AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0556660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0556660 MtrunA17_Chr4g0045641 98.315 534 9 0 1 534 1 534 0.0 1069
Msa0556660 MtrunA17_Chr6g0462191 36.416 346 175 14 140 474 101 412 1.10e-39 149
Msa0556660 MtrunA17_Chr7g0263731 34.270 356 183 11 146 474 108 439 2.10e-37 144
Msa0556660 MtrunA17_Chr1g0181581 31.638 354 188 10 144 474 114 436 5.68e-35 137
Msa0556660 MtrunA17_Chr4g0020671 26.119 536 268 19 3 522 4 427 2.06e-33 132
Msa0556660 MtrunA17_Chr1g0200161 37.838 185 106 4 144 327 139 315 2.56e-32 129
Msa0556660 MtrunA17_Chr8g0346021 27.757 526 285 17 1 472 1 485 1.25e-31 128
Msa0556660 MtrunA17_Chr7g0273861 28.529 340 180 10 142 476 121 402 7.95e-29 118
Msa0556660 MtrunA17_Chr4g0025441 34.018 341 169 17 148 479 98 391 2.12e-24 105
Msa0556660 MtrunA17_Chr2g0316401 31.892 185 106 5 137 316 65 234 9.43e-21 93.2
Msa0556660 MtrunA17_Chr2g0283321 32.961 179 105 7 147 324 64 228 2.71e-19 88.6
Msa0556660 MtrunA17_Chr3g0135851 27.596 366 200 12 111 445 55 386 3.07e-19 90.5
Msa0556660 MtrunA17_Chr1g0146931 31.250 320 155 10 148 442 124 403 9.28e-18 86.3
Msa0556660 MtrunA17_Chr6g0472551 43.038 79 45 0 142 220 113 191 1.79e-16 82.0
Msa0556660 MtrunA17_Chr3g0126901 27.532 316 163 8 148 454 114 372 5.20e-15 77.4
Msa0556660 MtrunA17_Chr1g0203711 44.776 67 37 0 145 211 114 180 1.85e-14 75.5
Msa0556660 MtrunA17_Chr8g0389781 41.667 84 43 1 144 221 124 207 1.06e-13 73.2
Msa0556660 MtrunA17_Chr1g0172611 31.206 141 86 3 147 282 106 240 2.13e-13 72.0
Msa0556660 MtrunA17_Chr7g0273951 46.970 66 35 0 148 213 108 173 3.16e-13 71.6
Msa0556660 MtrunA17_Chr4g0060381 47.619 63 33 0 148 210 102 164 3.19e-13 72.4
Msa0556660 MtrunA17_Chr2g0330921 51.613 62 30 0 147 208 98 159 6.41e-13 70.1
Msa0556660 MtrunA17_Chr8g0371131 50.000 62 31 0 148 209 73 134 1.49e-12 65.1
Msa0556660 MtrunA17_Chr1g0204901 41.176 68 40 0 145 212 135 202 2.43e-12 68.9
Msa0556660 MtrunA17_Chr4g0057321 50.820 61 30 0 148 208 90 150 7.46e-12 67.4
Msa0556660 MtrunA17_Chr8g0340761 45.902 61 33 0 148 208 128 188 8.96e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0556660 AT3G59690.2 51.408 568 189 18 1 533 1 516 8.60e-161 468
Msa0556660 AT3G59690.1 51.408 568 189 18 1 533 1 516 8.60e-161 468
Msa0556660 AT2G43680.1 52.772 451 139 16 92 534 285 669 2.53e-124 379
Msa0556660 AT2G43680.1 55.396 139 45 5 1 126 1 135 1.69e-25 111
Msa0556660 AT2G43680.4 52.772 451 139 16 92 534 284 668 2.59e-124 379
Msa0556660 AT2G43680.4 58.696 138 41 5 1 126 1 134 2.07e-25 110
Msa0556660 AT2G43680.2 52.772 451 139 16 92 534 284 668 2.59e-124 379
Msa0556660 AT2G43680.2 58.696 138 41 5 1 126 1 134 2.07e-25 110
Msa0556660 AT2G43680.3 52.772 451 139 16 92 534 284 668 2.59e-124 379
Msa0556660 AT2G43680.3 58.696 138 41 5 1 126 1 134 2.07e-25 110
Msa0556660 AT2G43680.5 52.772 451 139 16 92 534 284 668 2.59e-124 379
Msa0556660 AT2G43680.5 58.696 138 41 5 1 126 1 134 2.07e-25 110
Msa0556660 AT5G03040.1 29.804 510 251 18 1 477 1 436 1.81e-40 152
Msa0556660 AT5G03040.3 29.804 510 251 18 1 477 1 436 1.81e-40 152
Msa0556660 AT5G03040.2 29.804 510 251 18 1 477 1 436 1.81e-40 152
Msa0556660 AT3G52290.1 33.876 307 169 10 145 444 107 386 2.37e-39 149
Msa0556660 AT1G01110.2 28.081 495 262 20 1 449 1 447 1.68e-30 125
Msa0556660 AT5G13460.1 29.819 332 163 10 118 449 90 351 1.08e-28 119
Msa0556660 AT3G49260.1 29.470 302 174 6 148 441 122 392 5.88e-27 114
Msa0556660 AT3G49260.4 29.470 302 174 6 148 441 122 392 5.88e-27 114
Msa0556660 AT3G49260.2 29.470 302 174 6 148 441 122 392 5.88e-27 114
Msa0556660 AT3G49260.3 28.477 302 178 5 148 441 122 393 8.63e-27 114
Msa0556660 AT2G26410.2 36.517 178 94 5 145 316 147 311 3.13e-26 112
Msa0556660 AT2G26410.1 36.517 178 94 5 145 316 147 311 3.13e-26 112
Msa0556660 AT4G00820.1 30.874 366 193 15 145 473 131 473 5.23e-25 108
Msa0556660 AT3G09710.1 38.012 171 95 4 145 314 107 267 9.60e-25 107
Msa0556660 AT3G09710.2 36.517 178 102 4 145 314 107 281 9.34e-24 104
Msa0556660 AT2G26180.1 34.314 204 114 6 148 341 86 279 3.22e-23 102
Msa0556660 AT3G22190.3 38.710 186 89 6 148 325 90 258 8.40e-23 101
Msa0556660 AT3G22190.2 38.710 186 89 6 148 325 90 258 8.40e-23 101
Msa0556660 AT3G22190.4 38.710 186 89 6 148 325 90 258 8.40e-23 101
Msa0556660 AT3G22190.1 38.710 186 89 6 148 325 90 258 8.40e-23 101
Msa0556660 AT2G33990.1 32.579 221 120 9 148 363 49 245 5.83e-22 95.9
Msa0556660 AT1G72670.1 32.323 198 101 7 142 326 89 266 2.60e-18 87.8
Msa0556660 AT1G17480.1 36.296 135 67 2 148 282 96 211 4.68e-18 86.7
Msa0556660 AT4G10640.1 33.333 165 83 4 140 283 94 252 8.83e-18 86.3
Msa0556660 AT3G15050.1 32.821 195 111 7 131 316 27 210 1.01e-17 83.6
Msa0556660 AT5G03960.1 35.036 137 84 1 146 282 107 238 1.39e-14 76.3
Msa0556660 AT5G03960.3 35.036 137 84 1 146 282 108 239 1.44e-14 76.3
Msa0556660 AT5G03960.2 35.036 137 84 1 146 282 108 239 1.44e-14 76.3
Msa0556660 AT4G14750.1 45.588 68 37 0 145 212 104 171 6.34e-14 73.9
Msa0556660 AT4G14750.3 45.588 68 37 0 145 212 163 230 9.81e-14 73.9
Msa0556660 AT4G14750.2 47.692 65 34 0 148 212 166 230 1.00e-13 73.9
Msa0556660 AT1G18840.1 44.615 65 36 0 145 209 108 172 1.29e-13 73.9
Msa0556660 AT1G18840.3 44.615 65 36 0 145 209 108 172 1.29e-13 73.9
Msa0556660 AT1G18840.2 44.615 65 36 0 145 209 108 172 1.29e-13 73.9
Msa0556660 AT5G62070.1 51.786 56 27 0 145 200 116 171 2.66e-13 72.4
Msa0556660 AT3G16490.1 48.387 62 32 0 148 209 109 170 2.73e-13 72.0
Msa0556660 AT5G07240.1 46.774 62 33 0 145 206 105 166 3.67e-13 71.6
Msa0556660 AT5G07240.2 46.774 62 33 0 145 206 151 212 4.31e-13 72.0
Msa0556660 AT3G49380.1 37.634 93 55 1 145 234 109 201 1.29e-12 69.7
Msa0556660 AT1G74690.1 27.647 170 86 4 145 309 112 249 1.30e-12 70.9
Msa0556660 AT3G51380.1 42.857 70 40 0 140 209 31 100 2.59e-12 63.9
Msa0556660 AT1G51960.1 42.857 77 39 1 148 224 102 173 4.62e-12 68.2
Msa0556660 AT4G29150.1 43.750 64 36 0 145 208 130 193 7.25e-12 67.8
Msa0556660 AT1G01110.1 25.085 295 172 12 191 449 3 284 9.02e-11 64.3

Find 181 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAGCATTGAGAAAATATT+TGG 0.147656 4_1:+54920224 Msa0556660:CDS
ATAGTCGATCTTGTTGATTT+TGG 0.221689 4_1:-54921873 None:intergenic
AATCACACAAATCTTGTAAA+AGG 0.233035 4_1:-54922371 None:intergenic
GGCTTTCTTTCAACCCTTGC+AGG 0.240511 4_1:-54922350 None:intergenic
ACAGGCGTTTGAGTTGATTT+TGG 0.283729 4_1:-54921648 None:intergenic
TTTCCTTGTGGAGTTCTAAA+TGG 0.286373 4_1:-54921927 None:intergenic
TCAAGTGACTGGTATTTATC+TGG 0.291478 4_1:-54922287 None:intergenic
GTCAATGTTCTCTAGAAATA+AGG 0.300536 4_1:+54922241 Msa0556660:CDS
TAATTATAAACTCCATAAAA+AGG 0.305338 4_1:+54918081 Msa0556660:five_prime_UTR
TTTCCTTTGTCACAAGGAAT+AGG 0.310912 4_1:+54922197 Msa0556660:CDS
GGGTCATTCAAATGGAATAA+AGG 0.327034 4_1:+54922218 Msa0556660:CDS
GTGTGAATTGGAAATTCTTC+AGG 0.333924 4_1:-54921758 None:intergenic
CTCTTGGAATCAGTGCTTGT+TGG 0.334476 4_1:-54922164 None:intergenic
TTCAACTAACTTTACTTCAA+TGG 0.337534 4_1:-54917936 None:intergenic
TGAGAGCTTGAGCCAGGTCT+TGG 0.341364 4_1:-54921813 None:intergenic
CTCTAAGAATCCAATTCCTT+TGG 0.348787 4_1:-54918136 None:intergenic
TACCAGTCACTTGAATCTAT+TGG 0.350119 4_1:+54922296 Msa0556660:CDS
ACAGTTGGAGCCATGTAGTT+TGG 0.351130 4_1:-54922065 None:intergenic
GGCTGCTTACAGAGGTTATA+TGG 0.351906 4_1:+54920520 Msa0556660:CDS
CTCCTTGCCGTCGATCGTTC+TGG 0.357847 4_1:+54919001 Msa0556660:five_prime_UTR
CACACCACCAAGACCATATT+CGG 0.361031 4_1:+54921776 Msa0556660:CDS
TTCCTTTGTCACAAGGAATA+GGG 0.362580 4_1:+54922198 Msa0556660:CDS
CAGAGCTCTAAAACTCTTCC+TGG 0.366223 4_1:-54920836 None:intergenic
ACCTTTCGACGTACCATTGA+AGG 0.378126 4_1:+54922004 Msa0556660:CDS
TTCCGCGAAGATGCCGCTTT+CGG 0.379549 4_1:-54920419 None:intergenic
GCAGCATTGAGAAAATATTT+GGG 0.385983 4_1:+54920225 Msa0556660:CDS
ATTATAAAACGGTTTATGTT+TGG 0.389197 4_1:-54917870 None:intergenic
TGGTTCTGTAAAGTTGGTTC+TGG 0.389882 4_1:-54920473 None:intergenic
TAACAGCTGCATGTGTTTCA+TGG 0.394012 4_1:-54920923 None:intergenic
ATGGTCTTGGTGGTGTGAAT+TGG 0.398616 4_1:-54921770 None:intergenic
GGTCATTCAAATGGAATAAA+GGG 0.400507 4_1:+54922219 Msa0556660:CDS
TTTAGGAGTTATTGTAACTT+TGG 0.403066 4_1:+54918305 Msa0556660:five_prime_UTR
CTAAATGGAGGAGTTCTAGA+TGG 0.403634 4_1:-54921912 None:intergenic
GGCCTTTGAGAGCTTGAGCC+AGG 0.404316 4_1:-54921819 None:intergenic
AAAGGTTTGGTAAGGCTTCA+AGG 0.407441 4_1:+54920859 Msa0556660:CDS
AATGAAGCTGGAAGTACCTT+GGG 0.409619 4_1:+54921024 Msa0556660:CDS
AAGTAACAAACCAAAGGAAT+TGG 0.409738 4_1:+54918126 Msa0556660:five_prime_UTR
TCAACTAACTTTACTTCAAT+GGG 0.411536 4_1:-54917935 None:intergenic
AACAACAAGTACTTGCAATT+AGG 0.413110 4_1:+54920261 Msa0556660:CDS
TGCTACTGAGATGGGAAAGA+AGG 0.416486 4_1:+54919261 Msa0556660:exon
TGGTACGTCGAAAGGTGAAT+TGG 0.417209 4_1:-54921997 None:intergenic
CCACCGCCAAATCTTTCTCT+TGG 0.423496 4_1:-54922122 None:intergenic
ACCTTGGGGAAAAGTGCTTT+AGG 0.429209 4_1:+54921039 Msa0556660:CDS
TTAAACTTACAGGAAGAAAC+AGG 0.431182 4_1:+54919236 Msa0556660:intron
TTATAGCATAGCAACACATT+AGG 0.434484 4_1:-54922599 None:intergenic
AGAGAAAGAGAAAATAAAGA+AGG 0.437285 4_1:-54917992 None:intergenic
AGGCAGGTAACAATGAAGAT+TGG 0.438407 4_1:+54921234 Msa0556660:CDS
AGTAATCCAAGAGAAAGATT+TGG 0.440973 4_1:+54922116 Msa0556660:CDS
TTTGGTCGCTCGGGAGGTGT+GGG 0.442251 4_1:-54920287 None:intergenic
AAGGAATAGGGTCATTCAAA+TGG 0.447925 4_1:+54922210 Msa0556660:CDS
GCCCTTGGAGATGGATCCCT+TGG 0.448654 4_1:-54920374 None:intergenic
ACTCGGCTTGATATCGTGCC+TGG 0.450049 4_1:-54920996 None:intergenic
TATGATTGAGAGTGTATTAG+TGG 0.456025 4_1:+54922471 Msa0556660:three_prime_UTR
GGCATTTGCATATTCACATC+AGG 0.465718 4_1:+54921340 Msa0556660:CDS
AGGAAATGAGACTCTCCTCT+TGG 0.466551 4_1:-54922180 None:intergenic
GGCAGGTAACAATGAAGATT+GGG 0.469502 4_1:+54921235 Msa0556660:CDS
GGCTTAGGAGAAGGAGGCCT+AGG 0.481446 4_1:-54920344 None:intergenic
TCCAGCTTCATTCTTGTACT+CGG 0.482184 4_1:-54921013 None:intergenic
GATTCCCATGGTGGTGGAAC+TGG 0.486021 4_1:+54921691 Msa0556660:CDS
AAACAGGAATGCTACTGAGA+TGG 0.487048 4_1:+54919252 Msa0556660:exon
TCCTTCAATGGTACGTCGAA+AGG 0.487272 4_1:-54922005 None:intergenic
GAGCTCTGAAAGGTTTGGTA+AGG 0.487495 4_1:+54920851 Msa0556660:CDS
GCGTGACGTCAAAATATTCA+AGG 0.487546 4_1:+54921958 Msa0556660:CDS
CTCCGAAAGCGGCATCTTCG+CGG 0.487625 4_1:+54920417 Msa0556660:CDS
GGAGAAGCGGCCCTTGGAGA+TGG 0.488016 4_1:-54920383 None:intergenic
AGATGGGAAAGAAGGGGAGT+TGG 0.488180 4_1:+54919269 Msa0556660:exon
TGCTGCTTGGTTCTCTGAAG+AGG 0.488717 4_1:-54920208 None:intergenic
TCTTTCAACCCTTGCAGGCA+AGG 0.489990 4_1:-54922345 None:intergenic
GAAGTATTATGTGGTACTGC+TGG 0.491815 4_1:+54918170 Msa0556660:five_prime_UTR
TCCCTTGGAGAAGGAGGCTT+AGG 0.492264 4_1:-54920359 None:intergenic
TGTCTCGGCGACTAAGATCC+AGG 0.493274 4_1:+54920499 Msa0556660:CDS
AGAGAAAATAAAGAAGGGTA+TGG 0.495233 4_1:-54917986 None:intergenic
CTCCTAAGCCTCCTTCTCCA+AGG 0.498883 4_1:+54920357 Msa0556660:CDS
TTGAACATTGAGTGAGAAAG+TGG 0.499614 4_1:+54917954 Msa0556660:five_prime_UTR
GCCGAGTACAAGAATGAAGC+TGG 0.501793 4_1:+54921012 Msa0556660:CDS
CTCCTAGAGTTGCTTCTCCT+AGG 0.502361 4_1:+54920327 Msa0556660:CDS
AACAGGAATGCTACTGAGAT+GGG 0.502497 4_1:+54919253 Msa0556660:exon
ACATGCTGGTTCTGTAAAGT+TGG 0.510843 4_1:-54920479 None:intergenic
ACTCGCGGAGAAGCGGCCCT+TGG 0.513311 4_1:-54920389 None:intergenic
GAATGAAGCTGGAAGTACCT+TGG 0.515373 4_1:+54921023 Msa0556660:CDS
GAGAAAGAGAAAATAAAGAA+GGG 0.516242 4_1:-54917991 None:intergenic
AGGCTTCAAGGAGTGGTAAG+AGG 0.518282 4_1:+54920871 Msa0556660:CDS
GAATTTAGTACATTATAAAA+CGG 0.519826 4_1:-54917881 None:intergenic
GGTCGCTCGGGAGGTGTGGG+AGG 0.522529 4_1:-54920284 None:intergenic
AGACTGTCATCGTCCTTCAA+TGG 0.522835 4_1:-54922017 None:intergenic
AAAGAAGGGTATGGTATGGT+TGG 0.523898 4_1:-54917977 None:intergenic
TATTCAAGGCCAAGGGGAGT+AGG 0.527231 4_1:+54921972 Msa0556660:CDS
AGCACAAAAGAGAAGAAGAA+AGG 0.528405 4_1:+54920143 Msa0556660:CDS
CCAACCAGTTCCACCACCAT+GGG 0.530319 4_1:-54921695 None:intergenic
GAATTGGATCCTACTCCCCT+TGG 0.530551 4_1:-54921981 None:intergenic
CTCGATCGCGTATCTGTCAC+AGG 0.530625 4_1:-54921666 None:intergenic
GACCCTATTCCTTGTGACAA+AGG 0.531331 4_1:-54922200 None:intergenic
CGTCAAAATATTCAAGGCCA+AGG 0.538050 4_1:+54921964 Msa0556660:CDS
GCTACTGAGATGGGAAAGAA+GGG 0.538126 4_1:+54919262 Msa0556660:exon
TTCCAATAGATTCAAGTGAC+TGG 0.538161 4_1:-54922298 None:intergenic
AGAAAGAGAGAAGTATTATG+TGG 0.540070 4_1:+54918161 Msa0556660:five_prime_UTR
TCCTAAGCCTCCTTCTCCAA+GGG 0.542552 4_1:+54920358 Msa0556660:CDS
AGCAGTATCCTTGCCTGCAA+GGG 0.545645 4_1:+54922337 Msa0556660:CDS
ACTTCAATGGGAAGACTATG+TGG 0.546156 4_1:-54917923 None:intergenic
ATTACTACTAGCGCGTACTT+TGG 0.546568 4_1:-54922099 None:intergenic
GCTGCTTGGTTCTCTGAAGA+GGG 0.546752 4_1:-54920207 None:intergenic
GTCTCATTTCCTTTGTCACA+AGG 0.546913 4_1:+54922191 Msa0556660:CDS
AGAAGCGAGGTTGCAGAGGA+AGG 0.547317 4_1:+54921286 Msa0556660:CDS
TCCATGTTATCAAAGGCAAA+AGG 0.548096 4_1:-54921840 None:intergenic
CGAGCGGATTCCCATGGTGG+TGG 0.550081 4_1:+54921685 Msa0556660:CDS
TCTTAGTCGCCGAGACATGC+TGG 0.550419 4_1:-54920493 None:intergenic
TTGGCCTTGGCAGAAACAGT+TGG 0.550995 4_1:-54922080 None:intergenic
TGATAGCTTACTGACAAAAG+AGG 0.552866 4_1:+54921259 Msa0556660:CDS
ACGCTTGAAGTGTTTCCTTG+TGG 0.554504 4_1:-54921939 None:intergenic
AAGTAGAAGCGAGGTTGCAG+AGG 0.554875 4_1:+54921282 Msa0556660:CDS
CAGCAGTATCCTTGCCTGCA+AGG 0.555494 4_1:+54922336 Msa0556660:CDS
TACACACCACTCTAAGGGGA+AGG 0.556316 4_1:+54919315 Msa0556660:CDS
GATGGATCCCTTGGAGAAGG+AGG 0.557622 4_1:-54920365 None:intergenic
AATCCAGATGTTAGAAAACC+AGG 0.559159 4_1:+54920978 Msa0556660:CDS
ACTAGCGCGTACTTTGGCCT+TGG 0.561095 4_1:-54922093 None:intergenic
AGGATTCTCATGGCTCTCAC+AGG 0.561873 4_1:+54922261 Msa0556660:CDS
TGTTCCGAATATGGTCTTGG+TGG 0.562203 4_1:-54921780 None:intergenic
CTAGGAGAAGCAACTCTAGG+AGG 0.564157 4_1:-54920326 None:intergenic
TATAACCTCTGTAAGCAGCC+TGG 0.564353 4_1:-54920517 None:intergenic
AAAGAGAAGAAGAAAGGTGT+AGG 0.565399 4_1:+54920149 Msa0556660:CDS
GGCTCCAACTGTTTCTGCCA+AGG 0.565988 4_1:+54922076 Msa0556660:CDS
CATCAAAAGAGAGAGATCAA+TGG 0.567226 4_1:+54921319 Msa0556660:CDS
CCTTGTGGAGTTCTAAATGG+AGG 0.567299 4_1:-54921924 None:intergenic
TGGTACTGCTGGAAAGAAGA+AGG 0.567381 4_1:+54918181 Msa0556660:five_prime_UTR
AGATTTGGCGGTGGTAGTAG+TGG 0.568746 4_1:+54922131 Msa0556660:CDS
ATGTAGTTTGGAACGGAGAA+CGG 0.569098 4_1:-54922053 None:intergenic
GGGAAAAGTGCTTTAGGACA+TGG 0.569234 4_1:+54921045 Msa0556660:CDS
GTCAAAATATTCAAGGCCAA+GGG 0.570622 4_1:+54921965 Msa0556660:CDS
TTTGGTAAGGCTTCAAGGAG+TGG 0.571343 4_1:+54920864 Msa0556660:CDS
AATCCAAGAGAAAGATTTGG+CGG 0.577080 4_1:+54922119 Msa0556660:CDS
GGAGATGGATCCCTTGGAGA+AGG 0.577659 4_1:-54920368 None:intergenic
TGCTTGGTTCTCTGAAGAGG+GGG 0.580393 4_1:-54920205 None:intergenic
CTCCAAGGGATCCATCTCCA+AGG 0.580760 4_1:+54920372 Msa0556660:CDS
GGTGTAGGAAAACTAAAGCA+TGG 0.583060 4_1:+54920164 Msa0556660:CDS
AAATAAAGAAGGGTATGGTA+TGG 0.583286 4_1:-54917981 None:intergenic
AGAGGTAACTCGCGGAGAAG+CGG 0.585392 4_1:-54920396 None:intergenic
TCCAACCAGTTCCACCACCA+TGG 0.585925 4_1:-54921696 None:intergenic
TGGTGTATCCATGTTATCAA+AGG 0.590388 4_1:-54921847 None:intergenic
GGAGAAGGAGGCTTAGGAGA+AGG 0.593364 4_1:-54920353 None:intergenic
TGGAGCCATGTAGTTTGGAA+CGG 0.593443 4_1:-54922060 None:intergenic
GGCCTAGGAGAAGCAACTCT+AGG 0.595533 4_1:-54920329 None:intergenic
GACCTGGCTCAAGCTCTCAA+AGG 0.598818 4_1:+54921817 Msa0556660:CDS
TCCAAGGGATCCATCTCCAA+GGG 0.601031 4_1:+54920373 Msa0556660:CDS
TAGGAGAAGCAACTCTAGGA+GGG 0.605104 4_1:-54920325 None:intergenic
CACCAGAACGATCGACGGCA+AGG 0.605791 4_1:-54919003 None:intergenic
CCTCCATTTAGAACTCCACA+AGG 0.606509 4_1:+54921924 Msa0556660:CDS
GAAGGAGGCTTAGGAGAAGG+AGG 0.609274 4_1:-54920350 None:intergenic
TTTACAGAACCAGCATGTCT+CGG 0.610936 4_1:+54920484 Msa0556660:CDS
TCTAGAAATAAGGATTCTCA+TGG 0.612036 4_1:+54922251 Msa0556660:CDS
GTTCTCCGTTCCAAACTACA+TGG 0.616839 4_1:+54922055 Msa0556660:CDS
CGCGATCGAGCGGATTCCCA+TGG 0.617077 4_1:+54921679 Msa0556660:CDS
AAATTACCTTCCCCTTAGAG+TGG 0.617889 4_1:-54919321 None:intergenic
ATCTATTGGAAATGTGAGTG+TGG 0.620035 4_1:+54922310 Msa0556660:CDS
ACTCTAGGAGGGACGAAAGG+TGG 0.620082 4_1:-54920314 None:intergenic
ACTATGTTAACAGTTATGGA+AGG 0.620863 4_1:+54921620 Msa0556660:intron
AAGCTCACCAGAACGATCGA+CGG 0.622940 4_1:-54919008 None:intergenic
CCAAGAGAAAGATTTGGCGG+TGG 0.631411 4_1:+54922122 Msa0556660:CDS
CAAAAGACAAGTCCAAGACC+TGG 0.632412 4_1:+54921801 Msa0556660:CDS
CAGCATTGAGAAAATATTTG+GGG 0.632868 4_1:+54920226 Msa0556660:CDS
GCGAGTTACCTCTCCGAAAG+CGG 0.633756 4_1:+54920406 Msa0556660:CDS
CAAGAAAAGTAACAAACCAA+AGG 0.635461 4_1:+54918120 Msa0556660:five_prime_UTR
GATCGAGCGGATTCCCATGG+TGG 0.638826 4_1:+54921682 Msa0556660:CDS
CTGCTTGGTTCTCTGAAGAG+GGG 0.639910 4_1:-54920206 None:intergenic
GCAACTCTAGGAGGGACGAA+AGG 0.644669 4_1:-54920317 None:intergenic
AAGCTCTGTGACAACTAACA+AGG 0.646533 4_1:+54918328 Msa0556660:five_prime_UTR
AAGATCCAGGCTGCTTACAG+AGG 0.646831 4_1:+54920512 Msa0556660:CDS
TAAGAGGACAGAATGTGAAG+AGG 0.651089 4_1:+54920887 Msa0556660:CDS
TCAAAATATTCAAGGCCAAG+GGG 0.659140 4_1:+54921966 Msa0556660:CDS
CAACAAGCACTGATTCCAAG+AGG 0.666446 4_1:+54922165 Msa0556660:CDS
GTGACAGATACGCGATCGAG+CGG 0.669089 4_1:+54921669 Msa0556660:CDS
CCCATGGTGGTGGAACTGGT+TGG 0.672536 4_1:+54921695 Msa0556660:CDS
CGAAGATGCCGCTTTCGGAG+AGG 0.682021 4_1:-54920414 None:intergenic
ATGAAGCTGGAAGTACCTTG+GGG 0.697268 4_1:+54921025 Msa0556660:CDS
GCGGAATGTTCATCAACACA+AGG 0.697723 4_1:+54920436 Msa0556660:CDS
CAAAAGAGGAAGTAGAAGCG+AGG 0.699187 4_1:+54921273 Msa0556660:CDS
TAGTTTGGAACGGAGAACGG+TGG 0.711322 4_1:-54922050 None:intergenic
TACTGCTGGAAAGAAGAAGG+AGG 0.712671 4_1:+54918184 Msa0556660:five_prime_UTR
CTACTGAGATGGGAAAGAAG+GGG 0.714772 4_1:+54919263 Msa0556660:exon
CAGAACGATCGACGGCAAGG+AGG 0.716975 4_1:-54919000 None:intergenic
GCTTTCGGAGAGGTAACTCG+CGG 0.724827 4_1:-54920404 None:intergenic
GAATGTTCATCAACACAAGG+AGG 0.727547 4_1:+54920439 Msa0556660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTCTTTTTTACTTA+AGG - chr4_1:54919053-54919072 None:intergenic 10.0%
!!! CTAATTTATTTTTGATAATT+TGG + chr4_1:54921194-54921213 Msa0556660:intron 10.0%
!!! TTTTATTTATGCTTTTATTT+TGG + chr4_1:54921386-54921405 Msa0556660:intron 10.0%
!!! TTTTTTTTATTAGTTTACAA+TGG - chr4_1:54922523-54922542 None:intergenic 10.0%
!! GAATTTAGTACATTATAAAA+CGG - chr4_1:54917884-54917903 None:intergenic 15.0%
!!! TAAATTCTTTTTCTTTATGT+AGG + chr4_1:54917897-54917916 Msa0556660:five_prime_UTR 15.0%
!!! ATAGTAGTAATTTAGATTTT+TGG - chr4_1:54918037-54918056 None:intergenic 15.0%
!!! TTAATTTTCTTTGTATTTGT+GGG - chr4_1:54918064-54918083 None:intergenic 15.0%
!!! ATTAATTTTCTTTGTATTTG+TGG - chr4_1:54918065-54918084 None:intergenic 15.0%
!! TAATTATAAACTCCATAAAA+AGG + chr4_1:54918081-54918100 Msa0556660:five_prime_UTR 15.0%
!! TTGGATATAATTGAATTAAA+AGG - chr4_1:54918564-54918583 None:intergenic 15.0%
!! AAAAATGAAAGATGAATTAT+TGG - chr4_1:54918705-54918724 None:intergenic 15.0%
!! ACATATTAAAACAATGAATA+AGG - chr4_1:54919101-54919120 None:intergenic 15.0%
!! GTTTAAATTAAGATATAGTA+AGG - chr4_1:54919222-54919241 None:intergenic 15.0%
!! ATATCTTAATTTAAACTTAC+AGG + chr4_1:54919226-54919245 Msa0556660:intron 15.0%
!!! AATTTTCTTAATATTACCAA+AGG - chr4_1:54919684-54919703 None:intergenic 15.0%
!!! ATTATTTGAAATATTGCAAA+AGG + chr4_1:54919843-54919862 Msa0556660:intron 15.0%
!! TAAGATAAGTATTAAGTATT+TGG + chr4_1:54920706-54920725 Msa0556660:intron 15.0%
!!! GTTACTTTATATAAAATTGA+TGG - chr4_1:54921101-54921120 None:intergenic 15.0%
!!! AATTAGTCTGATTTATATAA+AGG - chr4_1:54921180-54921199 None:intergenic 15.0%
!!! ATTTTTGTTTCGATTAAAAT+AGG - chr4_1:54921433-54921452 None:intergenic 15.0%
!! AAAATCTTAGATTTAGAAAT+GGG - chr4_1:54921465-54921484 None:intergenic 15.0%
!! AAAAATCTTAGATTTAGAAA+TGG - chr4_1:54921466-54921485 None:intergenic 15.0%
!!! ATTTTTTATGATTAATGATG+TGG + chr4_1:54921538-54921557 Msa0556660:intron 15.0%
!! AAACATTAGACAAATAAAAA+TGG - chr4_1:54922415-54922434 None:intergenic 15.0%
!!! TTTTTATTTGTCTAATGTTT+TGG + chr4_1:54922415-54922434 Msa0556660:three_prime_UTR 15.0%
!! AAAAACATAATAGGAAATAA+TGG + chr4_1:54922540-54922559 Msa0556660:three_prime_UTR 15.0%
!! ATTATAAAACGGTTTATGTT+TGG - chr4_1:54917873-54917892 None:intergenic 20.0%
!!! GAAGATATAGCTTTTAATTA+AGG + chr4_1:54918403-54918422 Msa0556660:intron 20.0%
!! TATTGAATTCCTCATATATT+TGG + chr4_1:54919136-54919155 Msa0556660:intron 20.0%
!! TAAGATATAGTAAGGATTTA+AGG - chr4_1:54919214-54919233 None:intergenic 20.0%
!!! TTTTTTGTCAATAACAGTTT+AGG - chr4_1:54919621-54919640 None:intergenic 20.0%
!!! AAGTATTTGGTTTCTAAATT+TGG + chr4_1:54920719-54920738 Msa0556660:intron 20.0%
!! TAAAAAAGCTGGAAAATTAA+TGG - chr4_1:54920760-54920779 None:intergenic 20.0%
!! AAAGCATAAATAAAAAGTCT+AGG - chr4_1:54921381-54921400 None:intergenic 20.0%
!! TCATAAAAAATTAGCTAAAC+TGG - chr4_1:54921529-54921548 None:intergenic 20.0%
! TCAACTAACTTTACTTCAAT+GGG - chr4_1:54917938-54917957 None:intergenic 25.0%
! TTCAACTAACTTTACTTCAA+TGG - chr4_1:54917939-54917958 None:intergenic 25.0%
! GAGAAAGAGAAAATAAAGAA+GGG - chr4_1:54917994-54918013 None:intergenic 25.0%
! AGAGAAAGAGAAAATAAAGA+AGG - chr4_1:54917995-54918014 None:intergenic 25.0%
! TTTAGGAGTTATTGTAACTT+TGG + chr4_1:54918305-54918324 Msa0556660:five_prime_UTR 25.0%
!! AATTATTGGTCTAGAAACAA+AGG - chr4_1:54918691-54918710 None:intergenic 25.0%
!!! TTCATTTTTCAATTCTTCTC+AGG + chr4_1:54918716-54918735 Msa0556660:intron 25.0%
! ATCTTTAATTGATCATGTGA+TGG + chr4_1:54918779-54918798 Msa0556660:intron 25.0%
!!! TTTCTTGTTTTGCATAAAGA+AGG + chr4_1:54918860-54918879 Msa0556660:intron 25.0%
!! TAAAGAAGGTTCTTTTCTTA+AGG + chr4_1:54918874-54918893 Msa0556660:intron 25.0%
!! AAAGAAGGTTCTTTTCTTAA+GGG + chr4_1:54918875-54918894 Msa0556660:intron 25.0%
!!! AGCATCTCTATTTTATTTTC+AGG - chr4_1:54918979-54918998 None:intergenic 25.0%
! ATTAAGCATTTCACATTTCT+TGG - chr4_1:54919375-54919394 None:intergenic 25.0%
!! TCTTATAAGTGGTTTTCTTA+TGG + chr4_1:54919427-54919446 Msa0556660:intron 25.0%
! ATATGTGTCATATCCTTAAA+TGG - chr4_1:54919475-54919494 None:intergenic 25.0%
! GAACCTTGATATGAATTAAA+AGG - chr4_1:54919767-54919786 None:intergenic 25.0%
!! GAAATATTGCAAAAGGTTTT+AGG + chr4_1:54919850-54919869 Msa0556660:intron 25.0%
! AAGTATGATGTAAGAATGAT+GGG - chr4_1:54919894-54919913 None:intergenic 25.0%
!!! TCTTTATTTTACTACGAATC+CGG + chr4_1:54919992-54920011 Msa0556660:intron 25.0%
! AACTGAAACAAGTTCAAATT+CGG - chr4_1:54920061-54920080 None:intergenic 25.0%
! ATCATTCTTATTAACATAGC+AGG + chr4_1:54920106-54920125 Msa0556660:intron 25.0%
!!! AATAGAATTTAGCCTTTTTG+AGG + chr4_1:54920574-54920593 Msa0556660:intron 25.0%
! CTTAATACTTATCTTAGATG+AGG - chr4_1:54920702-54920721 None:intergenic 25.0%
! TTTGTTTCGATTAAAATAGG+TGG - chr4_1:54921430-54921449 None:intergenic 25.0%
! AATCACACAAATCTTGTAAA+AGG - chr4_1:54922374-54922393 None:intergenic 25.0%
!!! TTATTTGTCTAATGTTTTGG+TGG + chr4_1:54922418-54922437 Msa0556660:three_prime_UTR 25.0%
! AAATAAAGAAGGGTATGGTA+TGG - chr4_1:54917984-54918003 None:intergenic 30.0%
AGAGAAAATAAAGAAGGGTA+TGG - chr4_1:54917989-54918008 None:intergenic 30.0%
AAACTCCATAAAAAGGTGAA+AGG + chr4_1:54918088-54918107 Msa0556660:five_prime_UTR 30.0%
CAAGAAAAGTAACAAACCAA+AGG + chr4_1:54918120-54918139 Msa0556660:five_prime_UTR 30.0%
AAGTAACAAACCAAAGGAAT+TGG + chr4_1:54918126-54918145 Msa0556660:five_prime_UTR 30.0%
!! AGAAAGAGAGAAGTATTATG+TGG + chr4_1:54918161-54918180 Msa0556660:five_prime_UTR 30.0%
!!! AGAGAGAGTTTCTTCTTTTT+TGG + chr4_1:54918256-54918275 Msa0556660:five_prime_UTR 30.0%
! GTAACTTTGACAGTACTTTT+AGG + chr4_1:54918288-54918307 Msa0556660:five_prime_UTR 30.0%
TGTTATGAATCATGTTGTGT+TGG + chr4_1:54918460-54918479 Msa0556660:intron 30.0%
! AACAATAACTGACTTTACCT+CGG + chr4_1:54918535-54918554 Msa0556660:intron 30.0%
TGATACATAAATCTTCTGAC+AGG - chr4_1:54918587-54918606 None:intergenic 30.0%
TTATGAACATGTGAAAGAGA+AGG - chr4_1:54918646-54918665 None:intergenic 30.0%
TTGTTTAGACAACCAATCTA+AGG - chr4_1:54918807-54918826 None:intergenic 30.0%
AGGATATACAACAATCAACA+TGG - chr4_1:54919081-54919100 None:intergenic 30.0%
TGAATTCCTCATATATTTGG+AGG + chr4_1:54919139-54919158 Msa0556660:intron 30.0%
TTAAACTTACAGGAAGAAAC+AGG + chr4_1:54919236-54919255 Msa0556660:intron 30.0%
!! TTGGTTTTCAGCAATCAAAA+GGG + chr4_1:54919288-54919307 Msa0556660:CDS 30.0%
! CCTTAAATGGTTAACCATTT+TGG - chr4_1:54919462-54919481 None:intergenic 30.0%
CCAAAATGGTTAACCATTTA+AGG + chr4_1:54919459-54919478 Msa0556660:intron 30.0%
ACAGTCTATTCTCATCAAAT+TGG - chr4_1:54919651-54919670 None:intergenic 30.0%
TTGATGAGAATAGACTGTAA+TGG + chr4_1:54919653-54919672 Msa0556660:intron 30.0%
TGGAATGTTCATAACTCATA+AGG - chr4_1:54919710-54919729 None:intergenic 30.0%
!! AATCAACCGGAATTTTGATA+CGG - chr4_1:54919742-54919761 None:intergenic 30.0%
!! TGGCCTTTTAATTCATATCA+AGG + chr4_1:54919761-54919780 Msa0556660:intron 30.0%
CAAGTATGATGTAAGAATGA+TGG - chr4_1:54919895-54919914 None:intergenic 30.0%
AAACAAAGTTCAGACAAAAG+AGG - chr4_1:54919946-54919965 None:intergenic 30.0%
!! TTTTGTCTGAACTTTGTTTC+TGG + chr4_1:54919947-54919966 Msa0556660:intron 30.0%
AGAACTTAATGCAACTTCAA+AGG - chr4_1:54920034-54920053 None:intergenic 30.0%
! AATATTTTCTCAATGCTGCT+TGG - chr4_1:54920224-54920243 None:intergenic 30.0%
! AGCAGCATTGAGAAAATATT+TGG + chr4_1:54920224-54920243 Msa0556660:CDS 30.0%
! GCAGCATTGAGAAAATATTT+GGG + chr4_1:54920225-54920244 Msa0556660:CDS 30.0%
! CAGCATTGAGAAAATATTTG+GGG + chr4_1:54920226-54920245 Msa0556660:CDS 30.0%
AACAACAAGTACTTGCAATT+AGG + chr4_1:54920261-54920280 Msa0556660:CDS 30.0%
GTTCTCCTTACAAACATATT+CGG + chr4_1:54920598-54920617 Msa0556660:intron 30.0%
TTCTCCTTACAAACATATTC+GGG + chr4_1:54920599-54920618 Msa0556660:intron 30.0%
AATTCCCGAATATGTTTGTA+AGG - chr4_1:54920606-54920625 None:intergenic 30.0%
! TGGAAAATTAATGGATCTAG+CGG - chr4_1:54920751-54920770 None:intergenic 30.0%
TTCATGATCGATAAAAAAGC+TGG - chr4_1:54920771-54920790 None:intergenic 30.0%
AGTATCCTAACTGTAATATG+TGG + chr4_1:54920796-54920815 Msa0556660:intron 30.0%
AAGTACCACATATTACAGTT+AGG - chr4_1:54920804-54920823 None:intergenic 30.0%
ATGTGGTACTTGCAATATAT+AGG + chr4_1:54920813-54920832 Msa0556660:intron 30.0%
! TGGAATTTTTGTAAAGTCTG+AGG + chr4_1:54921214-54921233 Msa0556660:intron 30.0%
AAATTAGCTAAACTGGATTG+TGG - chr4_1:54921522-54921541 None:intergenic 30.0%
GTTGACTATGTTAACAGTTA+TGG + chr4_1:54921616-54921635 Msa0556660:intron 30.0%
ACTATGTTAACAGTTATGGA+AGG + chr4_1:54921620-54921639 Msa0556660:intron 30.0%
!!! ATAGTCGATCTTGTTGATTT+TGG - chr4_1:54921876-54921895 None:intergenic 30.0%
AGTAATCCAAGAGAAAGATT+TGG + chr4_1:54922116-54922135 Msa0556660:CDS 30.0%
GGTCATTCAAATGGAATAAA+GGG + chr4_1:54922219-54922238 Msa0556660:CDS 30.0%
! GTCAATGTTCTCTAGAAATA+AGG + chr4_1:54922241-54922260 Msa0556660:CDS 30.0%
TCTAGAAATAAGGATTCTCA+TGG + chr4_1:54922251-54922270 Msa0556660:CDS 30.0%
! TATGATTGAGAGTGTATTAG+TGG + chr4_1:54922471-54922490 Msa0556660:three_prime_UTR 30.0%
TTGAACATTGAGTGAGAAAG+TGG + chr4_1:54917954-54917973 Msa0556660:five_prime_UTR 35.0%
! AGCAACCTTTCACCTTTTTA+TGG - chr4_1:54918096-54918115 None:intergenic 35.0%
! CTCTAAGAATCCAATTCCTT+TGG - chr4_1:54918139-54918158 None:intergenic 35.0%
! ACAATAACTGACTTTACCTC+GGG + chr4_1:54918536-54918555 Msa0556660:intron 35.0%
ATTGAATTAAAAGGATCCCG+AGG - chr4_1:54918555-54918574 None:intergenic 35.0%
ACATAAATCTTCTGACAGGT+TGG - chr4_1:54918583-54918602 None:intergenic 35.0%
TTCCTCATATATTTGGAGGT+AGG + chr4_1:54919143-54919162 Msa0556660:intron 35.0%
!!! GTTGGTTTTCAGCAATCAAA+AGG + chr4_1:54919287-54919306 Msa0556660:CDS 35.0%
! GTTTTTACACACCACTCTAA+GGG + chr4_1:54919310-54919329 Msa0556660:CDS 35.0%
! TTTTTACACACCACTCTAAG+GGG + chr4_1:54919311-54919330 Msa0556660:CDS 35.0%
TTGGAACAGACATTGTAAGA+AGG - chr4_1:54919356-54919375 None:intergenic 35.0%
GTTGTGGTTCTTCTTATAAG+TGG + chr4_1:54919416-54919435 Msa0556660:intron 35.0%
TATGGCATTAGATGCCAAAA+TGG + chr4_1:54919445-54919464 Msa0556660:intron 35.0%
GATTCAAACCATGTTCTTGA+GGG - chr4_1:54919498-54919517 None:intergenic 35.0%
AGATTCAAACCATGTTCTTG+AGG - chr4_1:54919499-54919518 None:intergenic 35.0%
! TTTTGATACGGTAGAAGCTT+TGG - chr4_1:54919730-54919749 None:intergenic 35.0%
CTTCTACCGTATCAAAATTC+CGG + chr4_1:54919733-54919752 Msa0556660:intron 35.0%
GTATCAAAATTCCGGTTGAT+TGG + chr4_1:54919741-54919760 Msa0556660:intron 35.0%
GAATTAAAAGGCCAATCAAC+CGG - chr4_1:54919755-54919774 None:intergenic 35.0%
CAACTTCAAAGGCAGAATTA+TGG - chr4_1:54920023-54920042 None:intergenic 35.0%
AGCACAAAAGAGAAGAAGAA+AGG + chr4_1:54920143-54920162 Msa0556660:CDS 35.0%
! AAAGAGAAGAAGAAAGGTGT+AGG + chr4_1:54920149-54920168 Msa0556660:CDS 35.0%
!!! AAGAGTTTTAGAGCTCTGAA+AGG + chr4_1:54920841-54920860 Msa0556660:CDS 35.0%
!!! TTTTAGAGCTCTGAAAGGTT+TGG + chr4_1:54920846-54920865 Msa0556660:CDS 35.0%
AATCCAGATGTTAGAAAACC+AGG + chr4_1:54920978-54920997 Msa0556660:CDS 35.0%
!! ATTTTTGTAAAGTCTGAGGC+AGG + chr4_1:54921218-54921237 Msa0556660:intron 35.0%
TGATAGCTTACTGACAAAAG+AGG + chr4_1:54921259-54921278 Msa0556660:CDS 35.0%
CATCAAAAGAGAGAGATCAA+TGG + chr4_1:54921319-54921338 Msa0556660:CDS 35.0%
ATAAAAAGTCTAGGCTGTGT+TGG - chr4_1:54921372-54921391 None:intergenic 35.0%
! TCTCCTTGTTTCACAAGTTT+CGG + chr4_1:54921487-54921506 Msa0556660:intron 35.0%
ATCAAACCCACAAGAAAAAC+AGG + chr4_1:54921734-54921753 Msa0556660:CDS 35.0%
GTGTGAATTGGAAATTCTTC+AGG - chr4_1:54921761-54921780 None:intergenic 35.0%
! TTTTGTTCCGAATATGGTCT+TGG - chr4_1:54921786-54921805 None:intergenic 35.0%
! CTTGTCTTTTGTTCCGAATA+TGG - chr4_1:54921792-54921811 None:intergenic 35.0%
TCCATGTTATCAAAGGCAAA+AGG - chr4_1:54921843-54921862 None:intergenic 35.0%
TGGTGTATCCATGTTATCAA+AGG - chr4_1:54921850-54921869 None:intergenic 35.0%
!!! GATCTTGTTGATTTTGGAGT+TGG - chr4_1:54921870-54921889 None:intergenic 35.0%
!!! GTTCTAGATGGTTTTGAAGA+TGG - chr4_1:54921903-54921922 None:intergenic 35.0%
!! TTTCCTTGTGGAGTTCTAAA+TGG - chr4_1:54921930-54921949 None:intergenic 35.0%
GTCAAAATATTCAAGGCCAA+GGG + chr4_1:54921965-54921984 Msa0556660:CDS 35.0%
TCAAAATATTCAAGGCCAAG+GGG + chr4_1:54921966-54921985 Msa0556660:CDS 35.0%
AATCCAAGAGAAAGATTTGG+CGG + chr4_1:54922119-54922138 Msa0556660:CDS 35.0%
TTTCCTTTGTCACAAGGAAT+AGG + chr4_1:54922197-54922216 Msa0556660:CDS 35.0%
TTCCTTTGTCACAAGGAATA+GGG + chr4_1:54922198-54922217 Msa0556660:CDS 35.0%
AAGGAATAGGGTCATTCAAA+TGG + chr4_1:54922210-54922229 Msa0556660:CDS 35.0%
GGGTCATTCAAATGGAATAA+AGG + chr4_1:54922218-54922237 Msa0556660:CDS 35.0%
TCAAGTGACTGGTATTTATC+TGG - chr4_1:54922290-54922309 None:intergenic 35.0%
TACCAGTCACTTGAATCTAT+TGG + chr4_1:54922296-54922315 Msa0556660:CDS 35.0%
TTCCAATAGATTCAAGTGAC+TGG - chr4_1:54922301-54922320 None:intergenic 35.0%
ATCTATTGGAAATGTGAGTG+TGG + chr4_1:54922310-54922329 Msa0556660:CDS 35.0%
ACTTCAATGGGAAGACTATG+TGG - chr4_1:54917926-54917945 None:intergenic 40.0%
! AAAGAAGGGTATGGTATGGT+TGG - chr4_1:54917980-54917999 None:intergenic 40.0%
! GAAGTATTATGTGGTACTGC+TGG + chr4_1:54918170-54918189 Msa0556660:five_prime_UTR 40.0%
AAGCTCTGTGACAACTAACA+AGG + chr4_1:54918328-54918347 Msa0556660:five_prime_UTR 40.0%
! TGAATCATGTTGTGTTGGCA+TGG + chr4_1:54918465-54918484 Msa0556660:intron 40.0%
!! CATGTGATGGATCCTTAGAT+TGG + chr4_1:54918792-54918811 Msa0556660:intron 40.0%
CACCTACCTCCAAATATATG+AGG - chr4_1:54919148-54919167 None:intergenic 40.0%
AAACAGGAATGCTACTGAGA+TGG + chr4_1:54919252-54919271 Msa0556660:exon 40.0%
AACAGGAATGCTACTGAGAT+GGG + chr4_1:54919253-54919272 Msa0556660:exon 40.0%
! GGTTTTTACACACCACTCTA+AGG + chr4_1:54919309-54919328 Msa0556660:CDS 40.0%
AAATTACCTTCCCCTTAGAG+TGG - chr4_1:54919324-54919343 None:intergenic 40.0%
TTTGTACGTTGTTCTCGTTG+TGG + chr4_1:54919400-54919419 Msa0556660:intron 40.0%
ACACATATCCCTCAAGAACA+TGG + chr4_1:54919487-54919506 Msa0556660:intron 40.0%
AAAGTCTCAGCTCAGAAAAC+AGG - chr4_1:54919565-54919584 None:intergenic 40.0%
AACGAGACTCTCAATGTGAT+TGG - chr4_1:54919590-54919609 None:intergenic 40.0%
!! GACTGTAATGGATAGACCTT+TGG + chr4_1:54919665-54919684 Msa0556660:intron 40.0%
AGGCAGAATTATGGAAACAC+CGG - chr4_1:54920014-54920033 None:intergenic 40.0%
GGTGTAGGAAAACTAAAGCA+TGG + chr4_1:54920164-54920183 Msa0556660:CDS 40.0%
GAATGTTCATCAACACAAGG+AGG + chr4_1:54920439-54920458 Msa0556660:CDS 40.0%
! TGGTTCTGTAAAGTTGGTTC+TGG - chr4_1:54920476-54920495 None:intergenic 40.0%
!! ACATGCTGGTTCTGTAAAGT+TGG - chr4_1:54920482-54920501 None:intergenic 40.0%
TTTACAGAACCAGCATGTCT+CGG + chr4_1:54920484-54920503 Msa0556660:CDS 40.0%
GTAAGGAGAACACCTCAAAA+AGG - chr4_1:54920589-54920608 None:intergenic 40.0%
GTACTTGCAATATATAGGCC+AGG + chr4_1:54920818-54920837 Msa0556660:intron 40.0%
! AAAGGTTTGGTAAGGCTTCA+AGG + chr4_1:54920859-54920878 Msa0556660:CDS 40.0%
TAAGAGGACAGAATGTGAAG+AGG + chr4_1:54920887-54920906 Msa0556660:CDS 40.0%
TAACAGCTGCATGTGTTTCA+TGG - chr4_1:54920926-54920945 None:intergenic 40.0%
TCCAGCTTCATTCTTGTACT+CGG - chr4_1:54921016-54921035 None:intergenic 40.0%
!! AATGAAGCTGGAAGTACCTT+GGG + chr4_1:54921024-54921043 Msa0556660:CDS 40.0%
AGGCAGGTAACAATGAAGAT+TGG + chr4_1:54921234-54921253 Msa0556660:CDS 40.0%
GGCAGGTAACAATGAAGATT+GGG + chr4_1:54921235-54921254 Msa0556660:CDS 40.0%
GGCATTTGCATATTCACATC+AGG + chr4_1:54921340-54921359 Msa0556660:CDS 40.0%
! CTCCTTGTTTCACAAGTTTC+GGG + chr4_1:54921488-54921507 Msa0556660:intron 40.0%
TTCCCGAAACTTGTGAAACA+AGG - chr4_1:54921493-54921512 None:intergenic 40.0%
!!! CGTTTGAGTTGATTTTGGAG+TGG - chr4_1:54921646-54921665 None:intergenic 40.0%
!!! ACAGGCGTTTGAGTTGATTT+TGG - chr4_1:54921651-54921670 None:intergenic 40.0%
! TTTTCTTGTGGGTTTGATGC+AGG - chr4_1:54921732-54921751 None:intergenic 40.0%
!! TCAGGACCTGTTTTTCTTGT+GGG - chr4_1:54921743-54921762 None:intergenic 40.0%
!! TTCAGGACCTGTTTTTCTTG+TGG - chr4_1:54921744-54921763 None:intergenic 40.0%
!! GCCTTTTGCCTTTGATAACA+TGG + chr4_1:54921839-54921858 Msa0556660:CDS 40.0%
!! CTAAATGGAGGAGTTCTAGA+TGG - chr4_1:54921915-54921934 None:intergenic 40.0%
GCGTGACGTCAAAATATTCA+AGG + chr4_1:54921958-54921977 Msa0556660:CDS 40.0%
CGTCAAAATATTCAAGGCCA+AGG + chr4_1:54921964-54921983 Msa0556660:CDS 40.0%
! ATGTAGTTTGGAACGGAGAA+CGG - chr4_1:54922056-54922075 None:intergenic 40.0%
ATTACTACTAGCGCGTACTT+TGG - chr4_1:54922102-54922121 None:intergenic 40.0%
GTCTCATTTCCTTTGTCACA+AGG + chr4_1:54922191-54922210 Msa0556660:CDS 40.0%
TGGTACTGCTGGAAAGAAGA+AGG + chr4_1:54918181-54918200 Msa0556660:five_prime_UTR 45.0%
TACTGCTGGAAAGAAGAAGG+AGG + chr4_1:54918184-54918203 Msa0556660:five_prime_UTR 45.0%
TGCTACTGAGATGGGAAAGA+AGG + chr4_1:54919261-54919280 Msa0556660:exon 45.0%
GCTACTGAGATGGGAAAGAA+GGG + chr4_1:54919262-54919281 Msa0556660:exon 45.0%
CTACTGAGATGGGAAAGAAG+GGG + chr4_1:54919263-54919282 Msa0556660:exon 45.0%
GAAGAGGGGGATGAAAGAAT+TGG - chr4_1:54920195-54920214 None:intergenic 45.0%
! TAGGAGAAGCAACTCTAGGA+GGG - chr4_1:54920328-54920347 None:intergenic 45.0%
GCGGAATGTTCATCAACACA+AGG + chr4_1:54920436-54920455 Msa0556660:CDS 45.0%
TATAACCTCTGTAAGCAGCC+TGG - chr4_1:54920520-54920539 None:intergenic 45.0%
GGCTGCTTACAGAGGTTATA+TGG + chr4_1:54920520-54920539 Msa0556660:CDS 45.0%
!! CAGAGCTCTAAAACTCTTCC+TGG - chr4_1:54920839-54920858 None:intergenic 45.0%
!! GAGCTCTGAAAGGTTTGGTA+AGG + chr4_1:54920851-54920870 Msa0556660:CDS 45.0%
TTTGGTAAGGCTTCAAGGAG+TGG + chr4_1:54920864-54920883 Msa0556660:CDS 45.0%
!! GTGCCTGGTTTTCTAACATC+TGG - chr4_1:54920984-54921003 None:intergenic 45.0%
!! GAATGAAGCTGGAAGTACCT+TGG + chr4_1:54921023-54921042 Msa0556660:CDS 45.0%
!! ATGAAGCTGGAAGTACCTTG+GGG + chr4_1:54921025-54921044 Msa0556660:CDS 45.0%
!! ACCTTGGGGAAAAGTGCTTT+AGG + chr4_1:54921039-54921058 Msa0556660:CDS 45.0%
!! TCCTAAAGCACTTTTCCCCA+AGG - chr4_1:54921043-54921062 None:intergenic 45.0%
!! GGGAAAAGTGCTTTAGGACA+TGG + chr4_1:54921045-54921064 Msa0556660:CDS 45.0%
CAAAAGAGGAAGTAGAAGCG+AGG + chr4_1:54921273-54921292 Msa0556660:CDS 45.0%
! AAAGTCTAGGCTGTGTTGGT+GGG - chr4_1:54921368-54921387 None:intergenic 45.0%
AAAAGTCTAGGCTGTGTTGG+TGG - chr4_1:54921369-54921388 None:intergenic 45.0%
!! ATGGTCTTGGTGGTGTGAAT+TGG - chr4_1:54921773-54921792 None:intergenic 45.0%
CACACCACCAAGACCATATT+CGG + chr4_1:54921776-54921795 Msa0556660:CDS 45.0%
! TGTTCCGAATATGGTCTTGG+TGG - chr4_1:54921783-54921802 None:intergenic 45.0%
CAAAAGACAAGTCCAAGACC+TGG + chr4_1:54921801-54921820 Msa0556660:CDS 45.0%
!! CCTTGTGGAGTTCTAAATGG+AGG - chr4_1:54921927-54921946 None:intergenic 45.0%
! CCTCCATTTAGAACTCCACA+AGG + chr4_1:54921924-54921943 Msa0556660:CDS 45.0%
! ACGCTTGAAGTGTTTCCTTG+TGG - chr4_1:54921942-54921961 None:intergenic 45.0%
TGGTACGTCGAAAGGTGAAT+TGG - chr4_1:54922000-54922019 None:intergenic 45.0%
ACCTTTCGACGTACCATTGA+AGG + chr4_1:54922004-54922023 Msa0556660:CDS 45.0%
TCCTTCAATGGTACGTCGAA+AGG - chr4_1:54922008-54922027 None:intergenic 45.0%
AGACTGTCATCGTCCTTCAA+TGG - chr4_1:54922020-54922039 None:intergenic 45.0%
GTTCTCCGTTCCAAACTACA+TGG + chr4_1:54922055-54922074 Msa0556660:CDS 45.0%
TGGAGCCATGTAGTTTGGAA+CGG - chr4_1:54922063-54922082 None:intergenic 45.0%
ACAGTTGGAGCCATGTAGTT+TGG - chr4_1:54922068-54922087 None:intergenic 45.0%
CTCTTGGAATCAGTGCTTGT+TGG - chr4_1:54922167-54922186 None:intergenic 45.0%
!! CAACAAGCACTGATTCCAAG+AGG + chr4_1:54922165-54922184 Msa0556660:CDS 45.0%
AGGAAATGAGACTCTCCTCT+TGG - chr4_1:54922183-54922202 None:intergenic 45.0%
GACCCTATTCCTTGTGACAA+AGG - chr4_1:54922203-54922222 None:intergenic 45.0%
!!! TGTTTTTTTAATTATTATTA+TGG + chr4_1:54918434-54918453 Msa0556660:intron 5.0%
!!! TTATTTATTCAATTAATTTT+TGG + chr4_1:54918943-54918962 Msa0556660:intron 5.0%
!!! TATAAAAAATAAAAGTATTT+AGG + chr4_1:54920642-54920661 Msa0556660:intron 5.0%
!! TAATAAAAAAAAAACATAAT+AGG + chr4_1:54922531-54922550 Msa0556660:three_prime_UTR 5.0%
AAGCTCACCAGAACGATCGA+CGG - chr4_1:54919011-54919030 None:intergenic 50.0%
AGATGGGAAAGAAGGGGAGT+TGG + chr4_1:54919269-54919288 Msa0556660:exon 50.0%
! TACACACCACTCTAAGGGGA+AGG + chr4_1:54919315-54919334 Msa0556660:CDS 50.0%
! TGCTTGGTTCTCTGAAGAGG+GGG - chr4_1:54920208-54920227 None:intergenic 50.0%
! CTGCTTGGTTCTCTGAAGAG+GGG - chr4_1:54920209-54920228 None:intergenic 50.0%
! GCTGCTTGGTTCTCTGAAGA+GGG - chr4_1:54920210-54920229 None:intergenic 50.0%
! TGCTGCTTGGTTCTCTGAAG+AGG - chr4_1:54920211-54920230 None:intergenic 50.0%
CTAGGAGAAGCAACTCTAGG+AGG - chr4_1:54920329-54920348 None:intergenic 50.0%
CTCCTAGAGTTGCTTCTCCT+AGG + chr4_1:54920327-54920346 Msa0556660:CDS 50.0%
TCCTAAGCCTCCTTCTCCAA+GGG + chr4_1:54920358-54920377 Msa0556660:CDS 50.0%
TCCAAGGGATCCATCTCCAA+GGG + chr4_1:54920373-54920392 Msa0556660:CDS 50.0%
AAGATCCAGGCTGCTTACAG+AGG + chr4_1:54920512-54920531 Msa0556660:CDS 50.0%
AGGCTTCAAGGAGTGGTAAG+AGG + chr4_1:54920871-54920890 Msa0556660:CDS 50.0%
GCCGAGTACAAGAATGAAGC+TGG + chr4_1:54921012-54921031 Msa0556660:CDS 50.0%
AAGTAGAAGCGAGGTTGCAG+AGG + chr4_1:54921282-54921301 Msa0556660:CDS 50.0%
TATTCAAGGCCAAGGGGAGT+AGG + chr4_1:54921972-54921991 Msa0556660:CDS 50.0%
GAATTGGATCCTACTCCCCT+TGG - chr4_1:54921984-54922003 None:intergenic 50.0%
! TAGTTTGGAACGGAGAACGG+TGG - chr4_1:54922053-54922072 None:intergenic 50.0%
!! TTGGCCTTGGCAGAAACAGT+TGG - chr4_1:54922083-54922102 None:intergenic 50.0%
CCACCGCCAAATCTTTCTCT+TGG - chr4_1:54922125-54922144 None:intergenic 50.0%
CCAAGAGAAAGATTTGGCGG+TGG + chr4_1:54922122-54922141 Msa0556660:CDS 50.0%
AGATTTGGCGGTGGTAGTAG+TGG + chr4_1:54922131-54922150 Msa0556660:CDS 50.0%
AGGATTCTCATGGCTCTCAC+AGG + chr4_1:54922261-54922280 Msa0556660:CDS 50.0%
AGCAGTATCCTTGCCTGCAA+GGG + chr4_1:54922337-54922356 Msa0556660:CDS 50.0%
TCTTTCAACCCTTGCAGGCA+AGG - chr4_1:54922348-54922367 None:intergenic 50.0%
GGCTTTCTTTCAACCCTTGC+AGG - chr4_1:54922353-54922372 None:intergenic 50.0%
!!! AGGTGGCGTTTTTGGTCGCT+CGG - chr4_1:54920300-54920319 None:intergenic 55.0%
! GGGACGAAAGGTGGCGTTTT+TGG - chr4_1:54920308-54920327 None:intergenic 55.0%
! ACTCTAGGAGGGACGAAAGG+TGG - chr4_1:54920317-54920336 None:intergenic 55.0%
! GCAACTCTAGGAGGGACGAA+AGG - chr4_1:54920320-54920339 None:intergenic 55.0%
GGCCTAGGAGAAGCAACTCT+AGG - chr4_1:54920332-54920351 None:intergenic 55.0%
GAAGGAGGCTTAGGAGAAGG+AGG - chr4_1:54920353-54920372 None:intergenic 55.0%
GGAGAAGGAGGCTTAGGAGA+AGG - chr4_1:54920356-54920375 None:intergenic 55.0%
CTCCTAAGCCTCCTTCTCCA+AGG + chr4_1:54920357-54920376 Msa0556660:CDS 55.0%
TCCCTTGGAGAAGGAGGCTT+AGG - chr4_1:54920362-54920381 None:intergenic 55.0%
GATGGATCCCTTGGAGAAGG+AGG - chr4_1:54920368-54920387 None:intergenic 55.0%
GGAGATGGATCCCTTGGAGA+AGG - chr4_1:54920371-54920390 None:intergenic 55.0%
CTCCAAGGGATCCATCTCCA+AGG + chr4_1:54920372-54920391 Msa0556660:CDS 55.0%
AGAGGTAACTCGCGGAGAAG+CGG - chr4_1:54920399-54920418 None:intergenic 55.0%
GCTTTCGGAGAGGTAACTCG+CGG - chr4_1:54920407-54920426 None:intergenic 55.0%
GCGAGTTACCTCTCCGAAAG+CGG + chr4_1:54920406-54920425 Msa0556660:CDS 55.0%
!! TTCCGCGAAGATGCCGCTTT+CGG - chr4_1:54920422-54920441 None:intergenic 55.0%
TCTTAGTCGCCGAGACATGC+TGG - chr4_1:54920496-54920515 None:intergenic 55.0%
TGTCTCGGCGACTAAGATCC+AGG + chr4_1:54920499-54920518 Msa0556660:CDS 55.0%
! ACTCGGCTTGATATCGTGCC+TGG - chr4_1:54920999-54921018 None:intergenic 55.0%
AGAAGCGAGGTTGCAGAGGA+AGG + chr4_1:54921286-54921305 Msa0556660:CDS 55.0%
CTCGATCGCGTATCTGTCAC+AGG - chr4_1:54921669-54921688 None:intergenic 55.0%
GTGACAGATACGCGATCGAG+CGG + chr4_1:54921669-54921688 Msa0556660:CDS 55.0%
!! GATTCCCATGGTGGTGGAAC+TGG + chr4_1:54921691-54921710 Msa0556660:CDS 55.0%
CCAACCAGTTCCACCACCAT+GGG - chr4_1:54921698-54921717 None:intergenic 55.0%
TCCAACCAGTTCCACCACCA+TGG - chr4_1:54921699-54921718 None:intergenic 55.0%
TGAGAGCTTGAGCCAGGTCT+TGG - chr4_1:54921816-54921835 None:intergenic 55.0%
GACCTGGCTCAAGCTCTCAA+AGG + chr4_1:54921817-54921836 Msa0556660:CDS 55.0%
!! GGCTCCAACTGTTTCTGCCA+AGG + chr4_1:54922076-54922095 Msa0556660:CDS 55.0%
ACTAGCGCGTACTTTGGCCT+TGG - chr4_1:54922096-54922115 None:intergenic 55.0%
CAGCAGTATCCTTGCCTGCA+AGG + chr4_1:54922336-54922355 Msa0556660:CDS 55.0%
CAGAACGATCGACGGCAAGG+AGG - chr4_1:54919003-54919022 None:intergenic 60.0%
CTCCTTGCCGTCGATCGTTC+TGG + chr4_1:54919001-54919020 Msa0556660:five_prime_UTR 60.0%
CACCAGAACGATCGACGGCA+AGG - chr4_1:54919006-54919025 None:intergenic 60.0%
! TTTGGTCGCTCGGGAGGTGT+GGG - chr4_1:54920290-54920309 None:intergenic 60.0%
! TTTTGGTCGCTCGGGAGGTG+TGG - chr4_1:54920291-54920310 None:intergenic 60.0%
!!! GGTGGCGTTTTTGGTCGCTC+GGG - chr4_1:54920299-54920318 None:intergenic 60.0%
GGCTTAGGAGAAGGAGGCCT+AGG - chr4_1:54920347-54920366 None:intergenic 60.0%
GCCCTTGGAGATGGATCCCT+TGG - chr4_1:54920377-54920396 None:intergenic 60.0%
!! CGAAGATGCCGCTTTCGGAG+AGG - chr4_1:54920417-54920436 None:intergenic 60.0%
CTCCGAAAGCGGCATCTTCG+CGG + chr4_1:54920417-54920436 Msa0556660:CDS 60.0%
! GATCGAGCGGATTCCCATGG+TGG + chr4_1:54921682-54921701 Msa0556660:CDS 60.0%
!! CCCATGGTGGTGGAACTGGT+TGG + chr4_1:54921695-54921714 Msa0556660:CDS 60.0%
! GGCCTTTGAGAGCTTGAGCC+AGG - chr4_1:54921822-54921841 None:intergenic 60.0%
!!! GGCGTTTTTGGTCGCTCGGG+AGG - chr4_1:54920296-54920315 None:intergenic 65.0%
GGAGAAGCGGCCCTTGGAGA+TGG - chr4_1:54920386-54920405 None:intergenic 65.0%
! CGCGATCGAGCGGATTCCCA+TGG + chr4_1:54921679-54921698 Msa0556660:CDS 65.0%
! CGAGCGGATTCCCATGGTGG+TGG + chr4_1:54921685-54921704 Msa0556660:CDS 65.0%
ACTCGCGGAGAAGCGGCCCT+TGG - chr4_1:54920392-54920411 None:intergenic 70.0%
! GGTCGCTCGGGAGGTGTGGG+AGG - chr4_1:54920287-54920306 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 54917852 54922615 54917852 ID=Msa0556660;Name=Msa0556660
chr4_1 mRNA 54917852 54922615 54917852 ID=Msa0556660-mRNA-1;Parent=Msa0556660;Name=Msa0556660-mRNA-1;_AED=0.05;_eAED=0.05;_QI=568|1|1|1|0.66|0.85|7|224|534
chr4_1 exon 54917852 54918349 54917852 ID=Msa0556660-mRNA-1:exon:16281;Parent=Msa0556660-mRNA-1
chr4_1 exon 54918976 54919022 54918976 ID=Msa0556660-mRNA-1:exon:16282;Parent=Msa0556660-mRNA-1
chr4_1 exon 54919248 54919336 54919248 ID=Msa0556660-mRNA-1:exon:16283;Parent=Msa0556660-mRNA-1
chr4_1 exon 54920128 54920541 54920128 ID=Msa0556660-mRNA-1:exon:16284;Parent=Msa0556660-mRNA-1
chr4_1 exon 54920835 54921068 54920835 ID=Msa0556660-mRNA-1:exon:16285;Parent=Msa0556660-mRNA-1
chr4_1 exon 54921230 54921361 54921230 ID=Msa0556660-mRNA-1:exon:16286;Parent=Msa0556660-mRNA-1
chr4_1 exon 54921633 54922615 54921633 ID=Msa0556660-mRNA-1:exon:16287;Parent=Msa0556660-mRNA-1
chr4_1 five_prime_UTR 54917852 54918349 54917852 ID=Msa0556660-mRNA-1:five_prime_utr;Parent=Msa0556660-mRNA-1
chr4_1 five_prime_UTR 54918976 54919022 54918976 ID=Msa0556660-mRNA-1:five_prime_utr;Parent=Msa0556660-mRNA-1
chr4_1 five_prime_UTR 54919248 54919270 54919248 ID=Msa0556660-mRNA-1:five_prime_utr;Parent=Msa0556660-mRNA-1
chr4_1 CDS 54919271 54919336 54919271 ID=Msa0556660-mRNA-1:cds;Parent=Msa0556660-mRNA-1
chr4_1 CDS 54920128 54920541 54920128 ID=Msa0556660-mRNA-1:cds;Parent=Msa0556660-mRNA-1
chr4_1 CDS 54920835 54921068 54920835 ID=Msa0556660-mRNA-1:cds;Parent=Msa0556660-mRNA-1
chr4_1 CDS 54921230 54921361 54921230 ID=Msa0556660-mRNA-1:cds;Parent=Msa0556660-mRNA-1
chr4_1 CDS 54921633 54922391 54921633 ID=Msa0556660-mRNA-1:cds;Parent=Msa0556660-mRNA-1
chr4_1 three_prime_UTR 54922392 54922615 54922392 ID=Msa0556660-mRNA-1:three_prime_utr;Parent=Msa0556660-mRNA-1
Gene Sequence

>Msa0556660

ATGGGAAAGAAGGGGAGTTGGTTTTCAGCAATCAAAAGGGTTTTTACACACCACTCTAAGGGGAAGGATTCAGAAAACAAAAGCACAAAAGAGAAGAAGAAAGGTGTAGGAAAACTAAAGCATGGAGAGACCAATTCTTTCATCCCCCTCTTCAGAGAACCAAGCAGCATTGAGAAAATATTTGGGGACTTTGAAAGAGAACAACAAGTACTTGCAATTAGGCCTCCCACACCTCCCGAGCGACCAAAAACGCCACCTTTCGTCCCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCTCCTAAGCCTCCTTCTCCAAGGGATCCATCTCCAAGGGCCGCTTCTCCGCGAGTTACCTCTCCGAAAGCGGCATCTTCGCGGAATGTTCATCAACACAAGGAGGTTCGCAACAGACCAGAACCAACTTTACAGAACCAGCATGTCTCGGCGACTAAGATCCAGGCTGCTTACAGAGGTTATATGGCCAGGAAGAGTTTTAGAGCTCTGAAAGGTTTGGTAAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAGTTAATGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAGTCTCAGATTCAATCTCGAAGAATCCAGATGTTAGAAAACCAGGCACGATATCAAGCCGAGTACAAGAATGAAGCTGGAAGTACCTTGGGGAAAAGTGCTTTAGGACATGGTTCTGAGGCAGGTAACAATGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGAAGCGAGGTTGCAGAGGAAGGTTGAAGCAATCATCAAAAGAGAGAGATCAATGGCATTTGCATATTCACATCAGTTATGGAAGGCCACTCCAAAATCAACTCAAACGCCTGTGACAGATACGCGATCGAGCGGATTCCCATGGTGGTGGAACTGGTTGGAAAGACAATTACCTGCATCAAACCCACAAGAAAAACAGGTCCTGAAGAATTTCCAATTCACACCACCAAGACCATATTCGGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCTCTCAAAGGCCTTTTGCCTTTGATAACATGGATACACCAACTCCAAAATCAACAAGATCGACTATATTTCCATCTTCAAAACCATCTAGAACTCCTCCATTTAGAACTCCACAAGGAAACACTTCAAGCGTGACGTCAAAATATTCAAGGCCAAGGGGAGTAGGATCCAATTCACCTTTCGACGTACCATTGAAGGACGATGACAGTCTCACAAGCTGTCCACCGTTCTCCGTTCCAAACTACATGGCTCCAACTGTTTCTGCCAAGGCCAAAGTACGCGCTAGTAGTAATCCAAGAGAAAGATTTGGCGGTGGTAGTAGTGGCTGTGCAACTCCAACAAGCACTGATTCCAAGAGGAGAGTCTCATTTCCTTTGTCACAAGGAATAGGGTCATTCAAATGGAATAAAGGGTCAATGTTCTCTAGAAATAAGGATTCTCATGGCTCTCACAGGACTCCAGATAAATACCAGTCACTTGAATCTATTGGAAATGTGAGTGTGGATTCAGCAGTATCCTTGCCTGCAAGGGTTGAAAGAAAGCCTTTTACAAGATTTGTGTGA
Protein sequence

>Msa0556660

MGKKGSWFSAIKRVFTHHSKGKDSENKSTKEKKKGVGKLKHGETNSFIPLFREPSSIEKIFGDFEREQQVLAIRPPTPPERPKTPPFVPPRVASPRPPSPKPPSPRDPSPRAASPRVTSPKAASSRNVHQHKEVRNRPEPTLQNQHVSATKIQAAYRGYMARKSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEYKNEAGSTLGKSALGHGSEAGNNEDWDDSLLTKEEVEARLQRKVEAIIKRERSMAFAYSHQLWKATPKSTQTPVTDTRSSGFPWWWNWLERQLPASNPQEKQVLKNFQFTPPRPYSEQKTSPRPGSSSQRPFAFDNMDTPTPKSTRSTIFPSSKPSRTPPFRTPQGNTSSVTSKYSRPRGVGSNSPFDVPLKDDDSLTSCPPFSVPNYMAPTVSAKAKVRASSNPRERFGGGSSGCATPTSTDSKRRVSFPLSQGIGSFKWNKGSMFSRNKDSHGSHRTPDKYQSLESIGNVSVDSAVSLPARVERKPFTRFV*