKIFGDFEREQQVLAIRPPTPPERPKTPPFVPPRVASPRPPSPKPPSPRDPSPRAASPRVTSPKAASSRNVHQHKEVRNRPEPTLQNQHVSATKIQAAYRGYMARKSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSQRIQMLENQARYQAEYKNEAGSTLGKSALGHGSEAGNNEDWDDSLLTKEEVEARLQRKVEAIIKRERSMAFAYSHQLWKATPKSTQTPVTDTRSSGFPWWWNWLERQLPASNPQEKQVLKNFQFTPPRPYSEQKTSPRPGSSSQRPFAFDNMDTPTPKSTRSTIFPSSKPSRTPPFRTPQGNTSSVTSKYSRPRGVGSNSPFDVPLKDDDSLTSCPPFSVPNYMAPTVSAKAKVRASSNPRERFGGGSSGCATPTSTDSKRRVSFPLSQGIGSFKWNKGSMFSRNKDSHGSHRTPDKYQSLESIGNVSVDSAVSLPARVERKPFTRFV*