AlfalfaGEDB | Msa0622010

M. sativa cultivar zhongmu-4 / Msa0622010

KEGG: K08726
GO: GO:0000287 GO:0001676 GO:0003008 GO:0003013 GO:0003018 GO:0003674 GO:0003824 GO:0004301 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005782 GO:0005829 GO:0006082 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006633 GO:0006690 GO:0006725 GO:0006793 GO:0006796 GO:0006805 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006886 GO:0006950 GO:0006952 GO:0006954 GO:0006996 GO:0007031 GO:0008015 GO:0008104 GO:0008150 GO:0008152 GO:0008217 GO:0008610 GO:0009056 GO:0009058 GO:0009410 GO:0009636 GO:0009810 GO:0009893 GO:0009987 GO:0010468 GO:0010604 GO:0010628 GO:0015031 GO:0015643 GO:0015833 GO:0016043 GO:0016053 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0016801 GO:0016803 GO:0017144 GO:0018904 GO:0019216 GO:0019218 GO:0019222 GO:0019369 GO:0019373 GO:0019439 GO:0019725 GO:0019752 GO:0030003 GO:0030258 GO:0031907 GO:0031974 GO:0032501 GO:0032787 GO:0033036 GO:0033365 GO:0033559 GO:0034613 GO:0035150 GO:0035296 GO:0042221 GO:0042577 GO:0042578 GO:0042579 GO:0042592 GO:0042632 GO:0042759 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046272 GO:0046394 GO:0046483 GO:0046839 GO:0046872 GO:0046907 GO:0046983 GO:0048518 GO:0048878 GO:0050789 GO:0050801 GO:0050880 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055088 GO:0055092 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0070887 GO:0071466 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072330 GO:0072503 GO:0072507 GO:0072593 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0090066 GO:0090181 GO:0097176 GO:0097746 GO:0097755 GO:0098771 GO:1900673 GO:1901360 GO:1901361 GO:1901568 GO:1901575 GO:1901576
PFAM: PF00561.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0622010	GAU11476.1	87.461	319	39	1	1	319	1	318	0.0	587

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0622010	sp\|I6YGS0\|EPHA_MYCTU	36.308	325	189	6	1	316	1	316	5.62e-62	202

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0621940	Msa0622010	0.995975	5.771501e-222	-8.615850e-47
Msa0622010	Msa1039480	0.881865	1.681521e-70	-8.615850e-47
Msa0622010	Msa1085590	0.855460	6.217581e-62	-8.615850e-47
Msa0622010	Msa1305040	0.996557	4.512964e-229	-8.615850e-47
Msa0622010	Msa1433300	0.994948	1.247653e-211	-8.615850e-47
Msa0575990	Msa0622010	0.820443	6.840930e-53	-8.615850e-47
Msa0576100	Msa0622010	0.814382	1.584775e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0622010	MtrunA17_Chr7g0272481	84.639	319	49	0	1	319	1	319	0.0	568
Msa0622010	MtrunA17_Chr7g0272531	82.759	319	55	0	1	319	31	349	0.0	567
Msa0622010	MtrunA17_Chr7g0272501	82.445	319	56	0	1	319	1	319	0.0	563
Msa0622010	MtrunA17_Chr7g0272181	81.818	319	58	0	1	319	1	319	0.0	559
Msa0622010	MtrunA17_Chr7g0272171	81.191	319	60	0	1	319	1	319	0.0	553
Msa0622010	MtrunA17_Chr7g0272431	72.897	321	83	2	1	319	1	319	4.28e-179	497
Msa0622010	MtrunA17_Chr7g0272441	73.832	321	80	2	1	319	1	319	1.85e-177	493
Msa0622010	MtrunA17_Chr4g0000111	71.207	323	88	3	1	319	1	322	7.57e-175	487
Msa0622010	MtrunA17_Chr7g0272451	71.160	319	89	2	1	319	1	316	2.56e-174	485
Msa0622010	MtrunA17_Chr4g0067581	61.059	321	121	3	1	319	37	355	1.94e-142	406
Msa0622010	MtrunA17_Chr7g0269471	56.740	319	136	2	1	319	1	317	3.02e-134	384
Msa0622010	MtrunA17_Chr8g0372491	46.708	319	166	3	1	319	3	317	1.24e-103	306
Msa0622010	MtrunA17_Chr7g0272471	82.051	156	28	0	1	156	1	156	9.05e-96	280
Msa0622010	MtrunA17_Chr1g0192291	73.585	159	38	2	1	156	1	158	3.10e-83	249
Msa0622010	MtrunA17_Chr2g0324141	37.383	321	187	7	1	318	1	310	1.14e-66	211
Msa0622010	MtrunA17_Chr2g0324161	36.760	321	189	7	1	318	1	310	3.80e-64	205
Msa0622010	MtrunA17_Chr4g0047701	36.137	321	190	6	1	318	1	309	6.95e-62	199
Msa0622010	MtrunA17_Chr4g0047681	34.579	321	195	6	1	318	1	309	2.08e-59	192
Msa0622010	MtrunA17_Chr7g0272391	69.231	117	14	2	161	276	1	96	2.65e-45	150
Msa0622010	MtrunA17_Chr7g0272461	59.813	107	39	2	177	281	1	105	1.22e-36	128
Msa0622010	MtrunA17_Chr3g0086531	72.603	73	20	0	80	152	1	73	1.58e-33	119
Msa0622010	MtrunA17_Chr7g0272511	76.316	38	9	0	278	315	29	66	8.87e-13	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0622010	AT3G05600.1	61.111	324	121	4	1	319	1	324	5.20e-149	422
Msa0622010	AT4G02340.1	56.386	321	133	4	1	319	1	316	3.32e-134	384
Msa0622010	AT4G15960.1	54.154	325	142	3	1	319	51	374	1.37e-125	364
Msa0622010	AT2G26740.1	59.317	322	124	4	4	319	1	321	8.38e-125	360
Msa0622010	AT2G26750.1	57.632	321	130	4	4	319	1	320	1.32e-119	347
Msa0622010	AT3G05600.2	61.728	243	88	4	1	238	1	243	3.92e-109	317
Msa0622010	AT4G15955.3	51.077	325	123	5	5	319	6	304	7.53e-106	311
Msa0622010	AT3G51000.1	44.954	327	159	6	3	319	4	319	1.33e-97	291
Msa0622010	AT4G15955.2	57.471	174	64	2	5	168	6	179	1.34e-67	209
Msa0622010	AT4G15955.1	57.576	165	60	2	5	159	6	170	1.51e-63	199

Find 96 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACGTAGGCTTTGACTCTTTC+AGG	0.145162	4_2:+74376046	None:intergenic
CTACTATATCTGCAGATTTC+AGG	0.187669	4_2:-74375945	Msa0622010:intron
CATGATTGGGGTGCCTTAAT+TGG	0.213822	4_2:-74376091	Msa0622010:CDS
CCAGTAGTCTTGTTCCTTCA+TGG	0.244564	4_2:-74376316	Msa0622010:CDS
TCTTTCTTGTTGCTCATGAT+TGG	0.261993	4_2:-74376105	Msa0622010:CDS
GAGGAAGTGATTGTACAAAA+AGG	0.277197	4_2:-74375310	Msa0622010:CDS
GTCATAGGAACCAGGTAAAA+TGG	0.282976	4_2:-74375801	Msa0622010:intron
CTTTCTTGTTGCTCATGATT+GGG	0.285427	4_2:-74376104	Msa0622010:CDS
AAAATGCATCTTGCAGAAAA+AGG	0.286834	4_2:-74376349	Msa0622010:CDS
ATAGATTATACCATCTTATA+TGG	0.288780	4_2:-74375054	Msa0622010:three_prime_UTR
TTAACATCTTTGTCACGTTT+AGG	0.290784	4_2:+74375204	None:intergenic
AGCCAAGAGGGCAAGGTGTC+AGG	0.303963	4_2:+74375659	None:intergenic
CCCCTGACACCTTGCCCTCT+TGG	0.306808	4_2:-74375661	Msa0622010:CDS
CGCCATGAGTACCAGAGTTC+GGG	0.318900	4_2:+74376289	None:intergenic
TAACATCTTTGTCACGTTTA+GGG	0.321271	4_2:+74375205	None:intergenic
ACAAAGATACCAACCAATTA+AGG	0.323697	4_2:+74376078	None:intergenic
GTCTCTAAATTTGACAAAAC+AGG	0.325042	4_2:-74375611	Msa0622010:CDS
ATCCTCACAACACGGAAAAT+TGG	0.340437	4_2:-74375734	Msa0622010:CDS
GGCAAGGTGTCAGGGGTATC+CGG	0.344243	4_2:+74375668	None:intergenic
TACGTAGAAACCCAAATAAA+AGG	0.378449	4_2:-74376003	Msa0622010:CDS
GCTCCCGATCTCCGTGGCTT+TGG	0.388680	4_2:-74376223	Msa0622010:CDS
GTGCCAGTGAAATTCATTAC+AGG	0.390811	4_2:-74375415	Msa0622010:CDS
TTTGACAAAACAGGCTTCAC+TGG	0.391236	4_2:-74375602	Msa0622010:CDS
AGGGCACCGATTAGAACTTC+AGG	0.393206	4_2:+74375224	None:intergenic
ACAATCACTTCCTCTAAATT+CGG	0.394533	4_2:+74375319	None:intergenic
CTTCTTTGTTTGCAGACTCT+GGG	0.399025	4_2:-74375473	Msa0622010:intron
TACACAATCTTCCACTTAGT+TGG	0.410078	4_2:-74376169	Msa0622010:CDS
GCGCCATGAGTACCAGAGTT+CGG	0.415510	4_2:+74376288	None:intergenic
CTGCTTCTTGATTATTAAAG+TGG	0.416796	4_2:+74375281	None:intergenic
GAATCCAGTTCCGTACTTGC+CGG	0.427409	4_2:+74375694	None:intergenic
ACTTAAAATCATCAAGGTCT+TGG	0.445786	4_2:+74375081	None:intergenic
GTCTCCAAAGCCACGGAGAT+CGG	0.447397	4_2:+74376219	None:intergenic
CATTACAGGTGAGCTAGATA+TGG	0.453391	4_2:-74375401	Msa0622010:CDS
TCTCCAAAGCCACGGAGATC+GGG	0.455811	4_2:+74376220	None:intergenic
GGAAGATGTGCCGAATTTAG+AGG	0.457691	4_2:-74375329	Msa0622010:CDS
GGGAACTGAGGGCCACAATC+TGG	0.459581	4_2:+74376263	None:intergenic
TACTTGCCGGTGGGAAGTAT+TGG	0.475789	4_2:+74375707	None:intergenic
CCCACCGGCAAGTACGGAAC+TGG	0.478584	4_2:-74375698	Msa0622010:CDS
GCCAAGAGGGCAAGGTGTCA+GGG	0.488708	4_2:+74375660	None:intergenic
GATCACTTGCGTGATGTGTA+TGG	0.490923	4_2:-74375974	Msa0622010:CDS
TTCATGGCTTCCCCGAACTC+TGG	0.493938	4_2:-74376300	Msa0622010:CDS
GCAAGGTGTCAGGGGTATCC+GGG	0.499424	4_2:+74375669	None:intergenic
ATTCATCCTGAAGTTCTAAT+CGG	0.501509	4_2:-74375230	Msa0622010:exon
TTTCTTGTTGCTCATGATTG+GGG	0.508757	4_2:-74376103	Msa0622010:CDS
ATTTGGGTTTCTACGTAGGA+AGG	0.512776	4_2:+74376009	None:intergenic
TCCCCGAACTCTGGTACTCA+TGG	0.513767	4_2:-74376291	Msa0622010:CDS
TATACATGGAGGAGGAATGA+AGG	0.514026	4_2:-74375350	Msa0622010:CDS
CACAGAACAGTGGAAGTGAA+TGG	0.515742	4_2:-74376376	Msa0622010:CDS
GCCACGGAGATCGGGAGCTA+CGG	0.522060	4_2:+74376228	None:intergenic
ATTGGGGTGCCTTAATTGGT+TGG	0.526960	4_2:-74376087	Msa0622010:CDS
ATACTTCCCACCGGCAAGTA+CGG	0.526961	4_2:-74375704	Msa0622010:CDS
TTCTGTAAGCCAAGAGGGCA+AGG	0.536914	4_2:+74375652	None:intergenic
CTCATGGCGCCACCAGATTG+TGG	0.538156	4_2:-74376275	Msa0622010:CDS
CAACGATATCACCAACTAAG+TGG	0.540284	4_2:+74376158	None:intergenic
GAGCTACGGCGTGGTAGCCG+AGG	0.552775	4_2:+74376242	None:intergenic
TTGCCGGTGGGAAGTATTGG+AGG	0.553767	4_2:+74375710	None:intergenic
ATGCAAACTTAAAATCATCA+AGG	0.555240	4_2:+74375075	None:intergenic
GTGTAGTTGCTTATTGAAGT+GGG	0.557721	4_2:+74376187	None:intergenic
ACTAGTACAACCATATAAGA+TGG	0.557805	4_2:+74375044	None:intergenic
TCACCTGTAATGAATTTCAC+TGG	0.565006	4_2:+74375412	None:intergenic
AGAGTTCGGGGAAGCCATGA+AGG	0.565421	4_2:+74376302	None:intergenic
TCTGGGAGCTCACAACTCCA+TGG	0.565482	4_2:-74375456	Msa0622010:CDS
TCCAGTTCCGTACTTGCCGG+TGG	0.566439	4_2:+74375697	None:intergenic
CCATGAAGGAACAAGACTAC+TGG	0.567142	4_2:+74376316	None:intergenic
TGATCCATGTCATAGGAACC+AGG	0.570861	4_2:-74375809	Msa0622010:intron
TTTGGGTTTCTACGTAGGAA+GGG	0.576884	4_2:+74376010	None:intergenic
TCGTCTTCTGTAAGCCAAGA+GGG	0.589343	4_2:+74375647	None:intergenic
GAAGCTGAGATTGCTGAAGT+TGG	0.590696	4_2:-74375779	Msa0622010:CDS
GGCATGAAGGAGTATATACA+TGG	0.590893	4_2:-74375364	Msa0622010:CDS
TGTGTAGTTGCTTATTGAAG+TGG	0.591667	4_2:+74376186	None:intergenic
GAGCTCACAACTCCATGGAC+CGG	0.592214	4_2:-74375451	Msa0622010:CDS
AAGGAGTATATACATGGAGG+AGG	0.594079	4_2:-74375358	Msa0622010:CDS
GACAAAACAGGCTTCACTGG+AGG	0.595419	4_2:-74375599	Msa0622010:CDS
AGCTACGGCGTGGTAGCCGA+GGG	0.595559	4_2:+74376243	None:intergenic
GATATGGTGTACACTTCGCT+AGG	0.598016	4_2:-74375385	Msa0622010:CDS
ATTTAGAGACAAAGTAAGCA+AGG	0.606314	4_2:+74375624	None:intergenic
CGTGGTAGCCGAGGGAACTG+AGG	0.611603	4_2:+74376251	None:intergenic
GTGGTAGCCGAGGGAACTGA+GGG	0.612520	4_2:+74376252	None:intergenic
ATTGTGGCCCTCAGTTCCCT+CGG	0.614475	4_2:-74376259	Msa0622010:CDS
AACTGAGGGCCACAATCTGG+TGG	0.616466	4_2:+74376266	None:intergenic
CCAGTTCCGTACTTGCCGGT+GGG	0.621230	4_2:+74375698	None:intergenic
GTACACTTCGCTAGGCATGA+AGG	0.627184	4_2:-74375377	Msa0622010:CDS
CCAAGAGGGCAAGGTGTCAG+GGG	0.630193	4_2:+74375661	None:intergenic
CATCACTGTCTCCAAAGCCA+CGG	0.638680	4_2:+74376212	None:intergenic
ATGGACCGGAGTGAAAACCT+TGG	0.641351	4_2:-74375437	Msa0622010:CDS
GGTCCTCCAATACTTCCCAC+CGG	0.646331	4_2:-74375713	Msa0622010:CDS
GTTGCTCTCATAGACTCACT+TGG	0.649822	4_2:-74376139	Msa0622010:CDS
AATGAATTTCACTGGCACCA+AGG	0.651882	4_2:+74375420	None:intergenic
GTCGTCTTCTGTAAGCCAAG+AGG	0.663533	4_2:+74375646	None:intergenic
GGAGATCGGGAGCTACGGCG+TGG	0.695350	4_2:+74376233	None:intergenic
GCCATGAGTACCAGAGTTCG+GGG	0.700987	4_2:+74376290	None:intergenic
GTACGGAACTGGATTCAACC+CGG	0.702183	4_2:-74375687	Msa0622010:CDS
AGGCATAGAACACAGAACAG+TGG	0.709768	4_2:-74376386	Msa0622010:CDS
GCCGTAGCTCCCGATCTCCG+TGG	0.712868	4_2:-74376229	Msa0622010:CDS
GGGACTACTAAGACAAACGT+AGG	0.722492	4_2:+74376030	None:intergenic
ATGAAGGAGTATATACATGG+AGG	0.728089	4_2:-74375361	Msa0622010:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTACTTTAATGAATGAT+TGG	-	chr4_2:74375501-74375520	Msa0622010:intron	15.0%
!!!	GATAATCAAATTTTCATTTA+GGG	-	chr4_2:74375830-74375849	Msa0622010:intron	15.0%
!!!	ATTTTACTTTAATGAATGAT+TGG	-	chr4_2:74375501-74375520	Msa0622010:intron	15.0%
!!!	GATAATCAAATTTTCATTTA+GGG	-	chr4_2:74375830-74375849	Msa0622010:intron	15.0%
!!!	TTTGAAATATGATCATATAG+AGG	+	chr4_2:74375448-74375467	None:intergenic	20.0%
!!!	GGATAATCAAATTTTCATTT+AGG	-	chr4_2:74375829-74375848	Msa0622010:intron	20.0%
!!	ATAGATTATACCATCTTATA+TGG	-	chr4_2:74376297-74376316	Msa0622010:CDS	20.0%
!!!	TTTGAAATATGATCATATAG+AGG	+	chr4_2:74375448-74375467	None:intergenic	20.0%
!!!	GGATAATCAAATTTTCATTT+AGG	-	chr4_2:74375829-74375848	Msa0622010:intron	20.0%
!!	ATAGATTATACCATCTTATA+TGG	-	chr4_2:74376297-74376316	Msa0622010:CDS	20.0%
!!!	TCCATCTCTTTTTTTTCTTA+CGG	+	chr4_2:74374945-74374964	None:intergenic	25.0%
!	TAAGAAAAAAAAGAGATGGA+AGG	-	chr4_2:74374945-74374964	Msa0622010:three_prime_UTR	25.0%
!!!	GATCTATGATCCTTTTATTT+GGG	+	chr4_2:74375361-74375380	None:intergenic	25.0%
!!	TGATCTATGATCCTTTTATT+TGG	+	chr4_2:74375362-74375381	None:intergenic	25.0%
!	ATGAAAATTTGATTATCCCA+AGG	+	chr4_2:74375827-74375846	None:intergenic	25.0%
!	ATGCAAACTTAAAATCATCA+AGG	+	chr4_2:74376279-74376298	None:intergenic	25.0%
!!!	TCCATCTCTTTTTTTTCTTA+CGG	+	chr4_2:74374945-74374964	None:intergenic	25.0%
!	TAAGAAAAAAAAGAGATGGA+AGG	-	chr4_2:74374945-74374964	Msa0622010:three_prime_UTR	25.0%
!!!	GATCTATGATCCTTTTATTT+GGG	+	chr4_2:74375361-74375380	None:intergenic	25.0%
!!	TGATCTATGATCCTTTTATT+TGG	+	chr4_2:74375362-74375381	None:intergenic	25.0%
!	ATGAAAATTTGATTATCCCA+AGG	+	chr4_2:74375827-74375846	None:intergenic	25.0%
!	ATGCAAACTTAAAATCATCA+AGG	+	chr4_2:74376279-74376298	None:intergenic	25.0%
	TCCGTAAGAAAAAAAAGAGA+TGG	-	chr4_2:74374941-74374960	Msa0622010:three_prime_UTR	30.0%
	AAAATGCATCTTGCAGAAAA+AGG	-	chr4_2:74375002-74375021	Msa0622010:three_prime_UTR	30.0%
	ACAAAGATACCAACCAATTA+AGG	+	chr4_2:74375276-74375295	None:intergenic	30.0%
!!	TTTTATTTGGGTTTCTACGT+AGG	+	chr4_2:74375349-74375368	None:intergenic	30.0%
	TACGTAGAAACCCAAATAAA+AGG	-	chr4_2:74375348-74375367	Msa0622010:CDS	30.0%
	AAATATGATCATATAGAGGC+TGG	+	chr4_2:74375444-74375463	None:intergenic	30.0%
!!!	TTGTTTTTGATCCATGTCAT+AGG	-	chr4_2:74375535-74375554	Msa0622010:intron	30.0%
!!	GATATTTTTCAGCACATAAG+CGG	+	chr4_2:74375600-74375619	None:intergenic	30.0%
	TGAAAAATATCCTCACAACA+CGG	-	chr4_2:74375609-74375628	Msa0622010:CDS	30.0%
	ATTTAGAGACAAAGTAAGCA+AGG	+	chr4_2:74375730-74375749	None:intergenic	30.0%
	GTCTCTAAATTTGACAAAAC+AGG	-	chr4_2:74375740-74375759	Msa0622010:CDS	30.0%
	ACAATCACTTCCTCTAAATT+CGG	+	chr4_2:74376035-74376054	None:intergenic	30.0%
	CTGCTTCTTGATTATTAAAG+TGG	+	chr4_2:74376073-74376092	None:intergenic	30.0%
!	ATTCATCCTGAAGTTCTAAT+CGG	-	chr4_2:74376121-74376140	Msa0622010:CDS	30.0%
	TAACATCTTTGTCACGTTTA+GGG	+	chr4_2:74376149-74376168	None:intergenic	30.0%
	TTAACATCTTTGTCACGTTT+AGG	+	chr4_2:74376150-74376169	None:intergenic	30.0%
	ACTTAAAATCATCAAGGTCT+TGG	+	chr4_2:74376273-74376292	None:intergenic	30.0%
	ACTAGTACAACCATATAAGA+TGG	+	chr4_2:74376310-74376329	None:intergenic	30.0%
	TCCGTAAGAAAAAAAAGAGA+TGG	-	chr4_2:74374941-74374960	Msa0622010:three_prime_UTR	30.0%
	AAAATGCATCTTGCAGAAAA+AGG	-	chr4_2:74375002-74375021	Msa0622010:three_prime_UTR	30.0%
	ACAAAGATACCAACCAATTA+AGG	+	chr4_2:74375276-74375295	None:intergenic	30.0%
!!	TTTTATTTGGGTTTCTACGT+AGG	+	chr4_2:74375349-74375368	None:intergenic	30.0%
	TACGTAGAAACCCAAATAAA+AGG	-	chr4_2:74375348-74375367	Msa0622010:CDS	30.0%
	AAATATGATCATATAGAGGC+TGG	+	chr4_2:74375444-74375463	None:intergenic	30.0%
!!!	TTGTTTTTGATCCATGTCAT+AGG	-	chr4_2:74375535-74375554	Msa0622010:intron	30.0%
!!	GATATTTTTCAGCACATAAG+CGG	+	chr4_2:74375600-74375619	None:intergenic	30.0%
	TGAAAAATATCCTCACAACA+CGG	-	chr4_2:74375609-74375628	Msa0622010:CDS	30.0%
	ATTTAGAGACAAAGTAAGCA+AGG	+	chr4_2:74375730-74375749	None:intergenic	30.0%
	GTCTCTAAATTTGACAAAAC+AGG	-	chr4_2:74375740-74375759	Msa0622010:CDS	30.0%
	ACAATCACTTCCTCTAAATT+CGG	+	chr4_2:74376035-74376054	None:intergenic	30.0%
	CTGCTTCTTGATTATTAAAG+TGG	+	chr4_2:74376073-74376092	None:intergenic	30.0%
!	ATTCATCCTGAAGTTCTAAT+CGG	-	chr4_2:74376121-74376140	Msa0622010:CDS	30.0%
	TAACATCTTTGTCACGTTTA+GGG	+	chr4_2:74376149-74376168	None:intergenic	30.0%
	TTAACATCTTTGTCACGTTT+AGG	+	chr4_2:74376150-74376169	None:intergenic	30.0%
	ACTTAAAATCATCAAGGTCT+TGG	+	chr4_2:74376273-74376292	None:intergenic	30.0%
	ACTAGTACAACCATATAAGA+TGG	+	chr4_2:74376310-74376329	None:intergenic	30.0%
	TCTTGCAGAAAAAGGAAAAG+AGG	-	chr4_2:74375010-74375029	Msa0622010:three_prime_UTR	35.0%
	CTTGCAGAAAAAGGAAAAGA+GGG	-	chr4_2:74375011-74375030	Msa0622010:three_prime_UTR	35.0%
	GTGTAGTTGCTTATTGAAGT+GGG	+	chr4_2:74375167-74375186	None:intergenic	35.0%
	TGTGTAGTTGCTTATTGAAG+TGG	+	chr4_2:74375168-74375187	None:intergenic	35.0%
	TACACAATCTTCCACTTAGT+TGG	-	chr4_2:74375182-74375201	Msa0622010:three_prime_UTR	35.0%
	TCTTTCTTGTTGCTCATGAT+TGG	-	chr4_2:74375246-74375265	Msa0622010:CDS	35.0%
	CTTTCTTGTTGCTCATGATT+GGG	-	chr4_2:74375247-74375266	Msa0622010:CDS	35.0%
	TTTCTTGTTGCTCATGATTG+GGG	-	chr4_2:74375248-74375267	Msa0622010:CDS	35.0%
	CTACTATATCTGCAGATTTC+AGG	-	chr4_2:74375406-74375425	Msa0622010:CDS	35.0%
	TCACCTGTAATGAATTTCAC+TGG	+	chr4_2:74375942-74375961	None:intergenic	35.0%
!	ATGAAGGAGTATATACATGG+AGG	-	chr4_2:74375990-74376009	Msa0622010:CDS	35.0%
	GAGGAAGTGATTGTACAAAA+AGG	-	chr4_2:74376041-74376060	Msa0622010:CDS	35.0%
	AGTGATTGTACAAAAAGGAG+TGG	-	chr4_2:74376046-74376065	Msa0622010:CDS	35.0%
	GTGATTGTACAAAAAGGAGT+GGG	-	chr4_2:74376047-74376066	Msa0622010:CDS	35.0%
	TCTTGCAGAAAAAGGAAAAG+AGG	-	chr4_2:74375010-74375029	Msa0622010:three_prime_UTR	35.0%
	CTTGCAGAAAAAGGAAAAGA+GGG	-	chr4_2:74375011-74375030	Msa0622010:three_prime_UTR	35.0%
	GTGTAGTTGCTTATTGAAGT+GGG	+	chr4_2:74375167-74375186	None:intergenic	35.0%
	TGTGTAGTTGCTTATTGAAG+TGG	+	chr4_2:74375168-74375187	None:intergenic	35.0%
	TACACAATCTTCCACTTAGT+TGG	-	chr4_2:74375182-74375201	Msa0622010:three_prime_UTR	35.0%
	TCTTTCTTGTTGCTCATGAT+TGG	-	chr4_2:74375246-74375265	Msa0622010:CDS	35.0%
	CTTTCTTGTTGCTCATGATT+GGG	-	chr4_2:74375247-74375266	Msa0622010:CDS	35.0%
	TTTCTTGTTGCTCATGATTG+GGG	-	chr4_2:74375248-74375267	Msa0622010:CDS	35.0%
	CTACTATATCTGCAGATTTC+AGG	-	chr4_2:74375406-74375425	Msa0622010:CDS	35.0%
	TCACCTGTAATGAATTTCAC+TGG	+	chr4_2:74375942-74375961	None:intergenic	35.0%
!	ATGAAGGAGTATATACATGG+AGG	-	chr4_2:74375990-74376009	Msa0622010:CDS	35.0%
	GAGGAAGTGATTGTACAAAA+AGG	-	chr4_2:74376041-74376060	Msa0622010:CDS	35.0%
	AGTGATTGTACAAAAAGGAG+TGG	-	chr4_2:74376046-74376065	Msa0622010:CDS	35.0%
	GTGATTGTACAAAAAGGAGT+GGG	-	chr4_2:74376047-74376066	Msa0622010:CDS	35.0%
	CAACGATATCACCAACTAAG+TGG	+	chr4_2:74375196-74375215	None:intergenic	40.0%
!	TTTGGGTTTCTACGTAGGAA+GGG	+	chr4_2:74375344-74375363	None:intergenic	40.0%
!	ATTTGGGTTTCTACGTAGGA+AGG	+	chr4_2:74375345-74375364	None:intergenic	40.0%
	TTTACCTGGTTCCTATGACA+TGG	+	chr4_2:74375549-74375568	None:intergenic	40.0%
	GTCATAGGAACCAGGTAAAA+TGG	-	chr4_2:74375550-74375569	Msa0622010:intron	40.0%
!	ATCTCAGCTTCCATTTTACC+TGG	+	chr4_2:74375563-74375582	None:intergenic	40.0%
	ATCCTCACAACACGGAAAAT+TGG	-	chr4_2:74375617-74375636	Msa0622010:CDS	40.0%
	TTTGACAAAACAGGCTTCAC+TGG	-	chr4_2:74375749-74375768	Msa0622010:CDS	40.0%
	ACAAACAATCAGAGAGCTAC+AGG	+	chr4_2:74375802-74375821	None:intergenic	40.0%
	TCTCTGATTGTTTGTCTCCT+TGG	-	chr4_2:74375807-74375826	Msa0622010:intron	40.0%
	CTCTGATTGTTTGTCTCCTT+GGG	-	chr4_2:74375808-74375827	Msa0622010:intron	40.0%
!	CTTCTTTGTTTGCAGACTCT+GGG	-	chr4_2:74375878-74375897	Msa0622010:intron	40.0%
	AATGAATTTCACTGGCACCA+AGG	+	chr4_2:74375934-74375953	None:intergenic	40.0%
	GTGCCAGTGAAATTCATTAC+AGG	-	chr4_2:74375936-74375955	Msa0622010:intron	40.0%
	CATTACAGGTGAGCTAGATA+TGG	-	chr4_2:74375950-74375969	Msa0622010:CDS	40.0%
!	GGCATGAAGGAGTATATACA+TGG	-	chr4_2:74375987-74376006	Msa0622010:CDS	40.0%
!	AAGGAGTATATACATGGAGG+AGG	-	chr4_2:74375993-74376012	Msa0622010:CDS	40.0%
	TATACATGGAGGAGGAATGA+AGG	-	chr4_2:74376001-74376020	Msa0622010:CDS	40.0%
	CAACGATATCACCAACTAAG+TGG	+	chr4_2:74375196-74375215	None:intergenic	40.0%
!	TTTGGGTTTCTACGTAGGAA+GGG	+	chr4_2:74375344-74375363	None:intergenic	40.0%
!	ATTTGGGTTTCTACGTAGGA+AGG	+	chr4_2:74375345-74375364	None:intergenic	40.0%
	TTTACCTGGTTCCTATGACA+TGG	+	chr4_2:74375549-74375568	None:intergenic	40.0%
	GTCATAGGAACCAGGTAAAA+TGG	-	chr4_2:74375550-74375569	Msa0622010:intron	40.0%
!	ATCTCAGCTTCCATTTTACC+TGG	+	chr4_2:74375563-74375582	None:intergenic	40.0%
	ATCCTCACAACACGGAAAAT+TGG	-	chr4_2:74375617-74375636	Msa0622010:CDS	40.0%
	TTTGACAAAACAGGCTTCAC+TGG	-	chr4_2:74375749-74375768	Msa0622010:CDS	40.0%
	ACAAACAATCAGAGAGCTAC+AGG	+	chr4_2:74375802-74375821	None:intergenic	40.0%
	TCTCTGATTGTTTGTCTCCT+TGG	-	chr4_2:74375807-74375826	Msa0622010:intron	40.0%
	CTCTGATTGTTTGTCTCCTT+GGG	-	chr4_2:74375808-74375827	Msa0622010:intron	40.0%
!	CTTCTTTGTTTGCAGACTCT+GGG	-	chr4_2:74375878-74375897	Msa0622010:intron	40.0%
	AATGAATTTCACTGGCACCA+AGG	+	chr4_2:74375934-74375953	None:intergenic	40.0%
	GTGCCAGTGAAATTCATTAC+AGG	-	chr4_2:74375936-74375955	Msa0622010:intron	40.0%
	CATTACAGGTGAGCTAGATA+TGG	-	chr4_2:74375950-74375969	Msa0622010:CDS	40.0%
!	GGCATGAAGGAGTATATACA+TGG	-	chr4_2:74375987-74376006	Msa0622010:CDS	40.0%
!	AAGGAGTATATACATGGAGG+AGG	-	chr4_2:74375993-74376012	Msa0622010:CDS	40.0%
	TATACATGGAGGAGGAATGA+AGG	-	chr4_2:74376001-74376020	Msa0622010:CDS	40.0%
	AGGCATAGAACACAGAACAG+TGG	-	chr4_2:74374965-74374984	Msa0622010:three_prime_UTR	45.0%
	CACAGAACAGTGGAAGTGAA+TGG	-	chr4_2:74374975-74374994	Msa0622010:three_prime_UTR	45.0%
	CCATGAAGGAACAAGACTAC+TGG	+	chr4_2:74375038-74375057	None:intergenic	45.0%
!!	CCAGTAGTCTTGTTCCTTCA+TGG	-	chr4_2:74375035-74375054	Msa0622010:three_prime_UTR	45.0%
	GTTGCTCTCATAGACTCACT+TGG	-	chr4_2:74375212-74375231	Msa0622010:three_prime_UTR	45.0%
!	CATGATTGGGGTGCCTTAAT+TGG	-	chr4_2:74375260-74375279	Msa0622010:CDS	45.0%
!	ATTGGGGTGCCTTAATTGGT+TGG	-	chr4_2:74375264-74375283	Msa0622010:CDS	45.0%
!	ACGTAGGCTTTGACTCTTTC+AGG	+	chr4_2:74375308-74375327	None:intergenic	45.0%
	GGGACTACTAAGACAAACGT+AGG	+	chr4_2:74375324-74375343	None:intergenic	45.0%
	GATCACTTGCGTGATGTGTA+TGG	-	chr4_2:74375377-74375396	Msa0622010:CDS	45.0%
	TGATCCATGTCATAGGAACC+AGG	-	chr4_2:74375542-74375561	Msa0622010:intron	45.0%
	GAAGCTGAGATTGCTGAAGT+TGG	-	chr4_2:74375572-74375591	Msa0622010:CDS	45.0%
!	GACCAATTTTCCGTGTTGTG+AGG	+	chr4_2:74375622-74375641	None:intergenic	45.0%
	TCGTCTTCTGTAAGCCAAGA+GGG	+	chr4_2:74375707-74375726	None:intergenic	45.0%
!	GCTTCTTTGTTTGCAGACTC+TGG	-	chr4_2:74375877-74375896	Msa0622010:intron	45.0%
	GATATGGTGTACACTTCGCT+AGG	-	chr4_2:74375966-74375985	Msa0622010:CDS	45.0%
	GGAAGATGTGCCGAATTTAG+AGG	-	chr4_2:74376022-74376041	Msa0622010:CDS	45.0%
	AGGCATAGAACACAGAACAG+TGG	-	chr4_2:74374965-74374984	Msa0622010:three_prime_UTR	45.0%
	CACAGAACAGTGGAAGTGAA+TGG	-	chr4_2:74374975-74374994	Msa0622010:three_prime_UTR	45.0%
	CCATGAAGGAACAAGACTAC+TGG	+	chr4_2:74375038-74375057	None:intergenic	45.0%
!!	CCAGTAGTCTTGTTCCTTCA+TGG	-	chr4_2:74375035-74375054	Msa0622010:three_prime_UTR	45.0%
	GTTGCTCTCATAGACTCACT+TGG	-	chr4_2:74375212-74375231	Msa0622010:three_prime_UTR	45.0%
!	CATGATTGGGGTGCCTTAAT+TGG	-	chr4_2:74375260-74375279	Msa0622010:CDS	45.0%
!	ATTGGGGTGCCTTAATTGGT+TGG	-	chr4_2:74375264-74375283	Msa0622010:CDS	45.0%
!	ACGTAGGCTTTGACTCTTTC+AGG	+	chr4_2:74375308-74375327	None:intergenic	45.0%
	GGGACTACTAAGACAAACGT+AGG	+	chr4_2:74375324-74375343	None:intergenic	45.0%
	GATCACTTGCGTGATGTGTA+TGG	-	chr4_2:74375377-74375396	Msa0622010:CDS	45.0%
	TGATCCATGTCATAGGAACC+AGG	-	chr4_2:74375542-74375561	Msa0622010:intron	45.0%
	GAAGCTGAGATTGCTGAAGT+TGG	-	chr4_2:74375572-74375591	Msa0622010:CDS	45.0%
!	GACCAATTTTCCGTGTTGTG+AGG	+	chr4_2:74375622-74375641	None:intergenic	45.0%
	TCGTCTTCTGTAAGCCAAGA+GGG	+	chr4_2:74375707-74375726	None:intergenic	45.0%
!	GCTTCTTTGTTTGCAGACTC+TGG	-	chr4_2:74375877-74375896	Msa0622010:intron	45.0%
	GATATGGTGTACACTTCGCT+AGG	-	chr4_2:74375966-74375985	Msa0622010:CDS	45.0%
	GGAAGATGTGCCGAATTTAG+AGG	-	chr4_2:74376022-74376041	Msa0622010:CDS	45.0%
	CATCACTGTCTCCAAAGCCA+CGG	+	chr4_2:74375142-74375161	None:intergenic	50.0%
!	TACTTGCCGGTGGGAAGTAT+TGG	+	chr4_2:74375647-74375666	None:intergenic	50.0%
	ATACTTCCCACCGGCAAGTA+CGG	-	chr4_2:74375647-74375666	Msa0622010:CDS	50.0%
	GAATCCAGTTCCGTACTTGC+CGG	+	chr4_2:74375660-74375679	None:intergenic	50.0%
	GTACGGAACTGGATTCAACC+CGG	-	chr4_2:74375664-74375683	Msa0622010:CDS	50.0%
	TTCTGTAAGCCAAGAGGGCA+AGG	+	chr4_2:74375702-74375721	None:intergenic	50.0%
	GTCGTCTTCTGTAAGCCAAG+AGG	+	chr4_2:74375708-74375727	None:intergenic	50.0%
	GACAAAACAGGCTTCACTGG+AGG	-	chr4_2:74375752-74375771	Msa0622010:CDS	50.0%
!	AAGGTTTTCACTCCGGTCCA+TGG	+	chr4_2:74375915-74375934	None:intergenic	50.0%
	ATGGACCGGAGTGAAAACCT+TGG	-	chr4_2:74375914-74375933	Msa0622010:intron	50.0%
!	TGGCACCAAGGTTTTCACTC+CGG	+	chr4_2:74375922-74375941	None:intergenic	50.0%
	GTACACTTCGCTAGGCATGA+AGG	-	chr4_2:74375974-74375993	Msa0622010:CDS	50.0%
!!	AGGGCACCGATTAGAACTTC+AGG	+	chr4_2:74376130-74376149	None:intergenic	50.0%
	CATCACTGTCTCCAAAGCCA+CGG	+	chr4_2:74375142-74375161	None:intergenic	50.0%
!	TACTTGCCGGTGGGAAGTAT+TGG	+	chr4_2:74375647-74375666	None:intergenic	50.0%
	ATACTTCCCACCGGCAAGTA+CGG	-	chr4_2:74375647-74375666	Msa0622010:CDS	50.0%
	GAATCCAGTTCCGTACTTGC+CGG	+	chr4_2:74375660-74375679	None:intergenic	50.0%
	GTACGGAACTGGATTCAACC+CGG	-	chr4_2:74375664-74375683	Msa0622010:CDS	50.0%
	TTCTGTAAGCCAAGAGGGCA+AGG	+	chr4_2:74375702-74375721	None:intergenic	50.0%
	GTCGTCTTCTGTAAGCCAAG+AGG	+	chr4_2:74375708-74375727	None:intergenic	50.0%
	GACAAAACAGGCTTCACTGG+AGG	-	chr4_2:74375752-74375771	Msa0622010:CDS	50.0%
!	AAGGTTTTCACTCCGGTCCA+TGG	+	chr4_2:74375915-74375934	None:intergenic	50.0%
	ATGGACCGGAGTGAAAACCT+TGG	-	chr4_2:74375914-74375933	Msa0622010:intron	50.0%
!	TGGCACCAAGGTTTTCACTC+CGG	+	chr4_2:74375922-74375941	None:intergenic	50.0%
	GTACACTTCGCTAGGCATGA+AGG	-	chr4_2:74375974-74375993	Msa0622010:CDS	50.0%
!!	AGGGCACCGATTAGAACTTC+AGG	+	chr4_2:74376130-74376149	None:intergenic	50.0%
	AGAGTTCGGGGAAGCCATGA+AGG	+	chr4_2:74375052-74375071	None:intergenic	55.0%
	TTCATGGCTTCCCCGAACTC+TGG	-	chr4_2:74375051-74375070	Msa0622010:three_prime_UTR	55.0%
	TCCCCGAACTCTGGTACTCA+TGG	-	chr4_2:74375060-74375079	Msa0622010:three_prime_UTR	55.0%
	GCCATGAGTACCAGAGTTCG+GGG	+	chr4_2:74375064-74375083	None:intergenic	55.0%
	CGCCATGAGTACCAGAGTTC+GGG	+	chr4_2:74375065-74375084	None:intergenic	55.0%
	GCGCCATGAGTACCAGAGTT+CGG	+	chr4_2:74375066-74375085	None:intergenic	55.0%
	AACTGAGGGCCACAATCTGG+TGG	+	chr4_2:74375088-74375107	None:intergenic	55.0%
	ATTGTGGCCCTCAGTTCCCT+CGG	-	chr4_2:74375092-74375111	Msa0622010:three_prime_UTR	55.0%
	TCTCCAAAGCCACGGAGATC+GGG	+	chr4_2:74375134-74375153	None:intergenic	55.0%
	GTCTCCAAAGCCACGGAGAT+CGG	+	chr4_2:74375135-74375154	None:intergenic	55.0%
	GGTCCTCCAATACTTCCCAC+CGG	-	chr4_2:74375638-74375657	Msa0622010:CDS	55.0%
!!	TTGCCGGTGGGAAGTATTGG+AGG	+	chr4_2:74375644-74375663	None:intergenic	55.0%
	TCTGGGAGCTCACAACTCCA+TGG	-	chr4_2:74375895-74375914	Msa0622010:intron	55.0%
	GAGCTCACAACTCCATGGAC+CGG	-	chr4_2:74375900-74375919	Msa0622010:intron	55.0%
	AGAGTTCGGGGAAGCCATGA+AGG	+	chr4_2:74375052-74375071	None:intergenic	55.0%
	TTCATGGCTTCCCCGAACTC+TGG	-	chr4_2:74375051-74375070	Msa0622010:three_prime_UTR	55.0%
	TCCCCGAACTCTGGTACTCA+TGG	-	chr4_2:74375060-74375079	Msa0622010:three_prime_UTR	55.0%
	GCCATGAGTACCAGAGTTCG+GGG	+	chr4_2:74375064-74375083	None:intergenic	55.0%
	CGCCATGAGTACCAGAGTTC+GGG	+	chr4_2:74375065-74375084	None:intergenic	55.0%
	GCGCCATGAGTACCAGAGTT+CGG	+	chr4_2:74375066-74375085	None:intergenic	55.0%
	AACTGAGGGCCACAATCTGG+TGG	+	chr4_2:74375088-74375107	None:intergenic	55.0%
	ATTGTGGCCCTCAGTTCCCT+CGG	-	chr4_2:74375092-74375111	Msa0622010:three_prime_UTR	55.0%
	TCTCCAAAGCCACGGAGATC+GGG	+	chr4_2:74375134-74375153	None:intergenic	55.0%
	GTCTCCAAAGCCACGGAGAT+CGG	+	chr4_2:74375135-74375154	None:intergenic	55.0%
	GGTCCTCCAATACTTCCCAC+CGG	-	chr4_2:74375638-74375657	Msa0622010:CDS	55.0%
!!	TTGCCGGTGGGAAGTATTGG+AGG	+	chr4_2:74375644-74375663	None:intergenic	55.0%
	TCTGGGAGCTCACAACTCCA+TGG	-	chr4_2:74375895-74375914	Msa0622010:intron	55.0%
	GAGCTCACAACTCCATGGAC+CGG	-	chr4_2:74375900-74375919	Msa0622010:intron	55.0%
	CTCATGGCGCCACCAGATTG+TGG	-	chr4_2:74375076-74375095	Msa0622010:three_prime_UTR	60.0%
	GGGAACTGAGGGCCACAATC+TGG	+	chr4_2:74375091-74375110	None:intergenic	60.0%
	GTGGTAGCCGAGGGAACTGA+GGG	+	chr4_2:74375102-74375121	None:intergenic	60.0%
	CCAGTTCCGTACTTGCCGGT+GGG	+	chr4_2:74375656-74375675	None:intergenic	60.0%
	TCCAGTTCCGTACTTGCCGG+TGG	+	chr4_2:74375657-74375676	None:intergenic	60.0%
!!	GCAAGGTGTCAGGGGTATCC+GGG	+	chr4_2:74375685-74375704	None:intergenic	60.0%
!!	GGCAAGGTGTCAGGGGTATC+CGG	+	chr4_2:74375686-74375705	None:intergenic	60.0%
!	CCAAGAGGGCAAGGTGTCAG+GGG	+	chr4_2:74375693-74375712	None:intergenic	60.0%
!	GCCAAGAGGGCAAGGTGTCA+GGG	+	chr4_2:74375694-74375713	None:intergenic	60.0%
!	AGCCAAGAGGGCAAGGTGTC+AGG	+	chr4_2:74375695-74375714	None:intergenic	60.0%
	CTCATGGCGCCACCAGATTG+TGG	-	chr4_2:74375076-74375095	Msa0622010:three_prime_UTR	60.0%
	GGGAACTGAGGGCCACAATC+TGG	+	chr4_2:74375091-74375110	None:intergenic	60.0%
	GTGGTAGCCGAGGGAACTGA+GGG	+	chr4_2:74375102-74375121	None:intergenic	60.0%
	CCAGTTCCGTACTTGCCGGT+GGG	+	chr4_2:74375656-74375675	None:intergenic	60.0%
	TCCAGTTCCGTACTTGCCGG+TGG	+	chr4_2:74375657-74375676	None:intergenic	60.0%
!!	GCAAGGTGTCAGGGGTATCC+GGG	+	chr4_2:74375685-74375704	None:intergenic	60.0%
!!	GGCAAGGTGTCAGGGGTATC+CGG	+	chr4_2:74375686-74375705	None:intergenic	60.0%
!	CCAAGAGGGCAAGGTGTCAG+GGG	+	chr4_2:74375693-74375712	None:intergenic	60.0%
!	GCCAAGAGGGCAAGGTGTCA+GGG	+	chr4_2:74375694-74375713	None:intergenic	60.0%
!	AGCCAAGAGGGCAAGGTGTC+AGG	+	chr4_2:74375695-74375714	None:intergenic	60.0%
	CGTGGTAGCCGAGGGAACTG+AGG	+	chr4_2:74375103-74375122	None:intergenic	65.0%
	AGCTACGGCGTGGTAGCCGA+GGG	+	chr4_2:74375111-74375130	None:intergenic	65.0%
	GCCACGGAGATCGGGAGCTA+CGG	+	chr4_2:74375126-74375145	None:intergenic	65.0%
	GCTCCCGATCTCCGTGGCTT+TGG	-	chr4_2:74375128-74375147	Msa0622010:three_prime_UTR	65.0%
	CCCACCGGCAAGTACGGAAC+TGG	-	chr4_2:74375653-74375672	Msa0622010:CDS	65.0%
	CCCCTGACACCTTGCCCTCT+TGG	-	chr4_2:74375690-74375709	Msa0622010:CDS	65.0%
	CGTGGTAGCCGAGGGAACTG+AGG	+	chr4_2:74375103-74375122	None:intergenic	65.0%
	AGCTACGGCGTGGTAGCCGA+GGG	+	chr4_2:74375111-74375130	None:intergenic	65.0%
	GCCACGGAGATCGGGAGCTA+CGG	+	chr4_2:74375126-74375145	None:intergenic	65.0%
	GCTCCCGATCTCCGTGGCTT+TGG	-	chr4_2:74375128-74375147	Msa0622010:three_prime_UTR	65.0%
	CCCACCGGCAAGTACGGAAC+TGG	-	chr4_2:74375653-74375672	Msa0622010:CDS	65.0%
	CCCCTGACACCTTGCCCTCT+TGG	-	chr4_2:74375690-74375709	Msa0622010:CDS	65.0%
	GAGCTACGGCGTGGTAGCCG+AGG	+	chr4_2:74375112-74375131	None:intergenic	70.0%
	GGAGATCGGGAGCTACGGCG+TGG	+	chr4_2:74375121-74375140	None:intergenic	70.0%
	GCCGTAGCTCCCGATCTCCG+TGG	-	chr4_2:74375122-74375141	Msa0622010:three_prime_UTR	70.0%
	GAGCTACGGCGTGGTAGCCG+AGG	+	chr4_2:74375112-74375131	None:intergenic	70.0%
	GGAGATCGGGAGCTACGGCG+TGG	+	chr4_2:74375121-74375140	None:intergenic	70.0%
	GCCGTAGCTCCCGATCTCCG+TGG	-	chr4_2:74375122-74375141	Msa0622010:three_prime_UTR	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_2	gene	74374934	74376439	74374934	ID=Msa0622010;Name=Msa0622010
chr4_2	mRNA	74374934	74376439	74374934	ID=Msa0622010-mRNA-1;Parent=Msa0622010;Name=Msa0622010-mRNA-1;_AED=0.06;_eAED=0.06;_QI=26\|1\|1\|1\|1\|1\|3\|300\|319
chr4_2	exon	74374934	74375480	74374934	ID=Msa0622010-mRNA-1:exon:22403;Parent=Msa0622010-mRNA-1
chr4_2	exon	74375572	74375816	74375572	ID=Msa0622010-mRNA-1:exon:22402;Parent=Msa0622010-mRNA-1
chr4_2	exon	74375946	74376439	74375946	ID=Msa0622010-mRNA-1:exon:22401;Parent=Msa0622010-mRNA-1
chr4_2	five_prime_UTR	74376414	74376439	74376414	ID=Msa0622010-mRNA-1:five_prime_utr;Parent=Msa0622010-mRNA-1
chr4_2	CDS	74375946	74376413	74375946	ID=Msa0622010-mRNA-1:cds;Parent=Msa0622010-mRNA-1
chr4_2	CDS	74375572	74375816	74375572	ID=Msa0622010-mRNA-1:cds;Parent=Msa0622010-mRNA-1
chr4_2	CDS	74375234	74375480	74375234	ID=Msa0622010-mRNA-1:cds;Parent=Msa0622010-mRNA-1
chr4_2	three_prime_UTR	74374934	74375233	74374934	ID=Msa0622010-mRNA-1:three_prime_utr;Parent=Msa0622010-mRNA-1

Gene Sequence

>Msa0622010

ATGGAAGGCATAGAACACAGAACAGTGGAAGTGAATGGAATCAAAATGCATCTTGCAGAAAAAGGAAAAGAGGGACCAGTAGTCTTGTTCCTTCATGGCTTCCCCGAACTCTGGTACTCATGGCGCCACCAGATTGTGGCCCTCAGTTCCCTCGGCTACCACGCCGTAGCTCCCGATCTCCGTGGCTTTGGAGACAGTGATGCTCCCACTTCAATAAGCAACTACACAATCTTCCACTTAGTTGGTGATATCGTTGCTCTCATAGACTCACTTGGTGTTGATCAAGTCTTTCTTGTTGCTCATGATTGGGGTGCCTTAATTGGTTGGTATCTTTGTTTGTTTCGTCCTGAAAGAGTCAAAGCCTACGTTTGTCTTAGTAGTCCCTTCCTACGTAGAAACCCAAATAAAAGGATCATAGATCACTTGCGTGATGTGTATGGAGATGACTACTATATCTGCAGATTTCAGGAACCAGGTAAAATGGAAGCTGAGATTGCTGAAGTTGGCACCGCTTATGTGCTGAAAAATATCCTCACAACACGGAAAATTGGTCCTCCAATACTTCCCACCGGCAAGTACGGAACTGGATTCAACCCGGATACCCCTGACACCTTGCCCTCTTGGCTTACAGAAGACGACCTTGCTTACTTTGTCTCTAAATTTGACAAAACAGGCTTCACTGGAGGATTGAACTACTACAGAAACATAGACCTACTCTGGGAGCTCACAACTCCATGGACCGGAGTGAAAACCTTGGTGCCAGTGAAATTCATTACAGGTGAGCTAGATATGGTGTACACTTCGCTAGGCATGAAGGAGTATATACATGGAGGAGGAATGAAGGAAGATGTGCCGAATTTAGAGGAAGTGATTGTACAAAAAGGAGTGGGCCACTTTAATAATCAAGAAGCAGCATCAGAAATCAGTAAACACATTCACGAATTCATCCTGAAGTTCTAA

Protein sequence

>Msa0622010

MEGIEHRTVEVNGIKMHLAEKGKEGPVVLFLHGFPELWYSWRHQIVALSSLGYHAVAPDLRGFGDSDAPTSISNYTIFHLVGDIVALIDSLGVDQVFLVAHDWGALIGWYLCLFRPERVKAYVCLSSPFLRRNPNKRIIDHLRDVYGDDYYICRFQEPGKMEAEIAEVGTAYVLKNILTTRKIGPPILPTGKYGTGFNPDTPDTLPSWLTEDDLAYFVSKFDKTGFTGGLNYYRNIDLLWELTTPWTGVKTLVPVKFITGELDMVYTSLGMKEYIHGGGMKEDVPNLEEVIVQKGVGHFNNQEAASEISKHIHEFILKF*