Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621940 | GAU11476.1 | 87.461 | 319 | 39 | 1 | 1 | 319 | 1 | 318 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621940 | sp|I6YGS0|EPHA_MYCTU | 36.308 | 325 | 189 | 6 | 1 | 316 | 1 | 316 | 5.62e-62 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0621940 | Msa0622010 | 0.995975 | 5.771501e-222 | -8.615850e-47 |
| Msa0621940 | Msa1039480 | 0.890792 | 7.147026e-74 | -8.615850e-47 |
| Msa0621940 | Msa1085590 | 0.869514 | 2.924944e-66 | -8.615850e-47 |
| Msa0621940 | Msa1305040 | 0.999291 | 4.520940e-301 | -8.615850e-47 |
| Msa0621940 | Msa1433300 | 0.998997 | 2.761544e-285 | -8.615850e-47 |
| Msa0575990 | Msa0621940 | 0.832226 | 1.066442e-55 | -8.615850e-47 |
| Msa0576100 | Msa0621940 | 0.827495 | 1.516211e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621940 | MtrunA17_Chr7g0272481 | 84.639 | 319 | 49 | 0 | 1 | 319 | 1 | 319 | 0.0 | 568 |
| Msa0621940 | MtrunA17_Chr7g0272531 | 82.759 | 319 | 55 | 0 | 1 | 319 | 31 | 349 | 0.0 | 567 |
| Msa0621940 | MtrunA17_Chr7g0272501 | 82.445 | 319 | 56 | 0 | 1 | 319 | 1 | 319 | 0.0 | 563 |
| Msa0621940 | MtrunA17_Chr7g0272181 | 81.818 | 319 | 58 | 0 | 1 | 319 | 1 | 319 | 0.0 | 559 |
| Msa0621940 | MtrunA17_Chr7g0272171 | 81.191 | 319 | 60 | 0 | 1 | 319 | 1 | 319 | 0.0 | 553 |
| Msa0621940 | MtrunA17_Chr7g0272431 | 72.897 | 321 | 83 | 2 | 1 | 319 | 1 | 319 | 4.28e-179 | 497 |
| Msa0621940 | MtrunA17_Chr7g0272441 | 73.832 | 321 | 80 | 2 | 1 | 319 | 1 | 319 | 1.85e-177 | 493 |
| Msa0621940 | MtrunA17_Chr4g0000111 | 71.207 | 323 | 88 | 3 | 1 | 319 | 1 | 322 | 7.57e-175 | 487 |
| Msa0621940 | MtrunA17_Chr7g0272451 | 71.160 | 319 | 89 | 2 | 1 | 319 | 1 | 316 | 2.56e-174 | 485 |
| Msa0621940 | MtrunA17_Chr4g0067581 | 61.059 | 321 | 121 | 3 | 1 | 319 | 37 | 355 | 1.94e-142 | 406 |
| Msa0621940 | MtrunA17_Chr7g0269471 | 56.740 | 319 | 136 | 2 | 1 | 319 | 1 | 317 | 3.02e-134 | 384 |
| Msa0621940 | MtrunA17_Chr8g0372491 | 46.708 | 319 | 166 | 3 | 1 | 319 | 3 | 317 | 1.24e-103 | 306 |
| Msa0621940 | MtrunA17_Chr7g0272471 | 82.051 | 156 | 28 | 0 | 1 | 156 | 1 | 156 | 9.05e-96 | 280 |
| Msa0621940 | MtrunA17_Chr1g0192291 | 73.585 | 159 | 38 | 2 | 1 | 156 | 1 | 158 | 3.10e-83 | 249 |
| Msa0621940 | MtrunA17_Chr2g0324141 | 37.383 | 321 | 187 | 7 | 1 | 318 | 1 | 310 | 1.14e-66 | 211 |
| Msa0621940 | MtrunA17_Chr2g0324161 | 36.760 | 321 | 189 | 7 | 1 | 318 | 1 | 310 | 3.80e-64 | 205 |
| Msa0621940 | MtrunA17_Chr4g0047701 | 36.137 | 321 | 190 | 6 | 1 | 318 | 1 | 309 | 6.95e-62 | 199 |
| Msa0621940 | MtrunA17_Chr4g0047681 | 34.579 | 321 | 195 | 6 | 1 | 318 | 1 | 309 | 2.08e-59 | 192 |
| Msa0621940 | MtrunA17_Chr7g0272391 | 69.231 | 117 | 14 | 2 | 161 | 276 | 1 | 96 | 2.65e-45 | 150 |
| Msa0621940 | MtrunA17_Chr7g0272461 | 59.813 | 107 | 39 | 2 | 177 | 281 | 1 | 105 | 1.22e-36 | 128 |
| Msa0621940 | MtrunA17_Chr3g0086531 | 72.603 | 73 | 20 | 0 | 80 | 152 | 1 | 73 | 1.58e-33 | 119 |
| Msa0621940 | MtrunA17_Chr7g0272511 | 76.316 | 38 | 9 | 0 | 278 | 315 | 29 | 66 | 8.87e-13 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621940 | AT3G05600.1 | 61.111 | 324 | 121 | 4 | 1 | 319 | 1 | 324 | 5.20e-149 | 422 |
| Msa0621940 | AT4G02340.1 | 56.386 | 321 | 133 | 4 | 1 | 319 | 1 | 316 | 3.32e-134 | 384 |
| Msa0621940 | AT4G15960.1 | 54.154 | 325 | 142 | 3 | 1 | 319 | 51 | 374 | 1.37e-125 | 364 |
| Msa0621940 | AT2G26740.1 | 59.317 | 322 | 124 | 4 | 4 | 319 | 1 | 321 | 8.38e-125 | 360 |
| Msa0621940 | AT2G26750.1 | 57.632 | 321 | 130 | 4 | 4 | 319 | 1 | 320 | 1.32e-119 | 347 |
| Msa0621940 | AT3G05600.2 | 61.728 | 243 | 88 | 4 | 1 | 238 | 1 | 243 | 3.92e-109 | 317 |
| Msa0621940 | AT4G15955.3 | 51.077 | 325 | 123 | 5 | 5 | 319 | 6 | 304 | 7.53e-106 | 311 |
| Msa0621940 | AT3G51000.1 | 44.954 | 327 | 159 | 6 | 3 | 319 | 4 | 319 | 1.33e-97 | 291 |
| Msa0621940 | AT4G15955.2 | 57.471 | 174 | 64 | 2 | 5 | 168 | 6 | 179 | 1.34e-67 | 209 |
| Msa0621940 | AT4G15955.1 | 57.576 | 165 | 60 | 2 | 5 | 159 | 6 | 170 | 1.51e-63 | 199 |
Find 96 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGTAGGCTTTGACTCTTTC+AGG | 0.145162 | 4_2:-74256047 | None:intergenic |
| CTACTATATCTGCAGATTTC+AGG | 0.187669 | 4_2:+74256148 | Msa0621940:CDS |
| CATGATTGGGGTGCCTTAAT+TGG | 0.213822 | 4_2:+74256002 | Msa0621940:CDS |
| CCAGTAGTCTTGTTCCTTCA+TGG | 0.244564 | 4_2:+74255777 | Msa0621940:CDS |
| TCTTTCTTGTTGCTCATGAT+TGG | 0.261993 | 4_2:+74255988 | Msa0621940:CDS |
| GAGGAAGTGATTGTACAAAA+AGG | 0.277197 | 4_2:+74256783 | Msa0621940:CDS |
| GTCATAGGAACCAGGTAAAA+TGG | 0.282976 | 4_2:+74256292 | Msa0621940:intron |
| CTTTCTTGTTGCTCATGATT+GGG | 0.285427 | 4_2:+74255989 | Msa0621940:CDS |
| AAAATGCATCTTGCAGAAAA+AGG | 0.286834 | 4_2:+74255744 | Msa0621940:CDS |
| ATAGATTATACCATCTTATA+TGG | 0.288780 | 4_2:+74257039 | Msa0621940:three_prime_UTR |
| TTAACATCTTTGTCACGTTT+AGG | 0.290784 | 4_2:-74256889 | None:intergenic |
| AGCCAAGAGGGCAAGGTGTC+AGG | 0.303963 | 4_2:-74256434 | None:intergenic |
| CCCCTGACACCTTGCCCTCT+TGG | 0.306808 | 4_2:+74256432 | Msa0621940:CDS |
| CGCCATGAGTACCAGAGTTC+GGG | 0.318900 | 4_2:-74255804 | None:intergenic |
| TAACATCTTTGTCACGTTTA+GGG | 0.321271 | 4_2:-74256888 | None:intergenic |
| ACAAAGATACCAACCAATTA+AGG | 0.323697 | 4_2:-74256015 | None:intergenic |
| GTCTCTAAATTTGACAAAAC+AGG | 0.325042 | 4_2:+74256482 | Msa0621940:CDS |
| ATCCTCACAACACGGAAAAT+TGG | 0.340437 | 4_2:+74256359 | Msa0621940:CDS |
| GGCAAGGTGTCAGGGGTATC+CGG | 0.344243 | 4_2:-74256425 | None:intergenic |
| TACGTAGAAACCCAAATAAA+AGG | 0.378449 | 4_2:+74256090 | Msa0621940:CDS |
| GCTCCCGATCTCCGTGGCTT+TGG | 0.388680 | 4_2:+74255870 | Msa0621940:CDS |
| GTGCCAGTGAAATTCATTAC+AGG | 0.390811 | 4_2:+74256678 | Msa0621940:CDS |
| TTTGACAAAACAGGCTTCAC+TGG | 0.391236 | 4_2:+74256491 | Msa0621940:CDS |
| AGGGCACCGATTAGAACTTC+AGG | 0.393206 | 4_2:-74256869 | None:intergenic |
| ACAATCACTTCCTCTAAATT+CGG | 0.394533 | 4_2:-74256774 | None:intergenic |
| CTTCTTTGTTTGCAGACTCT+GGG | 0.399025 | 4_2:+74256620 | Msa0621940:intron |
| TACACAATCTTCCACTTAGT+TGG | 0.410078 | 4_2:+74255924 | Msa0621940:CDS |
| GCGCCATGAGTACCAGAGTT+CGG | 0.415510 | 4_2:-74255805 | None:intergenic |
| CTGCTTCTTGATTATTAAAG+TGG | 0.416796 | 4_2:-74256812 | None:intergenic |
| GAATCCAGTTCCGTACTTGC+CGG | 0.427409 | 4_2:-74256399 | None:intergenic |
| ACTTAAAATCATCAAGGTCT+TGG | 0.445786 | 4_2:-74257012 | None:intergenic |
| GTCTCCAAAGCCACGGAGAT+CGG | 0.447397 | 4_2:-74255874 | None:intergenic |
| CATTACAGGTGAGCTAGATA+TGG | 0.453391 | 4_2:+74256692 | Msa0621940:CDS |
| TCTCCAAAGCCACGGAGATC+GGG | 0.455811 | 4_2:-74255873 | None:intergenic |
| GGAAGATGTGCCGAATTTAG+AGG | 0.457691 | 4_2:+74256764 | Msa0621940:CDS |
| GGGAACTGAGGGCCACAATC+TGG | 0.459581 | 4_2:-74255830 | None:intergenic |
| TACTTGCCGGTGGGAAGTAT+TGG | 0.475789 | 4_2:-74256386 | None:intergenic |
| CCCACCGGCAAGTACGGAAC+TGG | 0.478584 | 4_2:+74256395 | Msa0621940:CDS |
| GCCAAGAGGGCAAGGTGTCA+GGG | 0.488708 | 4_2:-74256433 | None:intergenic |
| GATCACTTGCGTGATGTGTA+TGG | 0.490923 | 4_2:+74256119 | Msa0621940:CDS |
| TTCATGGCTTCCCCGAACTC+TGG | 0.493938 | 4_2:+74255793 | Msa0621940:CDS |
| GCAAGGTGTCAGGGGTATCC+GGG | 0.499424 | 4_2:-74256424 | None:intergenic |
| ATTCATCCTGAAGTTCTAAT+CGG | 0.501509 | 4_2:+74256863 | Msa0621940:exon |
| TTTCTTGTTGCTCATGATTG+GGG | 0.508757 | 4_2:+74255990 | Msa0621940:CDS |
| ATTTGGGTTTCTACGTAGGA+AGG | 0.512776 | 4_2:-74256084 | None:intergenic |
| TCCCCGAACTCTGGTACTCA+TGG | 0.513767 | 4_2:+74255802 | Msa0621940:CDS |
| TATACATGGAGGAGGAATGA+AGG | 0.514026 | 4_2:+74256743 | Msa0621940:CDS |
| CACAGAACAGTGGAAGTGAA+TGG | 0.515742 | 4_2:+74255717 | Msa0621940:CDS |
| GCCACGGAGATCGGGAGCTA+CGG | 0.522060 | 4_2:-74255865 | None:intergenic |
| ATTGGGGTGCCTTAATTGGT+TGG | 0.526960 | 4_2:+74256006 | Msa0621940:CDS |
| ATACTTCCCACCGGCAAGTA+CGG | 0.526961 | 4_2:+74256389 | Msa0621940:CDS |
| TTCTGTAAGCCAAGAGGGCA+AGG | 0.536914 | 4_2:-74256441 | None:intergenic |
| CTCATGGCGCCACCAGATTG+TGG | 0.538156 | 4_2:+74255818 | Msa0621940:CDS |
| CAACGATATCACCAACTAAG+TGG | 0.540284 | 4_2:-74255935 | None:intergenic |
| GAGCTACGGCGTGGTAGCCG+AGG | 0.552775 | 4_2:-74255851 | None:intergenic |
| TTGCCGGTGGGAAGTATTGG+AGG | 0.553767 | 4_2:-74256383 | None:intergenic |
| ATGCAAACTTAAAATCATCA+AGG | 0.555240 | 4_2:-74257018 | None:intergenic |
| GTGTAGTTGCTTATTGAAGT+GGG | 0.557721 | 4_2:-74255906 | None:intergenic |
| ACTAGTACAACCATATAAGA+TGG | 0.557805 | 4_2:-74257049 | None:intergenic |
| TCACCTGTAATGAATTTCAC+TGG | 0.565006 | 4_2:-74256681 | None:intergenic |
| AGAGTTCGGGGAAGCCATGA+AGG | 0.565421 | 4_2:-74255791 | None:intergenic |
| TCTGGGAGCTCACAACTCCA+TGG | 0.565482 | 4_2:+74256637 | Msa0621940:CDS |
| TCCAGTTCCGTACTTGCCGG+TGG | 0.566439 | 4_2:-74256396 | None:intergenic |
| CCATGAAGGAACAAGACTAC+TGG | 0.567142 | 4_2:-74255777 | None:intergenic |
| TGATCCATGTCATAGGAACC+AGG | 0.570861 | 4_2:+74256284 | Msa0621940:intron |
| TTTGGGTTTCTACGTAGGAA+GGG | 0.576884 | 4_2:-74256083 | None:intergenic |
| TCGTCTTCTGTAAGCCAAGA+GGG | 0.589343 | 4_2:-74256446 | None:intergenic |
| GAAGCTGAGATTGCTGAAGT+TGG | 0.590696 | 4_2:+74256314 | Msa0621940:CDS |
| GGCATGAAGGAGTATATACA+TGG | 0.590893 | 4_2:+74256729 | Msa0621940:CDS |
| TGTGTAGTTGCTTATTGAAG+TGG | 0.591667 | 4_2:-74255907 | None:intergenic |
| GAGCTCACAACTCCATGGAC+CGG | 0.592214 | 4_2:+74256642 | Msa0621940:CDS |
| AAGGAGTATATACATGGAGG+AGG | 0.594079 | 4_2:+74256735 | Msa0621940:CDS |
| GACAAAACAGGCTTCACTGG+AGG | 0.595419 | 4_2:+74256494 | Msa0621940:CDS |
| AGCTACGGCGTGGTAGCCGA+GGG | 0.595559 | 4_2:-74255850 | None:intergenic |
| GATATGGTGTACACTTCGCT+AGG | 0.598016 | 4_2:+74256708 | Msa0621940:CDS |
| ATTTAGAGACAAAGTAAGCA+AGG | 0.606314 | 4_2:-74256469 | None:intergenic |
| CGTGGTAGCCGAGGGAACTG+AGG | 0.611603 | 4_2:-74255842 | None:intergenic |
| GTGGTAGCCGAGGGAACTGA+GGG | 0.612520 | 4_2:-74255841 | None:intergenic |
| ATTGTGGCCCTCAGTTCCCT+CGG | 0.614475 | 4_2:+74255834 | Msa0621940:CDS |
| AACTGAGGGCCACAATCTGG+TGG | 0.616466 | 4_2:-74255827 | None:intergenic |
| CCAGTTCCGTACTTGCCGGT+GGG | 0.621230 | 4_2:-74256395 | None:intergenic |
| GTACACTTCGCTAGGCATGA+AGG | 0.627184 | 4_2:+74256716 | Msa0621940:CDS |
| CCAAGAGGGCAAGGTGTCAG+GGG | 0.630193 | 4_2:-74256432 | None:intergenic |
| CATCACTGTCTCCAAAGCCA+CGG | 0.638680 | 4_2:-74255881 | None:intergenic |
| ATGGACCGGAGTGAAAACCT+TGG | 0.641351 | 4_2:+74256656 | Msa0621940:CDS |
| GGTCCTCCAATACTTCCCAC+CGG | 0.646331 | 4_2:+74256380 | Msa0621940:CDS |
| GTTGCTCTCATAGACTCACT+TGG | 0.649822 | 4_2:+74255954 | Msa0621940:CDS |
| AATGAATTTCACTGGCACCA+AGG | 0.651882 | 4_2:-74256673 | None:intergenic |
| GTCGTCTTCTGTAAGCCAAG+AGG | 0.663533 | 4_2:-74256447 | None:intergenic |
| GGAGATCGGGAGCTACGGCG+TGG | 0.695350 | 4_2:-74255860 | None:intergenic |
| GCCATGAGTACCAGAGTTCG+GGG | 0.700987 | 4_2:-74255803 | None:intergenic |
| GTACGGAACTGGATTCAACC+CGG | 0.702183 | 4_2:+74256406 | Msa0621940:CDS |
| AGGCATAGAACACAGAACAG+TGG | 0.709768 | 4_2:+74255707 | Msa0621940:CDS |
| GCCGTAGCTCCCGATCTCCG+TGG | 0.712868 | 4_2:+74255864 | Msa0621940:CDS |
| GGGACTACTAAGACAAACGT+AGG | 0.722492 | 4_2:-74256063 | None:intergenic |
| ATGAAGGAGTATATACATGG+AGG | 0.728089 | 4_2:+74256732 | Msa0621940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTACTTTAATGAATGAT+TGG | + | chr4_2:74256243-74256262 | Msa0621940:intron | 15.0% |
| !!! | GATAATCAAATTTTCATTTA+GGG | + | chr4_2:74256572-74256591 | Msa0621940:intron | 15.0% |
| !!! | ATTTTACTTTAATGAATGAT+TGG | + | chr4_2:74256243-74256262 | Msa0621940:intron | 15.0% |
| !!! | GATAATCAAATTTTCATTTA+GGG | + | chr4_2:74256572-74256591 | Msa0621940:intron | 15.0% |
| !!! | TTTGAAATATGATCATATAG+AGG | - | chr4_2:74256190-74256209 | None:intergenic | 20.0% |
| !!! | GGATAATCAAATTTTCATTT+AGG | + | chr4_2:74256571-74256590 | Msa0621940:intron | 20.0% |
| !! | ATAGATTATACCATCTTATA+TGG | + | chr4_2:74257039-74257058 | Msa0621940:three_prime_UTR | 20.0% |
| !!! | TTTGAAATATGATCATATAG+AGG | - | chr4_2:74256190-74256209 | None:intergenic | 20.0% |
| !!! | GGATAATCAAATTTTCATTT+AGG | + | chr4_2:74256571-74256590 | Msa0621940:intron | 20.0% |
| !! | ATAGATTATACCATCTTATA+TGG | + | chr4_2:74257039-74257058 | Msa0621940:three_prime_UTR | 20.0% |
| !!! | TCCATCTCTTTTTTTTCTTA+CGG | - | chr4_2:74255687-74255706 | None:intergenic | 25.0% |
| ! | TAAGAAAAAAAAGAGATGGA+AGG | + | chr4_2:74255687-74255706 | Msa0621940:exon | 25.0% |
| !!! | GATCTATGATCCTTTTATTT+GGG | - | chr4_2:74256103-74256122 | None:intergenic | 25.0% |
| !! | TGATCTATGATCCTTTTATT+TGG | - | chr4_2:74256104-74256123 | None:intergenic | 25.0% |
| ! | ATGAAAATTTGATTATCCCA+AGG | - | chr4_2:74256569-74256588 | None:intergenic | 25.0% |
| ! | ATGCAAACTTAAAATCATCA+AGG | - | chr4_2:74257021-74257040 | None:intergenic | 25.0% |
| !!! | TCCATCTCTTTTTTTTCTTA+CGG | - | chr4_2:74255687-74255706 | None:intergenic | 25.0% |
| ! | TAAGAAAAAAAAGAGATGGA+AGG | + | chr4_2:74255687-74255706 | Msa0621940:exon | 25.0% |
| !!! | GATCTATGATCCTTTTATTT+GGG | - | chr4_2:74256103-74256122 | None:intergenic | 25.0% |
| !! | TGATCTATGATCCTTTTATT+TGG | - | chr4_2:74256104-74256123 | None:intergenic | 25.0% |
| ! | ATGAAAATTTGATTATCCCA+AGG | - | chr4_2:74256569-74256588 | None:intergenic | 25.0% |
| ! | ATGCAAACTTAAAATCATCA+AGG | - | chr4_2:74257021-74257040 | None:intergenic | 25.0% |
| TCCGTAAGAAAAAAAAGAGA+TGG | + | chr4_2:74255683-74255702 | Msa0621940:exon | 30.0% | |
| AAAATGCATCTTGCAGAAAA+AGG | + | chr4_2:74255744-74255763 | Msa0621940:CDS | 30.0% | |
| ACAAAGATACCAACCAATTA+AGG | - | chr4_2:74256018-74256037 | None:intergenic | 30.0% | |
| !! | TTTTATTTGGGTTTCTACGT+AGG | - | chr4_2:74256091-74256110 | None:intergenic | 30.0% |
| TACGTAGAAACCCAAATAAA+AGG | + | chr4_2:74256090-74256109 | Msa0621940:CDS | 30.0% | |
| AAATATGATCATATAGAGGC+TGG | - | chr4_2:74256186-74256205 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTGATCCATGTCAT+AGG | + | chr4_2:74256277-74256296 | Msa0621940:intron | 30.0% |
| !! | GATATTTTTCAGCACATAAG+CGG | - | chr4_2:74256342-74256361 | None:intergenic | 30.0% |
| TGAAAAATATCCTCACAACA+CGG | + | chr4_2:74256351-74256370 | Msa0621940:CDS | 30.0% | |
| ATTTAGAGACAAAGTAAGCA+AGG | - | chr4_2:74256472-74256491 | None:intergenic | 30.0% | |
| GTCTCTAAATTTGACAAAAC+AGG | + | chr4_2:74256482-74256501 | Msa0621940:CDS | 30.0% | |
| ACAATCACTTCCTCTAAATT+CGG | - | chr4_2:74256777-74256796 | None:intergenic | 30.0% | |
| CTGCTTCTTGATTATTAAAG+TGG | - | chr4_2:74256815-74256834 | None:intergenic | 30.0% | |
| ! | ATTCATCCTGAAGTTCTAAT+CGG | + | chr4_2:74256863-74256882 | Msa0621940:exon | 30.0% |
| TAACATCTTTGTCACGTTTA+GGG | - | chr4_2:74256891-74256910 | None:intergenic | 30.0% | |
| TTAACATCTTTGTCACGTTT+AGG | - | chr4_2:74256892-74256911 | None:intergenic | 30.0% | |
| ACTTAAAATCATCAAGGTCT+TGG | - | chr4_2:74257015-74257034 | None:intergenic | 30.0% | |
| ACTAGTACAACCATATAAGA+TGG | - | chr4_2:74257052-74257071 | None:intergenic | 30.0% | |
| TCCGTAAGAAAAAAAAGAGA+TGG | + | chr4_2:74255683-74255702 | Msa0621940:exon | 30.0% | |
| AAAATGCATCTTGCAGAAAA+AGG | + | chr4_2:74255744-74255763 | Msa0621940:CDS | 30.0% | |
| ACAAAGATACCAACCAATTA+AGG | - | chr4_2:74256018-74256037 | None:intergenic | 30.0% | |
| !! | TTTTATTTGGGTTTCTACGT+AGG | - | chr4_2:74256091-74256110 | None:intergenic | 30.0% |
| TACGTAGAAACCCAAATAAA+AGG | + | chr4_2:74256090-74256109 | Msa0621940:CDS | 30.0% | |
| AAATATGATCATATAGAGGC+TGG | - | chr4_2:74256186-74256205 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTGATCCATGTCAT+AGG | + | chr4_2:74256277-74256296 | Msa0621940:intron | 30.0% |
| !! | GATATTTTTCAGCACATAAG+CGG | - | chr4_2:74256342-74256361 | None:intergenic | 30.0% |
| TGAAAAATATCCTCACAACA+CGG | + | chr4_2:74256351-74256370 | Msa0621940:CDS | 30.0% | |
| ATTTAGAGACAAAGTAAGCA+AGG | - | chr4_2:74256472-74256491 | None:intergenic | 30.0% | |
| GTCTCTAAATTTGACAAAAC+AGG | + | chr4_2:74256482-74256501 | Msa0621940:CDS | 30.0% | |
| ACAATCACTTCCTCTAAATT+CGG | - | chr4_2:74256777-74256796 | None:intergenic | 30.0% | |
| CTGCTTCTTGATTATTAAAG+TGG | - | chr4_2:74256815-74256834 | None:intergenic | 30.0% | |
| ! | ATTCATCCTGAAGTTCTAAT+CGG | + | chr4_2:74256863-74256882 | Msa0621940:exon | 30.0% |
| TAACATCTTTGTCACGTTTA+GGG | - | chr4_2:74256891-74256910 | None:intergenic | 30.0% | |
| TTAACATCTTTGTCACGTTT+AGG | - | chr4_2:74256892-74256911 | None:intergenic | 30.0% | |
| ACTTAAAATCATCAAGGTCT+TGG | - | chr4_2:74257015-74257034 | None:intergenic | 30.0% | |
| ACTAGTACAACCATATAAGA+TGG | - | chr4_2:74257052-74257071 | None:intergenic | 30.0% | |
| TCTTGCAGAAAAAGGAAAAG+AGG | + | chr4_2:74255752-74255771 | Msa0621940:CDS | 35.0% | |
| CTTGCAGAAAAAGGAAAAGA+GGG | + | chr4_2:74255753-74255772 | Msa0621940:CDS | 35.0% | |
| GTGTAGTTGCTTATTGAAGT+GGG | - | chr4_2:74255909-74255928 | None:intergenic | 35.0% | |
| TGTGTAGTTGCTTATTGAAG+TGG | - | chr4_2:74255910-74255929 | None:intergenic | 35.0% | |
| TACACAATCTTCCACTTAGT+TGG | + | chr4_2:74255924-74255943 | Msa0621940:CDS | 35.0% | |
| TCTTTCTTGTTGCTCATGAT+TGG | + | chr4_2:74255988-74256007 | Msa0621940:CDS | 35.0% | |
| CTTTCTTGTTGCTCATGATT+GGG | + | chr4_2:74255989-74256008 | Msa0621940:CDS | 35.0% | |
| TTTCTTGTTGCTCATGATTG+GGG | + | chr4_2:74255990-74256009 | Msa0621940:CDS | 35.0% | |
| CTACTATATCTGCAGATTTC+AGG | + | chr4_2:74256148-74256167 | Msa0621940:CDS | 35.0% | |
| TCACCTGTAATGAATTTCAC+TGG | - | chr4_2:74256684-74256703 | None:intergenic | 35.0% | |
| ! | ATGAAGGAGTATATACATGG+AGG | + | chr4_2:74256732-74256751 | Msa0621940:CDS | 35.0% |
| GAGGAAGTGATTGTACAAAA+AGG | + | chr4_2:74256783-74256802 | Msa0621940:CDS | 35.0% | |
| AGTGATTGTACAAAAAGGAG+TGG | + | chr4_2:74256788-74256807 | Msa0621940:CDS | 35.0% | |
| GTGATTGTACAAAAAGGAGT+GGG | + | chr4_2:74256789-74256808 | Msa0621940:CDS | 35.0% | |
| TCTTGCAGAAAAAGGAAAAG+AGG | + | chr4_2:74255752-74255771 | Msa0621940:CDS | 35.0% | |
| CTTGCAGAAAAAGGAAAAGA+GGG | + | chr4_2:74255753-74255772 | Msa0621940:CDS | 35.0% | |
| GTGTAGTTGCTTATTGAAGT+GGG | - | chr4_2:74255909-74255928 | None:intergenic | 35.0% | |
| TGTGTAGTTGCTTATTGAAG+TGG | - | chr4_2:74255910-74255929 | None:intergenic | 35.0% | |
| TACACAATCTTCCACTTAGT+TGG | + | chr4_2:74255924-74255943 | Msa0621940:CDS | 35.0% | |
| TCTTTCTTGTTGCTCATGAT+TGG | + | chr4_2:74255988-74256007 | Msa0621940:CDS | 35.0% | |
| CTTTCTTGTTGCTCATGATT+GGG | + | chr4_2:74255989-74256008 | Msa0621940:CDS | 35.0% | |
| TTTCTTGTTGCTCATGATTG+GGG | + | chr4_2:74255990-74256009 | Msa0621940:CDS | 35.0% | |
| CTACTATATCTGCAGATTTC+AGG | + | chr4_2:74256148-74256167 | Msa0621940:CDS | 35.0% | |
| TCACCTGTAATGAATTTCAC+TGG | - | chr4_2:74256684-74256703 | None:intergenic | 35.0% | |
| ! | ATGAAGGAGTATATACATGG+AGG | + | chr4_2:74256732-74256751 | Msa0621940:CDS | 35.0% |
| GAGGAAGTGATTGTACAAAA+AGG | + | chr4_2:74256783-74256802 | Msa0621940:CDS | 35.0% | |
| AGTGATTGTACAAAAAGGAG+TGG | + | chr4_2:74256788-74256807 | Msa0621940:CDS | 35.0% | |
| GTGATTGTACAAAAAGGAGT+GGG | + | chr4_2:74256789-74256808 | Msa0621940:CDS | 35.0% | |
| CAACGATATCACCAACTAAG+TGG | - | chr4_2:74255938-74255957 | None:intergenic | 40.0% | |
| ! | TTTGGGTTTCTACGTAGGAA+GGG | - | chr4_2:74256086-74256105 | None:intergenic | 40.0% |
| ! | ATTTGGGTTTCTACGTAGGA+AGG | - | chr4_2:74256087-74256106 | None:intergenic | 40.0% |
| TTTACCTGGTTCCTATGACA+TGG | - | chr4_2:74256291-74256310 | None:intergenic | 40.0% | |
| GTCATAGGAACCAGGTAAAA+TGG | + | chr4_2:74256292-74256311 | Msa0621940:intron | 40.0% | |
| ! | ATCTCAGCTTCCATTTTACC+TGG | - | chr4_2:74256305-74256324 | None:intergenic | 40.0% |
| ATCCTCACAACACGGAAAAT+TGG | + | chr4_2:74256359-74256378 | Msa0621940:CDS | 40.0% | |
| TTTGACAAAACAGGCTTCAC+TGG | + | chr4_2:74256491-74256510 | Msa0621940:CDS | 40.0% | |
| ACAAACAATCAGAGAGCTAC+AGG | - | chr4_2:74256544-74256563 | None:intergenic | 40.0% | |
| TCTCTGATTGTTTGTCTCCT+TGG | + | chr4_2:74256549-74256568 | Msa0621940:intron | 40.0% | |
| CTCTGATTGTTTGTCTCCTT+GGG | + | chr4_2:74256550-74256569 | Msa0621940:intron | 40.0% | |
| ! | CTTCTTTGTTTGCAGACTCT+GGG | + | chr4_2:74256620-74256639 | Msa0621940:intron | 40.0% |
| AATGAATTTCACTGGCACCA+AGG | - | chr4_2:74256676-74256695 | None:intergenic | 40.0% | |
| GTGCCAGTGAAATTCATTAC+AGG | + | chr4_2:74256678-74256697 | Msa0621940:CDS | 40.0% | |
| CATTACAGGTGAGCTAGATA+TGG | + | chr4_2:74256692-74256711 | Msa0621940:CDS | 40.0% | |
| ! | GGCATGAAGGAGTATATACA+TGG | + | chr4_2:74256729-74256748 | Msa0621940:CDS | 40.0% |
| ! | AAGGAGTATATACATGGAGG+AGG | + | chr4_2:74256735-74256754 | Msa0621940:CDS | 40.0% |
| TATACATGGAGGAGGAATGA+AGG | + | chr4_2:74256743-74256762 | Msa0621940:CDS | 40.0% | |
| CAACGATATCACCAACTAAG+TGG | - | chr4_2:74255938-74255957 | None:intergenic | 40.0% | |
| ! | TTTGGGTTTCTACGTAGGAA+GGG | - | chr4_2:74256086-74256105 | None:intergenic | 40.0% |
| ! | ATTTGGGTTTCTACGTAGGA+AGG | - | chr4_2:74256087-74256106 | None:intergenic | 40.0% |
| TTTACCTGGTTCCTATGACA+TGG | - | chr4_2:74256291-74256310 | None:intergenic | 40.0% | |
| GTCATAGGAACCAGGTAAAA+TGG | + | chr4_2:74256292-74256311 | Msa0621940:intron | 40.0% | |
| ! | ATCTCAGCTTCCATTTTACC+TGG | - | chr4_2:74256305-74256324 | None:intergenic | 40.0% |
| ATCCTCACAACACGGAAAAT+TGG | + | chr4_2:74256359-74256378 | Msa0621940:CDS | 40.0% | |
| TTTGACAAAACAGGCTTCAC+TGG | + | chr4_2:74256491-74256510 | Msa0621940:CDS | 40.0% | |
| ACAAACAATCAGAGAGCTAC+AGG | - | chr4_2:74256544-74256563 | None:intergenic | 40.0% | |
| TCTCTGATTGTTTGTCTCCT+TGG | + | chr4_2:74256549-74256568 | Msa0621940:intron | 40.0% | |
| CTCTGATTGTTTGTCTCCTT+GGG | + | chr4_2:74256550-74256569 | Msa0621940:intron | 40.0% | |
| ! | CTTCTTTGTTTGCAGACTCT+GGG | + | chr4_2:74256620-74256639 | Msa0621940:intron | 40.0% |
| AATGAATTTCACTGGCACCA+AGG | - | chr4_2:74256676-74256695 | None:intergenic | 40.0% | |
| GTGCCAGTGAAATTCATTAC+AGG | + | chr4_2:74256678-74256697 | Msa0621940:CDS | 40.0% | |
| CATTACAGGTGAGCTAGATA+TGG | + | chr4_2:74256692-74256711 | Msa0621940:CDS | 40.0% | |
| ! | GGCATGAAGGAGTATATACA+TGG | + | chr4_2:74256729-74256748 | Msa0621940:CDS | 40.0% |
| ! | AAGGAGTATATACATGGAGG+AGG | + | chr4_2:74256735-74256754 | Msa0621940:CDS | 40.0% |
| TATACATGGAGGAGGAATGA+AGG | + | chr4_2:74256743-74256762 | Msa0621940:CDS | 40.0% | |
| AGGCATAGAACACAGAACAG+TGG | + | chr4_2:74255707-74255726 | Msa0621940:CDS | 45.0% | |
| CACAGAACAGTGGAAGTGAA+TGG | + | chr4_2:74255717-74255736 | Msa0621940:CDS | 45.0% | |
| CCATGAAGGAACAAGACTAC+TGG | - | chr4_2:74255780-74255799 | None:intergenic | 45.0% | |
| !! | CCAGTAGTCTTGTTCCTTCA+TGG | + | chr4_2:74255777-74255796 | Msa0621940:CDS | 45.0% |
| GTTGCTCTCATAGACTCACT+TGG | + | chr4_2:74255954-74255973 | Msa0621940:CDS | 45.0% | |
| ! | CATGATTGGGGTGCCTTAAT+TGG | + | chr4_2:74256002-74256021 | Msa0621940:CDS | 45.0% |
| ! | ATTGGGGTGCCTTAATTGGT+TGG | + | chr4_2:74256006-74256025 | Msa0621940:CDS | 45.0% |
| ! | ACGTAGGCTTTGACTCTTTC+AGG | - | chr4_2:74256050-74256069 | None:intergenic | 45.0% |
| GGGACTACTAAGACAAACGT+AGG | - | chr4_2:74256066-74256085 | None:intergenic | 45.0% | |
| GATCACTTGCGTGATGTGTA+TGG | + | chr4_2:74256119-74256138 | Msa0621940:CDS | 45.0% | |
| TGATCCATGTCATAGGAACC+AGG | + | chr4_2:74256284-74256303 | Msa0621940:intron | 45.0% | |
| GAAGCTGAGATTGCTGAAGT+TGG | + | chr4_2:74256314-74256333 | Msa0621940:CDS | 45.0% | |
| ! | GACCAATTTTCCGTGTTGTG+AGG | - | chr4_2:74256364-74256383 | None:intergenic | 45.0% |
| TCGTCTTCTGTAAGCCAAGA+GGG | - | chr4_2:74256449-74256468 | None:intergenic | 45.0% | |
| ! | GCTTCTTTGTTTGCAGACTC+TGG | + | chr4_2:74256619-74256638 | Msa0621940:intron | 45.0% |
| GATATGGTGTACACTTCGCT+AGG | + | chr4_2:74256708-74256727 | Msa0621940:CDS | 45.0% | |
| GGAAGATGTGCCGAATTTAG+AGG | + | chr4_2:74256764-74256783 | Msa0621940:CDS | 45.0% | |
| AGGCATAGAACACAGAACAG+TGG | + | chr4_2:74255707-74255726 | Msa0621940:CDS | 45.0% | |
| CACAGAACAGTGGAAGTGAA+TGG | + | chr4_2:74255717-74255736 | Msa0621940:CDS | 45.0% | |
| CCATGAAGGAACAAGACTAC+TGG | - | chr4_2:74255780-74255799 | None:intergenic | 45.0% | |
| !! | CCAGTAGTCTTGTTCCTTCA+TGG | + | chr4_2:74255777-74255796 | Msa0621940:CDS | 45.0% |
| GTTGCTCTCATAGACTCACT+TGG | + | chr4_2:74255954-74255973 | Msa0621940:CDS | 45.0% | |
| ! | CATGATTGGGGTGCCTTAAT+TGG | + | chr4_2:74256002-74256021 | Msa0621940:CDS | 45.0% |
| ! | ATTGGGGTGCCTTAATTGGT+TGG | + | chr4_2:74256006-74256025 | Msa0621940:CDS | 45.0% |
| ! | ACGTAGGCTTTGACTCTTTC+AGG | - | chr4_2:74256050-74256069 | None:intergenic | 45.0% |
| GGGACTACTAAGACAAACGT+AGG | - | chr4_2:74256066-74256085 | None:intergenic | 45.0% | |
| GATCACTTGCGTGATGTGTA+TGG | + | chr4_2:74256119-74256138 | Msa0621940:CDS | 45.0% | |
| TGATCCATGTCATAGGAACC+AGG | + | chr4_2:74256284-74256303 | Msa0621940:intron | 45.0% | |
| GAAGCTGAGATTGCTGAAGT+TGG | + | chr4_2:74256314-74256333 | Msa0621940:CDS | 45.0% | |
| ! | GACCAATTTTCCGTGTTGTG+AGG | - | chr4_2:74256364-74256383 | None:intergenic | 45.0% |
| TCGTCTTCTGTAAGCCAAGA+GGG | - | chr4_2:74256449-74256468 | None:intergenic | 45.0% | |
| ! | GCTTCTTTGTTTGCAGACTC+TGG | + | chr4_2:74256619-74256638 | Msa0621940:intron | 45.0% |
| GATATGGTGTACACTTCGCT+AGG | + | chr4_2:74256708-74256727 | Msa0621940:CDS | 45.0% | |
| GGAAGATGTGCCGAATTTAG+AGG | + | chr4_2:74256764-74256783 | Msa0621940:CDS | 45.0% | |
| CATCACTGTCTCCAAAGCCA+CGG | - | chr4_2:74255884-74255903 | None:intergenic | 50.0% | |
| ! | TACTTGCCGGTGGGAAGTAT+TGG | - | chr4_2:74256389-74256408 | None:intergenic | 50.0% |
| ATACTTCCCACCGGCAAGTA+CGG | + | chr4_2:74256389-74256408 | Msa0621940:CDS | 50.0% | |
| GAATCCAGTTCCGTACTTGC+CGG | - | chr4_2:74256402-74256421 | None:intergenic | 50.0% | |
| GTACGGAACTGGATTCAACC+CGG | + | chr4_2:74256406-74256425 | Msa0621940:CDS | 50.0% | |
| TTCTGTAAGCCAAGAGGGCA+AGG | - | chr4_2:74256444-74256463 | None:intergenic | 50.0% | |
| GTCGTCTTCTGTAAGCCAAG+AGG | - | chr4_2:74256450-74256469 | None:intergenic | 50.0% | |
| GACAAAACAGGCTTCACTGG+AGG | + | chr4_2:74256494-74256513 | Msa0621940:CDS | 50.0% | |
| ! | AAGGTTTTCACTCCGGTCCA+TGG | - | chr4_2:74256657-74256676 | None:intergenic | 50.0% |
| ATGGACCGGAGTGAAAACCT+TGG | + | chr4_2:74256656-74256675 | Msa0621940:CDS | 50.0% | |
| ! | TGGCACCAAGGTTTTCACTC+CGG | - | chr4_2:74256664-74256683 | None:intergenic | 50.0% |
| GTACACTTCGCTAGGCATGA+AGG | + | chr4_2:74256716-74256735 | Msa0621940:CDS | 50.0% | |
| !! | AGGGCACCGATTAGAACTTC+AGG | - | chr4_2:74256872-74256891 | None:intergenic | 50.0% |
| CATCACTGTCTCCAAAGCCA+CGG | - | chr4_2:74255884-74255903 | None:intergenic | 50.0% | |
| ! | TACTTGCCGGTGGGAAGTAT+TGG | - | chr4_2:74256389-74256408 | None:intergenic | 50.0% |
| ATACTTCCCACCGGCAAGTA+CGG | + | chr4_2:74256389-74256408 | Msa0621940:CDS | 50.0% | |
| GAATCCAGTTCCGTACTTGC+CGG | - | chr4_2:74256402-74256421 | None:intergenic | 50.0% | |
| GTACGGAACTGGATTCAACC+CGG | + | chr4_2:74256406-74256425 | Msa0621940:CDS | 50.0% | |
| TTCTGTAAGCCAAGAGGGCA+AGG | - | chr4_2:74256444-74256463 | None:intergenic | 50.0% | |
| GTCGTCTTCTGTAAGCCAAG+AGG | - | chr4_2:74256450-74256469 | None:intergenic | 50.0% | |
| GACAAAACAGGCTTCACTGG+AGG | + | chr4_2:74256494-74256513 | Msa0621940:CDS | 50.0% | |
| ! | AAGGTTTTCACTCCGGTCCA+TGG | - | chr4_2:74256657-74256676 | None:intergenic | 50.0% |
| ATGGACCGGAGTGAAAACCT+TGG | + | chr4_2:74256656-74256675 | Msa0621940:CDS | 50.0% | |
| ! | TGGCACCAAGGTTTTCACTC+CGG | - | chr4_2:74256664-74256683 | None:intergenic | 50.0% |
| GTACACTTCGCTAGGCATGA+AGG | + | chr4_2:74256716-74256735 | Msa0621940:CDS | 50.0% | |
| !! | AGGGCACCGATTAGAACTTC+AGG | - | chr4_2:74256872-74256891 | None:intergenic | 50.0% |
| AGAGTTCGGGGAAGCCATGA+AGG | - | chr4_2:74255794-74255813 | None:intergenic | 55.0% | |
| TTCATGGCTTCCCCGAACTC+TGG | + | chr4_2:74255793-74255812 | Msa0621940:CDS | 55.0% | |
| TCCCCGAACTCTGGTACTCA+TGG | + | chr4_2:74255802-74255821 | Msa0621940:CDS | 55.0% | |
| GCCATGAGTACCAGAGTTCG+GGG | - | chr4_2:74255806-74255825 | None:intergenic | 55.0% | |
| CGCCATGAGTACCAGAGTTC+GGG | - | chr4_2:74255807-74255826 | None:intergenic | 55.0% | |
| GCGCCATGAGTACCAGAGTT+CGG | - | chr4_2:74255808-74255827 | None:intergenic | 55.0% | |
| AACTGAGGGCCACAATCTGG+TGG | - | chr4_2:74255830-74255849 | None:intergenic | 55.0% | |
| ATTGTGGCCCTCAGTTCCCT+CGG | + | chr4_2:74255834-74255853 | Msa0621940:CDS | 55.0% | |
| TCTCCAAAGCCACGGAGATC+GGG | - | chr4_2:74255876-74255895 | None:intergenic | 55.0% | |
| GTCTCCAAAGCCACGGAGAT+CGG | - | chr4_2:74255877-74255896 | None:intergenic | 55.0% | |
| GGTCCTCCAATACTTCCCAC+CGG | + | chr4_2:74256380-74256399 | Msa0621940:CDS | 55.0% | |
| !! | TTGCCGGTGGGAAGTATTGG+AGG | - | chr4_2:74256386-74256405 | None:intergenic | 55.0% |
| TCTGGGAGCTCACAACTCCA+TGG | + | chr4_2:74256637-74256656 | Msa0621940:CDS | 55.0% | |
| GAGCTCACAACTCCATGGAC+CGG | + | chr4_2:74256642-74256661 | Msa0621940:CDS | 55.0% | |
| AGAGTTCGGGGAAGCCATGA+AGG | - | chr4_2:74255794-74255813 | None:intergenic | 55.0% | |
| TTCATGGCTTCCCCGAACTC+TGG | + | chr4_2:74255793-74255812 | Msa0621940:CDS | 55.0% | |
| TCCCCGAACTCTGGTACTCA+TGG | + | chr4_2:74255802-74255821 | Msa0621940:CDS | 55.0% | |
| GCCATGAGTACCAGAGTTCG+GGG | - | chr4_2:74255806-74255825 | None:intergenic | 55.0% | |
| CGCCATGAGTACCAGAGTTC+GGG | - | chr4_2:74255807-74255826 | None:intergenic | 55.0% | |
| GCGCCATGAGTACCAGAGTT+CGG | - | chr4_2:74255808-74255827 | None:intergenic | 55.0% | |
| AACTGAGGGCCACAATCTGG+TGG | - | chr4_2:74255830-74255849 | None:intergenic | 55.0% | |
| ATTGTGGCCCTCAGTTCCCT+CGG | + | chr4_2:74255834-74255853 | Msa0621940:CDS | 55.0% | |
| TCTCCAAAGCCACGGAGATC+GGG | - | chr4_2:74255876-74255895 | None:intergenic | 55.0% | |
| GTCTCCAAAGCCACGGAGAT+CGG | - | chr4_2:74255877-74255896 | None:intergenic | 55.0% | |
| GGTCCTCCAATACTTCCCAC+CGG | + | chr4_2:74256380-74256399 | Msa0621940:CDS | 55.0% | |
| !! | TTGCCGGTGGGAAGTATTGG+AGG | - | chr4_2:74256386-74256405 | None:intergenic | 55.0% |
| TCTGGGAGCTCACAACTCCA+TGG | + | chr4_2:74256637-74256656 | Msa0621940:CDS | 55.0% | |
| GAGCTCACAACTCCATGGAC+CGG | + | chr4_2:74256642-74256661 | Msa0621940:CDS | 55.0% | |
| CTCATGGCGCCACCAGATTG+TGG | + | chr4_2:74255818-74255837 | Msa0621940:CDS | 60.0% | |
| GGGAACTGAGGGCCACAATC+TGG | - | chr4_2:74255833-74255852 | None:intergenic | 60.0% | |
| GTGGTAGCCGAGGGAACTGA+GGG | - | chr4_2:74255844-74255863 | None:intergenic | 60.0% | |
| CCAGTTCCGTACTTGCCGGT+GGG | - | chr4_2:74256398-74256417 | None:intergenic | 60.0% | |
| TCCAGTTCCGTACTTGCCGG+TGG | - | chr4_2:74256399-74256418 | None:intergenic | 60.0% | |
| !! | GCAAGGTGTCAGGGGTATCC+GGG | - | chr4_2:74256427-74256446 | None:intergenic | 60.0% |
| !! | GGCAAGGTGTCAGGGGTATC+CGG | - | chr4_2:74256428-74256447 | None:intergenic | 60.0% |
| ! | CCAAGAGGGCAAGGTGTCAG+GGG | - | chr4_2:74256435-74256454 | None:intergenic | 60.0% |
| ! | GCCAAGAGGGCAAGGTGTCA+GGG | - | chr4_2:74256436-74256455 | None:intergenic | 60.0% |
| ! | AGCCAAGAGGGCAAGGTGTC+AGG | - | chr4_2:74256437-74256456 | None:intergenic | 60.0% |
| CTCATGGCGCCACCAGATTG+TGG | + | chr4_2:74255818-74255837 | Msa0621940:CDS | 60.0% | |
| GGGAACTGAGGGCCACAATC+TGG | - | chr4_2:74255833-74255852 | None:intergenic | 60.0% | |
| GTGGTAGCCGAGGGAACTGA+GGG | - | chr4_2:74255844-74255863 | None:intergenic | 60.0% | |
| CCAGTTCCGTACTTGCCGGT+GGG | - | chr4_2:74256398-74256417 | None:intergenic | 60.0% | |
| TCCAGTTCCGTACTTGCCGG+TGG | - | chr4_2:74256399-74256418 | None:intergenic | 60.0% | |
| !! | GCAAGGTGTCAGGGGTATCC+GGG | - | chr4_2:74256427-74256446 | None:intergenic | 60.0% |
| !! | GGCAAGGTGTCAGGGGTATC+CGG | - | chr4_2:74256428-74256447 | None:intergenic | 60.0% |
| ! | CCAAGAGGGCAAGGTGTCAG+GGG | - | chr4_2:74256435-74256454 | None:intergenic | 60.0% |
| ! | GCCAAGAGGGCAAGGTGTCA+GGG | - | chr4_2:74256436-74256455 | None:intergenic | 60.0% |
| ! | AGCCAAGAGGGCAAGGTGTC+AGG | - | chr4_2:74256437-74256456 | None:intergenic | 60.0% |
| CGTGGTAGCCGAGGGAACTG+AGG | - | chr4_2:74255845-74255864 | None:intergenic | 65.0% | |
| AGCTACGGCGTGGTAGCCGA+GGG | - | chr4_2:74255853-74255872 | None:intergenic | 65.0% | |
| GCCACGGAGATCGGGAGCTA+CGG | - | chr4_2:74255868-74255887 | None:intergenic | 65.0% | |
| GCTCCCGATCTCCGTGGCTT+TGG | + | chr4_2:74255870-74255889 | Msa0621940:CDS | 65.0% | |
| CCCACCGGCAAGTACGGAAC+TGG | + | chr4_2:74256395-74256414 | Msa0621940:CDS | 65.0% | |
| CCCCTGACACCTTGCCCTCT+TGG | + | chr4_2:74256432-74256451 | Msa0621940:CDS | 65.0% | |
| CGTGGTAGCCGAGGGAACTG+AGG | - | chr4_2:74255845-74255864 | None:intergenic | 65.0% | |
| AGCTACGGCGTGGTAGCCGA+GGG | - | chr4_2:74255853-74255872 | None:intergenic | 65.0% | |
| GCCACGGAGATCGGGAGCTA+CGG | - | chr4_2:74255868-74255887 | None:intergenic | 65.0% | |
| GCTCCCGATCTCCGTGGCTT+TGG | + | chr4_2:74255870-74255889 | Msa0621940:CDS | 65.0% | |
| CCCACCGGCAAGTACGGAAC+TGG | + | chr4_2:74256395-74256414 | Msa0621940:CDS | 65.0% | |
| CCCCTGACACCTTGCCCTCT+TGG | + | chr4_2:74256432-74256451 | Msa0621940:CDS | 65.0% | |
| GAGCTACGGCGTGGTAGCCG+AGG | - | chr4_2:74255854-74255873 | None:intergenic | 70.0% | |
| GGAGATCGGGAGCTACGGCG+TGG | - | chr4_2:74255863-74255882 | None:intergenic | 70.0% | |
| GCCGTAGCTCCCGATCTCCG+TGG | + | chr4_2:74255864-74255883 | Msa0621940:CDS | 70.0% | |
| GAGCTACGGCGTGGTAGCCG+AGG | - | chr4_2:74255854-74255873 | None:intergenic | 70.0% | |
| GGAGATCGGGAGCTACGGCG+TGG | - | chr4_2:74255863-74255882 | None:intergenic | 70.0% | |
| GCCGTAGCTCCCGATCTCCG+TGG | + | chr4_2:74255864-74255883 | Msa0621940:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 74255676 | 74257181 | 74255676 | ID=Msa0621940;Name=Msa0621940 |
| chr4_2 | mRNA | 74255676 | 74257181 | 74255676 | ID=Msa0621940-mRNA-1;Parent=Msa0621940;Name=Msa0621940-mRNA-1;_AED=0.06;_eAED=0.06;_QI=26|1|1|1|1|1|3|300|319 |
| chr4_2 | exon | 74255676 | 74256169 | 74255676 | ID=Msa0621940-mRNA-1:exon:22338;Parent=Msa0621940-mRNA-1 |
| chr4_2 | exon | 74256299 | 74256543 | 74256299 | ID=Msa0621940-mRNA-1:exon:22339;Parent=Msa0621940-mRNA-1 |
| chr4_2 | exon | 74256635 | 74257181 | 74256635 | ID=Msa0621940-mRNA-1:exon:22340;Parent=Msa0621940-mRNA-1 |
| chr4_2 | five_prime_UTR | 74255676 | 74255701 | 74255676 | ID=Msa0621940-mRNA-1:five_prime_utr;Parent=Msa0621940-mRNA-1 |
| chr4_2 | CDS | 74255702 | 74256169 | 74255702 | ID=Msa0621940-mRNA-1:cds;Parent=Msa0621940-mRNA-1 |
| chr4_2 | CDS | 74256299 | 74256543 | 74256299 | ID=Msa0621940-mRNA-1:cds;Parent=Msa0621940-mRNA-1 |
| chr4_2 | CDS | 74256635 | 74256881 | 74256635 | ID=Msa0621940-mRNA-1:cds;Parent=Msa0621940-mRNA-1 |
| chr4_2 | three_prime_UTR | 74256882 | 74257181 | 74256882 | ID=Msa0621940-mRNA-1:three_prime_utr;Parent=Msa0621940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
